Predator-Induced Plasticity in Egg Capsule Deposition in the Mudsnail, Tritia Obsoleta
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DEEP SEA LEBANON RESULTS of the 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project
DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project March 2018 DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project Citation: Aguilar, R., García, S., Perry, A.L., Alvarez, H., Blanco, J., Bitar, G. 2018. 2016 Deep-sea Lebanon Expedition: Exploring Submarine Canyons. Oceana, Madrid. 94 p. DOI: 10.31230/osf.io/34cb9 Based on an official request from Lebanon’s Ministry of Environment back in 2013, Oceana has planned and carried out an expedition to survey Lebanese deep-sea canyons and escarpments. Cover: Cerianthus membranaceus © OCEANA All photos are © OCEANA Index 06 Introduction 11 Methods 16 Results 44 Areas 12 Rov surveys 16 Habitat types 44 Tarablus/Batroun 14 Infaunal surveys 16 Coralligenous habitat 44 Jounieh 14 Oceanographic and rhodolith/maërl 45 St. George beds measurements 46 Beirut 19 Sandy bottoms 15 Data analyses 46 Sayniq 15 Collaborations 20 Sandy-muddy bottoms 20 Rocky bottoms 22 Canyon heads 22 Bathyal muds 24 Species 27 Fishes 29 Crustaceans 30 Echinoderms 31 Cnidarians 36 Sponges 38 Molluscs 40 Bryozoans 40 Brachiopods 42 Tunicates 42 Annelids 42 Foraminifera 42 Algae | Deep sea Lebanon OCEANA 47 Human 50 Discussion and 68 Annex 1 85 Annex 2 impacts conclusions 68 Table A1. List of 85 Methodology for 47 Marine litter 51 Main expedition species identified assesing relative 49 Fisheries findings 84 Table A2. List conservation interest of 49 Other observations 52 Key community of threatened types and their species identified survey areas ecological importanc 84 Figure A1. -
Version of the Manuscript
Accepted Manuscript Antarctic and sub-Antarctic Nacella limpets reveal novel evolutionary charac- teristics of mitochondrial genomes in Patellogastropoda Juan D. Gaitán-Espitia, Claudio A. González-Wevar, Elie Poulin, Leyla Cardenas PII: S1055-7903(17)30583-3 DOI: https://doi.org/10.1016/j.ympev.2018.10.036 Reference: YMPEV 6324 To appear in: Molecular Phylogenetics and Evolution Received Date: 15 August 2017 Revised Date: 23 July 2018 Accepted Date: 30 October 2018 Please cite this article as: Gaitán-Espitia, J.D., González-Wevar, C.A., Poulin, E., Cardenas, L., Antarctic and sub- Antarctic Nacella limpets reveal novel evolutionary characteristics of mitochondrial genomes in Patellogastropoda, Molecular Phylogenetics and Evolution (2018), doi: https://doi.org/10.1016/j.ympev.2018.10.036 This is a PDF file of an unedited manuscript that has been accepted for publication. As a service to our customers we are providing this early version of the manuscript. The manuscript will undergo copyediting, typesetting, and review of the resulting proof before it is published in its final form. Please note that during the production process errors may be discovered which could affect the content, and all legal disclaimers that apply to the journal pertain. Version: 23-07-2018 SHORT COMMUNICATION Running head: mitogenomes Nacella limpets Antarctic and sub-Antarctic Nacella limpets reveal novel evolutionary characteristics of mitochondrial genomes in Patellogastropoda Juan D. Gaitán-Espitia1,2,3*; Claudio A. González-Wevar4,5; Elie Poulin5 & Leyla Cardenas3 1 The Swire Institute of Marine Science and School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China 2 CSIRO Oceans and Atmosphere, GPO Box 1538, Hobart 7001, TAS, Australia. -
Review of the Nassarius Pauperus
ZOBODAT - www.zobodat.at Zoologisch-Botanische Datenbank/Zoological-Botanical Database Digitale Literatur/Digital Literature Zeitschrift/Journal: European Journal of Taxonomy Jahr/Year: 2017 Band/Volume: 0275 Autor(en)/Author(s): Galindo Lee Ann, Kool Hugo H., Dekker Henk Artikel/Article: Review of the Nassarius pauperus (Gould, 1850) complex (Nassariidae): Part 3, reinstatement of the genus Reticunassa, with the description of six new species 1-43 European Journal of Taxonomy 275: 1–43 ISSN 2118-9773 http://dx.doi.org/10.5852/ejt.2017.275 www.europeanjournaloftaxonomy.eu 2017 · Galindo L.A. et al. This work is licensed under a Creative Commons Attribution 3.0 License. DNA Library of Life, research article urn:lsid:zoobank.org:pub:FC663FAD-BCCB-4423-8952-87E93B14DEEA Review of the Nassarius pauperus (Gould, 1850) complex (Nassariidae): Part 3, reinstatement of the genus Reticunassa, with the description of six new species Lee Ann GALINDO 1*, Hugo H. KOOL 2 & Henk DEKKER 3 1 Muséum national d’Histoire naturelle, Département Systématique et Evolution, ISyEB Institut (UMR 7205 CNRS/UPMC/MNHN/EPHE), 43, Rue Cuvier, 75231 Paris, France. 