Plant Disease Susceptibility Conferred by a ''Resistance'' Gene
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Recent Advances in Effector-Triggered Immunity in Plants: New Pieces in the Puzzle Create a Different Paradigm
International Journal of Molecular Sciences Review Recent Advances in Effector-Triggered Immunity in Plants: New Pieces in the Puzzle Create a Different Paradigm Quang-Minh Nguyen 1,† , Arya Bagus Boedi Iswanto 1,† , Geon Hui Son 1 and Sang Hee Kim 1,2,* 1 Division of Applied Life Science (BK21 Four Program), Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, 501 Jinju-daero, Jinju 52828, Korea; [email protected] (Q.-M.N.); [email protected] (A.B.B.I.); [email protected] (G.H.S.) 2 Division of Life Science, Gyeongsang National University, 501 Jinju-daero, Jinju 52828, Korea * Correspondence: [email protected] † These authors contributed equally to this work. Abstract: Plants rely on multiple immune systems to protect themselves from pathogens. When pattern-triggered immunity (PTI)—the first layer of the immune response—is no longer effective as a result of pathogenic effectors, effector-triggered immunity (ETI) often provides resistance. In ETI, host plants directly or indirectly perceive pathogen effectors via resistance proteins and launch a more robust and rapid defense response. Resistance proteins are typically found in the form of nucleotide- binding and leucine-rich-repeat-containing receptors (NLRs). Upon effector recognition, an NLR undergoes structural change and associates with other NLRs. The dimerization or oligomerization of NLRs signals to downstream components, activates “helper” NLRs, and culminates in the ETI response. Originally, PTI was thought to contribute little to ETI. However, most recent studies revealed crosstalk and cooperation between ETI and PTI. Here, we summarize recent advancements Citation: Nguyen, Q.-M.; Iswanto, in our understanding of the ETI response and its components, as well as how these components A.B.B.; Son, G.H.; Kim, S.H. -
Soybean Resistance Genes Specific for Different Pseudomonas Syringue Avirwlence Genes Are Auelic, Or Closely Linked, at the RPG1 Locus
Copyright 0 1995 by the Genetics Society of America Soybean Resistance Genes Specific for Different Pseudomonas syringue Avirwlence Genes are AUelic, or Closely Linked, at the RPG1 Locus Tom Ashfield,* Noel T. Keen,+ Richard I. Buzzell: and Roger W. Innes* *Department of Biology, Indiana University, Bloomington, Indiana 47405, $Department of Plant Pathology, University of California, Riverside, California 92521, and fAgriculture & Agri-food Canada, Research Station, Harrow, Ontario NOR lG0, Canada Manuscript received July6, 1995 Accepted for publication September 11, 1995 ABSTRACT RPGl and RPMl are disease resistance genes in soybean and Arabidopsis, respectively, that confer resistance to Pseudomonas syringae strains expressing the avirulence gene awB. RPMl has recently been demonstrated to have a second specificity, also conferring resistance to P. syringae strains expressing [email protected] we show that alleles, or closely linked genes, exist at the RPGl locus in soybean that are specific for either awB or awR@ml and thus can distinguish between these two avirulence genes. ESISTANCE displayed by particular plant cultivars genes specific to avirulence genes of both the soybean R to specific races of a pathogen is often mediated pathogen Psgand the tomato pathogen Pst. The inabil- by single dominant resistance genes (R-genes). Typi- ity of Pstto cause disease in any soybean cultivarcan be cally, these R-genes interact with single dominant “avir- explained, atleast in part, by the presence of a battery of ulence” (aw) genes in the pathogen. Such specific in- resistance genes in soybean that correspond to one or teractions between races of pathogens and cultivars of more avirulence genes present in all Pst strains. -
Genetic Engineering and Sustainable Crop Disease Management: Opportunities for Case-By-Case Decision-Making
