Index 499 Abacavir Case Study, 359 Drug Labeling And, 448 Infectious Diseases And, 317 Pharmacist And, 465 Pharmacodynamics Of
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Index 499 A Allele, 3, 8 detection of, 59, 70-71, 74, 92, 94 Abacavir discrimination, 59, 68, 70-72, 74-75, 88, 90-92, case study, 359 94 drug labeling and, 448 frequency calculations for, 34 infectious diseases and, 317 genetics and, 19, 20, 22, 28-30, 32, 34-47, 49, 52-53 pharmacist and, 465 methodologies, 59, 60, 70-75, 85-94, 96-97 pharmacodynamics of, 198 respiratory diseases and, 327, 336-338, 343, toxicogenomics of, 367 346 ABC transporters, 153-154 -specific amplifications, 92-93 ABCB1, 154-158, 160-161, 258, 263, 314 Allele-specific oligonucleotide (ASO) hybridiza- ABCC transporter family, 161-168 tion, 59, 74, 90-91 Allelic drift, 38 ABCC1, 161-162 All-trans retinoic acid (ATRA), 271 ABCC2, 162-163 Alpha-glucosidase inhibitors, 406, 421-422 ABCC3, 163 gene polymorphisms and, 425 ABCC4, 163 Alzheimer’s disease, 201, 296 ABCC5, 163 American Academy for Study of Liver Diseases, ABCC6, 166 322 American College of Cardiology, 228 ABCC8, 407-409, 410-411, 414, 446 American College of Medical Genetics working ABCC11, 166-167 group, 475 ABCG2, 167-168 American Heart Association Foundation, 228 Acamprosate, 394 American Hospital Formulary Service Drug Infor- Acarbose, 421-422 mation, 461 Americans with Disabilities Act, 479 Access issues, 474 Amino acid, 25 Accreditation Counsel for Pharmacy Education, 461 Amiodarone, 243-244 Accuracy, 72 Amitriptyline, 285 ACE inhibitors, 194-195, 200, 230, 232-233, 296 Analytical specificity, 71-72 Acenocoumarol, 222 Ancillary information, 467-468, 470, 473, 475-477, Acetaminophen, 112 480-481 Anderson, Keri C., 453-466 Acute lymphoblastic leukemia, 270-271 Angiotensin II receptor blockers, 230, 232-233 Acute myeloid leukemia, 271 Angiotensin-converting enzyme inhibitors, 10, 170 Adams, Patti W., 375-403 Annealing, 65, 66 Addiction disorders, 299, 375-403 Ansong, Miriam A., 491-498 Adipokinins, 421 Anthracyclines, 167, 263 ADRB2, 445 Anthracenediones, 263 Antiarrhythmic agents, 124, 242-244, 444, 473 Adverse drug event (ADE), 107, 108, 111 Antibiotics, metabolomics and transporters affect- Adverse drug reaction (ADR) ing, 313-314 drug metabolism and, 107, 108, 111, 119, 123, 130, Anticoagulants, 217-223 133-134, 136 Anticonvulsants, 157 ethics and, 472-473 Antidepressants, 121, 124, 157, 160-161, 290-292, 300 increased incidence of, 197-201 Antiepileptic drugs, 163, 294 Aerosolized tobramycin, 345 Antihistamines, 157 Afatinib, 204, 269 Antihypertensives, 124 Age dilemma, 476-477 Antineoplastic response, 196 Agranulocytosis, 293, 294 Antiplatelets, 217-223 Albuterol, 331 Antipsychotics, 124, 199-200, 292-294, 473 Antiretroviral hypersensitivity, 317-320 Alcohol addiction, 192 Antiretroviral resistance testing, 318 pharmacotherapy for, 393-394, 396 Antiretroviral therapy, 192, 200-201 treatments, 299 Antisense strand, 24 Alectinib, 205 Apixaban, 223 Alert, 453, 457-458 Apyrase, 78 Alkylating agents, 268 AQP2 gene variant, 420 Unauthenticated | Downloaded 10/02/21 05:47 PM UTC 500 CONCEPTS IN PHARMACOGENOMICS Arachidonate 5-lipoxygenase gene (ALOX5), resistance protein, 263 337-338 Brexpiprazole, 