Waves Cue Distinct Behaviors and Differentiate Transport of Congeneric
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Sandbridge Beach FONSI
FINDING OF NO SIGNIFICANT IMPACT Issuance of a Negotiated Agreement for Use of Outer Continental Shelf Sand from Sandbridge Shoal in the Sandbridge Beach Erosion Control and Hurricane Protection Project Virginia Beach, Virginia Pursuant to the National Environmental Policy Act (NEPA), Council on Environmental Quality regulations implementing NEPA (40 CFR 1500-1508) and Department of the Interior (DOI) regulations implementing NEPA (43 CFR 46), the Bureau of Ocean Energy Management (BOEM) prepared an environmental assessment (EA) to determine whether the issuance of a negotiated agreement for the use of Outer Continental Shelf (OCS) sand from Sandbridge Shoal Borrow Areas A and B for the Sandbridge Beach Erosion Control and Hurricane Protection Project near Virginia Beach, VA would have a significant effect on the human environment and whether an environmental impact statement (EIS) should be prepared. Several NEPA documents evaluating impacts of the project have been previously prepared by both the US Army Corps of Engineers (USACE) and BOEM. The USACE described the affected environment, evaluated potential environmental impacts (initial construction and nourishment events), and considered alternatives to the proposed action in a 2009 EA. This EA was subsequently updated and adopted by BOEM in 2012 in association with the most recent 2013 Sandbridge nourishment effort (BOEM 2012). Prior to this, BOEM (previously Minerals Management Service [MMS]) was a cooperating agency on several EAs for previous projects (MMS 1997; MMS 2001; MMS 2006). This current EA, prepared by BOEM, supplements and summarizes the aforementioned 2012 analysis. BOEM has reviewed all prior analyses, supplemented additional information as needed, and determined that the potential impacts of the current proposed action have been adequately addressed. -
The Sense of Hearing in the Pacific Oyster, Magallana Gigas
RESEARCH ARTICLE The sense of hearing in the Pacific oyster, Magallana gigas Mohcine Charifi1,2,3, Mohamedou Sow1,2, Pierre Ciret1,2, Soumaya Benomar3, Jean- Charles Massabuau1,2* 1 University of Bordeaux, EPOC, UMR 5805, Arcachon, France, 2 CNRS, EPOC, UMR 5805, Talence, France, 3 Unit of Research on Biological Rhythms, Neuroscience and Environment, Faculty of Science, Mohammed V-Agdal University, Rabat, Morocco * [email protected] a1111111111 a1111111111 a1111111111 a1111111111 Abstract a1111111111 There is an increasing concern that anthropogenic noise could have a significant impact on the marine environment, but there is still insufficient data for most invertebrates. What do they perceive? We investigated this question in oysters Magallana gigas (Crassostrea gigas) using pure tone exposures, accelerometer fixed on the oyster shell and hydrophone in the OPEN ACCESS water column. Groups of 16 oysters were exposed to quantifiable waterborne sinusoidal Citation: Charifi M, Sow M, Ciret P, Benomar S, sounds in the range of 10 Hz to 20 kHz at various acoustic energies. The experiment was con- Massabuau J-C (2017) The sense of hearing in the ducted in running seawater using an experimental flume equipped with suspended loud- Pacific oyster, Magallana gigas. PLoS ONE 12(10): e0185353. https://doi.org/10.1371/journal. speakers. The sensitivity of the oysters was measured by recording their valve movements pone.0185353 by high-frequency noninvasive valvometry. The tests were 3 min tone exposures including a Editor: Jose A. FernaÂndez Robledo, Bigelow 70 sec fade-in period. Three endpoints were analysed: the ratio of responding individuals in Laboratory for Ocean Sciences, UNITED STATES the group, the resulting changes of valve opening amplitude and the response latency. -
Initial Survey of Plum Island's Marine Habitats
