Breeding Program for Swine Production Goals USA Swine Genetics  Primary goal = Maximize Profit  Start with the best genetic merit GGP

 Improve the merit of the GGP animals

Dr. John Mabry  Use the most efficient Genetic Iowa Pork Industry Center System  Provide an adequate environment Iowa State University for the animals to express their Ames, Iowa, USA genetic merit

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USA Genetic System Best Genetic Merit Population

 Large number of purebred GGP animals

 Can identify where the genetically superior animals are within the population

 Demonstrated genetic improvement in the economically important traits

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National Program to Identify Duroc - Top Sires for TSI Ranked on Terminal Index (TSI) July 2004 the Genetically Superior Animals Name Pigs BF Days Lbs. TSI Reg. No. Owner Herds acc acc ------

ZMAC2 KOBE 55-1 20 -0.03 -5.34 1.02 131.6 248928001  One example is STAGES = Swine ZIERKE FARMS/ZMAC 1 SDF1 OUTERLIMITS 88 0.03 -6.60 -0.55 131.1 233822002 Testing and Genetic Evaluation STEWARTS DUROC FARM 2 ID2 TINSLEY 94-3 50 -0.03 -5.74 0.26 130.7 245573003 System ISLER GENETICS 1 WFD2 CORNHUSKER 253 0.00 -6.07 -0.33 129.8 245363004  Program of “across-herd” genetic WALDO FARMS 2 YFG1 NEXT LEVEL 41-2 97 -0.02 -5.13 0.46 128.8 241451002 evaluation GOOD FARMS 1 STN2 KOI 62-2 21 0.00 -5.25 0.04 127.8 247165002  Largest, most accurate national SWINE GENETICS INT 2 STN1 SENSOR 48-2 274 -0.02 -4.79 0.45 127.4 232844002 genetic evaluation program in the STEIN & STEWART 2 WFD1 CORNHUSKER 150 -0.03 -3.89 0.68 124.5 235862001 world WALDO FARMS 1 WFD2 KOBE 249-2 39 0.01 -4.25 0.23 124.4 249886002 WALDO FARMS 2

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1 Maternal Line Index Terminal Sire Index

115 113 135 111 109 125 Yorkshire Yorkshire 107 10 Pigs per Duroc 105 Duroc Hampshire 115 103 Hampshire 101 Landrace 105 99 97 95 Dollars Relative 95

4 1988 1989 1990 1991 1992 1993 199 1995 1996 1997 1998 1999 2000 1988 1990 1992 1994 1996 1998 2000 Birth year Birth year

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Steps For a Successful Importation General Breeding Plan Strategy

 Produce Duroc, Landrace and Yorkshire  Tour selected purebred swine farms in USA animals for GGP farm  Select purebred Yorkshire, Landrace and  Possibly produce GGP and GP purebred Duroc animals for purchase aniltllimals to sell

 Extensive health testing of pigs  Produce F1 (parent stock) females

 Delivery of pigs  Produce terminal boars (AI stud)

 Now, what do you do with them?

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Breeding Program Goals Genetic Improvement Program

 Want to make genetic improvement in  Selection (Which animals to purchase) the pigs you purchased Which , which animals in the breed, use  Want to minimize BV’s  Value of these products is the genetic  Mating System (How to mate them) merit of the animals Decide on number of desired purebred animals  Expressed as Breeding Value or BV Set up a mating plan

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2 Genetic Improvement Program Terminal Cross - F1 Female

Grandparent X Female Cross Y x L  Utililize traditional technology

 Utilize new genetic technologies X Parent Cross  Computerized data management system Duroc x F1 Y/L

 Real-time ultrasound technology

 BLUP based selection technology

Market Hogs

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Heterosis Heterosis Levels of Traits

11 11 10 10 ♦ Litters/sow/year = +18% 10 ♦ Litter size = +8% 9 ♦ Preweaning mortality = -5% 8 ♦ Growth rate = +5% 7 6 5 ♦ Pounds product/sow/year = +40% NBA

