ARTICLE 75 , et was CaM), 9@gmail. Exilicaulis . 2011, et al. 2011, et al. 1999, , especially (Visagie (Visagie et al. 2014), Key words: Citreovirdin cryptic species barcode DNA mites vector et al. 2008), but and nine of those , Penicillium P. (Houbraken BenA), calmodulin ( . This approach to species to approach This . Exilicaulis Lanata-Divaricata Torulomyces et al. 2013), and Torulomyces complex (Serra P. pagulum P. IMA FUNGUS · 7(1): 75–117 (2016) 75–117 7(1): · FUNGUS IMA , 3 and therefore we This paper follows previous papers (Visagie (Visagie species from Protea and apply GCPSR using phylogenies of et al. 2014c), P. citreonigrum P. P. hemitrachum P. genes. , Penicillium sect. Exilicaulis , and Karin Jacobs , and Karin et al. 2016a). 2 Exilicaulis et al. 2000) to Penicillium (Visagie (Visagie RPB2 During a survey of species diversity in the fynbos biome, importance of applying the Genealogical Concordance importance of applying the Genealogical (GCPSR) concept Phylogenetic Species Recognition (Taylor in studies focused on resolving the taxonomy of speci c in studies focused on resolving the taxonomy Houbraken sections (Houbraken & Samson 2011, et Visagie Rivera & Seifert 2011, 2014, Peterson et al. 2011, section in applied also was concept This 2013). al. of species from the but the focus was mostly on a subset parvum-clade (Langlois et al. 2014, Peterson P. and the 2011) delineation has become standard in did not include all species belonging to these clades. Africa, Penicillium Cape of South situated in the Western one of the dominant genera isolated, with roughly 61 species 61 roughly with isolated, genera dominant the of one section to belong Fourteen found. represent new species. Here we compare the morphology of these new species with all others previously classi ed in section region (ITS), -tubulin ( the rDNA and al. 2015), Sclerotiora (Visagie reporting new Penicillium species isolated during this survey belonging to sections Aspergilloides Citrina P. cravenianum P. , including nine new nine new Exilicaulis , including sect. , , P. P. spp. nov. , species, revealed 52 distinct species, including nine new species, revealed 52 distinct , Robert A. Samson , Robert 2 P. consobrinum P. Exilicaulis , et al. 2010, et al. 1989, Exilicaulis was rede ned , stressing the sect. P. corylophilum P. 1999, 2011), but et al. 1999, 2011), , Jos Houbraken 1 Exilicaulis Exilicaulis et al. 2014, Miyake 1940, species in cork bark with based on phylogenetic data et al. 1999, Rosa et al. 1992). Serra et al. (2008) . With a limited strain and species is the correct name for the clade previously considered to represent citreosulfuratum is the correct name for the clade previously P. (RNA polymerase II second largest (RNA has received some taxonomic , Keith A. Seifert , Keith
1,2,3 RPB2 clade (containing biverticillate species), et al. 2002, McMullin Exilicaulis Serra et al. (2008). P. xanthomelinii subturcoseum, and P. momoii, P. , P. phylogeny revealing a well-supported main A survey of the fynbos biome in South Africa resulted in the isolation of 61 Africa resulted in the isolation fynbos biome in South survey of the A
et al. 2002, Peterson you or your use of the work). that they endorse must attribute the work in the manner speci ed by the author or licensor (but not in any way that suggests You 2011, Yoshida Yoshida et al. 2011,
P. raciborskii and P. infructescences, air, and soil samples. Fourteen of these belong to Penicillium belong these of Fourteen samples. soil and air, infructescences, The nine new species are: Penicillium atrolazulinum Section CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, NL-3584 CT Utrecht, The Netherlands Utrecht, 8, NL-3584 CT Fungal Biodiversity Centre, Uppsalalaan CBS-KNAW Africa Stellenbosch 7600, South University of Stellenbosch, Private Bag X1, Department of Microbiology, Biodiversity (Mycology), Agriculture and Agri-Food Canada, Ottawa, ON K1A0C6, Canada; corresponding author e-mail: cobusvisagie K1A0C6, Canada; corresponding author e-mail: Agri-Food Canada, Ottawa, ON Agriculture and Biodiversity (Mycology), P. repensicola P. Accepted: 15 May 2016; Published: 1 June 2016. Article info: Submitted: 12 November 2015; considered it an opportunity to re-evaluate the taxonomy of the section. Phylogenetic comparisons of the ITS, -tubulin, Phylogenetic comparisons of the ITS, -tubulin, to re-evaluate the taxonomy of the section. considered it an opportunity section calmodulin and RPB2 gene regions of the 76 ^ species from fynbos. Morphological comparisons con