Initial Survey of Plum Island’s Marine Habitats New York Natural Heritage Program Initial Survey of Plum Island’s Marine Habitats Emily S. Runnells Matthew D. Schlesinger Gregory J. Edinger New York Natural Heritage Program and Steven C. Resler Dan Marelli InnerSpace Scientific Diving A report to Save the Sound April 2020 Please cite this report as follows: New York Natural Heritage Program and InnerSpace Scientific Diving. 2020. Initial survey of Plum Island’s marine habitats. Report to Save the Sound. Available from New York Natural Heritage Program, Albany, NY. Available at www.nynhp.org/plumisland. Cover photos (left to right, top to bottom): Bryozoans and sponges; lion’s mane jellyfish; flat-clawed hermit crab; diver recording information from inside quadrat; bryozoans, sponges and northern star corals. All photos herein by the authors. Contents Introduction ........................................................................................................................................................ 1 Methods ............................................................................................................................................................... 1 Results .................................................................................................................................................................. 6 Discussion and Next Steps ............................................................................................................................... 9 Acknowledgments........................................................................................................................................... -
Version of the Manuscript
Accepted Manuscript Antarctic and sub-Antarctic Nacella limpets reveal novel evolutionary charac- teristics of mitochondrial genomes in Patellogastropoda Juan D. Gaitán-Espitia, Claudio A. González-Wevar, Elie Poulin, Leyla Cardenas PII: S1055-7903(17)30583-3 DOI: https://doi.org/10.1016/j.ympev.2018.10.036 Reference: YMPEV 6324 To appear in: Molecular Phylogenetics and Evolution Received Date: 15 August 2017 Revised Date: 23 July 2018 Accepted Date: 30 October 2018 Please cite this article as: Gaitán-Espitia, J.D., González-Wevar, C.A., Poulin, E., Cardenas, L., Antarctic and sub- Antarctic Nacella limpets reveal novel evolutionary characteristics of mitochondrial genomes in Patellogastropoda, Molecular Phylogenetics and Evolution (2018), doi: https://doi.org/10.1016/j.ympev.2018.10.036 This is a PDF file of an unedited manuscript that has been accepted for publication. As a service to our customers we are providing this early version of the manuscript. The manuscript will undergo copyediting, typesetting, and review of the resulting proof before it is published in its final form. Please note that during the production process errors may be discovered which could affect the content, and all legal disclaimers that apply to the journal pertain. Version: 23-07-2018 SHORT COMMUNICATION Running head: mitogenomes Nacella limpets Antarctic and sub-Antarctic Nacella limpets reveal novel evolutionary characteristics of mitochondrial genomes in Patellogastropoda Juan D. Gaitán-Espitia1,2,3*; Claudio A. González-Wevar4,5; Elie Poulin5 & Leyla Cardenas3 1 The Swire Institute of Marine Science and School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China 2 CSIRO Oceans and Atmosphere, GPO Box 1538, Hobart 7001, TAS, Australia. -
Caenogastropoda
13 Caenogastropoda Winston F. Ponder, Donald J. Colgan, John M. Healy, Alexander Nützel, Luiz R. L. Simone, and Ellen E. Strong Caenogastropods comprise about 60% of living Many caenogastropods are well-known gastropod species and include a large number marine snails and include the Littorinidae (peri- of ecologically and commercially important winkles), Cypraeidae (cowries), Cerithiidae (creep- marine families. They have undergone an ers), Calyptraeidae (slipper limpets), Tonnidae extraordinary adaptive radiation, resulting in (tuns), Cassidae (helmet shells), Ranellidae (tri- considerable morphological, ecological, physi- tons), Strombidae (strombs), Naticidae (moon ological, and behavioral diversity. There is a snails), Muricidae (rock shells, oyster drills, etc.), wide array of often convergent shell morpholo- Volutidae (balers, etc.), Mitridae (miters), Buccin- gies (Figure 13.1), with the typically coiled shell idae (whelks), Terebridae (augers), and Conidae being tall-spired to globose or fl attened, with (cones). There are also well-known freshwater some uncoiled or limpet-like and others with families such as the Viviparidae, Thiaridae, and the shells reduced or, rarely, lost. There are Hydrobiidae and a few terrestrial groups, nota- also considerable modifi cations to the head- bly the Cyclophoroidea. foot and mantle through the group (Figure 13.2) Although there are no reliable estimates and major dietary specializations. It is our aim of named species, living caenogastropods are in this chapter to review the phylogeny of this one of the most diverse metazoan clades. Most group, with emphasis on the areas of expertise families are marine, and many (e.g., Strombidae, of the authors. Cypraeidae, Ovulidae, Cerithiopsidae, Triphori- The fi rst records of undisputed caenogastro- dae, Olividae, Mitridae, Costellariidae, Tereb- pods are from the middle and upper Paleozoic, ridae, Turridae, Conidae) have large numbers and there were signifi cant radiations during the of tropical taxa. -