2,3 Associate Mollusca Collection, Naturalis Biodiversity Center, P.O. Box 9517, 2300 RA Leiden, the Netherlands. * Corresponding author: [email protected] 2 Email: [email protected] 3 Email: [email protected] 1 urn:lsid:zoobank.org:author:B84DC387-F1A5-4FE4-80F2-5C93E41CEC15 2 urn:lsid:zoobank.org:author:5E718E5A-85C8-404C-84DC-6E53FD1D61D6 3 urn:lsid:zoobank.org:author:DA6A1E69-F70A-42CC-A702-FE0EC80D77FA Abstract. In this review (third part), several species within the Nassarius pauperus complex from the eastern Indian Ocean and western Pacifi c are treated, including a revised concept of Nassa paupera Gould, 1850, type species of the genus Reticunassa Iredale, 1936. -
The Upper Miocene Gastropods of Northwestern France, 4. Neogastropoda
Cainozoic Research, 19(2), pp. 135-215, December 2019 135 The upper Miocene gastropods of northwestern France, 4. Neogastropoda Bernard M. Landau1,4, Luc Ceulemans2 & Frank Van Dingenen3 1 Naturalis Biodiversity Center, P.O. Box 9517, 2300 RA Leiden, The Netherlands; Instituto Dom Luiz da Universidade de Lisboa, Campo Grande, 1749-016 Lisboa, Portugal; and International Health Centres, Av. Infante de Henrique 7, Areias São João, P-8200 Albufeira, Portugal; email: [email protected] 2 Avenue Général Naessens de Loncin 1, B-1330 Rixensart, Belgium; email: [email protected] 3 Cambeenboslaan A 11, B-2960 Brecht, Belgium; email: [email protected] 4 Corresponding author Received: 2 May 2019, revised version accepted 28 September 2019 In this paper we review the Neogastropoda of the Tortonian upper Miocene (Assemblage I of Van Dingenen et al., 2015) of northwestern France. Sixty-seven species are recorded, of which 18 are new: Gibberula ligeriana nov. sp., Euthria presselierensis nov. sp., Mitrella clava nov. sp., Mitrella ligeriana nov. sp., Mitrella miopicta nov. sp., Mitrella pseudoinedita nov. sp., Mitrella pseudoblonga nov. sp., Mitrella pseudoturgidula nov. sp., Sulcomitrella sceauxensis nov. sp., Tritia turtaudierei nov. sp., Engina brunettii nov. sp., Pisania redoniensis nov. sp., Pusia (Ebenomitra) brebioni nov. sp., Pusia (Ebenomitra) pseudoplicatula nov. sp., Pusia (Ebenomitra) renauleauensis nov. sp., Pusia (Ebenomitra) sublaevis nov. sp., Episcomitra s.l. silvae nov. sp., Pseudonebularia sceauxensis nov. sp. Fusus strigosus Millet, 1865 is a junior homonym of F. strigosus Lamarck, 1822, and is renamed Polygona substrigosa nom. nov. Nassa (Amycla) lambertiei Peyrot, 1925, is considered a new subjective junior synonym of Tritia pyrenaica (Fontannes, 1879). -
Benthic Infaunal Communities and Sediment Properties in Pile Fields Within the Hudson River Park Estuarine Sanctuary
Benthic Infaunal Communities and Sediment Properties in Pile Fields within the Hudson River Park Estuarine Sanctuary Final report to: New York-New Jersey Harbor Estuary Program Hudson River Foundation Gary L. Taghon Rosemarie F. Petrecca Charlotte M. Fuller Rutgers, the State University of New Jersey Department of Marine and Coastal Sciences New Brunswick, NJ 21 June 2018 Hudson Benthics Project Final report 7/11/2018 1 INTRODUCTION A core mission of the NY-NJ Harbor & Estuary Program, along with the Hudson River Foundation, is to advance research to facilitate the restoration of more, and better quality, habitat. In urban estuaries such as the NY-NJ Harbor Estuary, restoring shorelines and shallow waters to their natural or pre-industrial state is not an option in most cases because human activities have extensively modified the shorelines since the time of European contact (Squires 1992). Therefore, organizations that work to restore habitat need to dig deeper to find out what creates the most desirable habitat for estuarine wildlife. Pile fields are legacy piers that have lost their surfaces and exist as wooden piles sticking out of the sediment. Pile fields have been extolled as good habitat for fish. It is even written into the Hudson River Park Estuarine Sanctuary Management Plan that the Hudson River pile fields must be maintained for their habitat value. There is no definitive answer, however, as to why and how fish and other estuarine organisms use the pile fields. The project and results described in this report address a small portion of that larger question by assessing if the structure of the benthic community may have some bearing on how the pile fields are used as habitat. -