sustainability Review Genetic Engineering and Sustainable Crop Disease Management: Opportunities for Case-by-Case Decision-Making Paul Vincelli Department of Plant Pathology, 207 Plant Science Building, College of Agriculture, Food and Environment, University of Kentucky, Lexington, KY 40546, USA; [email protected] Academic Editor: Sean Clark Received: 22 March 2016; Accepted: 13 May 2016; Published: 20 May 2016 Abstract: Genetic engineering (GE) offers an expanding array of strategies for enhancing disease resistance of crop plants in sustainable ways, including the potential for reduced pesticide usage. Certain GE applications involve transgenesis, in some cases creating a metabolic pathway novel to the GE crop. In other cases, only cisgenessis is employed. In yet other cases, engineered genetic changes can be so minimal as to be indistinguishable from natural mutations. Thus, GE crops vary substantially and should be evaluated for risks, benefits, and social considerations on a case-by-case basis. Deployment of GE traits should be with an eye towards long-term sustainability; several options are discussed. Selected risks and concerns of GE are also considered, along with genome editing, a technology that greatly expands the capacity of molecular biologists to make more precise and targeted genetic edits. While GE is merely a suite of tools to supplement other breeding techniques, if wisely used, certain GE tools and applications can contribute to sustainability goals. Keywords: biotechnology; GMO (genetically modified organism) 1. Introduction and Background Disease management practices can contribute to sustainability by protecting crop yields, maintaining and improving profitability for crop producers, reducing losses along the distribution chain, and reducing the negative environmental impacts of diseases and their management. -
Cognitive and Memory Functions in Plant Immunity
Review Cognitive and Memory Functions in Plant Immunity Hidetaka Yakura Institute for Science and Human Existence, Tokyo 163-8001, Japan; [email protected] Received: 5 August 2020; Accepted: 16 September 2020; Published: 17 September 2020 Abstract: From the time of Thucydides in the 5th century BC, it has been known that specific recognition of pathogens and memory formation are critical components of immune functions. In contrast to the immune system of jawed vertebrates, such as humans and mice, plants lack a circulatory system with mobile immune cells and a repertoire of clonally distributed antigen receptors with almost unlimited specificities. However, without these systems and mechanisms, plants can live and survive in the same hostile environment faced by other organisms. In fact, they achieve specific pathogen recognition and elimination, with limited self-reactivity, and generate immunological memory, sometimes with transgenerational characteristics. Thus, the plant immune system satisfies minimal conditions for constituting an immune system, namely, the recognition of signals in the milieu, integration of that information, subsequent efficient reaction based on the integrated information, and memorization of the experience. In the previous report, this set of elements was proposed as an example of minimal cognitive functions. In this essay, I will first review current understanding of plant immunity and then discuss the unique features of cognitive activities, including recognition of signals from external as well as internal environments, autoimmunity, and memory formation. In doing so, I hope to reach a deeper understanding of the significance of immunity omnipresent in the realm of living organisms. Keywords: autoimmunity; cognition; metaphysicalization; plant immunity; transgenerational memory 1. -
Prrs and NB-Lrrs: from Signal Perception to Activation of Plant Innate Immunity
International Journal of Molecular Sciences Review PRRs and NB-LRRs: From Signal Perception to Activation of Plant Innate Immunity Ali Noman 1,2,* , Muhammad Aqeel 3 and Yonggen Lou 1,* 1 Institute of Insect Sciences, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310027, China 2 Department of Botany, Government College University, Faisalabad 38000, Pakistan 3 State Key Laboratory of Grassland Agro-ecosystems, School of Life Science, Lanzhou University, Lanzhou 730000, China; [email protected] * Correspondence: [email protected] (A.N.); [email protected] (Y.L.); Tel.: +86-571-889-8622 (Y.L.) Received: 18 February 2019; Accepted: 10 April 2019; Published: 16 April 2019 Abstract: To ward off pathogens and pests, plants use a sophisticated immune system. They use pattern-recognition receptors (PRRs), as well as nucleotide-binding and leucine-rich repeat (NB-LRR) domains, for detecting nonindigenous molecular signatures from pathogens. Plant PRRs induce local and systemic immunity. Plasma-membrane-localized PRRs are the main components of multiprotein complexes having additional transmembrane and cytosolic kinases. Topical research involving proteins and their interactive partners, along with transcriptional and posttranscriptional regulation, has extended our understanding of R-gene-mediated plant immunity. The unique LRR domain conformation helps in the best utilization of a surface area and essentially mediates protein–protein interactions. Genome-wide analyses of inter- and intraspecies PRRs and NB-LRRs offer innovative information about their working and evolution. We reviewed plant immune responses with relevance to PRRs and NB-LRRs. This article focuses on the significant functional diversity, pathogen-recognition mechanisms, and subcellular compartmentalization of plant PRRs and NB-LRRs. -