Non-Collinear Hox Gene Expression in Bivalves and the Evolution
www.nature.com/scientificreports OPEN Non‑collinear Hox gene expression in bivalves and the evolution of morphological novelties in mollusks David A. Salamanca‑Díaz1, Andrew D. Calcino1, André L. de Oliveira2 & Andreas Wanninger 1* Hox genes are key developmental regulators that are involved in establishing morphological features during animal ontogeny. They are commonly expressed along the anterior–posterior axis in a staggered, or collinear, fashion. In mollusks, the repertoire of body plans is widely diverse and current data suggest their involvement during development of landmark morphological traits in Conchifera, one of the two major lineages that comprises those taxa that originated from a uni‑shelled ancestor (Monoplacophora, Gastropoda, Cephalopoda, Scaphopoda, Bivalvia). For most clades, and bivalves in particular, data on Hox gene expression throughout ontogeny are scarce. We thus investigated Hox expression during development of the quagga mussel, Dreissena rostriformis, to elucidate to which degree they might contribute to specifc phenotypic traits as in other conchiferans. The Hox/ParaHox complement of Mollusca typically comprises 14 genes, 13 of which are present in bivalve genomes including Dreissena. We describe here expression of 9 Hox genes and the ParaHox gene Xlox during Dreissena development. Hox expression in Dreissena is frst detected in the gastrula stage with widely overlapping expression domains of most genes. In the trochophore stage, Hox gene expression shifts towards more compact, largely mesodermal domains. Only few of these domains can be assigned to specifc developing morphological structures such as Hox1 in the shell feld and Xlox in the hindgut. We did not fnd traces of spatial or temporal staggered expression of Hox genes in Dreissena. -
The Published Mitogenome of Alectryonella Plicatula (Ostreinae)
bioRxiv preprint doi: https://doi.org/10.1101/2021.06.19.449104; this version posted June 20, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 Yet another mitochondrial genome of the Pacific cupped oyster: the published 2 mitogenome of Alectryonella plicatula (Ostreinae) is based on a misidentified 3 Magallana gigas (Crassostreinae) 4 Daniele Salvi1, @, Emanuele Berrilli1, Matteo Garzia1, Paolo Mariottini2 5 6 1 Department of Health, Life and Environmental Sciences, University of L’Aquila, Via Vetoio, 67100 Coppito, 7 L’Aquila, Italy. 8 2 Dipartimento di Scienze, Università Roma Tre, Viale G. Marconi 446, 00146 Rome, Italy 9 10 @: Corresponding author: Daniele Salvi, [email protected] 11 12 13 Abstract 14 The recently published mitochondrial genome of the fingerprint oyster Alectryonella plicatula 15 (Gmelin, 1791) with GenBank accession number MW143047 was resolved in an unexpected 16 phylogenetic position, as sister to the Pacific cupped oyster Magallana gigas (Thunberg, 1793) and 17 share with this species three typical gene duplications that represent robust synapomorphies of the 18 Magallana clade. In this study, we verified the identity of MW143047 using direct comparisons of 19 single gene sequences, DNA barcoding and phylogenetic analyses. BLAST searches using each of 20 the 12 protein coding genes and rRNA genes extracted from MW143047 as query retrieved M. 21 gigas as best hit with 100% sequence identity. MW143047 is nested within the clade formed by M. 22 gigas sequences, with virtually no difference between their terminal branch lengths, both in the 23 cox1 gene tree (based on 3639 sequences) and in the 16S gene tree (based on 1839 sequences), as 24 well as in the Maximum Likelihood mitogenomic tree based on concatenated sequence of 12 PCGs. -
Genes with Spiralian-Specific Protein Motifs Are Expressed In
