Immunodeficient Mouse Models: an Overview José E
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
FK506-Binding Protein 12.6/1B, a Negative Regulator of [Ca2+], Rescues Memory and Restores Genomic Regulation in the Hippocampus of Aging Rats
This Accepted Manuscript has not been copyedited and formatted. The final version may differ from this version. A link to any extended data will be provided when the final version is posted online. Research Articles: Neurobiology of Disease FK506-Binding Protein 12.6/1b, a negative regulator of [Ca2+], rescues memory and restores genomic regulation in the hippocampus of aging rats John C. Gant1, Eric M. Blalock1, Kuey-Chu Chen1, Inga Kadish2, Olivier Thibault1, Nada M. Porter1 and Philip W. Landfield1 1Department of Pharmacology & Nutritional Sciences, University of Kentucky, Lexington, KY 40536 2Department of Cell, Developmental and Integrative Biology, University of Alabama at Birmingham, Birmingham, AL 35294 DOI: 10.1523/JNEUROSCI.2234-17.2017 Received: 7 August 2017 Revised: 10 October 2017 Accepted: 24 November 2017 Published: 18 December 2017 Author contributions: J.C.G. and P.W.L. designed research; J.C.G., E.M.B., K.-c.C., and I.K. performed research; J.C.G., E.M.B., K.-c.C., I.K., and P.W.L. analyzed data; J.C.G., E.M.B., O.T., N.M.P., and P.W.L. wrote the paper. Conflict of Interest: The authors declare no competing financial interests. NIH grants AG004542, AG033649, AG052050, AG037868 and McAlpine Foundation for Neuroscience Research Corresponding author: Philip W. Landfield, [email protected], Department of Pharmacology & Nutritional Sciences, University of Kentucky, 800 Rose Street, UKMC MS 307, Lexington, KY 40536 Cite as: J. Neurosci ; 10.1523/JNEUROSCI.2234-17.2017 Alerts: Sign up at www.jneurosci.org/cgi/alerts to receive customized email alerts when the fully formatted version of this article is published. -
Comprehensive Study of Nuclear Receptor DNA Binding Provides a Revised Framework for Understanding Receptor Specificity
ARTICLE https://doi.org/10.1038/s41467-019-10264-3 OPEN Comprehensive study of nuclear receptor DNA binding provides a revised framework for understanding receptor specificity Ashley Penvose 1,2,4, Jessica L. Keenan 2,3,4, David Bray2,3, Vijendra Ramlall 1,2 & Trevor Siggers 1,2,3 The type II nuclear receptors (NRs) function as heterodimeric transcription factors with the retinoid X receptor (RXR) to regulate diverse biological processes in response to endogenous 1234567890():,; ligands and therapeutic drugs. DNA-binding specificity has been proposed as a primary mechanism for NR gene regulatory specificity. Here we use protein-binding microarrays (PBMs) to comprehensively analyze the DNA binding of 12 NR:RXRα dimers. We find more promiscuous NR-DNA binding than has been reported, challenging the view that NR binding specificity is defined by half-site spacing. We show that NRs bind DNA using two distinct modes, explaining widespread NR binding to half-sites in vivo. Finally, we show that the current models of NR specificity better reflect binding-site activity rather than binding-site affinity. Our rich dataset and revised NR binding models provide a framework for under- standing NR regulatory specificity and will facilitate more accurate analyses of genomic datasets. 1 Department of Biology, Boston University, Boston, MA 02215, USA. 2 Biological Design Center, Boston University, Boston, MA 02215, USA. 3 Bioinformatics Program, Boston University, Boston, MA 02215, USA. 4These authors contributed equally: Ashley Penvose, Jessica L. Keenan. Correspondence -
A Computational Approach for Defining a Signature of Β-Cell Golgi Stress in Diabetes Mellitus
