Ericaceae) in South Asia
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Flowering Plant Families of Northwestern California: a Tabular Comparison
Humboldt State University Digital Commons @ Humboldt State University Botanical Studies Open Educational Resources and Data 12-2019 Flowering Plant Families of Northwestern California: A Tabular Comparison James P. Smith Jr Humboldt State University, [email protected] Follow this and additional works at: https://digitalcommons.humboldt.edu/botany_jps Part of the Botany Commons Recommended Citation Smith, James P. Jr, "Flowering Plant Families of Northwestern California: A Tabular Comparison" (2019). Botanical Studies. 95. https://digitalcommons.humboldt.edu/botany_jps/95 This Flora of Northwest California-Regional is brought to you for free and open access by the Open Educational Resources and Data at Digital Commons @ Humboldt State University. It has been accepted for inclusion in Botanical Studies by an authorized administrator of Digital Commons @ Humboldt State University. For more information, please contact [email protected]. FLOWERING PLANT FAMILIES OF NORTHWESTERN CALIFORNIA: A TABULAR COMPARISON James P. Smith, Jr. Professor Emeritus of Botany Department of Biological Sciences Humboldt State University December 2019 Scientific Name Habit Leaves Sexuality • Floral Formula Common Name Fruit Type • Comments Aceraceae TSV SC:O U-m [P] • K 4-5 C 4-5 A 4-10 G (2) Maple Paired samaras • leaves often palmately lobed Acoraceae H S:A U-m • P 3+3 A 6 or G (3) Sweet Flag Berry • aquatic; aromatic rhizomes Aizoaceae HS S:AO B • P [3] 5 [8] A 0-4 Gsi (2-5-4) Ice Plant Capsule (berry-like) • fleshy; stamens divided, petaloid Alismataceae -
Flora of the Carolinas, Virginia, and Georgia, Working Draft of 17 March 2004 -- ERICACEAE
Flora of the Carolinas, Virginia, and Georgia, Working Draft of 17 March 2004 -- ERICACEAE ERICACEAE (Heath Family) A family of about 107 genera and 3400 species, primarily shrubs, small trees, and subshrubs, nearly cosmopolitan. The Ericaceae is very important in our area, with a great diversity of genera and species, many of them rather narrowly endemic. Our area is one of the north temperate centers of diversity for the Ericaceae. Along with Quercus and Pinus, various members of this family are dominant in much of our landscape. References: Kron et al. (2002); Wood (1961); Judd & Kron (1993); Kron & Chase (1993); Luteyn et al. (1996)=L; Dorr & Barrie (1993); Cullings & Hileman (1997). Main Key, for use with flowering or fruiting material 1 Plant an herb, subshrub, or sprawling shrub, not clonal by underground rhizomes (except Gaultheria procumbens and Epigaea repens), rarely more than 3 dm tall; plants mycotrophic or hemi-mycotrophic (except Epigaea, Gaultheria, and Arctostaphylos). 2 Plants without chlorophyll (fully mycotrophic); stems fleshy; leaves represented by bract-like scales, white or variously colored, but not green; pollen grains single; [subfamily Monotropoideae; section Monotropeae]. 3 Petals united; fruit nodding, a berry; flower and fruit several per stem . Monotropsis 3 Petals separate; fruit erect, a capsule; flower and fruit 1-several per stem. 4 Flowers few to many, racemose; stem pubescent, at least in the inflorescence; plant yellow, orange, or red when fresh, aging or drying dark brown ...............................................Hypopitys 4 Flower solitary; stem glabrous; plant white (rarely pink) when fresh, aging or drying black . Monotropa 2 Plants with chlorophyll (hemi-mycotrophic or autotrophic); stems woody; leaves present and well-developed, green; pollen grains in tetrads (single in Orthilia). -
The Loss of Photosynthetic Pathways in the Plastid and Nuclear Genomes of the Non- Photosynthetic Mycoheterotrophic Eudicot Monotropa Hypopitys Nikolai V
The Author(s) BMC Plant Biology 2016, 16(Suppl 3):238 DOI 10.1186/s12870-016-0929-7 RESEARCH Open Access The loss of photosynthetic pathways in the plastid and nuclear genomes of the non- photosynthetic mycoheterotrophic eudicot Monotropa hypopitys Nikolai V. Ravin*, Eugeny V. Gruzdev, Alexey V. Beletsky, Alexander M. Mazur, Egor B. Prokhortchouk, Mikhail A. Filyushin, Elena Z. Kochieva, Vitaly V. Kadnikov, Andrey V. Mardanov and Konstantin G. Skryabin From The International Conference on Bioinformatics of Genome Regulation and Structure\Systems Biology (BGRS\SB-2016) Novosibirsk, Russia. 