Towards a Natural Classification of Dothideomycetes: 8
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Patellariaceae Revisited
Mycosphere 6 (3): 290–326(2015) ISSN 2077 7019 www.mycosphere.org Article Mycosphere Copyright © 2015 Online Edition Doi 10.5943/mycosphere/6/3/7 Patellariaceae revisited Yacharoen S1,2, Tian Q1,2, Chomnunti P1,2, Boonmee S1, Chukeatirote E2, Bhat JD3 and Hyde KD1,2,4,5* 1Institute of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand 2School of Science, Mae Fah Luang University, Chiang Rai, 57100, Thailand 3Formerly at Department of Botany, Goa University, Goa 403 206, India 4Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, China 5World Agroforestry Centre, East and Central Asia, Kunming 650201, Yunnan, China Yacharoen S, Tian Q, Chomnunti P, Boonmee S, Chukeatirote E, Bhat JD, Hyde KD 2015 – Patellariaceae revisited. Mycosphere 6(3), 290–326, Doi 10.5943/mycosphere/6/3/7 Abstract The Dothideomycetes include several genera whose ascomata can be considered as apothecia and thus would be grouped as discomycetes. Most genera are grouped in the family Patellariaceae, but also Agrynnaceae and other families. The Hysteriales include genera having hysterioid ascomata and can be confused with species in Patellariaceae with discoid apothecia if the opening is wide enough. In this study, genera of the family Patellariaceae were re-examined and characterized based on morphological examination. As a result of this study the genera Baggea, Endotryblidium, Holmiella, Hysteropatella, Lecanidiella, Lirellodisca, Murangium, Patellaria, Poetschia, Rhizodiscina, Schrakia, Stratisporella and Tryblidaria are retained in the family Patellariaceae. The genera Banhegyia, Pseudoparodia and Rhytidhysteron are excluded because of differing morphology and/or molecular data. -
Phylogeny of Rock-Inhabiting Fungi Related to Dothideomycetes Ruibal, C
UvA-DARE (Digital Academic Repository) Phylogeny of rock-inhabiting fungi related to Dothideomycetes Ruibal, C.; Gueidan, C.; Selbmann, L.; Gorbushina, A.A.; Crous, P.W.; Groenewald, J.Z.; Muggia, L.; Grube, M.; Isola, D.; Schoch, C.L.; Staley, J.T.; Lutzoni, F.; de Hoog, G.S. Published in: Studies in Mycology DOI: 10.3114/sim.2009.64.06 Link to publication Citation for published version (APA): Ruibal, C., Gueidan, C., Selbmann, L., Gorbushina, A. A., Crous, P. W., Groenewald, J. Z., ... de Hoog, G. S. (2009). Phylogeny of rock-inhabiting fungi related to Dothideomycetes. Studies in Mycology, 64(1), 123-133. DOI: 10.3114/sim.2009.64.06 General rights It is not permitted to download or to forward/distribute the text or part of it without the consent of the author(s) and/or copyright holder(s), other than for strictly personal, individual use, unless the work is under an open content license (like Creative Commons). Disclaimer/Complaints regulations If you believe that digital publication of certain material infringes any of your rights or (privacy) interests, please let the Library know, stating your reasons. In case of a legitimate complaint, the Library will make the material inaccessible and/or remove it from the website. Please Ask the Library: http://uba.uva.nl/en/contact, or a letter to: Library of the University of Amsterdam, Secretariat, Singel 425, 1012 WP Amsterdam, The Netherlands. You will be contacted as soon as possible. UvA-DARE is a service provided by the library of the University of Amsterdam (http://dare.uva.nl) Download date: 16 Jun 2017 available online at www.studiesinmycology.org StudieS in Mycology 64: 123–133. -
GFS Fungal Remains from Late Neogene Deposits at the Gray
