Ecophysiology and Conservation: the Contribution of Energetics—Introduction to the Symposium Robert D

Total Page:16

File Type:pdf, Size:1020Kb

Ecophysiology and Conservation: the Contribution of Energetics—Introduction to the Symposium Robert D 1088 Ecophysiology and conservation: The contribution of energetics—introduction to the symposium Robert D. Stevenson1 Department of Biology, University of Massachusetts–Boston, Boston, MA 02125-3393, USA Synopsis Animal physiologists have begun making contributions to conservation biology based on their knowledge of endocrinology, immunology, and sensory biology. Contributions to this symposium use the perspective of energy and mass balance to examine questions about habitat usage, activity times, competition, foraging, reproduction, and body condition. Physiological constraints or requirements sculpt the behavioral and life history choices of individuals and provide mechanistic linkages with population processes and conservation policies. Downloaded from https://academic.oup.com/icb/article/46/6/1088/719300 by guest on 27 September 2021 Introduction out of a pragmatic desire to stem the loss of our Preventing the loss of biodiversity is one of the great natural heritage. The Society for Conservation challenges facing humanity today (Wilson 2002). The Biology, now a worldwide organization with 10 000 earth is currently experiencing its sixth great mass members, was officially founded just 20 years ago. The extinction, but unlike the previous events this one is development of conservation science has focused at uniquely caused by human-related activities (Leakey the genetic, population, landscape, and ecosystem 1996). Overharvesting (Flannery 2002; Martin 2005) levels (Meffe and Carroll 1997; Hunter 2001; Soule was the initial driver, but today anthropogenic-induced and Orians 2001; Primack 2006). Curiously, con- climatic change, habitat loss, toxic substances, and servation practice has placed less emphasis on the invasive species (including novel diseases) all contribute individual organism and how it is affected by (Vitousek and others 1997; Lubchenco 1998; environmental change, despite the tools available McMichael and Kovats 2000; Wilson 2002). Cultures from decades of ecophysiological research. Recently, around the world have had complex relationships with however, physiologists, especially reproductive physi- nature, and no single cause is at the root of environ- ologists, have been making contributions (Clemmons mental degradation and loss (Diamond 2005). The and Buchholz 1997; Berger and others 1999; Gordon growth economy of present-day modern societies (Daly and Bartol 2004; Carey 2005; Stevenson and others 1996) shows that society as a whole does not value the 2005; Wikelski and Cooke 2006). For instance, in vital role of the environment, especially ecosystem the past 3 years the Society for Integrative and services (Daily 1997). However, across organizational Comparative Biology has sponsored 4 symposia that scales from the local to the global, individuals, NGOs, have related organismal level studies to conservation and governmental agencies are focusing on critical biology (2004—EcoPhysiology and Conservation: The environmental problems such as climatic change, Contribution of Endocrinology and Immunology; invasive species, habitat loss, water shortages, and 2005—Zoo-based Research and Conservation; 2006— pollution. Efforts by these organizations are underway Ecological Immunology: Recent Advances and to link scientific understanding to policy (Ludwig 2001; Applications for Conservation and Public Health; and Ludwig and others 2001; Folke and others 2005). this symposium) (for program listings see meetings link Scientists are key participants in these organizations and at the society Web site, www.sicb.org/). they have responded to the global environmental It is no surprise that an energetics perspective degradation with the creation of several new disciplines would be of help in conservation biology because including environmental toxicology, global change stud- energy is needed to sustain life and energetics is used ies, sustainable development, and conservation biology. as an organizing perspective in many areas of Conservation biology is a nascent, applied science, biological research. The study of energy flows, sources, born in the late 1960s (Carson 1962; Ehrenfeld 1970) and sinks, across levels of biological organization From the symposium “Ecophysiology and Conservation: The Contributions of Energetics” presented at the annual meeting of the Society for Integrative and Comparative Biology, January 4–8, 2006, at Orlando, Florida. 