Clam Shrimp’ (Crustacea: Branchiopoda) As a Model Organism for the Study of Sexual System Evolution
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Fig. Ap. 2.1. Denton Tending His Fairy Shrimp Collection
Fig. Ap. 2.1. Denton tending his fairy shrimp collection. 176 Appendix 1 Hatching and Rearing Back in the bowels of this book we noted that However, salts may leach from soils to ultimately if one takes dry soil samples from a pool basin, make the water salty, a situation which commonly preferably at its deepest point, one can then "just turns off hatching. Tap water is usually unsatis- add water and stir". In a day or two nauplii ap- factory, either because it has high TDS, or because pear if their cysts are present. O.K., so they won't it contains chlorine or chloramine, disinfectants always appear, but you get the idea. which may inhibit hatching or kill emerging If your desire is to hatch and rear fairy nauplii. shrimps the hi-tech way, you should get some As you have read time and again in Chapter 5, guidance from Brendonck et al. (1990) and temperature is an important environmental cue for Maeda-Martinez et al. (1995c). If you merely coaxing larvae from their dormant state. You can want to see what an anostracan is like, buy some guess what temperatures might need to be ap- Artemia cysts at the local aquarium shop and fol- proximated given the sample's origin. Try incu- low directions on the container. Should you wish bation at about 3-5°C if it came from the moun- to find out what's in your favorite pool, or gather tains or high desert. If from California grass- together sufficient animals for a study of behavior lands, 10° is a good level at which to start. -
Phylogenetic Analysis of Anostracans (Branchiopoda: Anostraca) Inferred from Nuclear 18S Ribosomal DNA (18S Rdna) Sequences
MOLECULAR PHYLOGENETICS AND EVOLUTION Molecular Phylogenetics and Evolution 25 (2002) 535–544 www.academicpress.com Phylogenetic analysis of anostracans (Branchiopoda: Anostraca) inferred from nuclear 18S ribosomal DNA (18S rDNA) sequences Peter H.H. Weekers,a,* Gopal Murugan,a,1 Jacques R. Vanfleteren,a Denton Belk,b and Henri J. Dumonta a Department of Biology, Ghent University, Ledeganckstraat 35, B-9000 Ghent, Belgium b Biology Department, Our Lady of the Lake University of San Antonio, San Antonio, TX 78207, USA Received 20 February 2001; received in revised form 18 June 2002 Abstract The nuclear small subunit ribosomal DNA (18S rDNA) of 27 anostracans (Branchiopoda: Anostraca) belonging to 14 genera and eight out of nine traditionally recognized families has been sequenced and used for phylogenetic analysis. The 18S rDNA phylogeny shows that the anostracans are monophyletic. The taxa under examination form two clades of subordinal level and eight clades of family level. Two families the Polyartemiidae and Linderiellidae are suppressed and merged with the Chirocephalidae, of which together they form a subfamily. In contrast, the Parartemiinae are removed from the Branchipodidae, raised to family level (Parartemiidae) and cluster as a sister group to the Artemiidae in a clade defined here as the Artemiina (new suborder). A number of morphological traits support this new suborder. The Branchipodidae are separated into two families, the Branchipodidae and Ta- nymastigidae (new family). The relationship between Dendrocephalus and Thamnocephalus requires further study and needs the addition of Branchinella sequences to decide whether the Thamnocephalidae are monophyletic. Surprisingly, Polyartemiella hazeni and Polyartemia forcipata (‘‘Family’’ Polyartemiidae), with 17 and 19 thoracic segments and pairs of trunk limb as opposed to all other anostracans with only 11 pairs, do not cluster but are separated by Linderiella santarosae (‘‘Family’’ Linderiellidae), which has 11 pairs of trunk limbs. -
Crustacea: Branchiopoda) from the Island of Olkhon (Lake Baikal, Russia) and the Zoogeography of East Asian Spinicaudata