29 August-2 September 2016 Abstract Background: Chloroplasts of most plants are responsible for photosynthesis and contain a conserved set of about 110 genes that encode components of housekeeping gene expression machinery and photosynthesis-related functions. Heterotrophic plants obtaining nutrients from other organisms and their plastid genomes represent model systems in which to study the effects of relaxed selective pressure on photosynthetic function. The most evident is a reduction in the size and gene content of the plastome, which correlates with the loss of genes encoding photosynthetic machinery which become unnecessary. Transition to a non-photosynthetic lifestyle is expected also to relax the selective pressure on photosynthetic machinery in the nuclear genome, however, the corresponding changes are less known. Results: Here we report the complete sequence of the plastid genome of Monotropa hypopitys, an achlorophyllous obligately mycoheterotrophic plant belonging to the family Ericaceae. The plastome of M. hypopitys is greatly reduced in size (35,336 bp) and lacks the typical quadripartite structure with two single-copy regions and an inverted repeat. -
The YABBY Genes of Leaf and Leaf-Like Organ Polarity in Leafless Plant Monotropa Hypopitys
Hindawi International Journal of Genomics Volume 2018, Article ID 7203469, 16 pages https://doi.org/10.1155/2018/7203469 Research Article The YABBY Genes of Leaf and Leaf-Like Organ Polarity in Leafless Plant Monotropa hypopitys 1 1,2 1 1 Anna V. Shchennikova , Marya A. Slugina, Alexey V. Beletsky, Mikhail A. Filyushin, 1 1 1,2 1 Andrey A. Mardanov, Olga A. Shulga, Elena Z. Kochieva, Nikolay V. Ravin , 1,2 and Konstantin G. Skryabin 1Federal State Institution “Federal Research Centre “Fundamentals of Biotechnology” of the Russian Academy of Sciences”, Moscow 119071, Russia 2Lomonosov Moscow State University, Moscow 119991, Russia Correspondence should be addressed to Anna V. Shchennikova; [email protected] Received 16 January 2018; Revised 2 March 2018; Accepted 18 March 2018; Published 24 April 2018 Academic Editor: Ferenc Olasz Copyright © 2018 Anna V. Shchennikova et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Monotropa hypopitys is a mycoheterotrophic, nonphotosynthetic plant acquiring nutrients from the roots of autotrophic trees through mycorrhizal symbiosis, and, similar to other extant plants, forming asymmetrical lateral organs during development. The members of the YABBY family of transcription factors are important players in the establishment of leaf and leaf-like organ polarity in plants. This is the first report on the identification of YABBY genes in a mycoheterotrophic plant devoid of aboveground vegetative organs. Seven M. hypopitys YABBY members were identified and classified into four clades. By structural analysis of putative encoded proteins, we confirmed the presence of YABBY-defining conserved domains and identified novel clade-specific motifs. -
Botanist Interior 43.1
2011 THE MICHIGAN BOTANIST 129 THE MYCORRHIZAL SYSTEM OF PTEROSPORA ANDROMEDEA (PINE-DROPS) IN WEST MICHIGAN INFERRED FROM DNA SEQUENCE DATA Jianhua Li*, Jeffrey Corajod, Holly Vander Stel, and Austin Homkes Department of Biology Hope College 35 E 12th St., Schaap Science Center, Holland, MI 49423 ABSTRACT Pterospora andromedea is a mycoheterotrophic plant with a disjunct distribution between west - ern and eastern North America and obtains carbon and nutrients indirectly from photosynthetic plants via an ectomycorrhizal fungal bridge. In this study, we used DNA sequence data to determine the or - ganisms involved in the system in West Michigan. Our results suggest that at least two photosyn - thetic plants ( Tsuga and Acer ) are the potential carbon source of the system and that Pterospora is specifically associated with an unidentified species of subgenus Amylopogon of Rhizopogon . Previ - ous studies have shown that seed germination of Pterospora relies on chemical cues from the fungus, implying a dominant role of the fungus in the system. Our field observations suggest that repeated branching of Pterospora roots increases the mass production of the fungal mycelia and lead us to speculate that Pterospora may be a mutualistic partner, not a parasite or exploiter, in the mycorrhizal system. KEYWORDS: Pterospora , nrDNA ITS, rbc L, mutualism, mycorrhizal, subgenus Amylopogon , Rhizopogon . Pterospora andromedea Torr. (pine-drops) is a mycoheterotrophic plant rely - ing on fungal host for germination, growth, and development (Bakshi 1959 ). Molecular studies have shown its close relationship with other myco - heterotrophic plants in Ericaceae such as Monotropa , Allotropa , and Sarcodes (Cullings 1994 ; Kron et al. 2002 ). Pine-drops show a disjunct distribution between the eastern and western North America with an extension in the west to northern Mexico (Bakshi 1959 ). -
