Lecture 3: September 3 3.1 Exact Counting
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Edinburgh Research Explorer
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Edinburgh Research Explorer Edinburgh Research Explorer A Holant Dichotomy: Is the FKT Algorithm Universal? Citation for published version: Cai, J-Y, Fu, Z, Guo, H & Williams, T 2015, A Holant Dichotomy: Is the FKT Algorithm Universal? in IEEE 56th Annual Symposium on Foundations of Computer Science, FOCS 2015, Berkeley, CA, USA, 17-20 October, 2015. IEEE, pp. 1259-1276, Foundations of Computer Science 2015, Berkley, United States, 17/10/15. DOI: 10.1109/FOCS.2015.81 Digital Object Identifier (DOI): 10.1109/FOCS.2015.81 Link: Link to publication record in Edinburgh Research Explorer Document Version: Peer reviewed version Published In: IEEE 56th Annual Symposium on Foundations of Computer Science, FOCS 2015, Berkeley, CA, USA, 17-20 October, 2015 General rights Copyright for the publications made accessible via the Edinburgh Research Explorer is retained by the author(s) and / or other copyright owners and it is a condition of accessing these publications that users recognise and abide by the legal requirements associated with these rights. Take down policy The University of Edinburgh has made every reasonable effort to ensure that Edinburgh Research Explorer content complies with UK legislation. If you believe that the public display of this file breaches copyright please contact [email protected] providing details, and we will remove access to the work immediately and investigate your claim. Download date: 05. Apr. 2019 A Holant Dichotomy: Is the FKT Algorithm Universal? Jin-Yi Cai∗ Zhiguo Fu∗y Heng Guo∗z Tyson Williams∗x [email protected] [email protected] [email protected] [email protected] Abstract We prove a complexity dichotomy for complex-weighted Holant problems with an arbitrary set of symmetric constraint functions on Boolean variables. -
Matchgates Revisited
THEORY OF COMPUTING, Volume 10 (7), 2014, pp. 167–197 www.theoryofcomputing.org RESEARCH SURVEY Matchgates Revisited Jin-Yi Cai∗ Aaron Gorenstein Received May 17, 2013; Revised December 17, 2013; Published August 12, 2014 Abstract: We study a collection of concepts and theorems that laid the foundation of matchgate computation. This includes the signature theory of planar matchgates, and the parallel theory of characters of not necessarily planar matchgates. Our aim is to present a unified and, whenever possible, simplified account of this challenging theory. Our results include: (1) A direct proof that the Matchgate Identities (MGI) are necessary and sufficient conditions for matchgate signatures. This proof is self-contained and does not go through the character theory. (2) A proof that the MGI already imply the Parity Condition. (3) A simplified construction of a crossover gadget. This is used in the proof of sufficiency of the MGI for matchgate signatures. This is also used to give a proof of equivalence between the signature theory and the character theory which permits omittable nodes. (4) A direct construction of matchgates realizing all matchgate-realizable symmetric signatures. ACM Classification: F.1.3, F.2.2, G.2.1, G.2.2 AMS Classification: 03D15, 05C70, 68R10 Key words and phrases: complexity theory, matchgates, Pfaffian orientation 1 Introduction Leslie Valiant introduced matchgates in a seminal paper [24]. In that paper he presented a way to encode computation via the Pfaffian and Pfaffian Sum, and showed that a non-trivial, though restricted, fragment of quantum computation can be simulated in classical polynomial time. Underlying this magic is a way to encode certain quantum states by a classical computation of perfect matchings, and to simulate certain ∗Supported by NSF CCF-0914969 and NSF CCF-1217549. -
The Geometry of Dimer Models
THE GEOMETRY OF DIMER MODELS DAVID CIMASONI Abstract. This is an expanded version of a three-hour minicourse given at the winterschool Winterbraids IV held in Dijon in February 2014. The aim of these lectures was to present some aspects of the dimer model to a geometri- cally minded audience. We spoke neither of braids nor of knots, but tried to show how several geometrical tools that we know and love (e.g. (co)homology, spin structures, real algebraic curves) can be applied to very natural problems in combinatorics and statistical physics. These lecture notes do not contain any new results, but give a (relatively original) account of the works of Kaste- leyn [14], Cimasoni-Reshetikhin [4] and Kenyon-Okounkov-Sheffield [16]. Contents Foreword 1 1. Introduction 1 2. Dimers and Pfaffians 2 3. Kasteleyn’s theorem 4 4. Homology, quadratic forms and spin structures 7 5. The partition function for general graphs 8 6. Special Harnack curves 11 7. Bipartite graphs on the torus 12 References 15 Foreword These lecture notes were originally not intended to be published, and the lectures were definitely not prepared with this aim in mind. In particular, I would like to arXiv:1409.4631v2 [math-ph] 2 Nov 2015 stress the fact that they do not contain any new results, but only an exposition of well-known results in the field. Also, I do not claim this treatement of the geometry of dimer models to be complete in any way. The reader should rather take these notes as a personal account by the author of some selected chapters where the words geometry and dimer models are not completely irrelevant, chapters chosen and organized in order for the resulting story to be almost self-contained, to have a natural beginning, and a happy ending. -