GFS Mycosphere 9(5): 1014–1024 (2018) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/9/5/5 Fungal remains from late Neogene deposits at the Gray Fossil Site, Tennessee, USA Worobiec G1, Worobiec E1 and Liu YC2 1 W. Szafer Institute of Botany, Polish Academy of Sciences, Lubicz 46, PL-31-512 Kraków, Poland 2 Department of Biological Sciences and Office of Research & Sponsored Projects, California State University, Fullerton, CA 92831, U.S.A. Worobiec G, Worobiec E, Liu YC 2018 – Fungal remains from late Neogene deposits at the Gray Fossil Site, Tennessee, USA. Mycosphere 9(5), 1014–1024, Doi 10.5943/mycosphere/9/5/5 Abstract Interesting fungal remains were encountered during palynological investigation of the Neogene deposits at the Gray Fossil Site, Washington County, Tennessee, USA. Both Cephalothecoidomyces neogenicus and Trichothyrites cf. padappakarensis are new for the Neogene of North America, while remains of cephalothecoid fungus Cephalothecoidomyces neogenicus G. Worobiec, Neumann & E. Worobiec, fragments of mantle tissue of mycorrhizal Cenococcum and sporocarp of epiphyllous Trichothyrites cf. padappakarensis (Jain & Gupta) Kalgutkar & Jansonius were reported. Remains of mantle tissue of Cenococcum for the fossil state are reported for the first time. The presence of Cephalothecoidomyces, Trichothyrites, and other fungal remains previously reported from the Gray Fossil Site suggest warm and humid palaeoclimatic conditions in the southeast USA during the late Neogene, which is in accordance with data previously obtained from other palaeontological analyses at the Gray Fossil Site. Key words – Cephalothecoid fungus – Epiphyllous fungus – Miocene/Pliocene – Mycorrhizal fungus – North America – palaeoecology – taxonomy Introduction Fungal organic remains, usually fungal spores and dispersed sporocarps, are frequently found in a routine palynological investigation (Elsik 1996). -
Based on a Newly-Discovered Species
A peer-reviewed open-access journal MycoKeys 76: 1–16 (2020) doi: 10.3897/mycokeys.76.58628 RESEARCH ARTICLE https://mycokeys.pensoft.net Launched to accelerate biodiversity research The insights into the evolutionary history of Translucidithyrium: based on a newly-discovered species Xinhao Li1, Hai-Xia Wu1, Jinchen Li1, Hang Chen1, Wei Wang1 1 International Fungal Research and Development Centre, The Research Institute of Resource Insects, Chinese Academy of Forestry, Kunming 650224, China Corresponding author: Hai-Xia Wu ([email protected], [email protected]) Academic editor: N. Wijayawardene | Received 15 September 2020 | Accepted 25 November 2020 | Published 17 December 2020 Citation: Li X, Wu H-X, Li J, Chen H, Wang W (2020) The insights into the evolutionary history of Translucidithyrium: based on a newly-discovered species. MycoKeys 76: 1–16. https://doi.org/10.3897/mycokeys.76.58628 Abstract During the field studies, aTranslucidithyrium -like taxon was collected in Xishuangbanna of Yunnan Province, during an investigation into the diversity of microfungi in the southwest of China. Morpho- logical observations and phylogenetic analysis of combined LSU and ITS sequences revealed that the new taxon is a member of the genus Translucidithyrium and it is distinct from other species. Therefore, Translucidithyrium chinense sp. nov. is introduced here. The Maximum Clade Credibility (MCC) tree from LSU rDNA of Translucidithyrium and related species indicated the divergence time of existing and new species of Translucidithyrium was crown age at 16 (4–33) Mya. Combining the estimated diver- gence time, paleoecology and plate tectonic movements with the corresponding geological time scale, we proposed a hypothesis that the speciation (estimated divergence time) of T. -
Paraphaeosphaeria Xanthorrhoeae Fungal Planet Description Sheets 253
