The Curious, First Record of Cannibalism in Ameiva Ameiva Linnaeus, 1758
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Modeling and Partitioning the Nucleotide Evolutionary Process for Phylogenetic and Comparative Genomic Inference
University of Central Florida STARS Electronic Theses and Dissertations, 2004-2019 2007 Modeling And Partitioning The Nucleotide Evolutionary Process For Phylogenetic And Comparative Genomic Inference Todd Castoe University of Central Florida Part of the Biology Commons Find similar works at: https://stars.library.ucf.edu/etd University of Central Florida Libraries http://library.ucf.edu This Doctoral Dissertation (Open Access) is brought to you for free and open access by STARS. It has been accepted for inclusion in Electronic Theses and Dissertations, 2004-2019 by an authorized administrator of STARS. For more information, please contact [email protected]. STARS Citation Castoe, Todd, "Modeling And Partitioning The Nucleotide Evolutionary Process For Phylogenetic And Comparative Genomic Inference" (2007). Electronic Theses and Dissertations, 2004-2019. 3111. https://stars.library.ucf.edu/etd/3111 MODELING AND PARTITIONING THE NUCLEOTIDE EVOLUTIONARY PROCESS FOR PHYLOGENETIC AND COMPARATIVE GENOMIC INFERENCE by TODD A. CASTOE B.S. SUNY – College of Environmental Science and Forestry, 1999 M.S. The University of Texas at Arlington, 2001 A dissertation submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy in Biomolecular Sciences in the Burnett College of Biomedical Sciences at the University of Central Florida Orlando, Florida Spring Term 2007 Major Professor: Christopher L. Parkinson © 2007 Todd A. Castoe ii ABSTRACT The transformation of genomic data into functionally relevant information about the composition of biological systems hinges critically on the field of computational genome biology, at the core of which lies comparative genomics. The aim of comparative genomics is to extract meaningful functional information from the differences and similarities observed across genomes of different organisms. -
(2007) a Photographic Field Guide to the Reptiles and Amphibians Of
A Photographic Field Guide to the Reptiles and Amphibians of Dominica, West Indies Kristen Alexander Texas A&M University Dominica Study Abroad 2007 Dr. James Woolley Dr. Robert Wharton Abstract: A photographic reference is provided to the 21 reptiles and 4 amphibians reported from the island of Dominica. Descriptions and distribution data are provided for each species observed during this study. For those species that were not captured, a brief description compiled from various sources is included. Introduction: The island of Dominica is located in the Lesser Antilles and is one of the largest Eastern Caribbean islands at 45 km long and 16 km at its widest point (Malhotra and Thorpe, 1999). It is very mountainous which results in extremely varied distribution of habitats on the island ranging from elfin forest in the highest elevations, to rainforest in the mountains, to dry forest near the coast. The greatest density of reptiles is known to occur in these dry coastal areas (Evans and James, 1997). Dominica is home to 4 amphibian species and 21 (previously 20) reptile species. Five of these are endemic to the Lesser Antilles and 4 are endemic to the island of Dominica itself (Evans and James, 1997). The addition of Anolis cristatellus to species lists of Dominica has made many guides and species lists outdated. Evans and James (1997) provides a brief description of many of the species and their habitats, but this booklet is inadequate for easy, accurate identification. Previous student projects have documented the reptiles and amphibians of Dominica (Quick, 2001), but there is no good source for students to refer to for identification of these species. -