Lectures 4 and 6 Lecturer: Michel X
18.438 Advanced Combinatorial Optimization Feb 13 and 25, 2014 Lectures 4 and 6 Lecturer: Michel X. Goemans Scribe: Zhenyu Liao and Michel X. Goemans Today, we will use an algebraic approach to solve the matching problem. Our goal is to derive an algebraic test for deciding if a graph G = (V; E) has a perfect matching. We may assume that the number of vertices is even since this is a necessary condition for having a perfect matching. First, we will define a few basic needed notations. Definition 1 A skew-symmetric matrix A is a square matrix which satisfies AT = −A, i.e. if A = (aij) we have aij = −aji for all i; j. For a graph G = (V; E) with jV j = n and jEj = m, we construct a n × n skew-symmetric matrix A = (aij) with an entry aij = −aji for each edge (i; j) 2 E and aij = 0 if (i; j) is not an edge; the values aij for the edges will be specified later. Recall: Definition 2 The determinant of matrix A is n X Y det(A) = sgn(σ) aiσ(i) σ2Sn i=1 where Sn is the set of all permutations of n elements and the sgn(σ) is defined to be 1 if the number of inversions in σ is even and −1 otherwise. Note that for a skew-symmetric matrix A, det(A) = det(−AT ) = (−1)n det(A). So if n is odd we have det(A) = 0. Consider K4, the complete graph on 4 vertices, and thus 0 1 0 a12 a13 a14 B−a12 0 a23 a24C A = B C : @−a13 −a23 0 a34A −a14 −a24 −a34 0 By computing its determinant one observes that 2 det(A) = (a12a34 − a13a24 + a14a23) : First, it is the square of a polynomial q(a) in the entries of A, and moreover this polynomial has a monomial precisely for each perfect matching of K4. -
Computations in Algebraic Geometry with Macaulay 2
Computations in algebraic geometry with Macaulay 2 Editors: D. Eisenbud, D. Grayson, M. Stillman, and B. Sturmfels Preface Systems of polynomial equations arise throughout mathematics, science, and engineering. Algebraic geometry provides powerful theoretical techniques for studying the qualitative and quantitative features of their solution sets. Re- cently developed algorithms have made theoretical aspects of the subject accessible to a broad range of mathematicians and scientists. The algorith- mic approach to the subject has two principal aims: developing new tools for research within mathematics, and providing new tools for modeling and solv- ing problems that arise in the sciences and engineering. A healthy synergy emerges, as new theorems yield new algorithms and emerging applications lead to new theoretical questions. This book presents algorithmic tools for algebraic geometry and experi- mental applications of them. It also introduces a software system in which the tools have been implemented and with which the experiments can be carried out. Macaulay 2 is a computer algebra system devoted to supporting research in algebraic geometry, commutative algebra, and their applications. The reader of this book will encounter Macaulay 2 in the context of concrete applications and practical computations in algebraic geometry. The expositions of the algorithmic tools presented here are designed to serve as a useful guide for those wishing to bring such tools to bear on their own problems. A wide range of mathematical scientists should find these expositions valuable. This includes both the users of other programs similar to Macaulay 2 (for example, Singular and CoCoA) and those who are not interested in explicit machine computations at all. -
A5730107.Pdf
International OPEN ACCESS Journal Of Modern Engineering Research (IJMER) Applications of Bipartite Graph in diverse fields including cloud computing 1Arunkumar B R, 2Komala R Prof. and Head, Dept. of MCA, BMSIT, Bengaluru-560064 and Ph.D. Research supervisor, VTU RRC, Belagavi Asst. Professor, Dept. of MCA, Sir MVIT, Bengaluru and Ph.D. Research Scholar,VTU RRC, Belagavi ABSTRACT: Graph theory finds its enormous applications in various diverse fields. Its applications are evolving as it is perfect natural model and able to solve the problems in a unique way.Several disciplines even though speak about graph theory that is only in wider context. This paper pinpoints the applications of Bipartite graph in diverse field with a more points stressed on cloud computing. KEY WORDS: Graph theory, Bipartite graph cloud computing, perfect matching applications I. INTRODUCTION Graph theory has emerged as most approachable for all most problems in any field. In recent years, graph theory has emerged as one of the most sociable and fruitful methods for analyzing chemical reaction networks (CRNs). Graph theory can deal with models for which other techniques fail, for example, models where there is incomplete information about the parameters or that are of high dimension. Models with such issues are common in CRN theory [16]. Graph theory can find its applications in all most all disciplines of science, engineering, technology and including medical fields. Both in the view point of theory and practical bipartite graphs are perhaps the most basic of entities in graph theory. Until now, several graph theory structures including Bipartite graph have been considered only as a special class in some wider context in the discipline such as chemistry and computer science [1]. -