Division of Plant Developmental Genetics
National Institute for Basic Biology Environmental Biology DIVISION OF PLANT DEVELOPMENTAL GENETICS (ADJUNCT) complemented all known morphological phenotypes caused by an-1 mutation in Arabidopsis, suggesting that the AN function is conserved between angiosperms and gymnosperms (Li et al. 2008). Furthermore, our detailed Professor (Adjunct) analysis of intracellular localization suggested that AN have TSUKAYA, Hirokazu a unique role (or roles) in Golgi-related functions. Further Assistant Professor YAMAGUCHI, Takahiro analyses of AN functions are ongoing. Postdoctoral Fellows ISHIKAWA, Naoko On the other hand, constitutive over-expression of deletion USAMI, Takeshi series of ROT4 revealed that a 32-amino-acid core region is YANO, Satoshi enough to exhibit the ROT4 function when over-expressed. Visiting Scientists GOTOH, Ayako ICHIHASHI, Yasunori 1-2 Evolution of establishment mechanisms of leaf NAKAYAMA, Hokuto polarities in monocots TAKASE, Masahide Technical Assistants YAMAGUCHI, Chinami We have recently started to attempt an understanding of the NAGURA, Masako genetic basis of the development of unifacial leaves that are KADOWAKI, Tamaka known only from monocot clades. Our analyses indicated Secretary KOJIMA, Yoko that the unifacial character might be due to overall changes in all polarities around leaves (i.e. adaxial-abaxial, distal- proximal, and central-lateral polarities). Moreover, the The leaf is the fundamental unit of the shoot system, which genetic controls of leaf polarities were revealed to differ, at is composed of the leaf and stem. The diversity of plant least in part, between eudicot and rice, a monocot model forms is mostly attributable to variation of leaf and floral species. Understanding the differences in the genetic organs, which are modified leaves. -
RNA-Seq Highlights Parallel and Contrasting Patterns in the Evolution of the Nuclear Genome of Fully Mycoheterotrophic Plants Mikhail I
Schelkunov et al. BMC Genomics (2018) 19:602 https://doi.org/10.1186/s12864-018-4968-3 RESEARCH ARTICLE Open Access RNA-seq highlights parallel and contrasting patterns in the evolution of the nuclear genome of fully mycoheterotrophic plants Mikhail I. Schelkunov1* , Aleksey A. Penin1,2,3 and Maria D. Logacheva1,4,5* Abstract Background: While photosynthesis is the most notable trait of plants, several lineages of plants (so-called full heterotrophs) have adapted to obtain organic compounds from other sources. The switch to heterotrophy leads to profound changes at the morphological, physiological and genomic levels. Results: Here, we characterize the transcriptomes of three species representing two lineages of mycoheterotrophic plants: orchids (Epipogium aphyllum and Epipogium roseum) and Ericaceae (Hypopitys monotropa). Comparative analysis is used to highlight the parallelism between distantly related fully heterotrophic plants. In both lineages, we observed genome-wide elimination of nuclear genes that encode proteins related to photosynthesis, while systems associated with protein import to plastids as well as plastid transcription and translation remain active. Genes encoding components of plastid ribosomes that have been lost from the plastid genomes have not been transferred to the nuclear genomes; instead, some of the encoded proteins have been substituted by homologs. The nuclear genes of both Epipogium species accumulated nucleotide substitutions twice as rapidly as their photosynthetic relatives; in contrast, no increase in the substitution rate was observed in H. monotropa. Conclusions: Full heterotrophy leads to profound changes in nuclear gene content. The observed increase in the rate of nucleotide substitutions is lineage specific, rather than a universal phenomenon among non-photosynthetic plants. -
Root-Associated Fungal Communities in Three Pyroleae Species and Their Mycobiont Sharing with Surrounding Trees in Subalpine Coniferous Forests on Mount Fuji, Japan
