Chemosymbiotic Species from the Gulf of Cadiz
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(Mollusca, Bivalvia) from Deep-Water, Beaufort Sea, Northern Alaska
A peer-reviewed open-access journal ZooKeys 462: 11–26A new (2014) genus and species of Thyasiridae( Mollusca, Bivalvia) from deep-water 11 doi: 10.3897/zookeys.462.6790 RESEARCH ARTICLE http://zookeys.pensoft.net Launched to accelerate biodiversity research A new genus and species of Thyasiridae (Mollusca, Bivalvia) from deep-water, Beaufort Sea, northern Alaska Paul Valentich-Scott1, Charles L. Powell, II2, Thomas D. Lorenson2, Brian E. Edwards2 1 Santa Barbara Museum of Natural History, 2259 Puesta del Sol Road, Santa Barbara, CA 93105 2 U.S. Geological Survey, 345 Middlefield Road, Menlo Park, CA 94025 Corresponding author: Paul Valentich-Scott ([email protected]) Academic editor: R. C. Willan | Received 12 December 2013 | Accepted 11 November 2014 | Published 10 December 2014 http://zoobank.org/865205A2-6C79-4131-9C25-5625F3D8C59B Citation: Valentich-Scott P, Powell II CL, Lorenson TD, Edwards BR (2014) A new genus and species of Thyasiridae (Mollusca, Bivalvia) from deep-water, Beaufort Sea, northern Alaska. ZooKeys 462: 11–26. doi: 10.3897/zookeys.462.6790 Abstract Bivalve mollusk shells were collected in 2350 m depth in the Beaufort Sea, Arctic Ocean off northern Alaska. Initial identification suggested the specimens were a member of the bivalve family Thyasiridae, but no known eastern Pacific or Arctic living or fossil thyasirid resembled these deep-water specimens. Comparisons were made with the type of the genera Maorithyas Fleming, 1950, Spinaxinus Oliver & Holmes, 2006, Axinus Sowerby, 1821, and Parathyasira Iredale, 1930. We determined the Beaufort Sea species represents a new genus, herein described as Wallerconcha. These specimens also represent a new species, herein named Wallerconcha sarae. -
Mediterranean Marine Science
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by National Documentation Centre - EKT journals Mediterranean Marine Science Vol. 13, 2012 New records of recently described chemosymbiotic bivalves for mud volcanoes within the European waters (Gulf of Cádiz) RUEDA J.L. Centro Oceanográfico de Málaga, Instituto Español de Oceanografía, Puerto pesquero s/n, Fuengirola 29640, Málaga URRA J. Departamento de Biología Animal, Facultad de Ciencias, Universidad de Málaga, Campus de Teatino s/n, Málaga 29671 GOFAS S. Departamento de Biologia Animal, Facultad de Ciencias, Universidad de Malaga, E-29071 Malaga LOPEZ-GONZALEZ N. Centro Oceanográfico de Málaga, Instituto Español de Oceanografía, Puerto pesquero s/n, Fuengirola 29640, Málaga FERNANDEZ-SALAS L.M. Centro Oceanográfico de Málaga, Instituto Español de Oceanografía, Puerto pesquero s/n, Fuengirola 29640, Málaga DIAZ-DEL-RIO V. Centro Oceanográfico de Málaga, Instituto Español de Oceanografía, Puerto pesquero s/n, Fuengirola 29640, Málaga https://doi.org/10.12681/mms.307 Copyright © 2012 To cite this article: http://epublishing.ekt.gr | e-Publisher: EKT | Downloaded at 21/02/2020 06:28:48 | RUEDA, J., URRA, J., GOFAS, S., LOPEZ-GONZALEZ, N., FERNANDEZ-SALAS, L., & DIAZ-DEL-RIO, V. (2012). New records of recently described chemosymbiotic bivalves for mud volcanoes within the European waters (Gulf of Cádiz). Mediterranean Marine Science, 13(2), 262-267. doi:https://doi.org/10.12681/mms.307 http://epublishing.ekt.gr | e-Publisher: EKT | Downloaded at 21/02/2020 06:28:48 | Research Article Mediterranean Marine Science Indexed in WoS (Web of Science, ISI Thomson) and SCOPUS The journal is available on line at http://www.medit-mar-sc.net New records of recently described chemosymbiotic bivalves for mud volcanoes within the European waters (Gulf of Cádiz) J. -