York York/Land Landrace

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Genetic System Structure Genetic System Heterosis

System Level Maternal Offspring GGP York sows x York boars  Yorks 3% GGP(York x York, Land x Land) 0% 0%

GP 12% GP (York x Land) 0% 100% York sows x Land boars  F1 parents 85% PS (Duroc x F1) 100% 100%

Parent F1 sows x Duroc boars  market hogs Entire Genetic System 85% 97%

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3 General Mating Plan Starting Your GGP Herd

 GGP = 3% (York and Landrace sows)  Which to use?  Best Y or L sows x Y or L boars  York or Landrace GGP gilts  How many of each breed?  Other Y or L sows x Y or L boars  York or Landrace GP gilts  GP = 12% (Yorkshire and Landrace sows)  Hliithihbd?How many lines within each breed?

 Y sows x Landrace boars LY parent gilts   How to mate the GGP to avoid  L sows x Yorkshire boars  LY parent gilts inbreeding?  Parent = 85% F1 sows

 F1 sows x Duroc boars  market hogs

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How Many of Each Breed? Number of Lines

 GGP herd size = minimum 50 sows per  Within each breed, get animals from 3- breed 4 unrelated lines

 The largggper the GGP the greater the potential  Make matings of unrelated lines to for genetic progress produce replacement GGP and GP  Need both maternal and terminal breeds animals  Terminal Durocs  Must separate the Duroc, Landrace and  Maternal Breeds Yorkshires into GGP lines  Yorkshire and Landrace sows

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GGP Unrelated Matings General Purebred Mating Plan Line A sow x Line B boar

 Divide the purchased into four separate lines (A, B, C, D)

 For the purebred matings: Line C sow x Line A boar Females From Line Mated To Sires From Line Offspring Given Line ID A B Females B, Males A

B C Females C, Males B

C D Females D, Males C

Line B sow x Line C boar D A Females A, Males D

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4 Enter Animals Into Inventory in Computer Program Information into Computer

 Entry date  Pedigree Info  Data management program(s)  Sire and Dam  ID (sow tag)  Need to monitor reproductive performance  Date of birth  Breed or Genetics  Need to be able to manage growth testing  Alternate ID  Landrace or YL  Need to estimate breeding value (BV)  Reg. number  Line  Tattoo id  Need to create indexes of BV’s for selection  Ear Notch  Origin  Each animal that has been brought to the farm  Waldo USA needs to be entered into inventory (sows and boars)

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Traits to Focus On for Profit Goal of Selection

 Identify the animals with the best genetic merit  Reproductive traits  Focus on economically important traits  farrowing rate, litter size, preweaning mortality, wean-estrus interval, non-productive sow days  Allow them to reproduce  Cull the othe r animals with lo we r genetic me rit  Growth traits  Result = Permanent improvement in  growth rate (ADG, days to market), feed conversion, mortality rate performance due to better genetics

 Carcass traits

 backfat, loin muscle area, percent lean, marbling, color, pH, water holding capacity

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Procedures to Identify Genetically Superior Animals Phenotypic Evaluation (Visual Appraisal)

1. Phenotypic evaluation  Look at the phenotype to Visual assessment estimate the genotype 2. Phenotypic evaluation  Structural Soundness Measure trait performance  Influences longevity 3. BLUP genetic evaluation  Reproductive Soundness Using trait measurements  Influences semen traits, farrowing rate

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5 BLUP Genetic Evaluation Phenotypic Evaluation (Measure Traits) (Using Measured Performance)

 Reduce environmental effects not related to  Objectively measure the phenotype to estimate the genotype genetics using computer based technology  Use of Contemporary group deviation  Litter size, semen quality = slight  Account for other fixed effects in computerized improvement data analysis  Days to market = moderate improvement  Include performance information of animals that  Percent lean = excellent improvement are relatives to better estimate the genetic merit of each animal

