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Permian–Triassic Non-Marine Algae of Gondwana—Distributions
Earth-Science Reviews 212 (2021) 103382 Contents lists available at ScienceDirect Earth-Science Reviews journal homepage: www.elsevier.com/locate/earscirev Review Article Permian–Triassic non-marine algae of Gondwana—Distributions, natural T affinities and ecological implications ⁎ Chris Maysa,b, , Vivi Vajdaa, Stephen McLoughlina a Swedish Museum of Natural History, Box 50007, SE-104 05 Stockholm, Sweden b Monash University, School of Earth, Atmosphere and Environment, 9 Rainforest Walk, Clayton, VIC 3800, Australia ARTICLE INFO ABSTRACT Keywords: The abundance, diversity and extinction of non-marine algae are controlled by changes in the physical and Permian–Triassic chemical environment and community structure of continental ecosystems. We review a range of non-marine algae algae commonly found within the Permian and Triassic strata of Gondwana and highlight and discuss the non- mass extinctions marine algal abundance anomalies recorded in the immediate aftermath of the end-Permian extinction interval Gondwana (EPE; 252 Ma). We further review and contrast the marine and continental algal records of the global biotic freshwater ecology crises within the Permian–Triassic interval. Specifically, we provide a case study of 17 species (in 13 genera) palaeobiogeography from the succession spanning the EPE in the Sydney Basin, eastern Australia. The affinities and ecological im- plications of these fossil-genera are summarised, and their global Permian–Triassic palaeogeographic and stra- tigraphic distributions are collated. Most of these fossil taxa have close extant algal relatives that are most common in freshwater, brackish or terrestrial conditions, and all have recognizable affinities to groups known to produce chemically stable biopolymers that favour their preservation over long geological intervals. -
Systematics of Coccal Green Algae of the Classes Chlorophyceae and Trebouxiophyceae
School of Doctoral Studies in Biological Sciences University of South Bohemia in České Budějovice Faculty of Science SYSTEMATICS OF COCCAL GREEN ALGAE OF THE CLASSES CHLOROPHYCEAE AND TREBOUXIOPHYCEAE Ph.D. Thesis Mgr. Lenka Štenclová Supervisor: Doc. RNDr. Jan Kaštovský, Ph.D. University of South Bohemia in České Budějovice České Budějovice 2020 This thesis should be cited as: Štenclová L., 2020: Systematics of coccal green algae of the classes Chlorophyceae and Trebouxiophyceae. Ph.D. Thesis Series, No. 20. University of South Bohemia, Faculty of Science, School of Doctoral Studies in Biological Sciences, České Budějovice, Czech Republic, 239 pp. Annotation Aim of the review part is to summarize a current situation in the systematics of the green coccal algae, which were traditionally assembled in only one order: Chlorococcales. Their distribution into the lower taxonomical unites (suborders, families, subfamilies, genera) was based on the classic morphological criteria as shape of the cell and characteristics of the colony. Introduction of molecular methods caused radical changes in our insight to the system of green (not only coccal) algae and green coccal algae were redistributed in two of newly described classes: Chlorophyceae a Trebouxiophyceae. Representatives of individual morphologically delimited families, subfamilies and even genera and species were commonly split in several lineages, often in both of mentioned classes. For the practical part, was chosen two problematical groups of green coccal algae: family Oocystaceae and family Scenedesmaceae - specifically its subfamily Crucigenioideae, which were revised using polyphasic approach. Based on the molecular phylogeny, relevance of some old traditional morphological traits was reevaluated and replaced by newly defined significant characteristics. -
Evolution of the Chlorophyta: Insights from Chloroplast Phylogenomic Analyses
Journal of Systematics JSE and Evolution doi: 10.1111/jse.12248 Review Evolution of the Chlorophyta: Insights from chloroplast phylogenomic analyses Ling Fang1, Frederik Leliaert2,3, Zhen-Hua Zhang1, David Penny4, and Bo-Jian Zhong1* 1College of Life Sciences, Nanjing Normal University, Nanjing 210023, China 2Botanic Garden Meise, 1860 Meise, Belgium 3Phycology Research Group, Biology Department, Ghent University, 9000 Ghent, Belgium 4Institute of Fundamental Sciences, Massey University, Palmerston North 4442, New Zealand *Author for correspondence. E-mail: [email protected]. Tel.: 86-25-85891726. Received 6 January 2017; Accepted 4 March 2017; Article first published online 5 May 2017 Abstract Green plants comprise two main clades: the Streptophyta, which include charophyte green algae and the embryophytic land plants, and the Chlorophyta including a wide diversity of marine, freshwater, and terrestrial green algae. Establishing a robust phylogeny is important to provide an evolutionary framework for comparative and functional studies. During the last two decades our understanding of the evolution of green algae has profoundly changed, first by phylogenetic analyses of nuclear ribosomal sequence data (mainly 18S), and more recently by analyses of multi-gene and chloroplast genomic data. The phylogenetic relationships among the main streptophytan lineages have been extensively studied and are now relatively well resolved. Although a lot of progress has been made in the last few years, the phylogenetic relationships in the Chlorophyta are still less well established. Here we review how chloroplast genomic data have contributed to address relationships among the main chlorophytan lineages. We highlight recent progress and conflicts among different studies, and discuss future directions in chloroplast phylogenomics of green algae. -
Chloroplast Phylogenomic Analysis Resolves Deep-Level Relationships Within the Green Algal Class Trebouxiophyceae Claude Lemieux*, Christian Otis and Monique Turmel
Lemieux et al. BMC Evolutionary Biology 2014, 14:211 http://www.biomedcentral.com/1471-2148/14/211 RESEARCH ARTICLE Open Access Chloroplast phylogenomic analysis resolves deep-level relationships within the green algal class Trebouxiophyceae Claude Lemieux*, Christian Otis and Monique Turmel Abstract Background: The green algae represent one of the most successful groups of photosynthetic eukaryotes, but compared to their land plant relatives, surprisingly little is known about their evolutionary history. This is in great part due to the difficulty of recognizing species diversity behind morphologically similar organisms. The Trebouxiophyceae is a species-rich class of the Chlorophyta that includes symbionts (e.g. lichenized algae) as well as free-living green algae. Members of this group display remarkable ecological variation, occurring in aquatic, terrestrial and aeroterrestrial environments. Because a reliable backbone phylogeny is essential to understand the evolutionary history of the Trebouxiophyceae, we sought to identify the relationships among the major trebouxiophycean lineages that have been previously recognized in nuclear-encoded 18S rRNA phylogenies. To this end, we used a chloroplast phylogenomic approach. Results: We determined the sequences of 29 chlorophyte chloroplast genomes and assembled amino acid and nucleotide data sets derived from 79 chloroplast genes of 61 chlorophytes, including 35 trebouxiophyceans. The amino acid- and nucleotide-based phylogenies inferred using maximum likelihood and Bayesian methods and various models of sequence evolution revealed essentially the same relationships for the trebouxiophyceans. Two major groups were identified: a strongly supported clade of 29 taxa (core trebouxiophyceans) that is sister to the Chlorophyceae + Ulvophyceae and a clade comprising the Chlorellales and Pedinophyceae that represents a basal divergence relative to the former group.