Mycorrhiza DOI 10.1007/s00572-017-0788-6 ORIGINAL ARTICLE Root-associated fungal communities in three Pyroleae species and their mycobiont sharing with surrounding trees in subalpine coniferous forests on Mount Fuji, Japan Shuzheng Jia 1 & Takashi Nakano 2 & Masahira Hattori3 & Kazuhide Nara1 Received: 23 February 2017 /Accepted: 20 June 2017 # The Author(s) 2017. This article is an open access publication Abstract Pyroleae species are perennial understory shrubs, were dominated by Wilcoxina species, which were absent many of which are partial mycoheterotrophs. Most fungi col- from the surrounding ECM roots in the same soil blocks. onizing Pyroleae roots are ectomycorrhizal (ECM) and share These results indicate that mycobiont sharing with surround- common mycobionts with their Pyroleae hosts. However, ing trees does not equally occur among Pyroleae plants, some such mycobiont sharing has neither been examined in depth of which may develop independent mycorrhizal associations before nor has the interspecific variation in sharing among with ECM fungi, as suggested in O. secunda at our research Pyroleae species. Here, we examined root-associated fungal sites. communities in three co-existing Pyroleae species, including Pyrola alpina, Pyrola incarnata,andOrthilia secunda,with Keywords Pyroleae . Mixotrophy . Mycorrhizal network . reference to co-existing ECM fungi on the surrounding trees Niche overlap . ITS barcoding in the same soil blocks in subalpine coniferous forests. We identified 42, 75, and 18 fungal molecular operational taxo- nomic units in P. alpina, P. incarnata,andO. secunda roots, Introduction respectively. Mycobiont sharing with surrounding trees, which was defined as the occurrence of the same mycobiont Most land plants perform photosynthesis and can live autotro- between Pyroleae and surrounding trees in each soil block, phically. -
Conservation Assessment for Pterospora Andromedea Nutt
Conservation Assessment For Pterospora andromedea Nutt. (Pine-drops) USDA Forest Service, Eastern Region Hiawatha National Forest November 2004 This Conservation Assessment was prepared to compile the published and unpublished information on Pterospora andromedea Nutt. This report provides information to serve as a Conservation Assessment for the Eastern Region of the Forest Service. It is an administrative study only and does not represent a management decision by the U.S. Forest Service. Although the best scientific information available was used and subject experts were consulted in preparation of this document and its review, it is expected that new information will arise. In the spirit of continuous learning and adaptive management, if the reader has any information that will assist in conserving this species, please contact the Eastern Region of the Forest Service – Threatened and Endangered Species Program at 310 Wisconsin Avenue, Suite 580 Milwaukee, Wisconsin 53203. Conservation Assessment for Pterospora andromedea ii Acknowledgements Outside Reviewers: We would like to thank our academic reviewers and agency reviewers outside of the United States Forest Service for their helpful comments on this manuscript. • Phyllis Higman, Botanist, Michigan Natural Features Inventory National Forest Reviewers: We also thank our internal National Forest reviewers for their suggestions and corrections and for providing element occurrences for their National Forests. Complete contact information is available under Contacts section. • Jan Schultz, Forest Plant Ecologist, on the Hiawatha National Forest • Sue Trull, Forest Botanist, on the Ottawa National Forest • Ian Shackleford, Botanist, on the Ottawa National Forest Herbarium and Heritage Data: We appreciate the sharing of occurrence information for this species from Heritage personnel both in the United States and Canada, along with the helpful assistance of Herbarium personnel. -
243-246 42(3) 06.엄안흠.Fm
한국균학회지 The Korean Journal of Mycology Research Note Monotropoid Mycorrhizal Characteristics of Monotropa uniflora (Ericaceae) Collected from a Forest in Korea Eun-Hwa Lee and Ahn-Heum Eom* Department of Biology Education, Korea National University of Education, Cheongju 363-791, Korea ABSTRACT : The roots of Monotropa uniflora were collected from a forest in Korea. Morphological characteristics of monotropid mycorrhizas of the plants were determined. Thick mantles covered the roots and fungal pegs inside the epidermal cells of the roots were observed. Fungal symbionts were identified by sequence analysis of internal transcribed spacer region. Phylogenetic analysis based on the sequences demonstrated that the fungus was the most closely related to Russula heterophylla. The result support the strong specificity between M. uniflora and Russula species. KEYWORDS : Monotropoid mycorrhizas, Monotropa uniflora, Russula sp. Monotropoideae is a subfamily of the Ericaceae, and The mycorrhizal structure has typical ectomycorrhizal most of the species in this subfamily are achlorophyllous, characteristics, including a hyphal mantle covering the and thus, heterotrophic plants [1]. These plants are not