REPTILIA: SQUAMATA: TEIIDAE AMEIVA CORVINA Ameiva Corvina
REPTILIA: SQUAMATA: TEIIDAE AMEIVACORVINA Catalogue of American Amphibians and Reptiles. Shew, J.J., E.J. Censky, and R. Powell. 2002. Ameiva corvina. Ameiva corvina Cope Sombrero Island Ameiva Ameiva corvina Cope 186 1:3 12. Type locality, "island of Som- brero." Lectotype (designated by Censky and Paulson 1992), Academy of Natural Sciences of Philadelphia (ANSP) 9 116, an adult male, collected by J.B. Hansen, date of collection not known (examined by EJC). See Remarks. CONTENT. No subspecies are recognized. DEFINITION. Ameiva corvina is a moderately sized mem- ber of the genus Ameiva (maximum SVL of males = 133 rnm, of females = 87 mm;Censky and Paulson 1992). Granular scales around the body number 139-156 (r = 147.7 f 2.4, N = 16), ventral scales 32-37 (7 = 34.1 + 0.3, N = 16), fourth toe subdigital lamellae 34-41 (F = 38.1 + 0.5, N = IS), fifteenth caudal verticil 29-38 (r = 33.3 0.6, N = 17), and femoral I I I + MAP. The arrow indicates Sombrero Island, the type locality and en- pores (both legs) 5M3(r = 57.3 0.8, N = 16)(Censky and + tire range of An~eivacorvina. Paulson 1992). See Remarks. Dorsal and lateral coloration is very dark brown to slate black and usually patternless (one individual, MCZ 6141, has a trace of a pattern with faded spots on the posterior third of the dor- sum and some balck blotches on the side of the neck). Brown color often is more distinct on the heads of males. The venter is very dark blue-gray. -
Predation on Ameiva Ameiva (Squamata: Teiidae) by Ardea Alba (Pelecaniformes: Ardeidae) in the Southwestern Brazilian Amazon
Herpetology Notes, volume 14: 1073-1075 (2021) (published online on 10 August 2021) Predation on Ameiva ameiva (Squamata: Teiidae) by Ardea alba (Pelecaniformes: Ardeidae) in the southwestern Brazilian Amazon Raul A. Pommer-Barbosa1,*, Alisson M. Albino2, Jessica F.T. Reis3, and Saara N. Fialho4 Lizards and frogs are eaten by a wide range of wetlands, being found mainly in lakes, wetlands, predators and are a food source for many bird species flooded areas, rivers, dams, mangroves, swamps, in neotropical forests (Poulin et al., 2001). However, and the shallow waters of salt lakes. It is a species predation events are poorly observed in nature and of diurnal feeding habits, but its activity peak occurs hardly documented (e.g., Malkmus, 2000; Aguiar and either at dawn or dusk. This characteristic changes Di-Bernardo, 2004; Silva et al., 2021). Such records in coastal environments, where its feeding habit is are certainly very rare for the teiid lizard Ameiva linked to the tides (McCrimmon et al., 2020). Its diet ameiva (Linnaeus, 1758) (Maffei et al., 2007). is varied and may include amphibians, snakes, insects, Found in most parts of Brazil, A. ameiva is commonly fish, aquatic larvae, mollusks, small crustaceans, small known as Amazon Racerunner or Giant Ameiva, and birds, small mammals, and lizards (Martínez-Vilalta, it has one of the widest geographical distributions 1992; Miranda and Collazo, 1997; Figueroa and among neotropical lizards. It occurs in open areas all Corales Stappung, 2003; Kushlan and Hancock 2005). over South America, the Galapagos Islands (Vanzolini We here report a predation event on the Ameiva ameiva et al., 1980), Panama, and several Caribbean islands by Ardea alba in the southwestern Brazilian Amazon. -
Viewed 100,000 of the Images for Content Before Uploading Them to Gigadb to Ensure Image Quality, Presence of Animals, Date and Temperature Stamp, and Data Integrity