1 E-mail: [email protected] Integrative and Comparative Biology, volume 46, number 6, pp. 1088–1092 doi:10.1093/icb/icl053 Advance Access publication October 18, 2006 Ó The Author 2006. Published by Oxford University Press on behalf of the Society for Integrative and Comparative Biology. All rights reserved. For permissions please email: [email protected]. Ecophysiology, energetics, and conservation 1089 provides useful insights into organization and func- extended droughts frogs could dehydrate even under tion. An energetics approach allows scientists to leaf litter. rank the quality of habitats or to ask how individual Harrison and colleagues presented an integrative time and energy budgets translate into population overview of the invasion of the European and African changes. Studies may be focused—such as asking honeybees, summarizing genetic, behavioral, and phy- if there is sufficient energy for reproduction—or may siological data. There are several ecotones between the be more expansive—such as examining coupled Africanized races (which now are dominant through- material and energy flows to assess tradeoffs between out the neotropics) and the European bees (which are reproduction and survival. This symposium provided dominant in the temperate zone). The authors ask a diverse and rich set of examples. The articles cover what individual genetic, behavioral, and physiological topics about reproductive energetics, migration, traits contribute to the success of each group. They feeding ecology, metabolic rates, thermoregulation, suggest that bees of strictly European origin have an and water loss. In addition, presentations covered advantage in cooler climates because of a behavioral Downloaded from https://academic.oup.com/icb/article/46/6/1088/719300 by guest on 27 September 2021 a diverse range of taxa including fence lizards, wood preference for honey over pollen that enhances their frogs, Atlantic bluefin tuna, honeybees, Monarch energy stores and increases the probability of survival butterflies, the Hawaiian po’ouli, and desert tortoises. over winter. They also suggest that increased winter Most are case studies providing linkages between survival is linked to the higher hemolymph vitel- physiology and population processes, while contribu- logenin levels found in European bees. In warmer tions from McNab and from Stevenson and climates Africanized bees are the better competitors Woods are more comparative and synthetic. because of (1) a preference for pollen over nectar, Techniques span many levels of biological organiza- which increases nutrient uptake and brood produc- tion from genetic analysis to biogeography. The tion, and (2) their larger and more energetically following section provides more detail about costly flight relative to body size, which makes them each article. better fliers and thereby increases their foraging intake, mating success and dispersal. Using distribu- tional patterns and climatic data from South America, Symposium articles Harrison and colleagues forecast that hybrid bees will In the first article, O’Conner and colleagues apply invade about 200 km further north to where biophysical models at the landscape level. The maximum January temperatures are 15–16C. approach of biophysical ecology combines microme- For many years Lincoln Brower and his colleagues terological data with thermal properties and physio- have documented one of nature’s greatest spectacles— logical data of organisms, linked by mass and thermal the migration of Monarch butterflies from Mexico to balance equations, to predict locations of animals or the United States and Canada and back. They have sources of water and food in the environment (Gates unraveled much of the behavior and ecology of these 1980). O’Conner and colleagues present 2 case studies. migratory populations, and documented several of the In the first they address questions about the impacts threats to their continued survival, especially the loss of climatic change on the canyon lizard (Sceloperous of the high elevation forests in 12 or so overwintering merriami). They use extensive field data to show that sites in the Sierra Madre Oriental Mountains of a site of intermediate elevation has the highest rate Mexico. We know that during their winter resting of reproductive success based on modeling balance period, butterflies do not feed but instead metabolize of thermal and chemical energy. The predicted fat reserves for their energy source. In this article, body temperatures of the lizards determine energy Brower and colleagues update the energetic aspects of expenditure and the thermal environment constrains migration and overwintering biology of the Monarchs, both the length of daily activity and foraging time and analyzing fat data from 17 published and unpublished thus access to food. Calculations suggest that the sources. They concluded that Monarchs are optimistic thermal sensitivity of digestive rates may be very fuelers during migration (fat levels between 0 and important. In the second example, O’Conner and 150 mg) and that they do not gain large amounts of colleagues