Mollusks and a Crustacean from Early Oligocene Methane-Seep Deposits in the Talara Basin, Northern Peru
Mollusks and a crustacean from early Oligocene methane-seep deposits in the Talara Basin, northern Peru STEFFEN KIEL, FRIDA HYBERTSEN, MATÚŠ HYŽNÝ, and ADIËL A. KLOMPMAKER Kiel, S., Hybertsen, F., Hyžný, M., and Klompmaker, A.A. 2020. Mollusks and a crustacean from early Oligocene methane- seep deposits in the Talara Basin, northern Peru. Acta Palaeontologica Polonica 65 (1): 109–138. A total of 25 species of mollusks and crustaceans are reported from Oligocene seep deposits in the Talara Basin in north- ern Peru. Among these, 12 are identified to the species-level, including one new genus, six new species, and three new combinations. Pseudophopsis is introduced for medium-sized, elongate-oval kalenterid bivalves with a strong hinge plate and largely reduced hinge teeth, rough surface sculpture and lacking a pallial sinus. The new species include two bivalves, three gastropods, and one decapod crustacean: the protobranch bivalve Neilo altamirano and the vesicomyid bivalve Pleurophopsis talarensis; among the gastropods, the pyropeltid Pyropelta seca, the provannid Provanna pelada, and the hokkaidoconchid Ascheria salina; the new crustacean is the callianassid Eucalliax capsulasetaea. New combina- tions include the bivalves Conchocele tessaria, Lucinoma zapotalensis, and Pseudophopsis peruviana. Two species are shared with late Eocene to Oligocene seep faunas in Washington state, USA: Provanna antiqua and Colus sekiuensis; the Talara Basin fauna shares only genera, but no species with Oligocene seep fauna in other regions. Further noteworthy aspects of the molluscan fauna include the remarkable diversity of four limpet species, the oldest record of the cocculinid Coccopigya, and the youngest record of the largely seep-restricted genus Ascheria. -
Marine Geology 378 (2016) 196–212
Marine Geology 378 (2016) 196–212 Contents lists available at ScienceDirect Marine Geology journal homepage: www.elsevier.com/locate/margo Multidisciplinary study of mud volcanoes and diapirs and their relationship to seepages and bottom currents in the Gulf of Cádiz continental slope (northeastern sector) Desirée Palomino a,⁎, Nieves López-González a, Juan-Tomás Vázquez a, Luis-Miguel Fernández-Salas b, José-Luis Rueda a,RicardoSánchez-Lealb, Víctor Díaz-del-Río a a Instituto Español de Oceanografía, Centro Oceanográfico de Málaga, Puerto Pesquero S/N, 29640 Fuengirola, Málaga, Spain b Instituto Español de Oceanografía, Centro Oceanográfico de Cádiz, Muelle Pesquero S/N, 11006 Cádiz, Spain article info abstract Article history: The seabed morphology, type of sediments, and dominant benthic species on eleven mud volcanoes and diapirs Received 28 May 2015 located on the northern sector of the Gulf of Cádiz continental slope have been studied. The morphological char- Received in revised form 30 September 2015 acteristics were grouped as: (i) fluid-escape-related features, (ii) bottom current features, (iii) mass movement Accepted 4 October 2015 features, (iv) tectonic features and (v) biogenic-related features. The dominant benthic species associated with Available online 9 October 2015 fluid escape, hard substrates or soft bottoms, have also been mapped. A bottom current velocity analysis allowed, the morphological features to be correlated with the benthic habitats and the different sedimentary and ocean- Keywords: fl Seepage ographic characteristics. The major factors controlling these features and the benthic habitats are mud ows Mud volcanoes and fluid-escape-related processes, as well as the interaction of deep water masses with the seafloor topography. -