rmed the novelty for most of these, however, new species closely for most of these, however, comparisons con rmed the novelty species from fynbos. Morphological and we thus placed a bias on differences rubefaciens did not show signi cant or consistent morphological related to P. Concordance Phylogenetic Species Recognition (GCPSR) concept. In this phylogenetic data applying the Genealogical update the accepted species list and resolve synonyms in the section. paper we describe the nine new species and we reveal that Importantly, repens com Abstract: © 2016 International Mycological Association © 2016 International Mycological distribute and transmit the work, under the following conditions: are free to share - to copy, You Attribution: species from fynbos in South Africa in South from fynbos species 2 3 1 Cobus M. Visagie Cobus M. A phylogenetic revision of Penicillium revision phylogenetic A Non-commercial: No derivative works: Any of the above conditions can be waived if you get For any reuse or distribution, you must make clear to others the license terms of this work, which can be found at http://creativecommons.org/licenses/by-nc-nd/3.0/legalcode. transform, or build upon this work. may not alter, You purposes. may not use this work for commercial You Nothing in this license impairs or restricts the author’s moral rights. permission from the copyright holder. doi:10.5598/imafungus.2016.07.01.06 corylophilum whereas monoverticillate species resolved in several basal clades. more importantly species and their metabolites were shown human health (Kremer to be toxic and to affect Lyratzopoulos a focus on some species of sect. subunit) attention in recent years, including the introduction of new species (Langlois et al. 2014, Peterson studied the diversity of Penicillium Pitt (1980) introduced the name Penicillium restrictum, for species with monoverticillate typi ed by P. recent the In stipes. non-vesiculated and conidiophores re-classi cation of Penicillium Ohnishi Unoura INTRODUCTION VOLUME 7 · NO. 1 (Houbraken & Samson 2011), section 2011), Samson & (Houbraken to include biverticillate species such as melinii, species separated (2011) Samson & Houbraken sampling, This was also supported by a more into two main clades. comprehensive Visagie et al.
MATERIAL AND METHODS Fynbos strains isolated during this study were added to a se uence database that includes all ex-type strains of Sampling and isolation species belonging to section Exilicaulis. All data sets were Soil, air and Protea repens infructescence samples were taken aligned using MAFFT v. 7.164b (Katoh & Standley 2013) from three fynbos sampling sites at Stellenbosch (33°56’47”S implementing the L-INS-i option. For multigene phylogenies,
ARTICLE 18°52’49”E), Riverlands (33°29’46”S 18°35’60”E), and aligned data sets for each gene or region were concatenated Struisbaai (33°45’06”S 18°58’59”E). Potato dextrose agar in SeaView v. 4.4.1 (Gouy et al. 2010). (PDA) containing streptomycin (100 ppm), chloramphenicol Phylogenies were constructed using both Maximum (50 ppm) and dichloran (0.002 g/L) was used as isolation Likelihood (ML) and Bayesian tree inference (BI) analyses. ML medium. Isolation plates were incubated at 25 °C for 7 d, analyses were done using MEGA v. 6.06 (Tamura et al. 2013). after which colonies resembling Penicillium were transferred The most suitable model for each data set was selected based to oatmeal agar (OA). on the lowest Akaike information criterion (AIC) value in MEGA. Isolations from soil were made using a dilution series ML analyses were run by calculating an initial Bio-Neighbour-
by adding 5 g soil to 100 mL dH2O and diluting this tenfold Joining tree, followed by a Heuristic search with the Nearest- three times resulting in suspensions 10-1, 10-2 and 10-3 of the Neighbour-Interchange (NNI) option. Bootstrap analysis with original. In triplicate, 1 mL from each dilution was spread onto 1000 replicates was used to represent support for nodes. For PDA plates. Isolations from Protea repens infructescences BI, the most suitable model for each data set was selected included sampling from bracts and mite populations. Firstly, in MrModeltest v. 2.3 (Nylander et al. 2004) based on the infructescences were cut open and the mites shaken onto lowest AIC value. Subse uent analyses were run in MrBayes 1 % water agar plates with chloroform used to temporarily v. 3.2.1 (Ron uist & Huelsenbeck 2003) using three sets of sedate mites. Mites were transferred onto PDA plates using a four chains (one cold and three heated) and stopped when ne needle and incubated on a lab bench (± 21 °C) on soapy the average standard of deviation for split fre uencies reached water traps to prevent cross contamination by awaken mites 0.01. The sample fre uency was then set at 100 and 25 % of roaming on plates. Roughly 15 bracts from infructescences trees were removed as burn-in. ML phylograms were used for