Pfaffian Orientations, Flat Embeddings, and Steinberg's Conjecture
PFAFFIAN ORIENTATIONS, FLAT EMBEDDINGS, AND STEINBERG'S CONJECTURE A Thesis Presented to The Academic Faculty by Peter Whalen In Partial Fulfillment of the Requirements for the Degree Doctor of Philosophy in the School of Mathematics Georgia Institute of Technology May 2014 PFAFFIAN ORIENTATIONS, FLAT EMBEDDINGS, AND STEINBERG'S CONJECTURE Approved by: Robin Thomas, Advisor Vijay Vazarani School of Mathematics College of Computing Georgia Institute of Technology Georgia Institute of Technology Sergey Norin Xingxing Yu Department of Mathematics and School of Mathematics Statistics Georgia Institute of Technology McGill University William Trotter Date Approved: 15 April 2014 School of Mathematics Georgia Institute of Technology To Krista iii ACKNOWLEDGEMENTS First and foremost, I would like to thank my advisor, Robin Thomas, for his years of guidance and encouragement. He has provided a constant stream of problems, ideas and opportunities and I am grateful for his continuous support. Robin has had the remarkable ability to present a problem and the exact number of hints and suggestions to allow me to push the boundaries of what I can do. Under his tutelage, I've grown both as a mathematician and as a professional. But perhaps his greatest gift is his passion, for mathematics and for his students. As a mentor and as a role-model, I'm grateful to him for his inspiration. I'd like to thank my undergraduate advisor, Sergey Norin, without whom I would have never fallen in love with graph theory. It is a rare teacher that truly changes a life; I'd like to thank Paul Seymour and Robert Perrin for being two that sent me down this path. -
Enumeration Problems on Lattices
Enumeration Problems on Lattices by Evans Doe Ocansey Thesis presented in partial fulfilment of the requirements for the degree of Master of Science in Mathematics in the Faculty of Science at Stellenbosch University Department of Mathematics, University of Stellenbosch, Private Bag X1, Matieland 7602, South Africa. Supervisor: Prof. Stephan Wagner December 2012 Stellenbosch University http://scholar.sun.ac.za Declaration By submitting this thesis electronically, I declare that the entirety of the work contained therein is my own, original work, that I am the sole author thereof (save to the extent explicitly otherwise stated), that reproduction and publication thereof by Stellenbosch University will not infringe any third party rights and that I have not previously in its entirety or in part submitted it for obtaining any qualification. Signature: . Evans Doe Ocansey 2012/12/20 Date: . Copyright © 2012 Stellenbosch University All rights reserved. i Stellenbosch University http://scholar.sun.ac.za Abstract Enumeration Problems on Lattices Evans Doe Ocansey Department of Mathematics, University of Stellenbosch, Private Bag X1, Matieland 7602, South Africa. Thesis: MSc (Mathematics) December 2012 The main objective of our study is enumerating spanning trees τ(G) and perfect match- ings PM(G) on graphs G and lattices L. We demonstrate two methods of enumerating spanning trees of any connected graph, namely the matrix-tree theorem and as a special value of the Tutte polynomial T (G; x; y). We present a general method for counting spanning trees on lattices in d ≥ 2 dimen- sions. In particular we apply this method on the following regular lattices with d = 2: rectangular, triangular, honeycomb, kagomé, diced, 9 · 3 lattice and its dual lattice to derive a explicit formulas for the number of spanning trees of these lattices of finite sizes. -
Mapping the Complexity of Counting Problems
Mapping the complexity of counting problems Heng Guo Queen Mary, University of London [email protected] 1 Computational Counting The study of computational counting was initiated by Leslie Valiant in the late 70s. In the seminal papers [32, 33], he defined the computational complexity class #P, the counting counterpart of NP, and showed that the counting version of tractable decision problems can be #P-complete. One such example is counting perfect matchings (#PM). These work revealed some fundamental differences between counting problems and decision problems and stimulated a lot of research in the directions of both structural complexity theory and algorithmic design. One of the crowning results in the first direction is Toda’s theorem [31], stating that #P contains the whole polynomial hierarchy, and in the second direction we have witnessed the success of Markov chain Monte Carlo algorithms [24, 23]. A typical counting problem is #Sat, which asks the number of satisfying as- signments of a given CNF formula. An equivalent way to recast this problem is to give each assignment weight 1 if it satisfies the formula, or 0 otherwise. Then the goal is to compute the sum of all weights. Moreover, this weight can be de- composed into a product of weights of all clauses. Thus we are interested in a sum-of-product quantity (e.g. see Eq. (1) in Section 2), which is usually called the partition function. In fact, the partition function has received immense attention by statistical physicists long before computer scientists. It is a central quantity from which one can deduce various properties of a field or a system. -
On the Computation of Pfaffians?