A Review on Role of Breeding for Rust Disease Resistance in Soybean
OPEN ACCESS Freely available online l Scienc ra e a ltu n u d F ic r o g o d A f R o e l s a e a n Journal of r r u c h o J ISSN: 2593-9173 Agricultural Science and Food Research Review Article A Review on Role of Breeding for Rust Disease Resistance in Soybean (Glycine max [L.] Merrill) Asmamaw Amogne Mekonen* Department of Plant Science and Crop Breeding, Ethiopian Institute of Agricultural Research, Pawe Agricultural Research Center, Ethiopia ABSTRACT This review has been checked on in 2018 at Pawe Agricultural Research Center to analyze or to evaluate what reproducing activities those are really not regular in Ethiopia, direct for rust ailment opposition. The survey was explored by assessing various diaries which have been composed for Asian Soybean Rust that is getting to be normal and cut off even in Ethiopia. Soybean rust brought about by P. pachyrhizi likewise called Asian soybean rust (ASR). Hot and damp condition is a perfect condition that can cause soybean rust infection which prompts decreased photosynthetic region on the leaves and untimely defoliation, favors illness occurrence. Rearing systems for opposition are progressively appropriate to manageable horticulture, lessens the requirement for synthetic applications and subsequently, natural harm. Diverse reproducing strategies has been applying to create opposition assortment and to control Asian Soybean Rust. Among those, screening or recognize germplasms having obstruction quality to fuse it into rust defenseless genotypes, create opposition quality trough hybridization, Resistance quality pyramiding, wide hybridization and quality quieting are the significant techniques of reproducing for advancement imperviousness to rust soybean material. -
Balint-Kurti, PJ and GS Johal. 2009. Maize Disease Resistance. In
Maize Disease Resistance Peter J. Balint-Kurti and Gurmukh S. Johal Abstract This chapter presents a selective view of maize disease resistance to fungal diseases, highlighting some aspects of the subject that are currently of sig- nificant interest or that we feel have been under-investigated. These include: ● The significant historical contributions to disease resistance genetics resulting from research in maize. ● The current state of knowledge of the genetics of resistance to significant dis- eases in maize. ● Systemic acquired resistance and induced systemic resistance in maize. ● The prospects for the future, particularly for transgenically-derived disease resistance and for the elucidation of quantitative disease resistance. ● The suitability of maize as a system for disease resistance studies. 1 Introduction Worldwide losses in maize due to disease (not including insects or viruses) were estimated to be about 9% in 2001–3 (Oerke, 2005) . This varied significantly by region with estimates of 4% in northern Europe and 14% in West Africa and South Asia ( http://www.cabicompendium.org/cpc/economic.asp ). Losses have tended to be effectively controlled in high-intensity agricultural systems where it has been economical to invest in resistant germplasm and (in some cases) pesticide applica- tions. However, in areas like Southeast Asia, hot, humid conditions have favored disease development while economic constraints prevent the deployment of effec- tive protective measures. This chapter, rather than being a comprehensive overview of maize disease resistance, highlights some aspects of the subject that are currently of significant interest or that we feel have been under-investigated. We outline some major con- tributions to disease resistance genetics that have come out of studies in maize and discuss maize as a model system for disease resistance studies. -
A Comprehensive Collection of Experimentally Validated Plant Nlrs