Page 1 of 781 Diabetes A Computational Approach for Defining a Signature of β-Cell Golgi Stress in Diabetes Mellitus Robert N. Bone1,6,7, Olufunmilola Oyebamiji2, Sayali Talware2, Sharmila Selvaraj2, Preethi Krishnan3,6, Farooq Syed1,6,7, Huanmei Wu2, Carmella Evans-Molina 1,3,4,5,6,7,8* Departments of 1Pediatrics, 3Medicine, 4Anatomy, Cell Biology & Physiology, 5Biochemistry & Molecular Biology, the 6Center for Diabetes & Metabolic Diseases, and the 7Herman B. Wells Center for Pediatric Research, Indiana University School of Medicine, Indianapolis, IN 46202; 2Department of BioHealth Informatics, Indiana University-Purdue University Indianapolis, Indianapolis, IN, 46202; 8Roudebush VA Medical Center, Indianapolis, IN 46202. *Corresponding Author(s): Carmella Evans-Molina, MD, PhD ([email protected]) Indiana University School of Medicine, 635 Barnhill Drive, MS 2031A, Indianapolis, IN 46202, Telephone: (317) 274-4145, Fax (317) 274-4107 Running Title: Golgi Stress Response in Diabetes Word Count: 4358 Number of Figures: 6 Keywords: Golgi apparatus stress, Islets, β cell, Type 1 diabetes, Type 2 diabetes 1 Diabetes Publish Ahead of Print, published online August 20, 2020 Diabetes Page 2 of 781 ABSTRACT The Golgi apparatus (GA) is an important site of insulin processing and granule maturation, but whether GA organelle dysfunction and GA stress are present in the diabetic β-cell has not been tested. We utilized an informatics-based approach to develop a transcriptional signature of β-cell GA stress using existing RNA sequencing and microarray datasets generated using human islets from donors with diabetes and islets where type 1(T1D) and type 2 diabetes (T2D) had been modeled ex vivo. To narrow our results to GA-specific genes, we applied a filter set of 1,030 genes accepted as GA associated. -
ADD1 Pt445) Antibody Catalogue No.:Abx326604
Datasheet Version: 1.0.0 Revision date: 02 Nov 2020 Alpha Adducin Phospho-Thr445 (ADD1 pT445) Antibody Catalogue No.:abx326604 Alpha Adducin (ADD1) (pT445) Antibody is a Rabbit Polyclonal against Alpha Adducin (ADD1) (pT445). Adducins are a family of cytoskeletal proteins encoded by three genes (alpha, beta, and gamma). Adducin acts as a heterodimer of the related alpha, beta, or gamma subunits. The protein encoded by this gene represents the alpha subunit. Alpha- and beta-adducin include a protease-resistant N-terminal region and a protease-sensitive, hydrophilic C-terminal region. Adducin binds with high affinity to Ca(2+)/calmodulin and is a substrate for protein kinases A and C. Target: Alpha Adducin Phospho-Thr445 (ADD1 pT445) Clonality: Polyclonal Target Modification: Thr445 Modification: Phosphorylation Reactivity: Human, Mouse, Rat Tested Applications: ELISA, IHC Host: Rabbit Recommended dilutions: IHC: 1/100 - 1/300, ELISA: 1/5000. Optimal dilutions/concentrations should be determined by the end user. Conjugation: Unconjugated Immunogen: Synthesized peptide derived from human Adducin α around the phosphorylation site of T445. Isotype: IgG Form: ForLiquid Reference Only Purification: Affinity Chromatography. Storage: Aliquot and store at -20°C. Avoid repeated freeze/thaw cycles. UniProt Primary AC: P35611 (UniProt, ExPASy) Q9QYC0 (UniProt, ExPASy) Gene Symbol: ADD1 GeneID: 118 v1.0.0 Abbexa Ltd, Cambridge, UK · Phone: +44 1223 755950 · Fax: +44 1223 755951 1 Abbexa LLC, Houston, TX, USA · Phone: +1 832 327 7413 www.abbexa.com · -
Contribution of T Cell-Mediated Immunity to the Resistance
0022-202X/ 78/ 7006 0345$02.00/ 0 THE JOURNAL OF I NVESTIGATIVE DERMATOLOGY, 70:345-347, 1978 Vol. 70, No. 6 Copyright © 1978 by The Williams & Wilkins Co. Printed in U.S.A. Contribution ofT Cell-mediated Immunity to the Resistance to Staphylococcal Infection SHINGO TSUDA, M.D., YOICHIRO SASAI, M.D., KIKUO MINAMI, M.D., AND KIKUO NOMOTO, M.D. Department of Dermatology, Kurume University School of Medicine, Kurume, Japan, and Department of Immunology, Institute for Cancer Research, Kyushu University School of Medicine, Fuhuoha, Japan. Abscess formation in nude mice after subcutaneous -, DNase + and hemolysis of a type. The bacteria were cultured in a inoculation of Staphylococcus aureus (S. aureus) was meat infusion broth (distilled water 100 ml, meat extract obtained from more extensive and prolonged as compared with that in beef 5 gm, NaCl5 gm and NaHC03 0.5 gm) at 37°C for 24 hr, centrifuged phenotypically normallittermates. Abscess formation in at 3000 rpm for 30 min and