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Elsevier - Publisher Connector DISCRETE APPLIED MATHEMATICS ELSEVIER Discrete Applied Mathematics 51 (1994) 269-275 On the computation of pfaffians? G. Galbiati” and F. Maffiolibs* “Universitir di Pavia, Italy bPolitecnico di Milano, Milano, Italy (Received 21 October 1991) Abstract We present an efficient algorithm for computing the pfaffian of a matrix whose elements belong to an integral domain. Relevant applications are exact value problems in matching and matroid theory. 1. Introduction This work deals with efficient ways of computing the pfaffian of a skew-symmetric matrix whose elements belong to an integral domain. Pfaffians play an important role in matching problems [9], and in their natural generalization into matroid parity problems [3,8]. Since for every skew-symmetric matrix of even order it is well known [7] that its determinant is equal to the square of the pfaffian of the matrix, in the solution of existence versions of the above mentioned matching and matroid parity problems, the computation of the pfaffian can be substituted by the computation of the determinant. However, in the solution of the corresponding exact value problems, computing pfaffians becomes essential [2,3]. The possibility of directly computing pfaffians was already pointed out in [l]. This paper presents an efficient algorithm for computing the pfaffian of a matrix whose elements belong to an integral domain. When applied to an integral matrix, similarly to Edmonds’ algorithm for computing the determinant [4], this algorithm works with elements of bounded magnitude, namely bounded above by the magni- tude of any minor of the given matrix. -
An Exploration of the Permanent-Determinant Method
An exploration of the permanent-determinant method Greg Kuperberg UC Davis [email protected] Abstract The permanent-determinant method and its generalization, the Hafnian- Pfaffian method, are methods to enumerate perfect matchings of plane graphs that were discovered by P. W. Kasteleyn. We present several new techniques and arguments related to the permanent-determinant with consequences in enu- merative combinatorics. Here are some of the results that follow from these techniques: 1. If a bipartite graph on the sphere with 4n vertices is invariant under the antipodal map, the number of matchings is the square of the number of matchings of the quotient graph. 2. The number of matchings of the edge graph of a graph with vertices of degree at most 3 is a power of 2. 3. The three Carlitz matrices whose determinants count a × b × c plane partitions all have the same cokernel. 4. Two symmetry classes of plane partitions can be enumerated with almost no calculation. Submitted: October 16, 1998; Accepted: November 9, 1998 [Also available as math.CO/9810091] The permanent-determinant method and its generalization, the Hafnian-Pfaffian method, is a method to enumerate perfect matchings of plane graphs that was dis- covered by P. W. Kasteleyn [18]. Given a bipartite plane graph Z, the method pro- duces a matrix whose determinant is the number of perfect matchings of Z.Given a non-bipartite plane graph Z, it produces a Pfaffian with the same property. The method can be used to enumerate symmetry classes of plane partitions [21, 22] and domino tilings of an Aztec diamond [45] and is related to some recent factorizations of the number of matchings of plane graphs with symmetry [5, 15]. -
Arxiv:1910.11142V1 [Cs.DS] 22 Oct 2019
Tractable Minor-free Generalization of Planar Zero-field Ising Models Tractable Minor-free Generalization of Planar Zero-field Ising Models Valerii Likhosherstov [email protected] Department of Engineering University of Cambridge Cambridge, UK Yury Maximov [email protected] Theoretical Division and Center for Nonlinear Studies Los Alamos National Laboratory Los Alamos, NM, USA Michael Chertkov [email protected] Graduate Program in Applied Mathematics University of Arizona Tucson, AZ, USA Editor: Abstract We present a new family of zero-field Ising models over N binary variables/spins obtained by consecutive \gluing" of planar and O(1)-sized components and subsets of at most three vertices into a tree. The polynomial time algorithm of the dynamic programming type for solving exact inference (computing partition function) and exact sampling (generating i.i.d. samples) consists in a sequential application of an efficient (for planar) or brute-force (for O(1)-sized) inference and sampling to the components as a black box. To illustrate utility of the new family of tractable graphical models, we first build a polynomial algorithm for inference and sampling of zero-field Ising models over K33-minor-free topologies and over K5-minor-free topologies|both are extensions of the planar zero-field Ising models| which are neither genus- no treewidth-bounded. Second, we demonstrate empirically an improvement in the approximation quality of the NP-hard problem of inference over the square-grid Ising model in a node-dependent non-zero \magnetic" field. Keywords: Graphical model, Ising model, partition function, statistical inference. arXiv:1910.11142v1 [cs.DS] 22 Oct 2019 1.