Recommended publications
  • Integrative and Comparative Biology Integrative and Comparative Biology, Volume 58, Number 4, Pp
    Integrative and Comparative Biology Integrative and Comparative Biology, volume 58, number 4, pp. 605–622 doi:10.1093/icb/icy088 Society for Integrative and Comparative Biology SYMPOSIUM INTRODUCTION The Temporal and Environmental Context of Early Animal Evolution: Considering All the Ingredients of an “Explosion” Downloaded from https://academic.oup.com/icb/article-abstract/58/4/605/5056706 by Stanford Medical Center user on 15 October 2018 Erik A. Sperling1 and Richard G. Stockey Department of Geological Sciences, Stanford University, 450 Serra Mall, Building 320, Stanford, CA 94305, USA From the symposium “From Small and Squishy to Big and Armored: Genomic, Ecological and Paleontological Insights into the Early Evolution of Animals” presented at the annual meeting of the Society for Integrative and Comparative Biology, January 3–7, 2018 at San Francisco, California. 1E-mail: [email protected] Synopsis Animals originated and evolved during a unique time in Earth history—the Neoproterozoic Era. This paper aims to discuss (1) when landmark events in early animal evolution occurred, and (2) the environmental context of these evolutionary milestones, and how such factors may have affected ecosystems and body plans. With respect to timing, molecular clock studies—utilizing a diversity of methodologies—agree that animal multicellularity had arisen by 800 million years ago (Ma) (Tonian period), the bilaterian body plan by 650 Ma (Cryogenian), and divergences between sister phyla occurred 560–540 Ma (late Ediacaran). Most purported Tonian and Cryogenian animal body fossils are unlikely to be correctly identified, but independent support for the presence of pre-Ediacaran animals is recorded by organic geochemical biomarkers produced by demosponges.
    [Show full text]
  • Phylogenetic Comparative Methods: a User's Guide for Paleontologists
    Phylogenetic Comparative Methods: A User’s Guide for Paleontologists Laura C. Soul - Department of Paleobiology, National Museum of Natural History, Smithsonian Institution, Washington, DC, USA David F. Wright - Division of Paleontology, American Museum of Natural History, Central Park West at 79th Street, New York, New York 10024, USA and Department of Paleobiology, National Museum of Natural History, Smithsonian Institution, Washington, DC, USA Abstract. Recent advances in statistical approaches called Phylogenetic Comparative Methods (PCMs) have provided paleontologists with a powerful set of analytical tools for investigating evolutionary tempo and mode in fossil lineages. However, attempts to integrate PCMs with fossil data often present workers with practical challenges or unfamiliar literature. In this paper, we present guides to the theory behind, and application of, PCMs with fossil taxa. Based on an empirical dataset of Paleozoic crinoids, we present example analyses to illustrate common applications of PCMs to fossil data, including investigating patterns of correlated trait evolution, and macroevolutionary models of morphological change. We emphasize the importance of accounting for sources of uncertainty, and discuss how to evaluate model fit and adequacy. Finally, we discuss several promising methods for modelling heterogenous evolutionary dynamics with fossil phylogenies. Integrating phylogeny-based approaches with the fossil record provides a rigorous, quantitative perspective to understanding key patterns in the history of life. 1. Introduction A fundamental prediction of biological evolution is that a species will most commonly share many characteristics with lineages from which it has recently diverged, and fewer characteristics with lineages from which it diverged further in the past. This principle, which results from descent with modification, is one of the most basic in biology (Darwin 1859).