ARTICLE https://doi.org/10.1038/s41467-020-17780-7 OPEN Genes with spiralian-specific protein motifs are expressed in spiralian ciliary bands Longjun Wu1,6, Laurel S. Hiebert 2,7, Marleen Klann3,8, Yale Passamaneck3,4, Benjamin R. Bastin5, Stephan Q. Schneider 5,9, Mark Q. Martindale 3,4, Elaine C. Seaver3, Svetlana A. Maslakova2 & ✉ J. David Lambert 1 Spiralia is a large, ancient and diverse clade of animals, with a conserved early developmental 1234567890():,; program but diverse larval and adult morphologies. One trait shared by many spiralians is the presence of ciliary bands used for locomotion and feeding. To learn more about spiralian- specific traits we have examined the expression of 20 genes with protein motifs that are strongly conserved within the Spiralia, but not detectable outside of it. Here, we show that two of these are specifically expressed in the main ciliary band of the mollusc Tritia (also known as Ilyanassa). Their expression patterns in representative species from five more spiralian phyla—the annelids, nemerteans, phoronids, brachiopods and rotifers—show that at least one of these, lophotrochin, has a conserved and specific role in particular ciliated structures, most consistently in ciliary bands. These results highlight the potential importance of lineage-specific genes or protein motifs for understanding traits shared across ancient lineages. 1 Department of Biology, University of Rochester, Rochester, NY 14627, USA. 2 Oregon Institute of Marine Biology, University of Oregon, Charleston, OR 97420, USA. 3 Whitney Laboratory for Marine Bioscience, University of Florida, 9505 Ocean Shore Blvd., St. Augustine, FL 32080, USA. 4 Kewalo Marine Laboratory, PBRC, University of Hawaii, 41 Ahui Street, Honolulu, HI 96813, USA. -
President's Message
2018 (1) President’s Message Greetings and Happy New Year from unfamiliar with us as a group. While on your travels to other Maine! The 110th Annual Meeting of meetings around the globe, spread the word about NSA and the National Shellfisheries Association encourage people to become members. Word of mouth is probably in Seattle, WA is rapidly approaching. the most effective means for our organization to flourish. If you This year’s meeting is shaping up to be are one of the first three people to recruit five new members, you one of our biggest yet and the schedule will receive a FREE REGISTRATION to our 2020 Annual it jam packed with great sessions Meeting. Just make sure to let our Secretariat, Linda Kallansrude, ranging from ‘Omics to HAB, and know who you recruited. from Climate Change to Disease. There will also be a few micro-workshops for those interested in diving deeper with It is never too early to look ahead to next year either. I, along with some hands-on practical examples in the world of Genomics, Sandy Shumway, are currently recruiting session organizers for Disease, and even the art of Gyotaku. We are set to close to Aquaculture 2019, our Triennial Meeting. The Triennial meetings 400 papers presented as well as some amazing plenary speakers can be intimidating for some that like the size of our annual to kick off each day (Peter Beninger, Donal Manahan, Suzanne meetings, but they should not be missed due to the great Williams, and Gary Wikfors). If you have not yet registered for opportunity to network with individuals within the industries we the 2018 Annual Meeting, you still have time. -
Evolutionary History of DNA Methylation Related Genes in Bivalvia: New Insights from Mytilus Galloprovincialis
fevo-09-698561 July 3, 2021 Time: 17:34 # 1 ORIGINAL RESEARCH published: 09 July 2021 doi: 10.3389/fevo.2021.698561 Evolutionary History of DNA Methylation Related Genes in Bivalvia: New Insights From Mytilus galloprovincialis Marco Gerdol1, Claudia La Vecchia2, Maria Strazzullo2, Pasquale De Luca3, Stefania Gorbi4, Francesco Regoli4, Alberto Pallavicini1,2 and Enrico D’Aniello2* 1 Department of Life Sciences, University of Trieste, Trieste, Italy, 2 Department of Biology and Evolution of Marine Organisms, Stazione Zoologica Anton Dohrn, Naples, Italy, 3 Research Infrastructures for Marine Biological Resources Department, Stazione Zoologica Anton Dohrn, Naples, Italy, 4 Department of Life and Environmental Sciences, Polytechnic University of Marche, Ancona, Italy DNA methylation is an essential epigenetic mechanism influencing gene expression in all organisms. In metazoans, the pattern of DNA methylation changes during embryogenesis and adult life. Consequently, differentiated cells develop a stable Edited by: and unique DNA methylation pattern that finely regulates mRNA transcription Giulia Furfaro, during development and determines tissue-specific gene expression. Currently, DNA University of Salento, Italy methylation remains poorly investigated in mollusks and completely unexplored in Reviewed by: Celine Cosseau, Mytilus galloprovincialis. To shed light on this process in this ecologically and Université de Perpignan Via Domitia, economically important bivalve, we screened its genome, detecting sequences France Ricard Albalat, homologous to DNA methyltransferases (DNMTs), methyl-CpG-binding domain (MBD) University of Barcelona, Spain proteins and Ten-eleven translocation methylcytosine dioxygenase (TET) previously *Correspondence: described in other organisms. We characterized the gene architecture and protein Enrico D’Aniello domains of the mussel sequences and studied their phylogenetic relationships with [email protected] the ortholog sequences from other bivalve species. -