were suspended in 100 mL dH2O. This solution was diluted representing phylogenies obtained from ML and BI analyses, tenfold six times resulting in suspensions 10-4, 10-5 and 10-6 with bootstrap values ( 80 %) and/or posterior probabilities ( of the original and spread plates prepared similarly to the soil 0.95 pp) both indicated above thickened branches. spread plates. Air was sampled close to the same sampled Protea repens bushes using a MAS-Eco® air sampler set to Morphology a volume of 50 L. Fynbos strains were characterised on Czapek yeast autolysate agar (CYA), Blakeslee’s malt extract agar (MEA; Bacto), Reference strains yeast extract sucrose agar (YES), 25 % glycerol nitrate agar Reference strains used for this study (Table 1), were (G25N), and creatine sucrose agar (CREA), incubated at 25 obtained from the public collection of CBS (CBS-KNAW °C for 7 d, with additional CYA plates incubated at 30 and 37 Fungal Biodiversity Centre, Utrecht) and cultures from the °C. CREA contains bromocresol purple and is used as a rapid working collection of the Applied and Industrial Mycology method for detecting acid production by colonies, indicated by group at the same institute (DTO). Strains isolated during a colour change in the medium from purple to yellow (Frisvad this study are kept in a private collection at the department 1981). Media preparation, inoculation techni ue, incubation of Microbiology, Stellenbosch University, South Africa (CV). conditions and microscope preparations were standardised These strains were also deposited in DTO, with a subset according to the recommended methods published in of strains deposited into DAOMC (Canadian Collection of Visagie et al. (2014b). Colour names and codes used in Fungal Cultures, Ottawa) and CBS. descriptions are based on Kornerup & Wanscher (1967). An Olympus SZX12 dissecting microscope and Olympus DNA extraction, sequencing and phylogenetic BX50 light microscope e uipped with an Evolution MP digital analysis microscope camera and ImagePro v. 6.0 software were used DNA was extracted from strains grown on MEA for 7 d for microphotography. Photographic plates were prepared in using the ZR Fungal/Bacterial DNA kit (ZymoResearch, Adobe Photoshop CS6. CA), with extracts stored at 4 °C. Ampli cation of the ITS region, partial -tubulin (BenA), calmodulin (CaM), and RNA polymerase II second largest subunit (RPB2) were RESULTS made using primers and ampli cation pro les described in Visagie et al. (2014b). PCR and se uencing reactions Sampling and isolations followed similar methods to Visagie et al. (2013). For Penicillium sect. Exilicaulis was the dominant group isolated some strains, the partial RPB2 gene was se uenced using from the fynbos, with 740 isolates accounting for roughly internal se uencing primers RPB2Int388F and RPB2Int- 43 % of the total obtained. Strains belonging to the section 527R as described in Houbraken & Samson (2011). were sorted into morpho-groups based on colony characters Se uence contigs were assembled using CodonCode on CYA and MEA, with a subset of strains from each group Aligner v. 4.0.1 (CodonCode Centerville, MA, USA). Newly subse uently se uenced and compared with reference generated se uences were deposited in GenBank with se uences. The dominance of P. citreosulfuratum (197 accession numbers provided in Table 1. isolates in total, with only three each from air and soil) and
76 IMA FUNGUS Penicillium sect. Exilicaulis ARTICLE JX141105 JX157457 KP064598 JX141103 JX157456 KP064597 JX141102 JX157450 KP064596 JX141095 JX157442 KP064590 JX141096 JX157443JX141100 KP064591 JX141101 JX157448 JX157449 KP064594 KP064595 JX141091JX141092 JX157437 JX157438 KP064586 KP064587 JX141093JX141094 JX157439 JX157440 KP064588 KP064589 JX141097 JX157444 KP064592 JX141086JX141087 JX157432 JX157433 KP064582 JX141088 KP064583 JX141089 JX157434 JX157435 KP064584 KP064585 JX141084 JX157430 KP064581 JX141083 JX157429 KP064580 BenA CaM RPB2 JX141082 JX157427 KP064579 JX141081 JX157425 KP064578 JX141118 JX157512 KP064604 JX141080 JX157424 KP064577 JX141099 JX157446JX141115JX141117 JX157502 KP064593 JX157505 KP064602 KP064603 JX141079 JX157423 KP064576 GenBank accession numbers