    [Show full text]
  • Cognition, Biology and Evolution of Musicality Rstb.Royalsocietypublishing.Org Henkjan Honing1, Carel Ten Cate2, Isabelle Peretz3 and Sandra E
    Downloaded from http://rstb.royalsocietypublishing.org/ on February 2, 2015 Without it no music: cognition, biology and evolution of musicality rstb.royalsocietypublishing.org Henkjan Honing1, Carel ten Cate2, Isabelle Peretz3 and Sandra E. Trehub4 1Amsterdam Brain and Cognition (ABC), Institute for Logic, Language and Computation (ILLC), University of Amsterdam, PO Box 94242, 1090 CE Amsterdam, The Netherlands 2Institute of Biology Leiden (IBL), Leiden Institute for Brain and Cognition (LIBC), Leiden University, Introduction PO Box 9505, 2300 RA Leiden, The Netherlands 3Center for Research on Brain, Language and Music and BRAMS, Department of Psychology, University of Cite this article: Honing H, ten Cate C, Peretz Montreal, 1420 Mount Royal Boulevard, Montreal, Canada H3C 3J7 4 I, Trehub SE. 2015 Without it no music: Department of Psychology, University of Toronto Mississauga, 3359 Mississauga Road, Mississauga, Canada L5L 1C6 cognition, biology and evolution of musicality. Phil. Trans. R. Soc. B 370: 20140088. Musicality can be defined as a natural, spontaneously developing trait based http://dx.doi.org/10.1098/rstb.2014.0088 on and constrained by biology and cognition. Music, by contrast, can be defined as a social and cultural construct based on that very musicality. One contribution of 12 to a theme issue One critical challenge is to delineate the constituent elements of musicality. What biological and cognitive mechanisms are essential for perceiving, appre- ‘Biology, cognition and origins of musicality’. ciating and making music? Progress in understanding the evolution of music cognition depends upon adequate characterization of the constituent mechan- Subject Areas: isms of musicality and the extent to which they are present in non-human behaviour, evolution, cognition, neuroscience, species.
    [Show full text]
  • Clearing the Highest Hurdle: Human-Based Case Studies Broaden Students’ Knowledge of Core Evolutionary Concepts
    The Journal of Effective Teaching an online journal devoted to teaching excellence Clearing the highest hurdle: Human-based case studies broaden students’ knowledge of core evolutionary concepts Alexander J. Werth1 Hampden-Sydney College, Hampden-Sydney, VA 23943 Abstract An anonymous survey instrument was used for a ten year study to gauge college student attitudes toward evolution. Results indicate that students are most likely to accept evolu- tion as a historical process for change in physical features of non-human organisms. They are less likely to accept evolution as an ongoing process that shapes all traits (including biochemical, physiological, and behavioral) in humans. Students who fail to accept the factual nature of human evolution do not gain an accurate view of evolution, let alone modern biology. Fortunately, because of students’ natural curiosity about their bodies and related topics (e.g., medicine, vestigial features, human prehistory), a pedagogical focus on human evolution provides a fun and effective way to teach core evolutionary concepts, as quantified by the survey. Results of the study are presented along with useful case studies involving human evolution. Keywords: Survey, pedagogy, biology, evolution, Darwin. All science educators face pedagogical difficulties, but when considering the social rami- fications of scientific ideas, few face as great a challenge as biology teachers. Studies consistently show more than half of Americans reject any concept of biological evolution (Harris Poll, 2005, Miller et al., 2006). Students embody just such a cross-section of soci- ety. Much ink has been spilled explaining how best to teach evolution, particularly to unwilling students (Cavallo and McCall, 2008, Nelson, 2008).
    [Show full text]
  • Comparative Thinking in Biology
    Comparative Thinking in Biology Adrian Currie This material has been published in the Cambridge University Press series Elements in the Philosophy of Biology, edited by Grant Ramsey and Michael Ruse. This version is free to view and download for personal use only. Not for re-distribution, re-sale or use in derivative works. © Adrian Currie. Acknowledgements I’m grateful to Marta Halina, Sabina Leonelli, Alison McConwell, Aaron Novick, Trevor Pearce, Russell Powell, William Wong and two anonymous referees for extremely useful and kind feedback on draft material. Also thanks to Grant Ramsey and Michael Ruse. Ideas from this element were presented to Exeter’s Cognition and Culture reading group, at Philosophy of Biology at Dolphin Beach 13 and at the Recent Trends in Philosophy of Biology conference in Bilkent; thanks to the audiences there. Many thanks to Kimberly Brumble for the wonderful illustrations. Some of the research for this Element was funded by the Templeton World Charity Foundation. Dedicated to the incomparable Kate. Table of Contents Cats versus Dogs............................................................................................................................... 1 1. Comparative Thinking .......................................................................................................... 14 1.1 Comparative Concepts .................................................................................................... 14 1.2 Two Kinds of Inference ...................................................................................................