resuspended in saline. Bacterial suspensions comparable to 1.7 x 107 colony-forming markedly by whole-body ir were adjusted to a dose nude mice was augmented units/ ml after estimation with a spectrophotometer at 580 nm (Hita radiation. Not only T cell-mediated immunity but also chi). radiosensitive, nonimmune phagocytosis appear to con tribute to the resistance against staphylococcal infec Procedures for Experimental Infection tion. Each mouse was inoculated subcutaneously with 0.1 ml of bacterial suspension into the back and the infected site was examined macro scopically 1, 2, 3, 5, 7, 10, 14, 21 and 27 days later. -
6510.Full.Pdf
(CANCER RESEARCH 48. 6510-6516. November 15, 1988) Quantitative Studies on the Transplantability of Murine and Human Tumors into the Brain and Subcutaneous Tissues of NCr/Sed Nude Mice1 Anthony L. Zietman, Herman D. Suit,2 Jonathan R. Ramsay, Vlatko Silobrcic, and Robert S. Sedlacek Kdtt'in L. Steele Laboratory for Radiation Biology; Department of Radiation Medicine, Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts 02114 ABSTRACT (5, 6), and cyclophosphamide (7); with use of immunologically immature young animals (8-10); or with transplantation into The transplantability of experimental tumors into the brain (i.e.) and immunologically privileged sites such as the brain (11-13). s.c. tissues of C3Hf/Sed and athymic NCr/Sed nude mice was examined Nude mice, though athymic, do possess small numbers of T- using quantitative cell transplantation assays. Studies using the immune- competent Oil animals showed that brain is a more favorable site for cells (14, 15), which have been shown to be capable of cytotoxic the transplantation of syngeneic tumor than s.c. tissue and that this is allo- and xenoreactivity (16, 17). In addition, their numbers of true for nonimmunogenic as well as immunogenic tumors. The capacity splenic and nodal B-cells have been reported to be normal (9) of the brain to act as an immunological sanctuary can be overwhelmed or higher (15) than that found in hétérozygotes.Theactivity of by a strong, systemic, secondary immune response such as that evoked NK3 cells and peritoneal macrophages may also be higher (15, by the methylcholanthrene-induced sarcoma FSal. In studies performed 18, 19). -
DR1 Antibody A
Revision 1 C 0 2 - t DR1 Antibody a e r o t S Orders: 877-616-CELL (2355) [email protected] Support: 877-678-TECH (8324) 7 4 Web: [email protected] 4 www.cellsignal.com 6 # 3 Trask Lane Danvers Massachusetts 01923 USA For Research Use Only. Not For Use In Diagnostic Procedures. Applications: Reactivity: Sensitivity: MW (kDa): Source: UniProt ID: Entrez-Gene Id: WB, IP H M R Mk Endogenous 19 Rabbit Q01658 1810 Product Usage Information 7. Yeung, K.C. et al. (1994) Genes Dev 8, 2097-109. 8. Kim, T.K. et al. (1995) J Biol Chem 270, 10976-81. Application Dilution 9. Kamada, K. et al. (2001) Cell 106, 71-81. Western Blotting 1:1000 Immunoprecipitation 1:50 Storage Supplied in 10 mM sodium HEPES (pH 7.5), 150 mM NaCl, 100 µg/ml BSA and 50% glycerol. Store at –20°C. Do not aliquot the antibody. Specificity / Sensitivity DR1 Antibody recognizes endogenous levels of total DR1 protein. Species Reactivity: Human, Mouse, Rat, Monkey Species predicted to react based on 100% sequence homology: D. melanogaster, Zebrafish, Dog, Pig Source / Purification Polyclonal antibodies are produced by immunizing animals with a synthetic peptide corresponding to residues surrounding Gly112 of human DR1 protein. Antibodies are purified by protein A and peptide affinity chromatography. Background Down-regulator of transcription 1 (DR1), also known as negative cofactor 2-β (NC2-β), forms a heterodimer with DR1 associated protein 1 (DRAP1)/NC2-α and acts as a negative regulator of RNA polymerase II and III (RNAPII and III) transcription (1-5). -
Construction of Subtype‑Specific Prognostic Gene Signatures for Early‑Stage Non‑Small Cell Lung Cancer Using Meta Feature Selection Methods