Noble et al. GigaScience (2016) 5:40 DOI 10.1186/s13742-016-0145-2 DATA NOTE Open Access A picture is worth a thousand data points: an imagery dataset of paired shrub-open microsites within the Carrizo Plain National Monument Taylor J. Noble1*, Christopher J. Lortie1, Michael Westphal2 and H. Scott Butterfield3 Abstract Background: Carrizo Plain National Monument (San Joaquin Desert, California, USA) is home to many threatened and endangered species including the blunt-nosed leopard lizard (Gambelia sila). Vegetation is dominated by annual grasses, and shrubs such as Mormon tea (Ephedra californica), which is of relevance to our target species, the federally listed blunt-nosed leopard lizard, and likely also provides key ecosystem services. We used relatively nonintrusive camera traps, or trail cameras, to capture interactions between animals and these shrubs using a paired shrub-open deployment. Cameras were placed within the shrub understory and in open microhabitats at ground level to estimate animal activity and determine species presence. Findings: Twenty cameras were deployed from April 1st, 2015 to July 5th, 2015 at paired shrub-open microsites at three locations. Over 425,000 pictures were taken during this time, of which 0.4 % detected mammals, birds, insects, and reptiles including the blunt-nosed leopard lizard. Trigger rate was very high on the medium sensitivity camera setting in this desert ecosystem, and rates did not differ between microsites. Conclusions: Camera traps are an effective, less invasive survey method for collecting data on the presence or absence of desert animals in shrub and open microhabitats. A more extensive array of cameras within an arid region would thus be an effective tool to estimate the presence of desert animals and potentially detect habitat use patterns. -
Helminths from Lizards (Reptilia: Squamata) at the Cerrado of Goiás State, Brazil Author(S): Robson W
Helminths from Lizards (Reptilia: Squamata) at the Cerrado of Goiás State, Brazil Author(s): Robson W. Ávila, Manoela W. Cardoso, Fabrício H. Oda, and Reinaldo J. da Silva Source: Comparative Parasitology, 78(1):120-128. 2011. Published By: The Helminthological Society of Washington DOI: 10.1654/4472.1 URL: http://www.bioone.org/doi/full/10.1654/4472.1 BioOne (www.bioone.org) is an electronic aggregator of bioscience research content, and the online home to over 160 journals and books published by not-for-profit societies, associations, museums, institutions, and presses. Your use of this PDF, the BioOne Web site, and all posted and associated content indicates your acceptance of BioOne’s Terms of Use, available at www.bioone.org/page/terms_of_use. Usage of BioOne content is strictly limited to personal, educational, and non-commercial use. Commercial inquiries or rights and permissions requests should be directed to the individual publisher as copyright holder. BioOne sees sustainable scholarly publishing as an inherently collaborative enterprise connecting authors, nonprofit publishers, academic institutions, research libraries, and research funders in the common goal of maximizing access to critical research. Comp. Parasitol. 78(1), 2011, pp. 120–128 Helminths from Lizards (Reptilia: Squamata) at the Cerrado of Goia´s State, Brazil 1,4 2 3 1 ROBSON W. A´ VILA, MANOELA W. CARDOSO, FABRI´CIO H. ODA, AND REINALDO J. DA SILVA 1 Departamento de Parasitologia, Instituto de Biocieˆncias, UNESP, Distrito de Rubia˜o Jr., CEP 18618-000, Botucatu, SP, Brazil, 2 Departamento de Vertebrados, Museu Nacional, Universidade Federal do Rio de Janeiro, Quinta da Boa Vista, CEP 20940- 040, Rio de Janeiro, RJ, Brazil, and 3 Universidade Federal de Goia´s–UFG, Laborato´rio de Comportamento Animal, Instituto de Cieˆncias Biolo´gicas, Campus Samambaia, Conjunto Itatiaia, CEP 74000-970. -
