Holographic Algorithms
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Lecture 4 1 the Permanent of a Matrix
Grafy a poˇcty - NDMI078 April 2009 Lecture 4 M. Loebl J.-S. Sereni 1 The permanent of a matrix 1.1 Minc's conjecture The set of permutations of f1; : : : ; ng is Sn. Let A = (ai;j)1≤i;j≤n be a square matrix with real non-negative entries. The permanent of the matrix A is n X Y perm(A) := ai,σ(i) : σ2Sn i=1 In 1973, Br`egman[4] proved M´ınc’sconjecture [18]. n×n Pn Theorem 1 (Br`egman,1973). Let A = (ai;j)1≤i;j≤n 2 f0; 1g . Set ri := j=1 ai;j. Then, n Y 1=ri perm(A) ≤ (ri!) : i=1 Further, if ri > 0 for every i 2 f1; 2; : : : ; ng, then there is equality if and only if up to permutations of rows and columns, A is a block-diagonal matrix, each block being a square matrix with all entries equal to 1. Several proofs of this result are known, the original being combinatorial. In 1978, Schrijver [22] found a neat and short proof. A probabilistic description of this proof is presented in the book of Alon and Spencer [3, Chapter 2]. The one we will see in Lecture 5 uses the concept of entropy, and was found by Radhakrishnan [20] in the late nineties. It is a nice illustration of the use of entropy to count combinatorial objects. 1.2 The van der Waerden conjecture A square matrix M = (mij)1≤i;j≤n of non-negative real numbers is doubly stochastic if the sum of the entries of every line is equal to 1, and the same holds for the sum of the entries of each column. -
Lecture 12 – the Permanent and the Determinant
Lecture 12 { The permanent and the determinant Uriel Feige Department of Computer Science and Applied Mathematics The Weizman Institute Rehovot 76100, Israel [email protected] June 23, 2014 1 Introduction Given an order n matrix A, its permanent is X Yn per(A) = aiσ(i) σ i=1 where σ ranges over all permutations on n elements. Its determinant is X Yn σ det(A) = (−1) aiσ(i) σ i=1 where (−1)σ is +1 for even permutations and −1 for odd permutations. A permutation is even if it can be obtained from the identity permutation using an even number of transpo- sitions (where a transposition is a swap of two elements), and odd otherwise. For those more familiar with the inductive definition of the determinant, obtained by developing the determinant by the first row of the matrix, observe that the inductive defini- tion if spelled out leads exactly to the formula above. The same inductive definition applies to the permanent, but without the alternating sign rule. The determinant can be computed in polynomial time by Gaussian elimination, and in time n! by fast matrix multiplication. On the other hand, there is no polynomial time algorithm known for computing the permanent. In fact, Valiant showed that the permanent is complete for the complexity class #P , which makes computing it as difficult as computing the number of solutions of NP-complete problems (such as SAT, Valiant's reduction was from Hamiltonicity). For 0/1 matrices, the matrix A can be thought of as the adjacency matrix of a bipartite graph (we refer to it as a bipartite adjacency matrix { technically, A is an off-diagonal block of the usual adjacency matrix), and then the permanent counts the number of perfect matchings. -
Complexity Dichotomies of Counting Problems
Electronic Colloquium on Computational Complexity, Report No. 93 (2011) Complexity Dichotomies of Counting Problems Pinyan Lu Microsoft Research Asia. [email protected] Abstract In order to study the complexity of counting problems, several inter- esting frameworks have been proposed, such as Constraint Satisfaction Problems (#CSP) and Graph Homomorphisms. Recently, we proposed and explored a novel alternative framework, called Holant Problems. It is a refinement with a more explicit role for constraint functions. Both graph homomorphism and #CSP can be viewed as special sub-frameworks of Holant Problems. One reason such frameworks are interesting is because the language is expressive enough so that they can express many natural counting problems, while specific enough so that it is possible to prove complete classification theorems on their complexity, which are called di- chotomy theorems. From the unified prospective of a Holant framework, we summarize various dichotomies obtained for counting problems and also proof techniques used. This survey presents material from the talk given by the author at the 4-th International Congress of Chinese Math- ematicians (ICCM 2010). 