285 Arformoterol, 445-446 Bridge amplification, 67, 68-69, 81 Arg16Gly, 332-333 Brivaracetam, 285 Aripiprazole, 285 Bromocriptine, 406 Aromatase inhibitors, 127 Bronchiectasis, 327, 341-342 ArrayExpress, 364 Buccal epithelial cells collection, 63 Arrhythmia, 215, 242-245 Bucindolol, 231 Aspirin, 129-130, 216, 223-224, 274 Budesonide, 334 resistance, 224 Buprenorphine, 394, 396 Assay(s), 59, 61-62, 70-73, 80, 85-90, 92-97 Bupropion, 128, 395, 396 Asthma, 328-340 Burkitt’s lymphoma, 34 case study, 328-329 therapy, 194 C Ataluren, 348 Cabozantinib, 204 Atenolol and warfarin case study, 21 Caffeine, 117 Atomoxetine, 125, 285, 295 Calcium channel blockers, 157 Atorvastatin, 216, 236, 240, 241 Camptothecin derivatives, 167 Ataxia telangiectasia mutated gene, 419 Camptothecins, 263 ATP-binding cassette (ABC), 9, 152 Canagliflozin, 423 Attention-deficit hyperactivity disorder, 295 Cancer/carcinoma, 202-205, 257, 259, 272 Atypical antipsychotic, 283, 293 biology, 258 Autonomy, 467, 469, 471, 474, 481 chemoprevention, 257, 261, 268-269, 272, 274 Autosomal chromosome, 34-35 chemotherapy, 257, 260-261, 266, 276 Autosome (autosomal), 19, 34 genetics, 269-274 Azathioprine, 134, 368 syndromes, 274 case study, 6 Candidate gene study, 257, 262 Azithromycin, 314, 345 Capecitabine, 129 Carbamazepine, 198, 284, 286, 298, 300, 367 B Cardiovascular diseases, 215-256, 439-440, Bacteria, 310-312 443-445 Bacterial resistance, 310-312 valid biomarkers for, 440 Barefield, Kimberly L., 405-433, 437-451 Carvedilol, 120, 125, 444, 445 Basal insulin, 406 Case-control studies, 52 BChE enzyme, 131-132 Celecoxib, 120 Beclomethasone dipropionate, 334 Cell Beneficence, 467, 469, 470, 474, 483 differentiation, 276-277 Beta agonists/theophylline, 345 surface receptors, 189 Beta-blocker(s), 10, 157, 185, 187, 190-191, 230-232, Centers for Disease Control and Prevention, 95 444 Centers for Medicare & Medicaid Services (CMS), Beta-Blocker Evaluation in Survival Trial, 231 72, 95 Beta-2 adrenergic receptor agonists, 330, 331-333 Central nervous system disorders, 283-308, 447 Beta-adrenergic receptors, 189-190 drug targets for, 192-193 Beta-adrenoreceptor antagonists, 473 valid biomarkers for, 442 Bevacizumab, 204 Ceritinib, 205 Biguanide, 417 Cerivastatin, 14 gene polymorphisms and, 425 Cetuximab, 203, 204, 273 Binding motif, 327, 337 CFTR protein, 341-342 Bioactivation, 127 drugs for, 345-350 Biofilm, 327, 342 dysfunction classification for, 343 Biological fitness, 38 mutations of, 343-344 Biomarker(s), 3, 12-13 Chain termination sequencing, 75-76 disease states and, 201 Chemiluminescence, 74 medications and, 285-290 Chemoattractant, 327, 342 pharmacodynamics and, 183, 184, 201-202 Chemotherapeutic agents, 263-268 toxicogenomics and, 364-365, 367, 369 Children, research on, 483-484 valid. See Valid biomarkers Chlorpropamide, 407, 408 Biotransformation, 111-113 Chromatid, 19, 31 Bipolar disorder, 294-295 Chromosomal aberrations, 34 Bradykinin-mediated cough, 200 Chromosome, 19, 20, 22, 28-29, 32-34, 39-40, 43 Breast cancer, 272-273 Chronic lymphocytic leukemia, 271 Unauthenticated | Downloaded 10/02/21 05:47 PM UTC Index 501 Chronic myelogenous leukemia, 272 CYP1A2, 115-117, 300, 339 Ciclesonide, 334 CYP2A6, 392 Cimetidine, 124 CYP2B6, 