Thesis Mapping of Possible Corridors for Javan
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Panthera Pardus, Leopard
The IUCN Red List of Threatened Species™ ISSN 2307-8235 (online) IUCN 2008: T15954A5329380 Panthera pardus, Leopard Assessment by: Henschel, P., Hunter, L., Breitenmoser, U., Purchase, N., Packer, C., Khorozyan, I., Bauer, H., Marker, L., Sogbohossou, E. & Breitenmoser- Wursten, C. View on www.iucnredlist.org Citation: Henschel, P., Hunter, L., Breitenmoser, U., Purchase, N., Packer, C., Khorozyan, I., Bauer, H., Marker, L., Sogbohossou, E. & Breitenmoser-Wursten, C. 2008. Panthera pardus. The IUCN Red List of Threatened Species 2008: e.T15954A5329380. http://dx.doi.org/10.2305/IUCN.UK.2008.RLTS.T15954A5329380.en Copyright: © 2015 International Union for Conservation of Nature and Natural Resources Reproduction of this publication for educational or other non-commercial purposes is authorized without prior written permission from the copyright holder provided the source is fully acknowledged. Reproduction of this publication for resale, reposting or other commercial purposes is prohibited without prior written permission from the copyright holder. For further details see Terms of Use. The IUCN Red List of Threatened Species™ is produced and managed by the IUCN Global Species Programme, the IUCN Species Survival Commission (SSC) and The IUCN Red List Partnership. The IUCN Red List Partners are: BirdLife International; Botanic Gardens Conservation International; Conservation International; Microsoft; NatureServe; Royal Botanic Gardens, Kew; Sapienza University of Rome; Texas A&M University; Wildscreen; and Zoological Society of London. If you see any errors or have any questions or suggestions on what is shown in this document, please provide us with feedback so that we can correct or extend the information provided. THE IUCN RED LIST OF THREATENED SPECIES™ Taxonomy Kingdom Phylum Class Order Family Animalia Chordata Mammalia Carnivora Felidae Taxon Name: Panthera pardus (Linnaeus, 1758) Synonym(s): • Felis pardus Linnaeus, 1758 Regional Assessments: • Mediterranean Infra-specific Taxa Assessed: • Panthera pardus ssp. -
Supplementary Table 1: List of 76 Mt Genomes for Birds
Supplementary Table 1: List of 76 mt genomes for birds. accession Ka/Ks Ka Ks species speed(m/s) Ln S group * * number 13 mt genes Acrocephalus scirpaceus NC 010227 0.0464 0.0288 0.6228 6.6d 1.8871 2 Alectura lathami NC 007227 0.0343 0.032 0.9311 2 Anas platyrhynchos NC 009684 0.0252 0.0073 0.2873 18.5a 2.9178 2 Anomalopteryx didiformis (die out) NC 002779 0.0508 0.0027 0.054 1 Anser albifrons NC 004539 0.0468 0.0088 0.1856 16.1a 2.7788 2 Anseranas semipalmata NC 005933 0.0364 0.0207 0.5628 2 Apteryx haastii NC 002782 0.0599 0.0273 0.4561 1 Apus apus NC 008540 0.0401 0.0241 0.6431 10.6a 2.3609 2 Archilochus colubris NC 010094 0.0397 0.0382 0.9242 2 Ardea novaehollandiae NC 008551 0.0423 0.0067 0.1552 10.2c# 2.322 2 Arenaria interpres NC 003712 0.0378 0.0213 0.581 2 Aythya americana NC 000877 0.0309 0.0092 0.2987 24.4b 3.1946 2 Bambusicola thoracica* EU165706 0.0503 0.0144 0.2872 1 Branta canadensis NC 007011 0.0444 0.0092 0.206 16.7a 2.8154 2 Buteo buteo NC 003128 0.049 0.0167 0.3337 11.6a 2.451 2 Casuarius casuarius NC 002778 0.028 0.0085 0.3048 13.9f 2.6319 2 Cathartes aura * * * * NC 007628 0.0468 0.0239 0.4676 10.6c 2.3609 2 Ciconia boyciana NC 002196 0.0539 0.0031 0.0563 2 Ciconia ciconia NC 002197 0.0501 0.0029 0.0572 9.1d 2.2083 2 Cnemotriccus fuscatus NC 007975 0.0369 0.038 1.0476 2 Corvus frugilegus NC 002069 0.0428 0.0298 0.6526 13a 2.5649 2 Coturnix chinensis NC 004575 0.0325 0.0122 0.3762 2 Coturnix japonica NC 003408 0.0432 0.0128 0.2962 2 Cygnus columbianus NC 007691 0.0327 0.0089 0.2702 18.5a 2.9178 2 Dinornis giganteus -
Supporting Information