252 Persoonia – Volume 38, 2017 Paraphaeosphaeria xanthorrhoeae Fungal Planet description sheets 253 Fungal Planet 560 – 20 June 2017 Paraphaeosphaeria xanthorrhoeae Crous, sp. nov. Etymology. Name refers to Xanthorrhoea, the plant genus from which Notes — The genus Paraconiothyrium (based on P. estuari- this fungus was collected. num) was established by Verkley et al. (2004) to accommodate Classification — Didymosphaeriaceae, Pleosporales, Dothi- several microsphaeropsis-like coelomycetes, some of which deomycetes. had proven abilities to act as biocontrol agents of other fungal pathogens. In a recent study, Verkley et al. (2014) revealed Conidiomata erumpent, globose, pycnidial, brown, 80–150 Paraconiothyrium to be paraphyletic, and separated the genus µm diam, with central ostiole; wall of 3–5 layers of brown tex- from Alloconiothyrium, Dendrothyrium, and Paraphaeosphae- tura angularis. Conidiophores reduced to conidiogenous cells. ria. Paraphaeosphaeria xanthorrhoeae resembles asexual Conidiogenous cells lining the inner cavity, hyaline, smooth, morphs of Paraphaeosphaeria, having pycnidial conidiomata ampulliform, phialidic with periclinal thickening or percurrent with percurrently proliferating conidiogenous cells and aseptate, proliferation at apex, 5–8 × 4–6 µm. Conidia solitary, golden brown, roughened conidia. Phylogenetically, it is distinct from brown, ellipsoid with obtuse ends, thick-walled, roughened, (6–) all taxa presently known to occur in the genus, the closest 7–8(–9) × (3–)3.5 µm. species on ITS being Paraphaeosphaeria sporulosa (GenBank Culture characteristics — Colonies flat, spreading, cover- JX496114; Identities = 564/585 (96 %), 4 gaps (0 %)). ing dish in 2 wk at 25 °C, surface folded, with moderate aerial mycelium and smooth margins. On MEA surface dirty white, reverse luteous. On OA surface dirty white with patches of luteous. -
Molecular Systematics of the Marine Dothideomycetes
available online at www.studiesinmycology.org StudieS in Mycology 64: 155–173. 2009. doi:10.3114/sim.2009.64.09 Molecular systematics of the marine Dothideomycetes S. Suetrong1, 2, C.L. Schoch3, J.W. Spatafora4, J. Kohlmeyer5, B. Volkmann-Kohlmeyer5, J. Sakayaroj2, S. Phongpaichit1, K. Tanaka6, K. Hirayama6 and E.B.G. Jones2* 1Department of Microbiology, Faculty of Science, Prince of Songkla University, Hat Yai, Songkhla, 90112, Thailand; 2Bioresources Technology Unit, National Center for Genetic Engineering and Biotechnology (BIOTEC), 113 Thailand Science Park, Paholyothin Road, Khlong 1, Khlong Luang, Pathum Thani, 12120, Thailand; 3National Center for Biothechnology Information, National Library of Medicine, National Institutes of Health, 45 Center Drive, MSC 6510, Bethesda, Maryland 20892-6510, U.S.A.; 4Department of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon, 97331, U.S.A.; 5Institute of Marine Sciences, University of North Carolina at Chapel Hill, Morehead City, North Carolina 28557, U.S.A.; 6Faculty of Agriculture & Life Sciences, Hirosaki University, Bunkyo-cho 3, Hirosaki, Aomori 036-8561, Japan *Correspondence: E.B. Gareth Jones, [email protected] Abstract: Phylogenetic analyses of four nuclear genes, namely the large and small subunits of the nuclear ribosomal RNA, transcription elongation factor 1-alpha and the second largest RNA polymerase II subunit, established that the ecological group of marine bitunicate ascomycetes has representatives in the orders Capnodiales, Hysteriales, Jahnulales, Mytilinidiales, Patellariales and Pleosporales. Most of the fungi sequenced were intertidal mangrove taxa and belong to members of 12 families in the Pleosporales: Aigialaceae, Didymellaceae, Leptosphaeriaceae, Lenthitheciaceae, Lophiostomataceae, Massarinaceae, Montagnulaceae, Morosphaeriaceae, Phaeosphaeriaceae, Pleosporaceae, Testudinaceae and Trematosphaeriaceae. Two new families are described: Aigialaceae and Morosphaeriaceae, and three new genera proposed: Halomassarina, Morosphaeria and Rimora. -