    [Show full text]
  • Integrative and Comparative Biology Integrative and Comparative Biology, Volume 59, Number 4, Pp
    Integrative and Comparative Biology Integrative and Comparative Biology, volume 59, number 4, pp. 856–863 doi:10.1093/icb/icz132 Society for Integrative and Comparative Biology SYMPOSIUM INTRODUCTION Beyond the Powerhouse: Integrating Mitonuclear Evolution, Physiology, and Theory in Comparative Biology Justin C. Havird,* Ryan J. Weaver,*,† Liliana Milani ,‡ Fabrizio Ghiselli ,‡ Ryan Greenway,§ Downloaded from https://academic.oup.com/icb/article/59/4/856/5542403 by Auburn University user on 30 April 2021 Adam J. Ramsey,¶ Ana G. Jimenez ,k Damian K. Dowling ,# Wendy R. Hood ,† Kristi L. Montooth ,** Suzanne Estes,†† Patricia M. Schulte,‡‡ Inna M. Sokolova ,§§,¶¶ and Geoffrey E. Hill 1,† *Department of Integrative Biology, University of Texas, Austin, TX 78712, USA; †Department of Biological Sciences, Auburn University, Auburn, AL 36849, USA; ‡Department of Biological, Geological and Environmental Sciences (BiGeA), University of Bologna, Bologna, 40126, Italy; §Division of Biology, Kansas State University, Manhattan, KS 66506, USA; ¶Department of Biological Sciences, University of Memphis, Memphis, TN 38152, USA; kDepartment of Biology, Colgate University, Hamilton, NY 13346, USA; #School of Biological Sciences, Monash University, Clayton, Victoria 3800, Australia; **School of Biological Sciences, University of Nebraska-Lincoln, Lincoln, NE 68502, USA; ††Department of Biology, Portland State University, Portland, OR 97201, USA; ‡‡Department of Zoology, University of British Columbia, Vancouver, BC V6T 1Z4, Canada; §§Department of Marine Biology, Institute of Biological Sciences, University of Rostock, Rostock, Germany; ¶¶Department of Maritime Systems, Interdisciplinary Faculty, University of Rostock, Rostock, Germany From the symposium “Beyond the powerhouse: integrating mitonuclear evolution, physiology, and theory in comparative biology” presented at the annual meeting of the Society for Integrative and Comparative Biology, January 3–7, 2019 at Tampa, Florida.
    [Show full text]
  • Phylogenetic Systematics As the Basis of Comparative Biology
    SMITHSONIAN CONTRIBUTIONS TO BOTANY NUMBER 73 Phylogenetic Systematics as the Basis of Comparative Biology KA. Funk and Daniel R. Brooks SMITHSONIAN INSTITUTION PRESS Washington, D.C. 1990 ABSTRACT Funk, V.A. and Daniel R. Brooks. Phylogenetic Systematics as the Basis of Comparative Biology. Smithsonian Contributions to Botany, number 73, 45 pages, 102 figures, 12 tables, 199O.-Evolution is the unifying concept of biology. The study of evolution can be approached from a within-lineage (microevolution) or among-lineage (macroevolution) perspective. Phylogenetic systematics (cladistics) is the appropriate basis for all among-liieage studies in comparative biology. Phylogenetic systematics enhances studies in comparative biology in many ways. In the study of developmental constraints, the use of such phylogenies allows for the investigation of the possibility that ontogenetic changes (heterochrony) alone may be sufficient to explain the perceived magnitude of phenotypic change. Speciation via hybridization can be suggested, based on the character patterns of phylogenies. Phylogenetic systematics allows one to examine the potential of historical explanations for biogeographic patterns as well as modes of speciation. The historical components of coevolution, along with ecological and behavioral diversification, can be compared to the explanations of adaptation and natural selection. Because of the explanatory capabilities of phylogenetic systematics, studies in comparative biology that are not based on such phylogenies fail to reach their potential. OFFICIAL PUBLICATION DATE is handstamped in a limited number of initial copies and is recorded in the Institution's annual report, Srnithonhn Year. SERIES COVER DESIGN: Leaf clearing from the katsura tree Cercidiphyllumjaponicum Siebold and Zuccarini. Library of Cmgrcss Cataloging-in-PublicationDiaa Funk, V.A (Vicki A.), 1947- PhylogmttiC ryrtcmaticsas tk basis of canpamtive biology / V.A.