Gangliogenesis in the Prosobranch Gastropod Ilyanassa Obsoleta By
Gangliogenesis in the Prosobranch Gastropod Ilyanassa obsoleta By: Miao-Fang Lin and Esther M. Leise Lin, M.-F. and Leise, E.M. (1996) Gangliogenesis in the Prosobranch Gastropod Ilyanassa obsoleta. Journal of Comparative Neurology 374(2):180-193. Made available courtesy of Wiley-Blackwell: The definitive version is available at http://www3.interscience.wiley.com ***Reprinted with permission. No further reproduction is authorized without written permission from Wiley-Blackwell. This version of the document is not the version of record. Figures and/or pictures may be missing from this format of the document.*** Abstract: We determined that the larval nervous system of Ilyanassa obsoleta contains paired cerebral, pleural, pedal, buccal, and intestinal ganglia and unpaired apical, osphradial, and visceral ganglia. We used a modified form of NADPH diaphorase histochemistry to compare the neuroanatomy of precompetent (including specimens 6, 8, and 12 days after hatching), competent, and metamorphosing larvae with postmetamorphic juveniles. This method highlighted ganglionic neuropils and allowed us to identify individual ganglia at various stages of development, thereby laying a foundation for concurrent histochemical studies. The first ganglia to form were the unpaired apical and osphradial ganglia and the paired cerebral and pedal ganglia. In larvae 6 days after hatching, the neuropil had already appeared in the apical and osphradial ganglia. Neuropil began to be apparent in the cerebral and pedal ganglia 2 days later. At that time, the pleural and buccal ganglia were identifiable and adjacent to the posterior edge of the cerebral ganglia. The ganglia of the visceral loop were concurrently recognizable, although the supraintestinal ganglion developed slightly earlier than the subintestinal and visceral ganglia. -
Inventory of Marine Fauna in Frenchman Bay and Blue Hill Bay, Maine 1926-1932
INVENTORY OF MARINE FAUNA IN FRENCHMAN BAY AND BLUE HILL BAY, MAINE 1926-1932 **** CATALOG OF WILLIAM PROCTER’S MARINE COLLECTIONS By: Glen Mittelhauser & Darrin Kelly Maine Natural History Observatory 2007 1 INVENTORY OF MARINE FAUNA IN FRENCHMAN BAY AND BLUE HILL BAY, MAINE 1926-1932 **** CATALOG OF WILLIAM PROCTER’S MARINE COLLECTIONS By: Glen Mittelhauser & Darrin Kelly Maine Natural History Observatory 2007 Catalog prepared by: Glen H. Mittelhauser Specimens cataloged by: Darrin Kelly Glen Mittelhauser Kit Sheehan Taxonomy assistance: Glen Mittelhauser, Maine Natural History Observatory Anne Favolise, Humboldt Field Research Institute Thomas Trott, Gerhard Pohle P.G. Ross 2 William Procter started work on the survey of the marine fauna of the Mount Desert Island region in the spring of 1926 after a summer’s spotting of the territory with a hand dredge. This work was continued from the last week in June until the first week of September through 1932. The specimens from this collection effort were brought back to Mount Desert Island recently. Although Procter noted that this inventorywas not intended to generate a complete list of all species recorded from the Mount Desert Island area, this inventory is the foundation on which all future work on the marine fauna in the region will build. An inven- tory of this magnitude has not been replicated in the region to date. This publication is the result of a major recovery effort for the collection initiated and funded by Acadia National Park. Many of the specimens in this collection were loosing preservative or were already dried out. Over a two year effort, Maine Natural History Observatory worked closely with Acadia National Park to re-house the collection in archival containers, re-hydrate specimens (through stepped concentrations of ethyl alcohol) that had dried, fully catalog the collection, and update the synonymy of specimens.