Effects of Clam Aquaculture on Nektonic and Benthic Assemblages in Two Shallow-Water Estuaries
W&M ScholarWorks VIMS Articles Virginia Institute of Marine Science 2016 Effects Of Clam Aquaculture On Nektonic And Benthic Assemblages In Two Shallow-Water Estuaries Mark Luckenbach Virginia Institute of Marine Science JN Kraeuter D Bushek Follow this and additional works at: https://scholarworks.wm.edu/vimsarticles Part of the Marine Biology Commons Recommended Citation Luckenbach, Mark; Kraeuter, JN; and Bushek, D, Effects Of Clam Aquaculture On Nektonic And Benthic Assemblages In Two Shallow-Water Estuaries (2016). Journal Of Shellfish Research, 35(4), 757-775. 10.2983/035.035.0405 This Article is brought to you for free and open access by the Virginia Institute of Marine Science at W&M ScholarWorks. It has been accepted for inclusion in VIMS Articles by an authorized administrator of W&M ScholarWorks. For more information, please contact [email protected]. Journal of Shellfish Research, Vol. 35, No. 4, 757–775, 2016. EFFECTS OF CLAM AQUACULTURE ON NEKTONIC AND BENTHIC ASSEMBLAGES IN TWO SHALLOW-WATER ESTUARIES MARK W. LUCKENBACH,1* JOHN N. KRAEUTER2,3 AND DAVID BUSHEK2 1Virginia Institute of Marine Science, College of William Mary, 1208 Greate Rd., Gloucester Point, VA 23062; 2Haskin Shellfish Research Laboratory, Rutgers University, 6959 Miller Ave., Port Norris, NJ 08349; 3Marine Science Center, University of New England, 1-43 Hills Beach Rd., Biddeford, ME 04005 ABSTRACT Aquaculture of the northern quahog (¼hard clam) Mercenaria mercenaria (Linnaeus, 1758) is widespread in shallow waters of the United States from Cape Cod to the eastern Gulf of Mexico. Grow-out practices generally involve bottom planting and the use of predator exclusion mesh. -
Caenogastropoda
13 Caenogastropoda Winston F. Ponder, Donald J. Colgan, John M. Healy, Alexander Nützel, Luiz R. L. Simone, and Ellen E. Strong Caenogastropods comprise about 60% of living Many caenogastropods are well-known gastropod species and include a large number marine snails and include the Littorinidae (peri- of ecologically and commercially important winkles), Cypraeidae (cowries), Cerithiidae (creep- marine families. They have undergone an ers), Calyptraeidae (slipper limpets), Tonnidae extraordinary adaptive radiation, resulting in (tuns), Cassidae (helmet shells), Ranellidae (tri- considerable morphological, ecological, physi- tons), Strombidae (strombs), Naticidae (moon ological, and behavioral diversity. There is a snails), Muricidae (rock shells, oyster drills, etc.), wide array of often convergent shell morpholo- Volutidae (balers, etc.), Mitridae (miters), Buccin- gies (Figure 13.1), with the typically coiled shell idae (whelks), Terebridae (augers), and Conidae being tall-spired to globose or fl attened, with (cones). There are also well-known freshwater some uncoiled or limpet-like and others with families such as the Viviparidae, Thiaridae, and the shells reduced or, rarely, lost. There are Hydrobiidae and a few terrestrial groups, nota- also considerable modifi cations to the head- bly the Cyclophoroidea. foot and mantle through the group (Figure 13.2) Although there are no reliable estimates and major dietary specializations. It is our aim of named species, living caenogastropods are in this chapter to review the phylogeny of this one of the most diverse metazoan clades. Most group, with emphasis on the areas of expertise families are marine, and many (e.g., Strombidae, of the authors. Cypraeidae, Ovulidae, Cerithiopsidae, Triphori- The fi rst records of undisputed caenogastro- dae, Olividae, Mitridae, Costellariidae, Tereb- pods are from the middle and upper Paleozoic, ridae, Turridae, Conidae) have large numbers and there were signifi cant radiations during the of tropical taxa. -
Carcinus Maenas