    [Show full text]
  • Comparative Developmental Psychology: How Is Human Cognitive Development Unique?
    Evolutionary Psychology www.epjournal.net – 2014. 12(2): 448-473 ¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯ Original Article Comparative Developmental Psychology: How is Human Cognitive Development Unique? Alexandra G. Rosati, Department of Psychology, Yale University, New Haven, CT, USA. Email: [email protected] (Corresponding author). Victoria Wobber, Department of Psychology, Harvard University, Cambridge, MA, USA. Kelly Hughes, Department of Brain and Cognitive Sciences, University of Rochester, Rochester, NY, USA. Laurie R. Santos, Department of Psychology, Yale University, New Haven, CT, USA. Abstract: The fields of developmental and comparative psychology both seek to illuminate the roots of adult cognitive systems. Developmental studies target the emergence of adult cognitive systems over ontogenetic time, whereas comparative studies investigate the origins of human cognition in our evolutionary history. Despite the long tradition of research in both of these areas, little work has examined the intersection of the two: the study of cognitive development in a comparative perspective. In the current article, we review recent work using this comparative developmental approach to study non-human primate cognition. We argue that comparative data on the pace and pattern of cognitive development across species can address major theoretical questions in both psychology and biology. In particular, such integrative research will allow stronger biological inferences about the function of developmental change, and will be critical in addressing how humans come to acquire species-unique cognitive abilities. Keywords: comparative development, primate cognition, heterochrony, human adaptation ¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯¯ Introduction Human behavior is strikingly different from that of other animals. We speak language, routinely cooperate with others to reach complex shared goals, engage in abstract reasoning and scientific inquiry, and learn a rich set of sophisticated cultural behaviors from others.
    [Show full text]
  • How Language Adapts to the Environment: an Evolutionary, Experimental Approach
    How Language Adapts to the Environment: An Evolutionary, Experimental Approach Jonas Nölle 2021 Submitted in fulfilment of the degree of Doctor of Philosophy to School of Philosophy, Psychology and Language Sciences University of Edinburgh To my parents and grandparents ii Lay Summary Why do humans speak different languages instead of the same? Is this simply the outcome of arbitrary cultural conventions that we decided upon, or can linguistic diversity be explained by other factors? This thesis explores whether human languages adapt to their environment in a similar way to organisms in biological evolution. To test whether this is the case, I conducted two series of experiments. In the first series pairs of participants came into the lab and had to play a game where they could only use their hands to communicate about cartoon pictures. In two experiments we found that the way in which they system- atically picked up traits from these cartoon pictures, and which traits they chose, depended on the context, for example how many targets they were communicating about, and whether they could see the targets or had to recall them from memory. This suggests that a fundamental property of human languages, the ability to mark systematic categories depends, to some extent, on the environment in which these languages develop, which could lead to diversity. A second series of experiments made use of virtual reality games, where participants had to communicate about the location of orbs. Different languages have different preferences for how they express spatial relations, e.g., the orb is to the left of you vs the orb is uphill from you.