 Result = great increase in accuracy of selection Iowa Pork Industry Center Iowa Pork Industry Center

Selection of Replacement Selection of Boars for AI Females

 Should have EBV on boars for the  Must be of correct breed or breed combination economically important traits (top %)  GGP animals must be purebred  Maternal GGP should be LR or York  growth rate, lean percent, litter size, etc.  Terminal GGP should be Duroc  AI boars must be structurally correct

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Selection of Replacement Females Selection For Feet and Leg Soundness

 GGP females should  Breeding animals must be structurally correct be performance and mobile to carry out normal functions tested with EBV’s or  Research suggests that soundness is heritable EPD’s  All potential breeding animals should have  All replacement their structural soundness evaluated and those females should be that are unacceptable should not be selected structurally sound

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6 Soundness Scoring Scoring System For Soundness

 Score 1-5 for the front legs and 1-5 for rear legs  Add to get a total score of 1-10  Unacceptable = 1-3 points (severe problems that restrict ability to breed)  Good = 4-7 points (slight structural problems)  Excellent = 8-10 points

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Meat Quality Improvement of Carcass Quality

 Carcass Quality has two components  Ultimately, meat quality is  Composition (percent of lean) defined as a wholesome  Eating quality (marbling , pH, color) prodtthtttduct that tastes good ,  Need to measure in the live pig if possible has good value and  So the tested animals can be used for generates repeat sales breeding

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“Quality” Indicators Color Scores

 Color

 Marbling

 Firmness 1 23

 Water holding capacity

 pH

 Tenderness  Taste 45 6

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7 Marbling Scores Improvement of Carcass Quality

 We can measure composition accurately on the live animal, not eating quality 1 2 3 4  Imppgqyygrove eating quality by using terminal sire breed known for superior eating quality

5610

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Measuring Carcass Composition Real-time Ultrasound Evaluation Pig Holding Crate

 Breeding animal  Pig must be restrained evaluation and so that they can be selection measured accurately

 Eliminates need to  Scales today had too slaughter animal much room for the pig to

 Monitor lean growth move around and predict growth  Must be easy for the pig curves to enter and exit

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Anatomical Locations on the Pig Ultrasound Technology

 Uses high frequency sound waves to map tissue Last Rib boundaries  Sound waves received through quartz crystals

 SdSound waves refl fldbkdiffected back at different speed s 10th from different tissues Rib  Central processor collects time and distance information to form ultrasound image 5th Rib  Reports a measurement or image for the technician

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8 A-mode Ultrasound Easy to Use Ultrasound

 Introduced in 1950’s

 Single quartz crystal receives sound waves Must be easy to use

 Gives point estimate of characteristics of the tissue Must have probe designed of interest to measure backfat

 Digital read-out of depth or graphical representation of sound Digital readout is easy to waves read

 Accurate for backfat depth - inconsistent for loin depth

 Cannot measure loin Iowamuscle Pork Industry area Center Iowa Pork Industry Center

Renco Lean Meter B-mode Ultrasound or Real-time

 Multiple quartz crystals

 Aligned in sequence over a linear space (up to 18 cm)

 Creates a linear ultrasonic image displayed on a video monitor

 Real-time -- updated at high rate of speed

 Highly accurate for backfat and loin muscle area

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Real-time Ultrasound Machine, Probe and Accessories Example Ultrasound Image

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9 On-Farm Evaluation of Backfat Summary

 Measured at 10th rib  Purchase best animals from best genetic population  100 ± 10 kilograms  Breedinggg program should be complete and  Measure 5 cm off m idline simple

 Average both sides for A-mode  Testing program needs correct equipment  Single measurement for B-mode (holding scale, ultrasound machine)  Must start computerized data management  Backfat depth at midpoint of loin - include skin and all fat layers

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