Selection and Availability of Shellfish Prey for Invasive Green Crabs [Carcinus maenas (Linneaus, 1758)] in a Partially Restored Back-Barrier Salt Marsh Lagoon on Cape Cod, Massachusetts Author(s): Heather Conkerton, Rachel Thiet, Megan Tyrrell, Kelly Medeiros and Stephen Smith Source: Journal of Shellfish Research, 36(1):189-199. Published By: National Shellfisheries Association DOI: http://dx.doi.org/10.2983/035.036.0120 URL: http://www.bioone.org/doi/full/10.2983/035.036.0120 BioOne (www.bioone.org) is a nonprofit, online aggregation of core research in the biological, ecological, and environmental sciences. BioOne provides a sustainable online platform for over 170 journals and books published by nonprofit societies, associations, museums, institutions, and presses. Your use of this PDF, the BioOne Web site, and all posted and associated content indicates your acceptance of BioOne’s Terms of Use, available at www.bioone.org/page/terms_of_use. Usage of BioOne content is strictly limited to personal, educational, and non-commercial use. Commercial inquiries or rights and permissions requests should be directed to the individual publisher as copyright holder. BioOne sees sustainable scholarly publishing as an inherently collaborative enterprise connecting authors, nonprofit publishers, academic institutions, research libraries, and research funders in the common goal of maximizing access to critical research. Journal of Shellfish Research, Vol. 36, No. 1, 189–199, 2017. SELECTION AND AVAILABILITY OF SHELLFISH PREY FOR INVASIVE GREEN CRABS -
Genes with Spiralian-Specific Protein Motifs Are Expressed In
ARTICLE https://doi.org/10.1038/s41467-020-17780-7 OPEN Genes with spiralian-specific protein motifs are expressed in spiralian ciliary bands Longjun Wu1,6, Laurel S. Hiebert 2,7, Marleen Klann3,8, Yale Passamaneck3,4, Benjamin R. Bastin5, Stephan Q. Schneider 5,9, Mark Q. Martindale 3,4, Elaine C. Seaver3, Svetlana A. Maslakova2 & ✉ J. David Lambert 1 Spiralia is a large, ancient and diverse clade of animals, with a conserved early developmental 1234567890():,; program but diverse larval and adult morphologies. One trait shared by many spiralians is the presence of ciliary bands used for locomotion and feeding. To learn more about spiralian- specific traits we have examined the expression of 20 genes with protein motifs that are strongly conserved within the Spiralia, but not detectable outside of it. Here, we show that two of these are specifically expressed in the main ciliary band of the mollusc Tritia (also known as Ilyanassa). Their expression patterns in representative species from five more spiralian phyla—the annelids, nemerteans, phoronids, brachiopods and rotifers—show that at least one of these, lophotrochin, has a conserved and specific role in particular ciliated structures, most consistently in ciliary bands. These results highlight the potential importance of lineage-specific genes or protein motifs for understanding traits shared across ancient lineages. 1 Department of Biology, University of Rochester, Rochester, NY 14627, USA. 2 Oregon Institute of Marine Biology, University of Oregon, Charleston, OR 97420, USA. 3 Whitney Laboratory for Marine Bioscience, University of Florida, 9505 Ocean Shore Blvd., St. Augustine, FL 32080, USA. 4 Kewalo Marine Laboratory, PBRC, University of Hawaii, 41 Ahui Street, Honolulu, HI 96813, USA. -
West Falmouth Harbor 2019
Massachusetts Estuaries Project Benthic Monitoring Report: West Falmouth Harbor 2019 Prepared for: Massachusetts Department of Environmental Protection June 2020 BENTHIC MONITORING REPORT: WEST FALMOUTH HARBOR 2019 for MassDEP Massachusetts Estuaries Project Benthic Monitoring Submitted to Massachusetts Department of Environmental Protection Massachusetts Estuaries Project 8 New Bond Street Worcester, MA 01606 Prepared by Mindy Sweeny Deborah A. Rutecki Submitted by Normandeau Associates, Inc. 141 Falmouth Heights Rd. Falmouth, MA 02540 June 2020 ii MASSACHUSETTS ESTUARIEs PROJECT – West Falmouth Benthic Report June 2020 Table of Contents Page 1 INTRODUCTION ................................................................................ 1 2 METHODS ....................................................................................... 4 2.1 FIELD METHODS .............................................................................. 4 2.2 LABORATORY METHODS ...................................................................... 6 2.3 DATA ANALYSIS .............................................................................. 7 3 RESULTS AND DISCUSSION .................................................................. 8 3.1 WATER QUALITY ........................................................................... 8 3.2 UNDERWATER DIGITAL IMAGES............................................................. 10 3.3 SEDIMENT COMPOSITION ................................................................... 17 Grain Size Analysis .................................................................... -