Supporting Information Bender et al. 10.1073/pnas.0802779105 Table S1. Species names and calculated numeric values pertaining to Fig. 1 Mitochondrially Nuclear encoded Nuclear encoded Species name encoded methionine, % methionine, % methionine, corrected, % Animals Primates Cebus albifrons 6.76 Cercopithecus aethiops 6.10 Colobus guereza 6.73 Gorilla gorilla 5.46 Homo sapiens 5.49 2.14 2.64 Hylobates lar 5.33 Lemur catta 6.50 Macaca mulatta 5.96 Macaca sylvanus 5.96 Nycticebus coucang 6.07 Pan paniscus 5.46 Pan troglodytes 5.38 Papio hamadryas 5.99 Pongo pygmaeus 5.04 Tarsius bancanus 6.74 Trachypithecus obscurus 6.18 Other mammals Acinonyx jubatus 6.86 Artibeus jamaicensis 6.43 Balaena mysticetus 6.04 Balaenoptera acutorostrata 6.17 Balaenoptera borealis 5.96 Balaenoptera musculus 5.78 Balaenoptera physalus 6.02 Berardius bairdii 6.01 Bos grunniens 7.04 Bos taurus 6.88 2.26 2.70 Canis familiaris 6.54 Capra hircus 6.84 Cavia porcellus 6.41 Ceratotherium simum 6.06 Choloepus didactylus 6.23 Crocidura russula 6.17 Dasypus novemcinctus 7.05 Didelphis virginiana 6.79 Dugong dugon 6.15 Echinops telfairi 6.32 Echinosorex gymnura 6.86 Elephas maximus 6.84 Equus asinus 6.01 Equus caballus 6.07 Erinaceus europaeus 7.34 Eschrichtius robustus 6.15 Eumetopias jubatus 6.77 Felis catus 6.62 Halichoerus grypus 6.46 Hemiechinus auritus 6.83 Herpestes javanicus 6.70 Hippopotamus amphibius 6.50 Hyperoodon ampullatus 6.04 Inia geoffrensis 6.20 Bender et al. www.pnas.org/cgi/content/short/0802779105 1of10 Mitochondrially Nuclear encoded Nuclear encoded Species -
The Illegal Exploitation of the Javan Leopard (
Nature Conservation 43: 25–39 (2021) A peer-reviewed open-access journal doi: 10.3897/natureconservation.43.59399 RESEARCH ARticlE https://natureconservation.pensoft.net Launched to accelerate biodiversity conservation The illegal exploitation of the Javan Leopard (Panthera pardus melas) and Sunda Clouded Leopard (Neofelis diardi) in Indonesia Lalita Gomez1,2, Chris R. Shepherd1 1 Monitor Conservation Research Society, Big Lake, Canada 2 Oxford Wildlife Trade Research Group, Oxford Brookes University, Oxford, UK Corresponding author: Chris R. Shepherd ([email protected]) Academic editor: M. Auliya | Received 6 October 2020 | Accepted 15 January 2021 | Published 22 March 2021 http://zoobank.org/17D9AAB6-8A94-4B5A-932F-6633FAD5D42B Citation: Gomez L, Shepherd CR (2021) The illegal exploitation of the Javan Leopard (Panthera pardus melas) and Sunda Clouded Leopard (Neofelis diardi) in Indonesia. Nature Conservation 43: 25–39. https://doi.org/10.3897/ natureconservation.43.59399 Abstract Indonesia is home to the Javan Leopard (Panthera pardus melas) and the Sunda Clouded Leopard (Neofelis diardi), both of which are threatened by habitat loss, human-wildlife conflict issues and the illegal wildlife trade. Leopards and clouded leopards are threatened by the illegal wildlife trade across their range, how- ever, very little is known of the illegal trade in these two species in Indonesia, or of the efforts made to tackle this crime. Both the Javan Leopard and Sunda Clouded Leopard are protected species in Indonesia and both species are listed in Appendix I of the Convention on International Trade in Endangered Species of Wild Fauna and Flora (CITES), meaning commercial international trade is generally prohibited. To better understand the trade, and efforts to end this trade, we collected records of seizures and prosecutions relating to Javan Leopards and Sunda Clouded Leopards in Indonesia for the period 2011–2019. -
Panthera Pardus) and Its Extinct Eurasian Populations Johanna L
Paijmans et al. BMC Evolutionary Biology (2018) 18:156 https://doi.org/10.1186/s12862-018-1268-0 RESEARCH ARTICLE Open Access Historical biogeography of the leopard (Panthera pardus) and its extinct Eurasian populations Johanna L. A. Paijmans1* , Axel Barlow1, Daniel W. Förster2, Kirstin Henneberger1, Matthias Meyer3, Birgit Nickel3, Doris Nagel4, Rasmus Worsøe Havmøller5, Gennady F. Baryshnikov6, Ulrich Joger7, Wilfried Rosendahl8 and Michael Hofreiter1 Abstract Background: Resolving the historical biogeography of the leopard (Panthera pardus) is a complex issue, because patterns inferred from fossils and from molecular data lack congruence. Fossil evidence supports an African origin, and suggests that leopards were already present in Eurasia during the Early Pleistocene. Analysis of DNA sequences however, suggests a more recent, Middle Pleistocene shared ancestry of Asian and African leopards. These contrasting patterns led researchers to propose a two-stage hypothesis of leopard dispersal out of Africa: an initial Early Pleistocene colonisation of Asia and a subsequent replacement by a second colonisation wave during the Middle Pleistocene. The status of Late