ITS KC411758 KP016750 KP016770 KP064574 AF033454 KJ834430 KP016768 JN121489 JX140913 JX141077 JX157416 KP064575 infructescens, Stellenbosch, South Africa infructescens, Stellenbosch, South n.a. infructescens, Stellenbosch, South Africa infructescens, Stellenbosch, South n.a. infructescens, Stellenbosch, South Africa infructescens, Stellenbosch, South n.a. infructescens, Stellenbosch, South Africa infructescens, Stellenbosch, South n.a. infructescens, Stellenbosch, South Africa infructescens, Stellenbosch, South n.a. infructescens, Stellenbosch, South Africa infructescens, Stellenbosch, South n.a. infructescens, Stellenbosch, South Africa infructescens, Stellenbosch, South n.a. infructescens, Stellenbosch, South Africa infructescens, Stellenbosch, South n.a. infructescens, Stellenbosch, South Africa infructescens, Stellenbosch, South n.a. infructescens, Stellenbosch, South Africa infructescens, Stellenbosch, South n.a. infructescens, Stellenbosch, South Africa infructescens, Stellenbosch, South n.a. infructescens, Struisbaai, South Africa infructescens, Struisbaai, South n.a. infructescens, Stellenbosch, South Africa infructescens, Stellenbosch, South n.a. infructescens, Stellenbosch, South AfricaProtea repens infructescens, Stellenbosch, South n.a. infructescens, Stellenbosch, South AfricaProtea repens infructescens, Stellenbosch, South n.a. infructescens, Stellenbosch, South AfricaProtea repens infructescens, Stellenbosch, South n.a. infructescens, Stellenbosch, South AfricaProtea repens infructescens, Stellenbosch, South n.a. infructescens, Stellenbosch, South AfricaProtea repens infructescens, Stellenbosch, South n.a. infructescens, Stellenbosch, South AfricaProtea repens infructescens, Stellenbosch, South n.a. infructescens, Stellenbosch, South AfricaProtea repens infructescens, Stellenbosch, South n.a. AfricaProtea repens infructescens, Stellenbosch, South n.a. AfricaProtea repens infructescens, Stellenbosch, South n.a. infructescens, Stellenbosch, South AfricaProtea repens infructescens, Stellenbosch, South n.a. infructescens, Struisbaai, South AfricaProtea repens infructescens, Struisbaai, South AfricaProtea repens infructescens, Struisbaai, South n.a. n.a. infructescens, Stellenbosch, South AfricaProtea repens infructescens, Stellenbosch, South n.a. Protea repens Protea repens Protea repens Protea repens Protea repens Protea repens Protea repens Protea repens Protea repens Protea repens Protea repens Protea repens Protea repens Mite from Mite from Bract from Mite from Bract from Mite from Bract from Bract from Bract from Mite from Bract from Bract from Bract from Mite from Bract from Mite from Mite from Mite from Mite from Mite from Substrate, Location Soil, Pretoria region, South Africa; ex-type Soil, Pretoria region, South Soil, Syria; ex-type AfricaBract from Protea repens infructescens, Struisbaai, South JX140907 JX141114 JX157501 KP064601 Bract from Bract from Bract from Mite from Bract from Mite from DTO 185-C1 = CV 644 DTO DTO 185-B9 = CV 635 DTO DTO 184-H5 = CV 307 DTO DTO 184-H6 = CV 332 DTO 184-I4 = CV 458 DTO 185-A2 = CV 500 DTO DTO 184-G9 = CV 264 DTO 184-H1 = CV 278 DTO DTO 184-H2 = CV 282 DTO 184-H3 = CV 285 DTO DTO 184-I2 = CV 438 DTO DTO 184-G2 = CV 197 DTO 184-G4 = CV 199 DTO 184-G7 = CV 235 DTO 184-G8 = CV 252 DTO DTO 184-G1 = CV 180 DTO DTO 184-F9 = CV 176 DTO DTO 184-F8 = CV 173 DTO DTO 184-F6 = CV 152 DTO DTO 184-F4 = CV 139 DTO CBS 139174 = DTO 184-H9 = CV 365 CBS 139174 = DTO CBS 139177 = DTO 186-D7 = CV 1791 CBS 139177 = DTO 186-E3 = CV 1854 CBS 139178 = DTO 186-G9 = CV 2025 CBS 139182 = DTO CBS 317.67 = ATCC 18542 = FRR 1158 = IFO 31728 18542 = FRR 1158 ATCC CBS 317.67 = = IMI 136243 22347 = DSM2205 FRR 507 ATCC CBS 414.69 = IMI 140335 = VKMF-1077 180-H4 = CV 55CBS 139136 = DAOM 241083 DTO Africa; ex-type Air sample, Stellenbosch, South 183-D7 = CV CBS 139164 = DAOM 241085 DTO 1778 184-E8 = CV 125 CBS 139172 = DTO 184-F3 = CV 137 CBS 139173 = DTO P. atrolazulinum P. P. atrolazulinum P. P. atrolazulinum P. P. atrolazulinum P. atrolazulinum P. atrolazulinum P. P. atrolazulinum P. atrolazulinum P. P. atrolazulinum P. atrolazulinum P. P. atrolazulinum P. P. atrolazulinum P. atrolazulinum P. atrolazulinum P. atrolazulinum P. P. atrolazulinum P. P. atrolazulinum P. P. atrolazulinum P. P. atrolazulinum P. P. atrolazulinum P. Table 1 . Strains used in this study. Table Species name Collection numbers atrolazulinum P. P. atrolazulinum P. atrolazulinum P. atrolazulinum P. P. alutaceum P. arabicum P. atrolazulinum P. atrolazulinum P. atrolazulinum P. atrolazulinum P.