Gangliogenesis in the Prosobranch Gastropod Ilyanassa Obsoleta By
Gangliogenesis in the Prosobranch Gastropod Ilyanassa obsoleta By: Miao-Fang Lin and Esther M. Leise Lin, M.-F. and Leise, E.M. (1996) Gangliogenesis in the Prosobranch Gastropod Ilyanassa obsoleta. Journal of Comparative Neurology 374(2):180-193. Made available courtesy of Wiley-Blackwell: The definitive version is available at http://www3.interscience.wiley.com ***Reprinted with permission. No further reproduction is authorized without written permission from Wiley-Blackwell. This version of the document is not the version of record. Figures and/or pictures may be missing from this format of the document.*** Abstract: We determined that the larval nervous system of Ilyanassa obsoleta contains paired cerebral, pleural, pedal, buccal, and intestinal ganglia and unpaired apical, osphradial, and visceral ganglia. We used a modified form of NADPH diaphorase histochemistry to compare the neuroanatomy of precompetent (including specimens 6, 8, and 12 days after hatching), competent, and metamorphosing larvae with postmetamorphic juveniles. This method highlighted ganglionic neuropils and allowed us to identify individual ganglia at various stages of development, thereby laying a foundation for concurrent histochemical studies. The first ganglia to form were the unpaired apical and osphradial ganglia and the paired cerebral and pedal ganglia. In larvae 6 days after hatching, the neuropil had already appeared in the apical and osphradial ganglia. Neuropil began to be apparent in the cerebral and pedal ganglia 2 days later. At that time, the pleural and buccal ganglia were identifiable and adjacent to the posterior edge of the cerebral ganglia. The ganglia of the visceral loop were concurrently recognizable, although the supraintestinal ganglion developed slightly earlier than the subintestinal and visceral ganglia. -
Complete Mitochondrial Genomes of Two Toxin-Accumulated Nassariids (Neogastropoda: Nassariidae: Nassarius) and Their Implication for Phylogeny
International Journal of Molecular Sciences Article Complete Mitochondrial Genomes of Two Toxin-Accumulated Nassariids (Neogastropoda: Nassariidae: Nassarius) and Their Implication for Phylogeny Yi Yang 1, Hongyue Liu 1, Lu Qi 1, Lingfeng Kong 1 and Qi Li 1,2,* 1 Key Laboratory of Mariculture, Ministry of Education, Ocean University of China, Qingdao 266003, China; [email protected] (Y.Y.); [email protected] (H.L.); [email protected] (L.Q.); [email protected] (L.K.) 2 Laboratory for Marine Fisheries Science and Food Production Processes, Qingdao National Laboratory for Marine Science and Technology, 1 Wenhai Road, Aoshanwei Town, Qingdao 266237, China * Correspondence: [email protected]; Tel.: +86-532-8203-2773 Received: 30 March 2020; Accepted: 12 May 2020; Published: 17 May 2020 Abstract: The Indo-Pacific nassariids (genus Nassarius) possesses the highest diversity within the family Nassariidae. However, the previous shell or radula-based classification of Nassarius is quite confusing due to the homoplasy of certain morphological characteristics. The toxin accumulators Nassarius glans and Nassarius siquijorensis are widely distributed in the subtidal regions of the Indo-Pacific Ocean. In spite of their biological significance, the phylogenetic positions of N. glans and N. siquijorensis are still undetermined. In the present study, the complete mitochondrial genomes of N. glans and N. siquijorensis were sequenced. The present mitochondrial genomes were 15,296 and 15,337 bp in length, respectively, showing negative AT skews and positive GC skews as well as a bias of AT rich on the heavy strand. They contained 13 protein coding genes, 22 transfer RNA genes, two ribosomal RNA genes, and several noncoding regions, and their gene order was identical to most caenogastropods.