1 Introduction The complexity of counting problems is a fascinating subject. Valiant defined the class #P to capture most of these counting problems [Val79b]. Beyond the complexity of individual problems, there has been a great deal of interest in proving complexity dichotomy theorems which state that for a wide class of counting problems, every problem in the class is either computable in polynomial time (tractable) or #P-hard. One such framework is called counting Constraint Satisfaction Problems (#CSP) [CH96, BD03, DGJ07, Bul08, CLX09b, DR10b, CCL11]. -
Edinburgh Research Explorer
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Edinburgh Research Explorer Edinburgh Research Explorer A Holant Dichotomy: Is the FKT Algorithm Universal? Citation for published version: Cai, J-Y, Fu, Z, Guo, H & Williams, T 2015, A Holant Dichotomy: Is the FKT Algorithm Universal? in IEEE 56th Annual Symposium on Foundations of Computer Science, FOCS 2015, Berkeley, CA, USA, 17-20 October, 2015. IEEE, pp. 1259-1276, Foundations of Computer Science 2015, Berkley, United States, 17/10/15. DOI: 10.1109/FOCS.2015.81 Digital Object Identifier (DOI): 10.1109/FOCS.2015.81 Link: Link to publication record in Edinburgh Research Explorer Document Version: Peer reviewed version Published In: IEEE 56th Annual Symposium on Foundations of Computer Science, FOCS 2015, Berkeley, CA, USA, 17-20 October, 2015 General rights Copyright for the publications made accessible via the Edinburgh Research Explorer is retained by the author(s) and / or other copyright owners and it is a condition of accessing these publications that users recognise and abide by the legal requirements associated with these rights. Take down policy The University of Edinburgh has made every reasonable effort to ensure that Edinburgh Research Explorer content complies with UK legislation. If you believe that the public display of this file breaches copyright please contact [email protected] providing details, and we will remove access to the work immediately and investigate your claim. Download date: 05. Apr. 2019 A Holant Dichotomy: Is the FKT Algorithm Universal? Jin-Yi Cai∗ Zhiguo Fu∗y Heng Guo∗z Tyson Williams∗x [email protected] [email protected] [email protected] [email protected] Abstract We prove a complexity dichotomy for complex-weighted Holant problems with an arbitrary set of symmetric constraint functions on Boolean variables. -
3.1 Matchings and Factors: Matchings and Covers
1 3.1 Matchings and Factors: Matchings and Covers This copyrighted material is taken from Introduction to Graph Theory, 2nd Ed., by Doug West; and is not for further distribution beyond this course. These slides will be stored in a limited-access location on an IIT server and are not for distribution or use beyond Math 454/553. 2 Matchings 3.1.1 Definition A matching in a graph G is a set of non-loop edges with no shared endpoints. The vertices incident to the edges of a matching M are saturated by M (M-saturated); the others are unsaturated (M-unsaturated). A perfect matching in a graph is a matching that saturates every vertex. perfect matching M-unsaturated M-saturated M Contains copyrighted material from Introduction to Graph Theory by Doug West, 2nd Ed. Not for distribution beyond IIT’s Math 454/553. 3 Perfect Matchings in Complete Bipartite Graphs a 1 The perfect matchings in a complete b 2 X,Y-bigraph with |X|=|Y| exactly c 3 correspond to the bijections d 4 f: X -> Y e 5 Therefore Kn,n has n! perfect f 6 matchings. g 7 Kn,n The complete graph Kn has a perfect matching iff… Contains copyrighted material from Introduction to Graph Theory by Doug West, 2nd Ed. Not for distribution beyond IIT’s Math 454/553. 4 Perfect Matchings in Complete Graphs The complete graph Kn has a perfect matching iff n is even. So instead of Kn consider K2n. We count the perfect matchings in K2n by: (1) Selecting a vertex v (e.g., with the highest label) one choice u v (2) Selecting a vertex u to match to v K2n-2 2n-1 choices (3) Selecting a perfect matching on the rest of the vertices. -