Pleosporomycetidae, Dothideomycetes) from a Freshwater Habitat in Thailand
Mycological Progress (2020) 19:1031–1042 https://doi.org/10.1007/s11557-020-01609-0 ORIGINAL ARTICLE Mycoenterolobium aquadictyosporium sp. nov. (Pleosporomycetidae, Dothideomycetes) from a freshwater habitat in Thailand Mark S. Calabon1,2 & Kevin D. Hyde1,3 & E. B. Gareth Jones4 & Mingkwan Doilom5,6 & Chun-Fang Liao5,6 & Saranyaphat Boonmee1,2 Received: 25 May 2020 /Revised: 25 July 2020 /Accepted: 28 July 2020 # German Mycological Society and Springer-Verlag GmbH Germany, part of Springer Nature 2020 Abstract A study of freshwater fungi in Thailand led to the discovery of Mycoenterolobium aquadictyosporium sp. nov. Evidence for the novelty and placement in Mycoenterolobium is based on comparison of morphological data. The new species differs from the type species, M. platysporum, in having shorter and wider conidia, and from M. flabelliforme in having much longer and wider conidia. The hyphomycetous genus Mycoenterolobium is similar to Cancellidium but differs in the arrangement of conidial rows of cells at the attachment point to the conidiophores. The conidia of the former are made up of rows of cells, radiating in a linear pattern from a single cell attached to the conidiophore, while in Cancellidium, adherent rows of septate branches radiate from the conidiophore. Cancellidium conidia also contain branched chains of blastic monilioid cells arising from the conidia, while these are lacking in Mycoenterolobium.AtmaturityinMycoenterolobium, the two conidial lobes unite and are closely appressed. Phylogenetic analyses based on a combined LSU, SSU, ITS, TEF1-α,andRPB2 loci sequence data support the placement of Mycoenterolobium aquadictyosporium close to the family Testudinaceae within Pleosporomycetidae, Dothideomycetes. The novel species Mycoenterolobium aquadictyosporium is described and illustrated and is compared with other morphologically similar taxa. -
An Evolving Phylogenetically Based Taxonomy of Lichens and Allied Fungi
Opuscula Philolichenum, 11: 4-10. 2012. *pdf available online 3January2012 via (http://sweetgum.nybg.org/philolichenum/) An evolving phylogenetically based taxonomy of lichens and allied fungi 1 BRENDAN P. HODKINSON ABSTRACT. – A taxonomic scheme for lichens and allied fungi that synthesizes scientific knowledge from a variety of sources is presented. The system put forth here is intended both (1) to provide a skeletal outline of the lichens and allied fungi that can be used as a provisional filing and databasing scheme by lichen herbarium/data managers and (2) to announce the online presence of an official taxonomy that will define the scope of the newly formed International Committee for the Nomenclature of Lichens and Allied Fungi (ICNLAF). The online version of the taxonomy presented here will continue to evolve along with our understanding of the organisms. Additionally, the subfamily Fissurinoideae Rivas Plata, Lücking and Lumbsch is elevated to the rank of family as Fissurinaceae. KEYWORDS. – higher-level taxonomy, lichen-forming fungi, lichenized fungi, phylogeny INTRODUCTION Traditionally, lichen herbaria have been arranged alphabetically, a scheme that stands in stark contrast to the phylogenetic scheme used by nearly all vascular plant herbaria. The justification typically given for this practice is that lichen taxonomy is too unstable to establish a reasonable system of classification. However, recent leaps forward in our understanding of the higher-level classification of fungi, driven primarily by the NSF-funded Assembling the Fungal Tree of Life (AFToL) project (Lutzoni et al. 2004), have caused the taxonomy of lichen-forming and allied fungi to increase significantly in stability. This is especially true within the class Lecanoromycetes, the main group of lichen-forming fungi (Miadlikowska et al. -