Reproductive Characteristics and Strategies of Reducing-System Bivalves
Comparative Biochemistry and Physiology Part A 126 (2000) 1–16 www.elsevier.com/locate/cbpa Review Reproductive characteristics and strategies of reducing-system bivalves Marcel Le Pennec a, Peter G. Beninger b,* a Institut Uni6ersitaire Europe´endelaMer, Place Nicolas Copernic, Technopoˆle Brest-Iroise, 29280 Plouzane´, France b Laboratoire de Biologie Marine, Faculte´ des Sciences, Uni6ersite´ de Nantes, 44322 Nantes ce´dex, France Received 23 September 1999; received in revised form 15 February 2000; accepted 25 February 2000 Abstract The reproductive biology of Type 3 reducing-system bivalves (those whose pallial cavity is irrigated with water rich in reducing substances) is reviewed, with respect to size-at-maturity, sexuality, reproductive cycle, gamete size, symbiont transmission, and larval development/dispersal strategies. The pattern which emerges from the fragmentary data is that these organisms present reproductive particularities associated with their habitat, and with their degree of reliance on bacterial endosymbionts. A partial exception to this pattern is the genus Bathymodiolus, which also presents fewer trophic adaptations to the reducing environment, suggesting a bivalent adaptive strategy. A more complete understand- ing of the reproductive biology of Type 3 bivalves requires much more data, which may not be feasible for some aspects in the deep-sea species. © 2000 Elsevier Science Inc. All rights reserved. Keywords: Reproduction; Bivalves; Reducing; Hydrothermal 1. Introduction 1979; Jannasch 1985; Smith 1985; Morton 1986; Reid and Brand, 1986; Distel and Felbeck 1987; Interest in the biology of marine reducing sys- Diouris et al. 1989; Tunnicliffe 1991; Le Pennec et tems has surged since the discovery of deep-sea al., 1995a). In contrast, general principles of the vents and associated fauna (Corliss et al., 1979). -
Chemosymbiotic Bivalves from the Mud Volcanoes of the Gulf of Cadiz, NE Atlantic, with Descriptions of New Species of Solemyidae, Lucinidae and Vesicomyidae
A peer-reviewed open-access journal ZooKeys 113: 1–38 (2011) Chemosymbiotic bivalves from the Gulf of Cadiz 1 doi: 10.3897/zookeys.113.1402 RESEARCH ARTICLE www.zookeys.org Launched to accelerate biodiversity research Chemosymbiotic bivalves from the mud volcanoes of the Gulf of Cadiz, NE Atlantic, with descriptions of new species of Solemyidae, Lucinidae and Vesicomyidae 1,† 2,‡ 2,§ Graham Oliver , Clara F. Rodrigues , Marina R. Cunha 1 BioSyB, National Museum of Wales, Cathays Park, Cardiff, CF10 3NP, Wales, UK 2 CESAM, Departa- mento de Biologia, Universidade de Aveiro, Campus Universitário de Santiago, 3810–193 Aveiro, Portugal † urn:lsid:zoobank.org:author:9330128A-D9C0-47E1-991E-438D9B8D4148 ‡ urn:lsid:zoobank.org:author:D54DAA7A-BE73-4E37-B5A1-760517AF1BA5 § urn:lsid:zoobank.org:author:553A98B5-0AE0-424F-9ED5-EC50F129519C Corresponding author: Graham Oliver ([email protected]) Academic editor: Nathalie Yonow | Received 18 April 2011 | Accepted 2 June 2011 | Published 28 June 2011 urn:lsid:zoobank.org:pub:5ECAC0D4-083C-4223-AD2A-01810AA99BCD Citation: Oliver G, Rodrigues CF, Cunha MR (2011) Chemosymbiotic bivalves from the mud volcanoes of the Gulf of Cadiz, NE Atlantic, with descriptions of new species of Solemyidae, Lucinidae and Vesicomyidae. ZooKeys 113: 1–38. doi: 10.3897/zookeys.113.1402 Abstract The chemosymbiotic bivalves collected from the mud volcanoes of the Gulf of Cadiz are reviewed. Of the thirteen species closely associated with chemosynthetic settings two Solemyidae, Solemya (Petrasma) elarraichensis sp. n. and Acharax gadirae sp. n., one Lucinidae, Lucinoma asapheus sp. n., and one Vesi- comyidae, Isorropodon megadesmus sp. n. are described and compared to close relatives of their respec- tive families. -