2366 ONCOLOGY LETTERS 18: 2366-2375, 2019 Construction of subtype‑specific prognostic gene signatures for early‑stage non‑small cell lung cancer using meta feature selection methods CHUNSHUI LIU1*, LINLIN WANG2*, TIANJIAO WANG3 and SUYAN TIAN4 1Department of Hematology, The First Hospital of Jilin University, Changchun, Jilin 130021; 2Department of Ultrasound, China‑Japan Union Hospital of Jilin University, Changchun, Jilin 130033; 3The State Key Laboratory of Special Economic Animal Molecular Biology, Institute of Special Wild Economic Animal and Plant Science, Chinese Academy Agricultural Science, Changchun, Jilin 130133; 4Division of Clinical Research, The First Hospital of Jilin University, Changchun, Jilin 130021, P.R. China Received September 17, 2018; Accepted June 5, 2019 DOI: 10.3892/ol.2019.10563 Abstract. Feature selection in the framework of meta-analyses surgical resection of the tumors (3). Postoperative adjuvant (meta feature selection), combines meta-analysis with a feature chemotherapy may improve the survival rate of patients selection process and thus allows meta-analysis feature selec- with a poor prognosis. However, it is not recommended for tion across multiple datasets. In the present study, a meta patients with stage IA NSCLC, whose five‑year survival rate feature selection procedure that fitted a multiple Cox regres- is approximately 70% (2). Therefore, using biomarkers to sion model to estimate the effect size of a gene in individual identify patients with NSCLC who may benefit from adjuvant studies and to identify the overall effect of the gene using a chemotherapy is of clinical importance. meta-analysis model was proposed. The method was used to A biomarker is a measurable indicator of a biological identify prognostic gene signatures for lung adenocarcinoma state or condition (4). -
Anti-DR1 Antibody (ARG58552)
Product datasheet [email protected] ARG58552 Package: 50 μl anti-DR1 antibody Store at: -20°C Summary Product Description Rabbit Polyclonal antibody recognizes DR1 Tested Reactivity Ms Predict Reactivity Hu, Rat, Cow, Dog, Gpig, Hrs, Pig, Rb, Zfsh Tested Application WB Host Rabbit Clonality Polyclonal Isotype IgG Target Name DR1 Antigen Species Human Immunogen Synthetic peptide of Human DR1. (within the following sequence: KKTISPEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKASSRLENLG) Conjugation Un-conjugated Alternate Names Dr1l; NC2; TATA-binding protein-associated phosphoprotein; Protein Dr1; NC2-beta; 1700121L09Rik; NC2beta; Down-regulator of transcription 1; Negative cofactor 2-beta; NC2B; NCB2 Application Instructions Predict Reactivity Note Predicted homology based on immunogen sequence: Cow: 100%; Dog: 100%; Guinea Pig: 93%; Horse: 100%; Human: 100%; Pig: 100%; Rabbit: 100%; Rat: 100%; Zebrafish: 100% Application table Application Dilution WB 1 µg/ml Application Note * The dilutions indicate recommended starting dilutions and the optimal dilutions or concentrations should be determined by the scientist. Positive Control Mouse kidney Calculated Mw 19 kDa Properties Form Liquid Purification Affinity purified. Buffer PBS, 0.09% (w/v) Sodium azide and 2% Sucrose. Preservative 0.09% (w/v) Sodium azide Stabilizer 2% Sucrose Concentration Batch dependent: 0.5 - 1 mg/ml www.arigobio.com 1/2 Storage instruction For continuous use, store undiluted antibody at 2-8°C for up to a week. For long-term storage, aliquot and store at -20°C or below. Storage in frost free freezers is not recommended. Avoid repeated freeze/thaw cycles. Suggest spin the vial prior to opening. The antibody solution should be gently mixed before use. Note For laboratory research only, not for drug, diagnostic or other use. -
Role and Regulation of the P53-Homolog P73 in the Transformation of Normal Human Fibroblasts