Pleistocene European leopards within this scenario is unclear: were these populations remnants of the first dispersal, or do the last surviving European leopards share more recent ancestry with their African counterparts? Results: In this study, we generate and analyse mitogenome sequences from historical samples that span the entire modern leopard distribution, as well as from Late Pleistocene remains. We find a deep bifurcation between African and Eurasian mitochondrial lineages (~ 710 Ka), with the European ancient samples as sister to all Asian lineages (~ 483 Ka). The modern and historical mainland Asian lineages share a relatively recent common ancestor (~ 122 Ka), and we find one Javan sample nested within these. -
July 2018 Vol.6 No.1 Journal of Indonesian Natural History Editors Dr
Journal of Indonesian Natural History July 2018 Vol.6 No.1 Journal of Indonesian Natural History Editors Dr. Wilson Novarino Dr. Carl Traeholt Associate Professor for Biology Programme Director, Southeast Asia Department of Biology Research and Conservation Division Andalas University, Indonesia Copenhagen Zoo, Denmark Email: [email protected] Email: [email protected] Editorial board Dr. Ardinis Arbain Dr. Ramadhanil Pitopang University of Andalas, Indonesia Tadulako University, Indonesia Indra Arinal Dr. Lilik Budi Prasetyo National Park Management, Department of Forestry Indonesia Bogor Institute of Agriculture, Indonesia Dr. Ahimsa Campos-Arceiz Dr. Dewi Malia Prawiradilaga Nottingham University Malaysia Campus, Malaysia Indonesia Institute of Science, Indonesia Dr. Mads Frost Bertelsen Dr. Rizaldi Research and Conservation Division, Copenhagen Zoo, Denmark University of Andalas, Indonesia Dr. Susan Cheyne Dr. Dewi Imelda Roesma Oxford University, Wildlife Research Unit, United Kingdom University of Andalas, Indonesia Bjorn Dahlen Dr. Jeffrine Rovie Ryan Green Harvest Environmental Sdn. Bhd, Malaysia Wildlife Forensics Lab, Dept. of Wildlife and National Parks, Malaysia Dr. Niel Furey Boyd Simpson Centre for Biodiversity Conservation, Royal University of Phnom Penh, Cambodia Research and Conservation Division, Copenhagen Zoo, Denmark Dr. Benoit Goossens Robert B. Stuebing Cardiff University, United Kingdom Herpetology and Conservation Biology, Indonesia Dr. Djoko Iskandar Dr. Sunarto Bandung Institute of Technology, Indonesia WWF-Indonesia -
Panthera Pardus) Range Countries
Profiles for Leopard (Panthera pardus) Range Countries Supplemental Document 1 to Jacobson et al. 2016 Profiles for Leopard Range Countries TABLE OF CONTENTS African Leopard (Panthera pardus pardus)...................................................... 4 North Africa .................................................................................................. 5 West Africa ................................................................................................... 6 Central Africa ............................................................................................. 15 East Africa .................................................................................................. 20 Southern Africa ........................................................................................... 26 Arabian Leopard (P. p. nimr) ......................................................................... 36 Persian Leopard (P. p. saxicolor) ................................................................... 42 Indian Leopard (P. p. fusca) ........................................................................... 53 Sri Lankan Leopard (P. p. kotiya) ................................................................... 58 Indochinese Leopard (P. p. delacouri) .......................................................... 60 North Chinese Leopard (P. p. japonensis) ..................................................... 65 Amur Leopard (P. p. orientalis) ..................................................................... 67 Javan Leopard -
Javan Leopard PHVA Provisional Report May2020.Pdf