F:\Zoos'p~1\2003\Decemb~1
CATALOGUE ZOOS' PRINT JOURNAL 18(12): 1280-1285 ASTERINACEAE OF INDIA V.B. Hosagoudar Microbiology Division, Tropical Botanic Garden and Research Institute, Palode, Thiruvananthapuram, Kerala 695562, India. Abstract the genera and species are arranged alphabetically under their This paper gives an account of nine genera: Asterina, respective alphabetically arranged host families. Asterolibertia, Cirsosia, Echidnodella, Echidnodes, Lembosia, Lembosina, Prillieuxina and Trichasterina Acanthaceae and an anamorph genus Asterostomella. All these Asterina asystasiae Thite in M.S. Patil & Thite 1977. J. Shivaji Univ. Sci. 17: 152. (nom.nud.) fungal genera and their respective species are arranged On leaves of Asystasia violacea, Maharashtra. alphabetically under their alphabetically arranged host families. Asterina betonicae Hosag. & Goos 1996. Mycotaxon 59: 153. Keywords On leaves of Justicia betonica, Tamil Nadu. Asterinaceae, Asterina, Asterolibertia, Asterostomella, Cirsosia, Echidnodella, Echidnodes, Asterina justiciae Thite 1977. In: M.S. Patil & Thite, J. Shivaji Univ. Sci. 17:152 (nom. nud.) Lembosia, Lembosina, Prillieuxina and Trichasterina On leaves of Justicia simplex, Maharashtra. Asterina phlogacanthi Kar & Ghosh Introduction 1986. Indian Phytopathol. 39: 211. The first report of the genus Asterina in India dates back to On leaves of Phlogacanthus curviflorus, West Bengal. Asterina carbonacea Cooke and Asterina congesta Cooke known on coriaceous leaves and Santalum album, respectively, Asterina tertiae Racib. var. africana Doidge 1920. Trans. Royal Soc. South Africa 8: 264. from Belgaum, Karnataka (Cooke, 1984). Sir E.J. Butler in 1901 1996. Hosag., Balakr. & Goos, Mycotaxon 59: 183. has identified several collections with the help of H. Sydow 1994. Hosag.& Goos, Mycotaxon 52: 470. and P. Sydow (Sydow et al.,1911). Ryan (1928) studied some of 1996. -
<I>Lichenostigma Epirupestre</I> a New Lichenicolous Species On
MYCOTAXON Volume 107, pp. 189–195 January–March 2009 Lichenostigma epirupestre, a new lichenicolous species on Pertusaria from Spain Sergio Pérez-Ortega1 & Vicent Calatayud2 [email protected] Departamento de Biología Vegetal II, Facultad de Farmacia Universidad Complutense de Madrid Plaza Ramón y Cajal, Ciudad Universitaria, ES-28040 Madrid, SPAIN 2Fundación CEAM C/ Charles R. Darwin 14, Parc Tecnològic, E–46980 Paterna, València, Spain Abstract—The new species Lichenostigma epirupestre is described from three localities in Central Spain, growing on Pertusaria pertusa var. rupestris. Remarks on its taxonomy and closely related species are made and a key to the species of Lichenostigma subgenus Lichenostigma is also included. Key words—Iberian Peninsula, lichenicolous fungi, lichens Introduction The genus Lichenostigma was introduced for L. maureri Hafellner (Hafellner 1982) and, since then, a total of 21 species (after www.indexfungorum.org) have been referred to it. Two subgenera are recognized: Lichenostigma and Lichenogramma (Navarro-Rosinés & Hafellner 1996, Calatayud et al. 2002). Species belonging to subgenus Lichenostigma are characterized by having cushion-like ascomata and by the absence of visible vegetative hyphae or strands connecting several ascomata on the surface of the thallus. Taxa included in subgenus Lichenogramma show rounded or elongate ascomata that are interconnected by brown hyphae or pluricellular strands. While most species can easily be referred to one of these two subgenera, a few species show some intermediate features. This is the case of species in which the rounded shape of the ascomata is typical of subgenus Lichenostigma, but developing immersed (not visible on the host thallus) brown vegetative hyphae, or others that only occasionally develop superficial hyphal strands but only occasionally (Calatayud & Barreno 2003, Halıcı & Hawksworth 2007). -