Matchgates Revisited
THEORY OF COMPUTING, Volume 10 (7), 2014, pp. 167–197 www.theoryofcomputing.org RESEARCH SURVEY Matchgates Revisited Jin-Yi Cai∗ Aaron Gorenstein Received May 17, 2013; Revised December 17, 2013; Published August 12, 2014 Abstract: We study a collection of concepts and theorems that laid the foundation of matchgate computation. This includes the signature theory of planar matchgates, and the parallel theory of characters of not necessarily planar matchgates. Our aim is to present a unified and, whenever possible, simplified account of this challenging theory. Our results include: (1) A direct proof that the Matchgate Identities (MGI) are necessary and sufficient conditions for matchgate signatures. This proof is self-contained and does not go through the character theory. (2) A proof that the MGI already imply the Parity Condition. (3) A simplified construction of a crossover gadget. This is used in the proof of sufficiency of the MGI for matchgate signatures. This is also used to give a proof of equivalence between the signature theory and the character theory which permits omittable nodes. (4) A direct construction of matchgates realizing all matchgate-realizable symmetric signatures. ACM Classification: F.1.3, F.2.2, G.2.1, G.2.2 AMS Classification: 03D15, 05C70, 68R10 Key words and phrases: complexity theory, matchgates, Pfaffian orientation 1 Introduction Leslie Valiant introduced matchgates in a seminal paper [24]. In that paper he presented a way to encode computation via the Pfaffian and Pfaffian Sum, and showed that a non-trivial, though restricted, fragment of quantum computation can be simulated in classical polynomial time. Underlying this magic is a way to encode certain quantum states by a classical computation of perfect matchings, and to simulate certain ∗Supported by NSF CCF-0914969 and NSF CCF-1217549. -
The Geometry of Dimer Models
THE GEOMETRY OF DIMER MODELS DAVID CIMASONI Abstract. This is an expanded version of a three-hour minicourse given at the winterschool Winterbraids IV held in Dijon in February 2014. The aim of these lectures was to present some aspects of the dimer model to a geometri- cally minded audience. We spoke neither of braids nor of knots, but tried to show how several geometrical tools that we know and love (e.g. (co)homology, spin structures, real algebraic curves) can be applied to very natural problems in combinatorics and statistical physics. These lecture notes do not contain any new results, but give a (relatively original) account of the works of Kaste- leyn [14], Cimasoni-Reshetikhin [4] and Kenyon-Okounkov-Sheffield [16]. Contents Foreword 1 1. Introduction 1 2. Dimers and Pfaffians 2 3. Kasteleyn’s theorem 4 4. Homology, quadratic forms and spin structures 7 5. The partition function for general graphs 8 6. Special Harnack curves 11 7. Bipartite graphs on the torus 12 References 15 Foreword These lecture notes were originally not intended to be published, and the lectures were definitely not prepared with this aim in mind. In particular, I would like to arXiv:1409.4631v2 [math-ph] 2 Nov 2015 stress the fact that they do not contain any new results, but only an exposition of well-known results in the field. Also, I do not claim this treatement of the geometry of dimer models to be complete in any way. The reader should rather take these notes as a personal account by the author of some selected chapters where the words geometry and dimer models are not completely irrelevant, chapters chosen and organized in order for the resulting story to be almost self-contained, to have a natural beginning, and a happy ending. -
Lectures 4 and 6 Lecturer: Michel X