Conservation Planning Workshops for the Javan Leopard (Panthera pardus melasCon) Provisional Report Workshop organizers: IUCN Conservation Planning Specialist Group; Taman Safari Indonesia Institutional support provided by: Copenhagen Zoo, Indonesian Ministry of Forestry, Taman Safari Indonesia, Tierpark Berlin Cover photo: Javan leopard, Taman Nasional Baluran, courtesy of Copenhagen Zoo IUCN encourages meetings, workshops and other fora for the consideration and analysis of issues related to conservation, and believes that reports of these meetings are most useful when broadly disseminated. The opinions and views expressed by the authors may not necessarily reflect the formal policies of IUCN, its Commissions, its Secretariat or its members. The designation of geographical entities in this book, and the presentation of the material, do not imply the expression of any opinion whatsoever on the part of IUCN concerning the legal status of any country, territory, or area, or of its authorities, or concerning the delimitation of its frontiers or boundaries. © Copyright CPSG 2020 Traylor-Holzer, K., B. Holst, K. Leus and K. Ferraz (eds.). 2020. Conservation Planning Workshops for the Javan Leopard (Panthera pardus melas) Provisional Report. IUCN SSC Conservation Planning Specialist Group, Apple Valley, MN. A PDF of this document can be downloaded at: www.cpsg.org. Conservation Planning Workshops for the Javan Leopard (Panthera pardus melas) Jakarta, Indonesia Species Distribution Modeling and Population Viability Analysis Workshop 28 – 29 -
Historical Biogeography of the Leopard (Panthera Pardus) and Its Extinct Eurasian Populations
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Copenhagen University Research Information System Historical biogeography of the leopard (Panthera pardus) and its extinct Eurasian populations Paijmans, Johanna L. A.; Barlow, Axel; Förster, Daniel W.; Henneberger, Kirstin; Meyer, Matthias; Nickel, Birgit; Nagel, Doris; Worsøe Havmøller, Rasmus; Baryshnikov, Gennady F.; Joger, Ulrich; Rosendahl, Wilfried; Hofreiter, Michael Published in: BMC Evolutionary Biology DOI: 10.1186/s12862-018-1268-0 Publication date: 2018 Document version Publisher's PDF, also known as Version of record Document license: CC BY Citation for published version (APA): Paijmans, J. L. A., Barlow, A., Förster, D. W., Henneberger, K., Meyer, M., Nickel, B., ... Hofreiter, M. (2018). Historical biogeography of the leopard (Panthera pardus) and its extinct Eurasian populations. BMC Evolutionary Biology, 18(1). https://doi.org/10.1186/s12862-018-1268-0 Download date: 09. Apr. 2020 Paijmans et al. BMC Evolutionary Biology (2018) 18:156 https://doi.org/10.1186/s12862-018-1268-0 RESEARCH ARTICLE Open Access Historical biogeography of the leopard (Panthera pardus) and its extinct Eurasian populations Johanna L. A. Paijmans1* , Axel Barlow1, Daniel W. Förster2, Kirstin Henneberger1, Matthias Meyer3, Birgit Nickel3, Doris Nagel4, Rasmus Worsøe Havmøller5, Gennady F. Baryshnikov6, Ulrich Joger7, Wilfried Rosendahl8 and Michael Hofreiter1 Abstract Background: Resolving the historical biogeography of the leopard (Panthera pardus) is a complex issue, because patterns inferred from fossils and from molecular data lack congruence. Fossil evidence supports an African origin, and suggests that leopards were already present in Eurasia during the Early Pleistocene. Analysis of DNA sequences however, suggests a more recent, Middle Pleistocene shared ancestry of Asian and African leopards. -
Identifying Drivers of Mammalian Evolution
Final report Gradual environmental change versus single catastrophe - Identifying drivers of mammalian evolution Leibniz-Institute: Leibniz Institute for Zoo and Wildlife Research Reference number: SAW-2013-IZW-2 Project period: 01.04.2011- 31.03.2016 (cost-neutrally extended to 31.12.2016) Contact partner: Prof. Dr. Jörns Fickel List of contents page Aims 1 Course of work 1 Development and establishment of methods 1 Deviations from the planned project 1 Results 2 Modules 1 & 2: Analysis of mtDNA haplotypes 2 Modules 3 & 4: Reconstruction of palaeo-climatic conditions 5 Module 5: Analysis of stable isotopes 6 Module 6: Ecological niche modelling 7 Modules 7 & 8: Dynamic modelling of future distributions 8 Economic impact/applications 9 Contribution by cooperation partners 9 Newly established cooperations 9 Theses (PhD, Master, term paper) 10 List of publications generated within the project 10 Peer-reviewed, already published 10 Submissions/resubmissions: 11 in preparation: 12 Book chapter: 12 Presentations/ talks