Neptunomyces Aureus Gen. Et Sp. Nov
A peer-reviewed open-access journal MycoKeys 60: 31–44 (2019) Neptunomyces aureus gen. et sp. nov. isolated from algae 31 doi: 10.3897/mycokeys.60.37931 RESEARCH ARTICLE MycoKeys http://mycokeys.pensoft.net Launched to accelerate biodiversity research Neptunomyces aureus gen. et sp. nov. (Didymosphaeriaceae, Pleosporales) isolated from algae in Ria de Aveiro, Portugal Micael F.M. Gonçalves1, Tânia F.L. Vicente1, Ana C. Esteves1,2, Artur Alves1 1 Department of Biology, CESAM, University of Aveiro, 3810-193 Aveiro, Portugal 2 Universidade Católica Por- tuguesa, Institute of Health Sciences (ICS), Centre for Interdisciplinary Research in Health (CIIS), Viseu, Portugal Corresponding author: Artur Alves ([email protected]) Academic editor: Andrew Miller | Received 4 July 2019 | Accepted 23 September 2019 | Published 31 October 2019 Citation: Gonçalves MFM, Vicente TFL, Esteves AC, Alves A (2019) Neptunomyces aureus gen. et sp. nov. (Didymosphaeriaceae, Pleosporales) isolated from algae in Ria de Aveiro, Portugal. MycoKeys 60: 31–44. https://doi. org/10.3897/mycokeys.60.37931 Abstract A collection of fungi was isolated from macroalgae of the genera Gracilaria, Enteromorpha and Ulva in the estuary Ria de Aveiro in Portugal. These isolates were characterized through a multilocus phylogeny based on ITS region of the ribosomal DNA, beta-tubulin (tub2) and translation elongation factor 1 alpha (tef1-α) sequences, in conjunction with morphological and physiological data. These analyses showed that the isolates represented an unknown fungus for which a new genus, Neptunomyces gen. nov. and a new species, Neptunomyces aureus sp. nov. are proposed. Phylogenetic analyses supported the affiliation of this new taxon to the family Didymosphaeriaceae. -
BLS Bulletin 111 Winter 2012.Pdf
1 BRITISH LICHEN SOCIETY OFFICERS AND CONTACTS 2012 PRESIDENT B.P. Hilton, Beauregard, 5 Alscott Gardens, Alverdiscott, Barnstaple, Devon EX31 3QJ; e-mail [email protected] VICE-PRESIDENT J. Simkin, 41 North Road, Ponteland, Newcastle upon Tyne NE20 9UN, email [email protected] SECRETARY C. Ellis, Royal Botanic Garden, 20A Inverleith Row, Edinburgh EH3 5LR; email [email protected] TREASURER J.F. Skinner, 28 Parkanaur Avenue, Southend-on-Sea, Essex SS1 3HY, email [email protected] ASSISTANT TREASURER AND MEMBERSHIP SECRETARY H. Döring, Mycology Section, Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3AB, email [email protected] REGIONAL TREASURER (Americas) J.W. Hinds, 254 Forest Avenue, Orono, Maine 04473-3202, USA; email [email protected]. CHAIR OF THE DATA COMMITTEE D.J. Hill, Yew Tree Cottage, Yew Tree Lane, Compton Martin, Bristol BS40 6JS, email [email protected] MAPPING RECORDER AND ARCHIVIST M.R.D. Seaward, Department of Archaeological, Geographical & Environmental Sciences, University of Bradford, West Yorkshire BD7 1DP, email [email protected] DATA MANAGER J. Simkin, 41 North Road, Ponteland, Newcastle upon Tyne NE20 9UN, email [email protected] SENIOR EDITOR (LICHENOLOGIST) P.D. Crittenden, School of Life Science, The University, Nottingham NG7 2RD, email [email protected] BULLETIN EDITOR P.F. Cannon, CABI and Royal Botanic Gardens Kew; postal address Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3AB, email [email protected] CHAIR OF CONSERVATION COMMITTEE & CONSERVATION OFFICER B.W. Edwards, DERC, Library Headquarters, Colliton Park, Dorchester, Dorset DT1 1XJ, email [email protected] CHAIR OF THE EDUCATION AND PROMOTION COMMITTEE: S.