Anfibios Y Reptiles 1 Keiner Meza-Tilvez1,2, Adolfo Mulet-Paso1,2 & Ronald Zambrano-Cantillo1 1Universidad De Cartagena & 2Fauna Silvestre Fundación
Fauna del Jardín Botánico “Guillermo Piñeres” de Cartagena, Turbaco, COLOMBIA Anfibios y Reptiles 1 Keiner Meza-Tilvez1,2, Adolfo Mulet-Paso1,2 & Ronald Zambrano-Cantillo1 1 2 Universidad de Cartagena & Fauna Silvestre Fundación Fotos: Adolfo Mulet Paso (AMP) – Hugo Claessen (HC) – Jairo H. Maldonado (JHM) – Jesús Torres Meza (JTM) – José Luis Pérez-González (JPG) – Jose Luna (JL) – Keiner Meza-Tilvez (KMT) – Luis Alberto Rueda Solano (LRS) – Mauricio Rivera Correa (MRC) – Juan Salvador Mendoza (JSM). © Jardín Botánico de Cartagena “Guillermo Piñeres” [[email protected]] Macho = (M), Hembra = (H) y Juvenil = (Juv.) [fieldguides.fieldmuseum.org] [1097] versión 1 12/2018 1 Rhinella horribilis 2 Rhinella humboldti 3 Dendrobates truncatus 4 Boana pugnax BUFONIDAE (foto KMT) BUFONIDAE (foto KMT) DENDROBATIDAE (foto KMT) HYLIDAE (foto KMT) 5 Boana xerophylla 6 Dendropsophus microcephalus 7 Scarthyla vigilans 8 Scinax rostratus HYLIDAE (foto LRS) HYLIDAE (foto KMT) HYLIDAE (foto KMT) HYLIDAE (foto KMT) 9 Scinax ruber 10 Trachycephalus typhonius 11 Engystomops pustulosus 12 Leptodactylus fragilis HYLIDAE (foto KMT) HYLIDAE (foto KMT) LEPTODACTYLIDAE (foto KMT) LEPTODACTYLIDAE (foto LRS) 13 Leptodactylus insularum 14 Pleurodema brachyops 15 Elachistocleis pearsei 16 Agalychnis callidryas LEPTODACTYLIDAE (foto AMP) LEPTODACTYLIDAE (foto KMT) MICROHYLIDAE (foto MRC) PHYLLOMEDUSIDAE (foto HC) 17 Phyllomedusa venusta 18 Basiliscus basiliscus (M) 19 Basiliscus basiliscus (Juv.) 20 Anolis auratus PHYLLOMEDUSIDAE (foto AMP) CORYTOPHANIDAE (foto KMT) CORYTOPHANIDAE (foto AMP) DACTYLOIDAE (foto AMP) Fauna del Jardín Botánico “Guillermo Piñeres” de Cartagena, Turbaco, COLOMBIA Anfibios y Reptiles 2 Keiner Meza-Tilvez1,2, Adolfo Mulet-Paso1,2 & Ronald Zambrano-Cantillo1 1 2 Universidad de Cartagena & Fauna Silvestre Fundación Fotos: Adolfo Mulet Paso (AMP) – Hugo Claessen (HC) – Jairo H. -
A New Computing Environment for Modeling Species Distribution
EXPLORATORY RESEARCH RECOGNIZED WORLDWIDE Botany, ecology, zoology, plant and animal genetics. In these and other sub-areas of Biological Sciences, Brazilian scientists contributed with results recognized worldwide. FAPESP,São Paulo Research Foundation, is one of the main Brazilian agencies for the promotion of research.The foundation supports the training of human resources and the consolidation and expansion of research in the state of São Paulo. Thematic Projects are research projects that aim at world class results, usually gathering multidisciplinary teams around a major theme. Because of their exploratory nature, the projects can have a duration of up to five years. SCIENTIFIC OPPORTUNITIES IN SÃO PAULO,BRAZIL Brazil is one of the four main emerging nations. More than ten thousand doctorate level scientists are formed yearly and the country ranks 13th in the number of scientific papers published. The State of São Paulo, with 40 million people and 34% of Brazil’s GNP responds for 52% of the science created in Brazil.The state hosts important universities like the University of São Paulo (USP) and the State University of Campinas (Unicamp), the growing São Paulo State University (UNESP), Federal University of São Paulo (UNIFESP), Federal University of ABC (ABC is a metropolitan region in São Paulo), Federal University of São Carlos, the Aeronautics Technology Institute (ITA) and the National Space Research Institute (INPE). Universities in the state of São Paulo have strong graduate programs: the University of São Paulo forms two thousand doctorates every year, the State University of Campinas forms eight hundred and the University of the State of São Paulo six hundred. -