117-118 Ciprofloxacin, 314 CYP2C subfamily, 118-122 Cisapride, 198, 199 Citalopram, 286 CYP2C8, 421 Clarification of Optimal Oral Anticoagulation CYP2C9, 118-121, 413-414, 416, 439-440, 443-444 through Genetics, 221-222 CYP2C10, 121-122 Clarithromycin, 199, 313 CYP2C19, 122-124, 413-414, 444, 447, 448 Clearance, 127 CYP2D6, 5, 8, 29, 96, 124-128, 444-445 Cleavage-based assays, 86-87 case study, 62 Cleavase/FRET (fluorescence resonance energy Cysteinyl LT receptor genes, 338 transfer), 87, 88 Cystic fibrosis, 201-202, 328, 340-350 Clinical coordinator, 456 case study, 329 Clinical decision support, 453, 456, 461 Cystic Fibrosis Foundation, 341 Clinical interventions, 453, 456, 457-459 Cytochrome P (CYP), 267-268 Clinical Laboratory Improvement Amendment isoforms of, 111 (CLIA) of 1988, 72, 95 phenotypes, characteristics of, 114-115 Clinical pharmacist/pharmacy specialist, 456 Cytochrome P450 (CYP450), 29, 107 Clinical Pharmacogenetics Implementation CNS and, 292 Consortium, 115, 223, 284, 365-366 drug labeling and, 439-440, 443-444 Clinical practice, 477, 480-481, 491-498 drug metabolism and, 111-112, 115-129 Clinical protocols, 453, 457 isoforms in drug metabolism, 109 Clinical validity, 437 Phase I and, 115-117 Clobazam, 286 Cytosolic receptors, 193 Clomipramine, 286 Clopidogrel, 472 D cardiovascular treatment with, 216, 224-229 Dabigatran, 223 drug labeling of, 444 Dabrafenib, 205, 270, 273 drug metabolism for, 121, 122, 124, 128 Dapagliflozin, 423 Clozapine, 116-117, 286 Dapsone, 313 -induced agranulocytosis, 294 Daptomycin, 314 Darifenacin, 125 Cobimetinib, 205 Dasatinib, 269 Cocaine, 131 Data analysis, 95 Codeine, 126-127, 299 Data interpretation, 61 case study, 110 Deletion mutation, 33 Coding region SNPs, 30 Delta opioid receptor, 386-387 Colorectal cancer, 273 Denaturation, 65, 66 Deoxyribonucleic acid (DNA), 3, 5, 6 Combinatorial probe-anchor ligation, 83-84 amplification of, 64-70 Communitarianism, 472 clinical practice and, 391, 494 Copy number variant polymorphisms, 19 diabetes mellitus and, 405, 418 Copy number variation, 257, 262 genetic basis and, 19-33, 46 Corticosteroids, 345 hematology/oncology and, 258-260, 274-275 infectious disease and, 309, 311 Corticotrophin-releasing hormone receptor-1, 335 isolation of, 64 Cox, Arthur G., 151-181 microarrays of, 90-92 COX inhibitors, 195 pharmacodynamics, pharmacogenomics of, 183, Crizotinib, 205 184, 187, 196-197, 200, 202 Crossover recombination, 40 pharmacogenomics methodologies and, 60, CTRB1, CTRB2, 422 61, 71 preparation of, 61 Culturing, 310-311 sample collection, 63 Cyclic reversible chain termination, 81 sequencing, 75-85 Cyclophosphamide, 117-118, 168, 264, 268 sequencing cost of, 97-98 Cyclosporine, 157 structure of, 23 Unauthenticated | Downloaded 10/02/21 05:47 PM UTC 502 CONCEPTS IN PHARMACOGENOMICS toxicogenomics and, 357, 360-361, 368 ELISA, 321 Dependence, 375, 376, 387 Elongation, of polypeptide chain, 27 Desipramine, 128, 286 Empagliflozin, 423 Dextromethorphan and quinidine, 286 Emulsion PCR, 68, 69 Diabetes mellitus, 405-433 Endocrinology diseases, 446 early development of, 412-413 valid biomarkers for, 440 Diagnostic and Statistical Manual of Mental Endoxifen, 127 Disorders (5th edition), 392 Enhanced Sensitivity Trofile