18.438 Advanced Combinatorial Optimization Feb 13 and 25, 2014 Lectures 4 and 6 Lecturer: Michel X. Goemans Scribe: Zhenyu Liao and Michel X. Goemans Today, we will use an algebraic approach to solve the matching problem. Our goal is to derive an algebraic test for deciding if a graph G = (V; E) has a perfect matching. We may assume that the number of vertices is even since this is a necessary condition for having a perfect matching. First, we will define a few basic needed notations. Definition 1 A skew-symmetric matrix A is a square matrix which satisfies AT = −A, i.e. if A = (aij) we have aij = −aji for all i; j. For a graph G = (V; E) with jV j = n and jEj = m, we construct a n × n skew-symmetric matrix A = (aij) with an entry aij = −aji for each edge (i; j) 2 E and aij = 0 if (i; j) is not an edge; the values aij for the edges will be specified later. Recall: Definition 2 The determinant of matrix A is n X Y det(A) = sgn(σ) aiσ(i) σ2Sn i=1 where Sn is the set of all permutations of n elements and the sgn(σ) is defined to be 1 if the number of inversions in σ is even and −1 otherwise. Note that for a skew-symmetric matrix A, det(A) = det(−AT ) = (−1)n det(A). So if n is odd we have det(A) = 0. Consider K4, the complete graph on 4 vertices, and thus 0 1 0 a12 a13 a14 B−a12 0 a23 a24C A = B C : @−a13 −a23 0 a34A −a14 −a24 −a34 0 By computing its determinant one observes that 2 det(A) = (a12a34 − a13a24 + a14a23) : First, it is the square of a polynomial q(a) in the entries of A, and moreover this polynomial has a monomial precisely for each perfect matching of K4. -
Computations in Algebraic Geometry with Macaulay 2
Computations in algebraic geometry with Macaulay 2 Editors: D. Eisenbud, D. Grayson, M. Stillman, and B. Sturmfels Preface Systems of polynomial equations arise throughout mathematics, science, and engineering. Algebraic geometry provides powerful theoretical techniques for studying the qualitative and quantitative features of their solution sets. Re- cently developed algorithms have made theoretical aspects of the subject accessible to a broad range of mathematicians and scientists. The algorith- mic approach to the subject has two principal aims: developing new tools for research within mathematics, and providing new tools for modeling and solv- ing problems that arise in the sciences and engineering. A healthy synergy emerges, as new theorems yield new algorithms and emerging applications lead to new theoretical questions. This book presents algorithmic tools for algebraic geometry and experi- mental applications of them. It also introduces a software system in which the tools have been implemented and with which the experiments can be carried out. Macaulay 2 is a computer algebra system devoted to supporting research in algebraic geometry, commutative algebra, and their applications. The reader of this book will encounter Macaulay 2 in the context of concrete applications and practical computations in algebraic geometry. The expositions of the algorithmic tools presented here are designed to serve as a useful guide for those wishing to bring such tools to bear on their own problems. A wide range of mathematical scientists should find these expositions valuable. This includes both the users of other programs similar to Macaulay 2 (for example, Singular and CoCoA) and those who are not interested in explicit machine computations at all. -
A Short Course on Matching Theory, ECNU Shanghai, July 2011
A short course on matching theory, ECNU Shanghai, July 2011. Sergey Norin LECTURE 1 Fundamental definitions and theorems. 1.1. Outline of Lecture • Definitions • Hall's theorem • Tutte's Matching theorem 1.2. Basic definitions. A matching in a graph G is a set of edges M such that no two edges share a common end. A vertex v is said to be saturated or matched by a matching M if v is an end of an edge in M. Otherwise, v is unsaturated or unmatched. The matching number ν(G) of G is the maximum number of edges in a matching in G. A matching M is perfect if every vertex of G is saturated. We will be primarily interested in perfect matchings. We will denote by M(G) the set of all perfect matchings of a graph G and by m(G) := jM(G)j the number of perfect matchings. The main goal of this course is to demonstrate classical and new results related to computing or estimating the quantity m(G). Example 1. The graph K4 is the complete graph on 4 vertices. Let V (K4) = f1; 2; 3; 4g. Then f12; 34g; f13; 24g; f14; 23g are all perfect matchings of K4, i.e. all the elements of the set M(G). We have jm(G)j = 3. Every edge of K4 belongs to exactly one perfect matching. 1 2 SERGEY NORIN, MATCHING THEORY Figure 1. A graph with no perfect matching. Computation of m(G) is of interest for the following reasons. If G is a graph representing connections between the atoms in a molecule, then m(G) encodes some stability and thermodynamic properties of the molecule. -