Herp. Bulletin 100.Qxd
Opportunities and hazards affecting endemic skink Schoener, T. W. (1968) The Anolis lizards of Vitt, L. J. & Pianka, E. R. (2005). Deep history Bimini: resource partitioning in a complex impacts pr esent day ecology and biodiversity. fauna. Ecology 49, 704–726. Proc. Natl. Acad. Sci . 102, 7877–7881. Schoener, T. W. & Toft, C. A. (1983). Spider Whiting, A. S. Sites-Jr, J. W. Pellegrino, K. C. M. populations: Extraordinarily high densities on & Rodrigues, M. T. (2005). Comparing islands without top predators. Science 219, alignment methods for inferring the history of 1353–1355. the new world lizard genus Mabuya (Squamata: Silva-Jr, J. M. Péres-Jr., A. K. & Sazima, I. (2005). Scincidae). Molec. Phylogen. Evol . 38, Euprepis atlanticus (Noronha skink). Predation. 719–730. Herpetol. Rev . 36, 62–63. NATURAL HISTORY NOTES TRITURUS ALPESTRIS (Alpine newt): To record coloration after metamorphosis, all HYPOMELANISM. Various colour aberrations larvae were transported to the laboratory and then have been described in many species of caudate placed in an aquarium at 17°C. The aquarium was amphibians including Triturus newts (Dyrkacz, filled with soft water (conductivity 100 µS/cm) up 1981; Bechtel, 1995; Grossenbacher & to 5 cm, and equipped with a clump of Java moss Thiesmeier, 2003; Thiesmeier & Grossenbacher, and a piece of Styrofoam. Larvae were fed with 2004). Although the terminology is sometimes live Tubifex worms every second day. Under these confusing, the most frequently reported colour conditions all typically pigmented larvae aberrations are albinism – absence of melanin metamorphosed within one week. However, the including eyes, hypomelanism or partial albinism aberrant individual remained at the climax stage – partial absence of melanin, and leucism – without any sign of metamorphosis (i.e., tail fin lacking of all integumentary pigments except of and gill reduction) for two months after capture, eyes (Bechtel, 1995). -
FOOD HABITS of the LIZARD Ameiva Ameiva (LINNAEUS, 1758) (SAURIA: TEIIDAE) in a TROPOPHIC FOREST of SUCRE STATE, VENEZUELA
Acta Biol. Venez.Vol. 28 (2): 53-59. Junio-Diciembre, 2008 FOOD HABITS OF THE LIZARD Ameiva ameiva (LINNAEUS, 1758) (SAURIA: TEIIDAE) IN A TROPOPHIC FOREST OF SUCRE STATE, VENEZUELA. HÁBITOS ALIMENTARIOS DEL LAGARTO Ameiva ameiva (LINNAEUS, 1758) (SAURIA: TEIIDAE) EN UN BOSQUE TROPÓFILO DEL ESTADO SUCRE, VENEZUELA. Luis Alejandro González S. 1-2, Jenniffer Velásquez2, Hernán Ferrer3, James García1, Francia Cala1 and José Peñuela1 1- Departamento de Biología, Laboratorio de Ecología Animal, Universidad de Oriente, Cumaná, Venezuela. ([email protected]); 2. Posgrado de Zoología, Instituto de Zoología Tropical, Facultad de Ciencias, Universidad Central de Venezuela ([email protected]); 3. Gerencia de Investigación y Desarrollo, Jardín Botánico de Caracas, Universidad Central de Venezuela, Caracas, Venezuela ([email protected]). ABSTRACT Food habits among sexes of Ameiva ameiva were evaluated by the frequency of occurrence, trophic dominance, and diet similarity methods during periods of rain and drought in a tropophic forest in La Llanada Vieja, Sucre State, Venezuela. 431 prey items were identified in 20 stomachs analyzed. Diet for both periods showed a high frequency for Coleoptera, plant material, Isoptera, Nematoda, Araneae, and reptilian rests. Males and females showed differences in diet during the climatic periods analyzed. Females showed higher stomach volumes values than males. Results suggest the species is mainly insectivorous. RESUMEN Se evaluaron los hábitos alimentarios de Ameiva ameiva, mediante el método de frecuencia de aparición, dominancia trófica y similitud de la dieta entre sexos, abarcando los periodos de lluvia y sequía. La captura se realizó en un bosque tropófilo de los alrededores de la Llanada Vieja, estado Sucre, Venezuela. -