VOLUME 7 · NO. 1 77 Visagie et al. ARTICLE BenA CaM RPB2 JX141063 JX157473 KP064611 JX141057 JX157421 KP064608 JX141112 JX157498 KP064600 JX141119 JX157513 KP064605 JX141056 JX157420 KP064644 JX141106 JX157458 KP064599 GenBank accession numbers AF033456 EF198621 EF198628EF198647 JN121474 EF198623KP016812 KP016778 KP016749 KP064616 KP016769 KP064573 AF033455 JX141041 JX157405 KP064614 ITS KP016811 KP016748 KP016767 KP064572 KC411700 KJ834442 KP125335 JN406608 EF198646 EF198622 EF198626 EF198501 KP016817 JX141059KP016819 JX157464 JX141060KP016816 KP064661 JX157467 JX141061n.a. KP064609 JX157468KP016818 KP064610 JX141064 JX157474n.a. KP064612 KC411736 KJ834437KC411754 KP016772 KJ834438 JN406572 KP016774 JN121504 n.a. JX140928JX140930 JX141054 JX141055 JX157417 JX157419 KP064643 KP064607 and P. infructescens, Struisbaai, South Africa infructescens, Struisbaai, South n.a. infructescens, Struisbaai, South AfricaProtea repens infructescens, Struisbaai, South n.a. infructescens, Stellenbosch, South AfricaProtea repens infructescens, Stellenbosch, South n.a. Protea repens Unknown; ex-type Ukraine; ex-type Forest soil, Kiev, citreonigrum Rotting stem, Belgium; ex-type of P. subcinearum citreoviride Military e uipment, Florida, USA; ex-type of P. aeneum Soil, Japan; ex-type of P. Soil, Ukraine; ex-type Unknown Substrate, Location Africa South Soil, Malmesbury, Africa South Soil, Malmesbury, Africa South Soil, Malmesbury, Africa South Soil, Malmesbury, Triticum aestivum in silo, Prague, Czech Republic; ex-typeTriticum JN617706Africa; ex-type Desert soil, Upington, South KJ834435 KP016771 JN406557 Africa South Soil, Malmesbury, Africa Soil, Stellenbosch, South Bract from Africa Soil, Stellenbosch, South Soil, Burgos, Spain; ex-type Ilial bone lesion in Rhodesian ridgeback dog, USA; ex-type KJ511291 KF900167 KF900177 KF900196 Bract from Mite from NRRL 748 = ATCC 48693 = BIOURGE 90 FRR 748 ATCC 748 = NRRL Thom 4733.34 IMI 92234 = QM 7555 22350 = FRR 3390 IJFM 5024 ATCC CBS 222.66 = = VKMF-856 = IMI 113676 48736 = FRR 761 IMI 092209 ATCC CBS 258.29 = 29062 28648 = MUCL 98 = MUCL 20 = LSHBP LSHBP 761 = NRRL 29116 = MUCL 10425 = FRR 2046 IMI 040575 ATCC CBS 308.48 = 2046 = NRRL = IFO 6224 IMI 18308 = FAT123 ATCC CBS 321.59 = 3404 = QM 7290 068225 = NRRL 1187 NRRL CBS 219.66 = ATCC 18322 = ATCC 18329 = FRR ATCC 18322 = ATCC CBS 219.66 = 3393 = VKMF-1037 CBS 139171 = DTO 184-E6 = CV 101 CBS 139171 = DTO DTO 186-H9 = CV 2222 DTO 182-C3 = CV CBS 139149 = DAOM 241052 DTO 896 182-C5 = CV CBS 139150 = DAOM 241055 DTO 900 182-E1 = CV CBS 139152 = DAOM 241058 DTO 943 182-E3 = CV CBS 139153 = DAOM 241051 DTO 948 184-E4 = CV 96 CBS 139170 = DTO CBS 380.75 = FRR 1726 IMI 197488 CBS 325.89 62798 NRRL 18543 = CSIR 1097 IFO 31774 ATCC CBS 352.67 = = IMI 136241 180-I4 = CV 90CBS 139137 = DAOM 241050 DTO Africa Soil, Stellenbosch, South 180-I6 = CV 93CBS 139139 = DAOM 241054 DTO Africa Soil, Stellenbosch, South 