at conferences 12 Posters: 13 Immediate impact of publications 13 Measures for safe storage and to secure access to data generated within the project 13 List of selected news clips and press coverage 14 Acknowledgements 14 Executive summary (English) The diversity of life is not evenly distributed across the planet. However, the mechanisms generating the (often complex) patterns of distribution of genetic diversity and species are still poorly understood. A way to close this gap is to investigate how environmental changes have impacted the distribution of genetic diversity and species in the past and continue to do so at present. A few areas, so-called biodiversity hotspots, harbor the majority of all species, leading to the question: What are the drivers shaping such high biodiversity, particularly in tropical rainforests? The project was set out in a biodiversity hotspot: the Sunda Shelf in Southeast Asia (SE Asia) and the bordering continental mainland. -
Cats on the 2009 Red List of Threatened Species
ISSN 1027-2992 CATnewsN° 51 | AUTUMN 2009 01 IUCNThe WorldCATnews Conservation 51Union Autumn 2009 news from around the world KRISTIN NOWELL1 Cats on the 2009 Red List of Threatened Species The IUCN Red List is the most authoritative lists participating in the assessment pro- global index to biodiversity status and is the cess. Distribution maps were updated and flagship product of the IUCN Species Survi- for the first time are being included on the val Commission and its supporting partners. Red List website (www.iucnredlist.org). Tex- As part of a recent multi-year effort to re- tual species accounts were also completely assess all mammalian species, the family re-written. A number of subspecies have Felidae was comprehensively re-evaluated been included, although a comprehensive in 2007-2008. A workshop was held at the evaluation was not possible (Nowell et al Oxford Felid Biology and Conservation Con- 2007). The 2008 Red List was launched at The fishing cat is one of the two species ference (Nowell et al. 2007), and follow-up IUCN’s World Conservation Congress in Bar- that had to be uplisted to Endangered by email with others led to over 70 specia- celona, Spain, and since then small changes (Photo A. Sliwa). Table 1. Felid species on the 2009 Red List. CATEGORY Common name Scientific name Criteria CRITICALLY ENDANGERED (CR) Iberian lynx Lynx pardinus C2a(i) ENDANGERED (EN) Andean cat Leopardus jacobita C2a(i) Tiger Panthera tigris A2bcd, A4bcd, C1, C2a(i) Snow leopard Panthera uncia C1 Borneo bay cat Pardofelis badia C1 Flat-headed -
Javan Leopard Sighting Raises Hopes for Rare Big Cat 9 February 2017
Javan leopard sighting raises hopes for rare big cat 9 February 2017 sanctuary has been successfully restored," said environment ministry spokesman Djati Witjaksono Hadi. The Javan leopard was previously believed to have died out in Cikepuh in the early 2000s due to rampant illegal logging that has devastated the area's forests, the big cat's natural habitat. Environmental group Conservation International estimated in 2015 there were only around 500 Javan leopards left in the wild, most in forests in western Java. Leopards are the smallest members of the big cat A critically endangered Javan leopard photographed on family, and can grow to around six feet (1.8 metres) October 24, 2012 by a camera trap installed in the forest in length. Different leopard subspecies are found of Mount Halimun-Salak National Park located in across the world, from Africa to India and Russia. Indonesia's western Java island © 2017 AFP Four Javan leopards have been spotted in an Indonesian national park where they were previously thought to have died out, raising hopes for the future of the rare big cat. The leopards were filmed in Cikepuh wildlife sanctuary on Java island by hidden cameras installed after reports the creatures' dung and footprints had been spotted in the area, the environment ministry said Thursday. Several sets of cameras scanned the area for 28 days in July and August, and filmed three leopards with yellow fur and black spots, and one that was entirely black. Another eight leopards were believed to be roaming the sanctuary, the ministry said, basing their estimate on studies of the animals' footprints and scratches found on trees.