Role and regulation of the p53-homolog p73 in the transformation of normal human fibroblasts Dissertation zur Erlangung des naturwissenschaftlichen Doktorgrades der Bayerischen Julius-Maximilians-Universität Würzburg vorgelegt von Lars Hofmann aus Aschaffenburg Würzburg 2007 Eingereicht am Mitglieder der Promotionskommission: Vorsitzender: Prof. Dr. Dr. Martin J. Müller Gutachter: Prof. Dr. Michael P. Schön Gutachter : Prof. Dr. Georg Krohne Tag des Promotionskolloquiums: Doktorurkunde ausgehändigt am Erklärung Hiermit erkläre ich, dass ich die vorliegende Arbeit selbständig angefertigt und keine anderen als die angegebenen Hilfsmittel und Quellen verwendet habe. Diese Arbeit wurde weder in gleicher noch in ähnlicher Form in einem anderen Prüfungsverfahren vorgelegt. Ich habe früher, außer den mit dem Zulassungsgesuch urkundlichen Graden, keine weiteren akademischen Grade erworben und zu erwerben gesucht. Würzburg, Lars Hofmann Content SUMMARY ................................................................................................................ IV ZUSAMMENFASSUNG ............................................................................................. V 1. INTRODUCTION ................................................................................................. 1 1.1. Molecular basics of cancer .......................................................................................... 1 1.2. Early research on tumorigenesis ................................................................................. 3 1.3. Developing -
Androgen Signaling in Sertoli Cells Lavinia Vija
Androgen Signaling in Sertoli Cells Lavinia Vija To cite this version: Lavinia Vija. Androgen Signaling in Sertoli Cells. Human health and pathology. Université Paris Sud - Paris XI, 2014. English. NNT : 2014PA11T031. tel-01079444 HAL Id: tel-01079444 https://tel.archives-ouvertes.fr/tel-01079444 Submitted on 2 Nov 2014 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. UNIVERSITE PARIS-SUD ÉCOLE DOCTORALE : Signalisation et Réseaux Intégratifs en Biologie Laboratoire Récepteurs Stéroïdiens, Physiopathologie Endocrinienne et Métabolique Reproduction et Développement THÈSE DE DOCTORAT Soutenue le 09/07/2014 par Lavinia Magdalena VIJA SIGNALISATION ANDROGÉNIQUE DANS LES CELLULES DE SERTOLI Directeur de thèse : Jacques YOUNG Professeur (Université Paris Sud) Composition du jury : Président du jury : Michael SCHUMACHER DR1 (Université Paris Sud) Rapporteurs : Serge LUMBROSO Professeur (Université Montpellier I) Mohamed BENAHMED DR1 (INSERM U1065, Université Nice)) Examinateurs : Nathalie CHABBERT-BUFFET Professeur (Université Pierre et Marie Curie) Gabriel -
The Unfolded Protein Response and Its Potential Role In
F1000Research 2015, 4:103 Last updated: 22 JUL 2020 RESEARCH ARTICLE The unfolded protein response and its potential role in Huntington ́s disease elucidated by a systems biology approach [version 1; peer review: 2 approved] Ravi Kiran Reddy Kalathur1, Joaquin Giner-Lamia1, Susana Machado1, Kameshwar R S Ayasolla1, Matthias E. Futschik1,2 1Centre for Biomedical Research, University of Algarve, Faro, 8005-139, Portugal 2Centre of Marine Sciences, University of Algarve, Faro, 8005-139, Portugal First published: 01 May 2015, 4:103 Open Peer Review v1 https://doi.org/10.12688/f1000research.6358.1 Latest published: 02 Mar 2016, 4:103 https://doi.org/10.12688/f1000research.6358.2 Reviewer Status Abstract Invited Reviewers Huntington ́s disease (HD) is a progressive, neurodegenerative disease 1 2 with a fatal outcome. Although the disease-causing gene (huntingtin) has been known for over 20 years, the exact mechanisms leading to neuronal version 2 cell death are still controversial. One potential mechanism contributing to (revision) report the massive loss of neurons observed in the brain of HD patients could be 02 Mar 2016 the unfolded protein response (UPR) activated by accumulation of misfolded proteins in the endoplasmic reticulum (ER). As an adaptive response to counter-balance accumulation of un- or misfolded proteins, the version 1 UPR upregulates transcription of chaperones, temporarily attenuates new 01 May 2015 report report translation, and activates protein degradation via the proteasome. However, persistent ER stress and an activated UPR can also cause apoptotic cell death. Although different studies have indicated a role for the Scott Zeitlin, University of Virginia, UPR in HD, the evidence remains inconclusive.