182-B6 = CV CBS 139148 = DAOM 241057 DTO 872 DTO 185-D1 = CV 777 DTO 186-D2 = CV 1736 DTO P. cinerascens P. cinereoatrum P. citreonigrum P. citreonigrum P. citreonigrum P. citreonigrum P. P. chalabudae P. P. cf restrictum P. Table 1. (Continued). Table Species name Collection numbers atrolazulinum P. cf restrictum P. cf restrictum P. cf restrictum P. cf restrictum P. cf restrictum P. P. atrosanguineum P. burgense P. canis P. catenatum P. cf restrictum P. cf restrictum P. cf restrictum P. P. atrolazulinum P. atrolazulinum P.
78 IMA FUNGUS Penicillium sect. Exilicaulis ARTICLE JX141145JX141146 JX157483 JX157486 KP064629 KP064630 JX141143 JX157472 KP064627 JX141142 JX157470 KP064626 JX141140 JX157466 KP064624 BenA CaM RPB2 JX141139 JX157465 KP064623 JX141136 JX157461JX141137 KP064620 JX157462 KP064621 GenBank accession numbers KC411712 KP016751 KP016773 KP064606 KP016813 KP016752JN617696 KP016776 KP016756 KP064613 KP016787 KP064645 KP016815 KP016761 KP016797 KP064654 n.a. n.a. n.a. ITS JX140890 JX141141 JX157469 KP064625 n.a. JX140888 JX141135JX140889 JX157453 JX141138 KP064619 JX157463 KP064622 n.a. n.a. JX140891 JX141144 JX157477 KP064628 KP016814 KP016753 KP016777 KP064615 JX140935 JX141164 JX157536 KP064677 JX140937 JX141162 JX157415 KP064675 P. humuli P. infructescens, Malmesbury, South Africa South infructescens, Malmesbury, n.a. infructescens, Stellenbosch, South Africa infructescens, Stellenbosch, South JX140887 JX141134 JX157447 KP064618 P. candidofulvum P. P. chloroleucon P. P. obscurum P. P. toxicarium Miyake Serra et al . (2008)P. EF198650 EF198620 EF198631 EF198499 P. toxicarium Miyake Serra et al . (2008)P. EF198660 EF198614 EF198641 EF198486 Weihenstephan, Germany; ex-type of Weihenstephan, infructescens, Malmesbury, South Africa South Protea repens infructescens, Malmesbury, n.a. infructescens, Stellenbosch, South AfricaProtea repens infructescens, Stellenbosch, South JX140943 JX141163Africa South Protea repens infructescens, Malmesbury, JX157441 JX140939Africa South Protea repens infructescens, Malmesbury, KP064676 JX140940 JX141167AfricaProtea repens infructescens, Struisbaai, South JX157485 JX141168 JX140942 KP064678 JX157492 JX141169 KP064679 JX157537 KP064680 Protea repens Protea repens Humulus lupulus, Unknown; ex-type of Bract from Mite from Unknown; ex-type of Soil, Malmesbury, South Africa South Soil, Malmesbury, Soil, Malmesbury, South Africa South Soil, Malmesbury, Soil, Malmesbury, South Africa South Soil, Malmesbury, Soil, Stellenbosch, South Africa; ex-type Soil, Stellenbosch, South Africa South Air sample, Malmesbury, Air sample, Malmesbury, South Africa South Air sample, Malmesbury, Africa South Air sample, Malmesbury, Africa South Soil, Malmesbury, Soil, Malmesbury, South Africa South Soil, Malmesbury, Substrate, Location Unknown, Strain of Air sample, Stellenbosch, South Africa Air sample, Stellenbosch, South Bract from Africa South Soil, Malmesbury, Bract