bioRxiv preprint doi: https://doi.org/10.1101/2020.07.08.193961; this version posted January 31, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. RefPlantNLR: a comprehensive collection of experimentally validated plant NLRs Jiorgos Kourelis, Toshiyuki Sakai, Hiroaki Adachi, and Sophien Kamoun* The Sainsbury Laboratory, University of East Anglia, Norwich Research Park, Norwich, UK *Correspondence: [email protected] ABSTRACT Reference datasets are critical in computational biology. They help define canonical biological features and are essential for benchmarking studies. Here, we describe a comprehensive reference dataset of experimentally validated plant NLR immune receptors. RefPlantNLR consists of 442 NLRs from 31 genera belonging to 11 orders of flowering plants. This reference dataset has several applications. We used RefPlantNLR to determine the canonical features of functionally validated plant NLRs and to benchmark the five most popular NLR annotation tools. This revealed that although NLR annotation tools tend to retrieve the majority of NLRs, they frequently produce domain architectures that are inconsistent with the RefPlantNLR annotation. Guided by this analysis, we developed a new pipeline, NLRtracker, which extracts and annotates NLRs based on the core features found in the RefPlantNLR dataset. The RefPlantNLR dataset should also prove useful for guiding comparative analyses of NLRs across the wide spectrum of plant diversity and identifying under-studied taxa. We hope that the RefPlantNLR resource will contribute to moving the field beyond a uniform view of NLR structure and function. -
Concepts in Plant Disease Resistance
REVISÃO / REVIEW CONCEPTS IN PLANT DISEASE RESISTANCE FRANCISCO XAVIER RIBEIRO DO VALE1, J. E. PARLEVLIET2 & LAÉRCIO ZAMBOLIM1 1Departamento de Fitopatologia, Universidade Federal de Viçosa, CEP 36571-000, Viçosa, MG, Brasil, e-mail: [email protected]; 2Department of Plant Breeding (IVP), Wageningen Agricultural University, P.O. Box 386, 6700 AJ Wageningen, The Netherlands (Aceito para publicação em 13/08/2001) Autor para correspondência: Francisco Xavier Ribeiro do Vale RIBEIRO DO VALE, F.X., PARLEVLIET, J.E. & ZAMBOLIM, L. Concepts in plant disease resistance. Fitopatologia Brasileira 26:577- 589. 2001. ABSTRACT Resistance to nearly all pathogens occurs abundantly Race-specificity is not the cause of elusive resistance but the in our crops. Much of the resistance exploited by breeders is consequence of it. Understanding acquired resistance may of the major gene type. Polygenic resistance, although used open interesting approaches to control pathogens. This is even much less, is even more abundantly available. Many types of truer for molecular techniques, which already represent an resistance are highly elusive, the pathogen apparently adapting enourmously wide range of possibilities. Resistance obtained very easily them. Other types of resistance, the so-called through transformation is often of the quantitative type and durable resistance, remain effective much longer. The elusive may be durable in most cases. resistance is invariably of the monogenic type and usually of Key words: types of resistance; genetics of resistance; the hypersensitive type directed against specialised pathogens. acquired resistance. RESUMO Conceitos em resistência de plantas a doenças Na natureza a resistência à maioria das doenças ocorre tência durável. A resistência temporária é invariavelmente nas culturas. -
Self/Nonself Perception and Recognition Mechanisms in Plants: a Comparison of Self-Incompatibility and Innate Immunity
Review BlackwellOxford,NPHNew0028-646X1464-5491©240310.1111/j.1464-5491.2008.02403.xFebruary0503???513???Research The Phytologist Authors UKreview review2008 Publishing (2008). Ltd Journal compilation © New Phytologist (2008) Research reviewResearch review Self/nonself perception and recognition mechanisms in plants: a comparison of self-incompatibility and innate immunity Author for correspondence: Natasha Sanabria1, Daphne Goring2, Thorsten Nürnberger3 and Ian A. Dubery Ian Dubery1 Tel: +27 11 559 2401 Fax: +27 11 559 2401 1Department of Biochemistry, University of Johannesburg, Auckland Park, South Africa; 2Department Email: [email protected] of Cell and Systems Biology, University of Toronto, Toronto, Canada; 3Centre for Plant Molecular Received: 3 December 2007 Biology, Eberhard-Karls University, Tübingen, Germany Accepted: 14 January 2008 Summary Key words: innate immunity, leucine-rich Analyses of emerging concepts indicate that parallels exist between self- repeats, pathogen-associated molecular incompatibility and pathogen recognition. In the case of surveillance of ‘nonself’, patterns, pattern-recognition receptors, plant immune responses are triggered either by pattern recognition receptors (PRRs) receptor-like kinases, resistance genes, that detect conserved