Appendix a Sarah Tanedo/USFWS Common Tern with Chicks
Appendix A Sarah Tanedo/USFWS Common tern with chicks Animal Species Known or Suspected on Monomoy National Wildlife Refuge Table of Contents Table A.1. Fish Species Known or Suspected at Monomoy National Wildlife Refuge (NWR). ..........A-1 Table A.2. Reptile Species Known or Suspected on Monomoy NWR ............................A-8 Table A.3. Amphibian Species Known or Suspected on Monomoy NWR .........................A-8 Table A.4. Bird Species Known or Suspected on Monomoy NWR ..............................A-9 Table A.5. Mammal Species Known or Suspected on Monomoy NWR.......................... A-27 Table A.6. Butterfly and Moth Species Known or Suspected on Monomoy NWR. .................. A-30 Table A.7. Dragonfly and Damselfly Species Known or Suspected on Monomoy NWR. ............. A-31 Table A.8. Tiger Beetle Species Known or Suspected on Monomoy NWR ....................... A-32 Table A.9. Crustacean Species Known or Suspected on Monomoy NWR. ....................... A-33 Table A.10. Bivalve Species Known or Suspected on Monomoy NWR. ......................... A-34 Table A.11. Miscellaneous Marine Invertebrate Species at Monomoy NWR. .................... A-35 Table A.12. Miscellaneous Terrestrial Invertebrates Known to be Present on Monomoy NWR. ........ A-37 Table A.13. Marine Worms Known or Suspected at Monomoy NWR. .......................... A-37 Literature Cited ................................................................ A-40 Animal Species Known or Suspected on Monomoy National Wildlife Refuge Table A.1. Fish Species Known or Suspected at Monomoy National Wildlife Refuge (NWR). 5 15 4 1 1 2 3 6 6 Common Name Scientific Name Fall (%) (%) Rank Rank NOAA Spring Status Status Listing Federal Fisheries MA Legal Species MA Rarity AFS Status Occurrence Occurrence NALCC Rep. -
Metagenomic Analysis Suggests Broad Metabolic Potential in Extracellular Symbionts of the Bivalve Thyasira Cf
McCuaig et al. Animal Microbiome (2020) 2:7 Animal Microbiome https://doi.org/10.1186/s42523-020-00025-9 RESEARCH ARTICLE Open Access Metagenomic analysis suggests broad metabolic potential in extracellular symbionts of the bivalve Thyasira cf. gouldi Bonita McCuaig1, Lourdes Peña-Castillo1,2 and Suzanne C. Dufour1* Abstract Background: Next-generation sequencing has opened new avenues for studying metabolic capabilities of bacteria that cannot be cultured. Here, we provide a metagenomic description of chemoautotrophic gammaproteobacterial symbionts associated with Thyasira cf. gouldi, a sediment-dwelling bivalve from the family Thyasiridae. Thyasirid symbionts differ from those of other bivalves by being extracellular, and recent work suggests that they are capable of living freely in the environment. Results: Thyasira cf. gouldi symbionts appear to form mixed, non-clonal populations in the host, show no signs of genomic reduction and contain many genes that would only be useful outside the host, including flagellar and chemotaxis genes. The thyasirid symbionts may be capable of sulfur oxidation via both the sulfur oxidation and reverse dissimilatory sulfate reduction pathways, as observed in other bivalve symbionts. In addition, genes for hydrogen oxidation and dissimilatory nitrate reduction were found, suggesting varied metabolic capabilities under a range of redox conditions. The