from Bract from Bract from Unknown; ex-type Unknown, Strain of CBS 231.38 = ATCC 10452 = IFO 7726 IMI 039817 ATCC CBS 231.38 = 872 = NRRL 28669 12 = MUCL CBS 254.37 = IMI 092201 LSHBP 769 = NRRL CBS 127808 = NRRL 799 = IMI 92202 CBS 127808 = NRRL DTO 186-A6 = CV 1457 DTO 793 = FRR CBS 127807 = IMI 92263 NRRL Unknown; ex-type of DTO 185-I4 = CV 1095 DTO DTO 185-G3 = CV 941 DTO DTO 185-F5 = CV 917 DTO DTO 185-E5 = CV 894 DTO CBS 139144 = DAOM 241072 = DTO 181-H9 = CV CBS 139144 = DAOM 241072 DTO 547 182-B5 = CV CBS 139147 = DAOM 241073 DTO 865 CBS 139155 = DAOM 241075 = DTO 182-F5 = CV 977CBS 139155 = DAOM 241075 DTO Africa South Soil, Malmesbury, 185-D4 = CV 815 DTO 185-D5 = CV 817 DTO 185-E2 = CV 888 DTO CBS 139151 = DAOM 241074 = DTO 182-C9 = CV CBS 139151 = DAOM 241074 DTO 911 CBS 139141 = DAOM 241071 = DTO 181-F8 = CV 436CBS 139141 = DAOM 241071 DTO Mite from NRRL 6172 NRRL CBS 139135 = DTO 180-G1 = CV 11 CBS 139135 = DTO 181-E1 = CV 283 CBS 139140 = DTO 183-B2 = CV 1454 CBS 139158 = DTO 31271 NRRL CBS 139156 = DTO 182-G3 = CV 1000 CBS 139156 = DTO 183-C5 = CV 1532 CBS 139162 = DTO 183-G2 = CV 2015 CBS 139165 = DTO 290-I4 IMI 92228 = DTO P. corylophilum P. corylophilum P. P. corylophilum P. P. consobrinum P. corylophilum P. P. consobrinum P. P. consobrinum P. P. consobrinum P. P. consobrinum P. P. consobrinum P. consobrinum P. P. consobrinum P. consobrinum P. consobrinum P. consobrinum P. P. consobrinum P. P. consobrinum P. P. citreosulfuratum P. Table 1. (Continued). Table Species name Collection numbers P. citreosulfuratum P. citreosulfuratum P. citreosulfuratum P. citreosulfuratum P. P. citreosulfuratum P. citreosulfuratum P. citreosulfuratum P. citreosulfuratum P.
VOLUME 7 · NO. 1 79 Visagie et al. ARTICLE BenA CaM RPB2 GenBank accession numbers AY494856 n.a. n.a. n.a. AF033450 JX141042 KP016780 KP064631 HQ646592 HQ646576FJ231002 HQ646587 KP064639 JX141047 JX157525 KP064641 ITS KC411717 KP016754 KP016779 KP064617 EF422848 EF506213 EF506232 KP064638 FJ231003 JX141048 JX157526 KP064642 AF033458 KP016757 KP016788 KP064646 FJ230997FJ230996 JX141044FJ230998 JX157523 JX141045 JX157522 KP064633 JX141043 JX157521 KP064634 AY157490 KP064632 KJ834446 KP016782 JN406601 AF033464 HQ646566 EU427281 JN121490 JX140916KC411702 JX141046 KJ834455 JX157475 KP016786 KP064640 JN406605 AF081804 KJ834448 KP016783 JN121517 EF422849 KP016758KF667369 KP016789 KF667365 KP064647 KF667367 KF667371 JX140900 JX141076 JX157418 KP064636 , Dravuni, versluyii P. citreovirens strainP. GU944557 GU944519 GU944607 JN406569 P. citreovirens and P. Dictosphaeria ) on Andosol soil, Spain; ex-type) on AF481124 KJ834449 KP016784 JN406540 P. corylophilum P. Fagus sylvatica Acidic dune sand, Dorset, England; ex-type Soil, Utah, USA; ex-type Africa South Soil, Malmesbury, Africa; ex-type South Soil, Malmesbury, Unknown source, Florida, USA; ex-type Australia; ex-type Tooraddin, Mangrove swamp soil, Fiji; ex-type