pathogen-associated molecular patterns (PAMPs) or by S domains, self-incompatibility. resistance (R) proteins recognizing isolate-specific pathogen effectors. PAMP detection is an important component of innate immunity in plants and serves as an early warning system for the presence of potential pathogens and activation of plant defense mechanisms. In the Brassicaceae, the recognition of ‘self’ and self-incompatibility are components of a receptor-ligand based mechanism that utilizes an S receptor kinase (SRK) to perceive and reject ‘self’-pollen. SRK is an S-domain receptor-like kinase (RLK), which in turn is part of the RLK family, some members of which represent PRRs involved in the detection of PAMPs. -
Fine Mapping of the Pc Locus of Sorghum Bicolor, a Gene Controlling the Reaction to a Fungal Pathogen and Its Host-Selective Toxin
Theor Appl Genet (2007) 114:961–970 DOI 10.1007/s00122-006-0481-1 ORIGINAL PAPER Fine mapping of the Pc locus of Sorghum bicolor, a gene controlling the reaction to a fungal pathogen and its host-selective toxin Ervin D. Nagy · Tso-Ching Lee · Wusirika Ramakrishna · Zijun Xu · Patricia E. Klein · Phillip SanMiguel · Chiu-Ping Cheng · Jingling Li · Katrien M. Devos · Keith Schertz · Larry Dunkle · JeVrey L. Bennetzen Received: 26 July 2006 / Accepted: 30 November 2006 / Published online: 14 March 2007 © Springer-Verlag 2007 Abstract Milo disease in sorghum is caused by isolates sorghum suggests that one or more members of this NBS- of the soil-borne fungus Periconia circinata that produce LRR gene family are the Pc genes that condition suscepti- PC-toxin. Susceptibility to milo disease is conditioned by a bility. single, semi-dominant gene, termed Pc. The susceptible allele (Pc) converts to a resistant form (pc) spontaneously at a gametic frequency of 10¡3 to 10¡4. A high-density Introduction genetic map was constructed around the Pc locus using DNA markers, allowing the Pc gene to be delimited to a Plant responses to potential pathogens are frequently gov- 0.9 cM region on the short arm of sorghum chromosome 9. erned by speciWc interactions between elicitor compounds Physically, the Pc-region was covered by a single BAC secreted by the pathogen and plant resistance gene prod- clone. Sequence analysis of this BAC revealed twelve gene ucts. Although the known pathogenic elicitors represent a candidates. Several of the predicted genes in the region are wide assortment of compounds, most resistance genes can homologous to disease resistance loci, including one NBS- be classiWed into a few well-deWned groups (Nimchuk et al. -
Plant Disease Control: Understanding the Roles of Toxins and Phytoalexins in Host-Pathogen Interaction
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Pertanika Journal of Scholarly Research Reviews (PJSRR - Universiti Putra Malaysia,... PJSRR (2018) 4(1): 54-66 eISSN: 2462-2028 © Universiti Putra Malaysia Press Pertanika Journal of Scholarly Research Reviews http://www.pjsrr.upm.edu.my/ Plant Disease Control: Understanding the Roles of Toxins and Phytoalexins in Host-Pathogen Interaction Magaji G USMANa,b, Tijjani AHMADUb, ADAMU Jibrin Nayayab, AISHA M Dodoc aLaboratory of Climate-Smart Food Crop Production, Institute of Tropical Agriculture and Food Security, Universiti Putra Malaysia, 43400 UPM Serdang, Selangor, Malaysia bDepartment of Crop Production, Faculty of Agriculture and Agricultural Technology, Abubakar Tafawa Balewa University (ATBU). PMB 0248, Bauchi, Nigeria cCardiff School of Sport and Health Sciences, Cardiff Metropolitan University, Cardiff, United Kingdom *[email protected] Abstract – Naturally, plant habitats are exposed to several potential effects of biotic and different abiotic environmental challenges. Several types of micro-organisms namely; bacteria, viruses, fungi, nematodes, mites, insects, mammals and other herbivorous animals are found in large amounts in all ecosystems, which lead to considerable reduction in crop productivity. These organisms are agents carrying different diseases that can damage the plants through the secretion of toxic-microbial poisons that can penetrate in the plant tissues. Toxins are injurious substances that act on plant protoplast to influence disease development. In response to the stress effect, plants defend themselves by bearing some substances such as phytoalexins. Production of phytoalexins is one of the complex mechanisms through which plants exhibit disease resistance. Several findings specifically on phytoalexins have widen the understanding in the fields of plant biochemistry and molecular biology.