    [Show full text]
  • Comparative Biology: Beyond Sequence Analysis Itay Tirosh1, Yonatan Bilu1 and Naama Barkai1,2
    Comparative biology: beyond sequence analysis Itay Tirosh1, Yonatan Bilu1 and Naama Barkai1,2 Comparative analysis is a fundamental tool in biology. Whereas most comparative studies focus on conserved Conservation among species greatly assists the detection properties as means for characterizing functional ele- and characterization of functional elements, whereas ments, inter-species differences are also of interest. inter-species differences are probably the best indicators These differences are arguably the best indicators of of biological adaptation. Traditionally, comparative evolutionary history and provide much information about approaches were applied to the analysis of genomic species-specific adaptations. Identifying such differences sequences. With the growing availability of functional is thus central to our search for what makes us human and genomic data, comparative paradigms are now being how biological diversity is generated. extended also to the study of other functional attributes, most notably the gene expression. Here we review recent Technological advances over the past decade have led to works applying comparative analysis to large-scale gene the accumulation of genome-scale data describing not expression datasets and discuss the central principles and only gene sequence but also functional properties in- challenges of such approaches. cluding gene expression, protein–protein interactions, Addresses and the binding of transcription factors to DNA. Such 1 Department of Molecular Genetics, Weizmann Institute of Science,
    [Show full text]
  • Felsenstein's 'Phylogenies A
    Manuscript type: Historical comment Title: Revisiting a Key Innovation in Evolutionary Biology: Felsenstein’s ‘Phylogenies and the Comparative Method’ Authors: Raymond B. Huey1,*, Theodore Garland, Jr.2, and Michael Turelli3 1 Department of Biology, University of Washington, Seattle, Washington 98195; 2 Department of Evolution, Ecology, and Organismal Biology, University of California, Riverside, California 92521; 3 Department of Evolution and Ecology, University of California, Davis, California 95616 Running Head: Revisiting Felsenstein (1985) Appendices: A, B, C * Corresponding author: [email protected] ABSTRACT: The comparative method has long been a fundamental exploratory tool in evolutionary biology, but this venerable approach was revolutionized in 1985, when Felsenstein published “Phylogenies and the Comparative Method” in The American Naturalist. This paper forced comparative biologists to start thinking phylogenetically when conducting statistical analyses of correlated trait evolution, rather than simply applying conventional statistical methods that ignore evolutionary relationships. It did so by introducing a novel analytical method (phylogenetically “independent contrasts”) that required a phylogenetic topology with branch lengths and that assumed a Brownian motion model of trait evolution. Independent contrasts enabled comparative biologists to avoid the statistical dilemma of non-independence of species values, arising from shared ancestry, but came at the cost of needing a detailed phylogeny and of accepting a specific model of character change. Nevertheless, this paper not only revitalized comparative biology, but even encouraged studies aimed at estimating phylogenies. Felsenstein’s characteristically lucid and concise statement of the problem (illustrated with powerful graphics), coupled with an oncoming flood of new molecular data and techniques for estimating phylogenies, led Felsenstein ‘85 to become the second most cited paper in the history of this journal.
    [Show full text]
  • 'Nothing Make Sense Except in the Light of Evolution'?
    To appear in Acta Biotheoretica 1 In what sense does ‘nothing make sense except in the light of 1 evolution’? Paul E. Griffiths Department of Philosophy, University of Sydney, NSW 2006, Australia & ESRC Centre for Genomics in Society, University of Exeter, Exeter, EX4 4PJ, UK [email protected] Abstract Dobzhansky argued that biology only makes sense if life on earth has a shared history. But his dictum is often reinterpreted to mean that biology only makes sense in the light of adaptation. Some philosophers of science have argued in this spirit that all work in ‘proximal’ biosciences such as anatomy, physiology and molecular biology must be framed, at least implicitly, by the selection histories of the organisms under study. Others have denied this and have proposed non-evolutionary ways in which biologists can frame these investigations. This paper argues that an evolutionary perspective is indeed necessary, but that it must be a forward-looking perspective informed by a general understanding of the evolutionary process, not a backward-looking perspective informed by the specific evolutionary history of the species being studied. Interestingly, it turns out that there are aspects of proximal biology that even a creationist cannot study except in the light of a theory of their effect on future evolution. 1. Dobzhansky’s dictum Classic scientific articles are often more cited than read. ‘Nothing in biology makes sense except in the light of evolution’ by the Ukranian-American geneticist Theodosius Dobzhansky (1973) is no exception. It argues that the observed diversity of life and its distribution on the earth’s surface make no sense when viewed as the result of the special creation of each species by God.
    [Show full text]