genes of the tricarboxylic acid cycle are also present, along with membrane bound sugar importer channels, suggesting that the bacteria may be mixotrophic. Conclusions: In this study, we have generated the first thyasirid symbiont genomic resources. In Thyasira cf. gouldi, symbiont populations appear non-clonal and encode genes for a plethora of metabolic capabilities; future work should examine whether symbiont heterogeneity and metabolic breadth, which have been shown in some intracellular chemosymbionts, are signatures of extracellular chemosymbionts in bivalves. -
Molluscs: Bivalvia Laura A
I Molluscs: Bivalvia Laura A. Brink The bivalves (also known as lamellibranchs or pelecypods) include such groups as the clams, mussels, scallops, and oysters. The class Bivalvia is one of the largest groups of invertebrates on the Pacific Northwest coast, with well over 150 species encompassing nine orders and 42 families (Table 1).Despite the fact that this class of mollusc is well represented in the Pacific Northwest, the larvae of only a few species have been identified and described in the scientific literature. The larvae of only 15 of the more common bivalves are described in this chapter. Six of these are introductions from the East Coast. There has been quite a bit of work aimed at rearing West Coast bivalve larvae in the lab, but this has lead to few larval descriptions. Reproduction and Development Most marine bivalves, like many marine invertebrates, are broadcast spawners (e.g., Crassostrea gigas, Macoma balthica, and Mya arenaria,); the males expel sperm into the seawater while females expel their eggs (Fig. 1).Fertilization of an egg by a sperm occurs within the water column. In some species, fertilization occurs within the female, with the zygotes then text continues on page 134 Fig. I. Generalized life cycle of marine bivalves (not to scale). 130 Identification Guide to Larval Marine Invertebrates ofthe Pacific Northwest Table 1. Species in the class Bivalvia from the Pacific Northwest (local species list from Kozloff, 1996). Species in bold indicate larvae described in this chapter. Order, Family Species Life References for Larval Descriptions History1 Nuculoida Nuculidae Nucula tenuis Acila castrensis FSP Strathmann, 1987; Zardus and Morse, 1998 Nuculanidae Nuculana harnata Nuculana rninuta Nuculana cellutita Yoldiidae Yoldia arnygdalea Yoldia scissurata Yoldia thraciaeforrnis Hutchings and Haedrich, 1984 Yoldia rnyalis Solemyoida Solemyidae Solemya reidi FSP Gustafson and Reid. -
2014 Annual Report Santa Barbara Museum of Natural History 2014 Was an Exciting Year for the Museum and Sea Center
2014 ANNUAL REPORT SANTA BARBARA MUSEUM OF NATURAL HISTORY 2014 was an exciting year for the Museum and Sea Center. We had strong attendance at both campuses. The Sea Center had over 97,000 visitors last year, the highest on record and we are confident we will pass the 100,000 mark in 2015. Financially, we outperformed our 2014 budget, both on the revenue and on the expense side. And our endowment grew by almost $1 million last year. We unveiled our new tide pool installation at the Sea Center and we opened our Curiosity Lab at the Mission Canyon campus. Both of these new spaces are exciting and transformative peeks into our future. In September, we held our second Symposium on Human Origins and the scientists that came from all over the world to participate drew full houses at each of the two day sessions both at the Museum and downtown at the Lobero Theatre. A number of important collections were also gifted to the Museum. A butterfly collection comprising almost every species found here in California. Another collection consisting of 920 fossil ammonites was gifted to us. Three significant shell collections arrived as well as a number of important rare books that were gifted to the library. Numerous smaller collections also arrived which fill out our holdings. In March of 2014 we submitted our Master Plan and updated Conditional Use Permit application to the City of Santa Barbara; these were unanimously approved by the Planning Commission in early January of 2015 with Elisabeth Fowler, Chair HONORARY tremendous community support. -