Africa; ex-type Nursery soil, Pretoria, South Fallen leaf ( Soil, Shennongjia, China; ex-type Soil, Katanga, DR Congo; ex-type Maize- eld soil, Záporo ská district, Ukraine; ex-type Soil, Malmesbury, South Africa South Soil, Malmesbury, Soil, Malmesbury, South Africa South Soil, Malmesbury, Africa South Soil, Malmesbury, Astrolabe Reed from Great Substrate, Location Unknown; ex-type of Air sample, Barcelona, Spain; authentic Forest soil, Thailand; ex-type Forest soil, P. coeruleoviride Litter of Betula , UK; ex-type P. CBS 277.58 = ATCC 18239 = FRR 2671 IFO 8175 ATCC CBS 277.58 = 2671 = QM 7523 IMI 071626 = LSHBB323 NRRL 48734 = FRR 907 ATCC 907 = = NRRL CBS 141171 Thom 4894.16 180-D7 = CV CBS 139133 = DAOM 241097 DTO 2844 180-D8 = CV CBS 139134 = DAOM 241098 DTO 2845 182-F1 = CV 964CBS 139154 = DAOM 241099 DTO Africa South Soil, Malmesbury, CBS 226.89 DTO 180-E4 = CV 2853 DTO DTO 180-E5 = CV 2854 DTO 184-C9 = CV 2852 DTO 180-I5 = CV 92CBS 139138 = DAOM 241082 DTO Africa; ex-type Soil, Stellenbosch, South 29107 CBS 230.81 = FRR 741 IMI 190875 MUCL 741 = NRRL ATCC 22783 = ATCC 5207 = CBS 456.70 = NRRL = IMI 149680 52501 = FRR 1120 BPI 844248 CBS 318.67 = ATCC 18544 = CSIR 1040 FRR 814 ATCC CBS 318.67 = 6223 IFO 31734 = IMI 136204 NRRL CBS 689.77 = CCMF-696 IJFM 3049 IMI 253806 VKMF-2178 18388 = IMI 136206 NRRL ATCC CBS 247.67 = 5182 18387 = FRR 3381 IJFM 5045 ATCC CBS 625.67 = 3381 = VKMF-1244 = IMI 129965 NRRL 12727 = NBRC 109724 CBS 136665 = KY CBS 330.79 = IJFM 5147 CBS 312.48 = TCC9784 = ATHUM2890 = CECT 2270 = CECT ATHUM2890 TCC9784 = CBS 312.48 = 28671 = MUCL = FRR 802 IMI 039754 MUCL 802 = QM 7510 29131 = NRRL 29073 = MUCL CBS 259.67 = ATCC 22351 = FRR 3403 IFO 9146 ATCC CBS 259.67 = IMI 103148 P. griseolum P. guttulosum P. hemitrachum P. hemitrachum P. hemitrachum P. heteromorphum P. P. corylophilum P. P. corylophilum P. corylophilum P. cravenianum P. decumbens P. P. dimorphosporum dravuni P. P. erubescens P. fagi P. katangense P. kurssanovii P. laeve P. P. corylophilum P. Species name Collection numbers corylophilum P. Table 1. (Continued). Table P. corylophilum P.
80 IMA FUNGUS Penicillium sect. Exilicaulis ARTICLE BenA CaM RPB2 KP016764 KP016802KP016760 KP016793 KP064659 KP064649 GenBank accession numbers KC411767 KP016762 KP016798 KP064657 KF667370 KF667366JX140898 KF667368 JX141070 KF667372 JX157519 KP064655 KC411691KC411693 KJ834451 KP016785 KP016766 KP016809 KP064637 KP064681 JX140895 JX141073 JX157479 KP064673 AF033463 JX141067 KP016795 JF417430 AF033460 HQ646568 KF900173 JN406559 ITS KC411727 KP016763 KP016801 KP064658 KC411692 KJ834474 KP016796 JN121453 n.a. n.a. HQ646591 HQ646573 HQ646584 KF900194 KC411689JX140919 KJ834468 KP016791 JX141050JX140920 KP064648 JX157451 JX141051 KP064650 JX157452 KP064651 AF033449 KJ834471 KP016792 JN406613 AF033409 KJ834465 FJ530984 JN121500 AF033451 KJ834472 KP016794 JN406576 P. papuanum P. P. radulatum P. Kuala Lumpur, Kuala Lumpur, > <