roots and Hartig nets between cortex cells of the roots. able to fix carbon by themselves because they have very In addition, fungal hyphae penetrate and produce fungal low amounts of chlorophyll-related pigments [2]. They pegs inside the epidermal cells of plant roots, which is obtain fixed carbon from photosynthetic plants through the characteristic structure of monotropoid mycorrhizas. mycorrhizal hyphae; plants exhibiting this relationship Fungal pegs have been known as structures that trans- are referred to as mycoheterotrophic plants [3, 4]. The locate photosynthetic carbon compounds from the fungi mycorrhizal relationship between Monotropoideae plants to photosynthetic plants. -
RNA-Seq Highlights Parallel and Contrasting Patterns in the Evolution of the Nuclear Genome of Holo-Mycoheterotrophic Plants
bioRxiv preprint doi: https://doi.org/10.1101/183202; this version posted September 1, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-ND 4.0 International license. RNA-seq highlights parallel and contrasting patterns in the evolution of the nuclear genome of holo-mycoheterotrophic plants M.I. Schelkunov 1, 2,*, A.A. Penin 1, 2, 3, M.D. Logacheva 1, 2,* 1 - Institute for Information Transmission Problems, Russian Academy of Sciences, Moscow, Russia 2 - Lomonosov Moscow State University, A.N Belozersky Institute of Physico-Chemical Biology, Moscow, Russia 3 - Lomonosov Moscow State University, Faculty of Biology, Moscow, Russia * - corresponding authors, [email protected], [email protected] Summary While photosynthesis is the most notable trait of plants, several lineages of plants (so-called holo- heterotrophs) have adapted to obtain organic compounds from other sources. The switch to heterotrophy leads to profound changes at the morphological, physiological and genomic levels. Here, we characterize the transcriptomes of three species representing two lineages of mycoheterotrophic plants: orchids (Epipogium aphyllum and Epipogium roseum) and Ericaceae (Hypopitys monotropa). Comparative analysis is used to highlight the parallelism between distantly related holo-heterotrophic plants. In both lineages, we observed genome-wide elimination of nuclear genes that encode proteins related to photosynthesis, while systems associated with protein import to plastids as well as plastid transcription and translation remain active. Genes encoding components of plastid ribosomes that have been lost from the plastid genomes have not been transferred to the nuclear genomes; instead, some of the encoded proteins have been substituted by homologs. -
Tracheophyte of Xiao Hinggan Ling in China: an Updated Checklist
Biodiversity Data Journal 7: e32306 doi: 10.3897/BDJ.7.e32306 Taxonomic Paper Tracheophyte of Xiao Hinggan Ling in China: an updated checklist Hongfeng Wang‡§, Xueyun Dong , Yi Liu|,¶, Keping Ma | ‡ School of Forestry, Northeast Forestry University, Harbin, China § School of Food Engineering Harbin University, Harbin, China | State Key Laboratory of Vegetation and Environmental Change, Institute of Botany, Chinese Academy of Sciences, Beijing, China ¶ University of Chinese Academy of Sciences, Beijing, China Corresponding author: Hongfeng Wang ([email protected]) Academic editor: Daniele Cicuzza Received: 10 Dec 2018 | Accepted: 03 Mar 2019 | Published: 27 Mar 2019 Citation: Wang H, Dong X, Liu Y, Ma K (2019) Tracheophyte of Xiao Hinggan Ling in China: an updated checklist. Biodiversity Data Journal 7: e32306. https://doi.org/10.3897/BDJ.7.e32306 Abstract Background This paper presents an updated list of tracheophytes of Xiao Hinggan Ling. The list includes 124 families, 503 genera and 1640 species (Containing subspecific units), of which 569 species (Containing subspecific units), 56 genera and 6 families represent first published records for Xiao Hinggan Ling. The aim of the present study is to document an updated checklist by reviewing the existing literature, browsing the website of National Specimen Information Infrastructure and additional data obtained in our research over the past ten years. This paper presents an updated list of tracheophytes of Xiao Hinggan Ling. The list includes 124 families, 503 genera and 1640 species (Containing subspecific units), of which 569 species (Containing subspecific units), 56 genera and 6 families represent first published records for Xiao Hinggan Ling. The aim of the present study is to document an updated checklist by reviewing the existing literature, browsing the website of National Specimen Information Infrastructure and additional data obtained in our research over the past ten years.