A Phylogenetic Backbone for Bivalvia: an RNA-Seq Approach
A phylogenetic backbone for Bivalvia: an RNA-seq approach The Harvard community has made this article openly available. Please share how this access benefits you. Your story matters Citation González, Vanessa L., Sónia C. S. Andrade, Rüdiger Bieler, Timothy M. Collins, Casey W. Dunn, Paula M. Mikkelsen, John D. Taylor, and Gonzalo Giribet. 2015. “A phylogenetic backbone for Bivalvia: an RNA-seq approach.” Proceedings of the Royal Society B: Biological Sciences 282 (1801): 20142332. doi:10.1098/rspb.2014.2332. http:// dx.doi.org/10.1098/rspb.2014.2332. Published Version doi:10.1098/rspb.2014.2332 Citable link http://nrs.harvard.edu/urn-3:HUL.InstRepos:14065405 Terms of Use This article was downloaded from Harvard University’s DASH repository, and is made available under the terms and conditions applicable to Other Posted Material, as set forth at http:// nrs.harvard.edu/urn-3:HUL.InstRepos:dash.current.terms-of- use#LAA A phylogenetic backbone for Bivalvia: an rspb.royalsocietypublishing.org RNA-seq approach Vanessa L. Gonza´lez1,†,So´nia C. S. Andrade1,‡,Ru¨diger Bieler2, Timothy M. Collins3, Casey W. Dunn4, Paula M. Mikkelsen5, Research John D. Taylor6 and Gonzalo Giribet1 1 Cite this article: Gonza´lez VL, Andrade SCS, Museum of Comparative Zoology, Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA Bieler R, Collins TM, Dunn CW, Mikkelsen PM, 2Integrative Research Center, Field Museum of Natural History, Chicago, IL 60605, USA Taylor JD, Giribet G. 2015 A phylogenetic 3Department of Biological Sciences, Florida International University, Miami, FL 33199, USA backbone for Bivalvia: an RNA-seq approach. -
An Overview of Chemosynthetic Symbioses in Bivalves from the North Atlantic and Mediterranean Sea S
An overview of chemosynthetic symbioses in bivalves from the North Atlantic and Mediterranean Sea S. Duperron, S. M. Gaudron, C. Rodrigues, M. R. Cunha, C. Decker, K. Olu To cite this version: S. Duperron, S. M. Gaudron, C. Rodrigues, M. R. Cunha, C. Decker, et al.. An overview of chemosyn- thetic symbioses in bivalves from the North Atlantic and Mediterranean Sea. Biogeosciences, European Geosciences Union, 2013, 10 (5), pp.3241-3267. 10.5194/bg-10-3241-2013. hal-01542777 HAL Id: hal-01542777 https://hal.sorbonne-universite.fr/hal-01542777 Submitted on 20 Jun 2017 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Distributed under a Creative Commons Attribution| 4.0 International License EGU Journal Logos (RGB) Open Access Open Access Open Access Advances in Annales Nonlinear Processes Geosciences Geophysicae in Geophysics Open Access Open Access Natural Hazards Natural Hazards and Earth System and Earth System Sciences Sciences Discussions Open Access Open Access Atmospheric Atmospheric Chemistry Chemistry and Physics and Physics Discussions Open Access Open Access Atmospheric Atmospheric Measurement Measurement Techniques Techniques Discussions Open Access Biogeosciences, 10, 3241–3267, 2013 Open Access www.biogeosciences.net/10/3241/2013/ Biogeosciences doi:10.5194/bg-10-3241-2013 Biogeosciences Discussions © Author(s) 2013.