National and Kapodistrian University of Athens Complexity Dichotomies
National and Kapodistrian University of Athens Department of Mathematics Graduate Program in Logic and Theory of Algorithms and Computation Complexity Dichotomies for Approximations of Counting Problems Master Thesis of Andreas-Nikolas G¨obel Supervisor: Stathis Zachos Professor July 2012 2 Η παρούσα Διπλωματική Εργασία εκπονήθηκε στα πλαίσια των σπουδών για την απόκτηση του Μεταπτυχιακού Διπλώματος Ειδίκευσης στη Λογική και Θεωρία Αλγορίθμων και Υπολογισμού που απονέμει το Τμήμα Μαθηματικών του Εθνικού και Καποδιστριακού Πανεπιστημίου Αθηνών Εγκρίθηκε την 23η Ιουλίου 2012 από Εξεταστική Επιτροπή αποτελούμενη από τους: Ονοματεπώνυμο Βαθμίδα Υπογραφή 1. : Ε. Ζάχος Καθηγητής …………………… 2. : Αρ. Παγουρτζής Επίκ. Καθηγητής …………………… 3. : Δ. Φωτάκης Λέκτορας …………………… i Abstract This thesis is a survey of dichotomy theorems for computational problems, focusing in counting problems. A dichotomy theorem in computational complexity, is a complete classification of the members of a class of problems, in computationally easy and compu- tationally hard, with the set of problems of intermediate complexity being empty. Due to Ladner's theorem we cannot find a dichotomy theorem for the whole classes NP and #P, however there are large subclasses of NP (#P), that model many "natural" problems, for which dichotomy theorems exist. We continue with the decision version of constraint satisfaction problems (CSP), a class of problems in NP. for which Ladner's theorem doesn't apply. We obtain a dichotomy theorem for some special cases of CSP. We then focus on counting problems presenting the following frameworks: graph homomorphisms, counting constraint satisfaction (#CSP) and Holant problems; we provide the known dichotomies for these frameworks. In the last and main chapter of this thesis we relax the requirement of exact com- putation, and settle in approximating the problems. -
A5730107.Pdf
International OPEN ACCESS Journal Of Modern Engineering Research (IJMER) Applications of Bipartite Graph in diverse fields including cloud computing 1Arunkumar B R, 2Komala R Prof. and Head, Dept. of MCA, BMSIT, Bengaluru-560064 and Ph.D. Research supervisor, VTU RRC, Belagavi Asst. Professor, Dept. of MCA, Sir MVIT, Bengaluru and Ph.D. Research Scholar,VTU RRC, Belagavi ABSTRACT: Graph theory finds its enormous applications in various diverse fields. Its applications are evolving as it is perfect natural model and able to solve the problems in a unique way.Several disciplines even though speak about graph theory that is only in wider context. This paper pinpoints the applications of Bipartite graph in diverse field with a more points stressed on cloud computing. KEY WORDS: Graph theory, Bipartite graph cloud computing, perfect matching applications I. INTRODUCTION Graph theory has emerged as most approachable for all most problems in any field. In recent years, graph theory has emerged as one of the most sociable and fruitful methods for analyzing chemical reaction networks (CRNs). Graph theory can deal with models for which other techniques fail, for example, models where there is incomplete information about the parameters or that are of high dimension. Models with such issues are common in CRN theory [16]. Graph theory can find its applications in all most all disciplines of science, engineering, technology and including medical fields. Both in the view point of theory and practical bipartite graphs are perhaps the most basic of entities in graph theory. Until now, several graph theory structures including Bipartite graph have been considered only as a special class in some wider context in the discipline such as chemistry and computer science [1].