Literature Cited in Lizards Natural History Database
Literature Cited in Lizards Natural History database Abdala, C. S., A. S. Quinteros, and R. E. Espinoza. 2008. Two new species of Liolaemus (Iguania: Liolaemidae) from the puna of northwestern Argentina. Herpetologica 64:458-471. Abdala, C. S., D. Baldo, R. A. Juárez, and R. E. Espinoza. 2016. The first parthenogenetic pleurodont Iguanian: a new all-female Liolaemus (Squamata: Liolaemidae) from western Argentina. Copeia 104:487-497. Abdala, C. S., J. C. Acosta, M. R. Cabrera, H. J. Villaviciencio, and J. Marinero. 2009. A new Andean Liolaemus of the L. montanus series (Squamata: Iguania: Liolaemidae) from western Argentina. South American Journal of Herpetology 4:91-102. Abdala, C. S., J. L. Acosta, J. C. Acosta, B. B. Alvarez, F. Arias, L. J. Avila, . S. M. Zalba. 2012. Categorización del estado de conservación de las lagartijas y anfisbenas de la República Argentina. Cuadernos de Herpetologia 26 (Suppl. 1):215-248. Abell, A. J. 1999. Male-female spacing patterns in the lizard, Sceloporus virgatus. Amphibia-Reptilia 20:185-194. Abts, M. L. 1987. Environment and variation in life history traits of the Chuckwalla, Sauromalus obesus. Ecological Monographs 57:215-232. Achaval, F., and A. Olmos. 2003. Anfibios y reptiles del Uruguay. Montevideo, Uruguay: Facultad de Ciencias. Achaval, F., and A. Olmos. 2007. Anfibio y reptiles del Uruguay, 3rd edn. Montevideo, Uruguay: Serie Fauna 1. Ackermann, T. 2006. Schreibers Glatkopfleguan Leiocephalus schreibersii. Munich, Germany: Natur und Tier. Ackley, J. W., P. J. Muelleman, R. E. Carter, R. W. Henderson, and R. Powell. 2009. A rapid assessment of herpetofaunal diversity in variously altered habitats on Dominica. -
Mckittrick Elementary School Relocation
Reconnaissance Level Biological Evaluation For APN 497-010-94 Section 20, T30S, R27E, MDB&M Bakersfield, California October 2019 Prepared for: The Nicholson Group 2101 San Gabriel Avenue Clovis, California 93611 Prepared by: _________________________________ Steven P. Pruett, Senior Biologist McCormick Biological, Inc. P.O. Box 80983 Bakersfield, California 93380 Table of Contents EXECUTIVE SUMMARY ............................................................................................................. 4 1.0 INTRODUCTION ..................................................................................................................... 4 1.1 Purpose and Background ................................................................................................... 4 1.2 Project Site and Surrounding Area Descriptions............................................................... 5 1.3.2 Migratory Bird Treaty Act ......................................................................................... 6 1.3.3 California Fish and Game Code (C.F.G.C. § 1580 et seq.) ....................................... 6 2.0 METHODS .............................................................................................................................. 12 3.0 RESULTS ................................................................................................................................ 14 3.1 General Conditions .......................................................................................................... 14 3.2 Special-status