Jpn. J. Limnol., 60 : 585-606, 1999 A New Spinicaudatan (Crustacea: Branchiopoda) from the Island of Olkhon (Lake Baikal, Russia) and the Zoogeography of East Asian Spinicaudata Hidetoshi NAGANAWA ABSTRACT A spinicaudatan branchiopod crustacean, Baikalolkhonia tatianae gen. et sp. nov., is described from the Baikal region in Russia. The genus is assigned to the family Cyzicidae STEBBING,1910, based on the absence of a frontal organ on the head, the absence of triangular epipodal laminae on the thoracopods, and the presence of a pair of large frontal spines on the telson. The main distinguishing characteris- tic is that the epipodal upper corners of many anterior thoracopods (including even the first pair) are transformed into "sausage-like organs." Since such epipodal processes have been until now unknown in the Cyzicidae, the diagnosis of the family is emended, and 2 newly defined subfamilies, Baikalolkhoniinae and Cyzicinae, are proposed. Up to the present, 11 species belonging to 7 genera in 4 families of Spinicaudata (Cyclestheriidae, Cyzicidae, Leptestheriidae, and Lim- nadiidae) are known from the neighboring regions of East Asia, includ- ing the Russian Far East, Mongolia, China, Korea, and Japan. The list of species and the key to the species are provided. Their distribution defines 4 zoogeographical provinces, and the species diversity clearly shows a latitudinal gradient in a similar pattern to the European fauna. Key words : Baikalolkhoniinae, Lake Baikal, Spinicaudata, zoo- geography INTRODUCTION The "Large Branchiopods" of the order Spinicaudata of the freshwater fauna of Asia were partly treated by HU (1989). In total, 19 nominal species are known from China (UENO, 1927b, 1940; ZHANG et al., 1976; HU, 1985- 1993 ; SHEN and DAI, 1987 ; SHU et al., 1990), including several synonymic taxa (more details are given below in the section List of East Asian Spinicaudata). -
A Redescription of Types of the Clam Shrimp Eulimnadia Agassizii (Spinicaudata: Limnadiidae) Author(S): Douglas G. Smith Source
A Redescription of Types of the Clam Shrimp Eulimnadia agassizii (Spinicaudata: Limnadiidae) Author(s): Douglas G. Smith Source: Transactions of the American Microscopical Society, Vol. 111, No. 3 (Jul., 1992), pp. 223-228 Published by: Blackwell Publishing on behalf of American Microscopical Society Stable URL: http://www.jstor.org/stable/3226611 Accessed: 07/12/2008 13:44 Your use of the JSTOR archive indicates your acceptance of JSTOR's Terms and Conditions of Use, available at http://www.jstor.org/page/info/about/policies/terms.jsp. JSTOR's Terms and Conditions of Use provides, in part, that unless you have obtained prior permission, you may not download an entire issue of a journal or multiple copies of articles, and you may use content in the JSTOR archive only for your personal, non-commercial use. Please contact the publisher regarding any further use of this work. Publisher contact information may be obtained at http://www.jstor.org/action/showPublisher?publisherCode=black. Each copy of any part of a JSTOR transmission must contain the same copyright notice that appears on the screen or printed page of such transmission. JSTOR is a not-for-profit organization founded in 1995 to build trusted digital archives for scholarship. We work with the scholarly community to preserve their work and the materials they rely upon, and to build a common research platform that promotes the discovery and use of these resources. For more information about JSTOR, please contact [email protected]. American Microscopical Society and Blackwell Publishing are collaborating with JSTOR to digitize, preserve and extend access to Transactions of the American Microscopical Society. -
A Systematic and Experimental Analysis of Their Genes, Genomes, Mrnas and Proteins; and Perspective to Next Generation Sequencing
Crustaceana 92 (10) 1169-1205 CRUSTACEAN VITELLOGENIN: A SYSTEMATIC AND EXPERIMENTAL ANALYSIS OF THEIR GENES, GENOMES, MRNAS AND PROTEINS; AND PERSPECTIVE TO NEXT GENERATION SEQUENCING BY STEPHANIE JIMENEZ-GUTIERREZ1), CRISTIAN E. CADENA-CABALLERO2), CARLOS BARRIOS-HERNANDEZ3), RAUL PEREZ-GONZALEZ1), FRANCISCO MARTINEZ-PEREZ2,3) and LAURA R. JIMENEZ-GUTIERREZ1,5) 1) Sea Science Faculty, Sinaloa Autonomous University, Mazatlan, Sinaloa, 82000, Mexico 2) Coelomate Genomic Laboratory, Microbiology and Genetics Group, Industrial University of Santander, Bucaramanga, 680007, Colombia 3) Advanced Computing and a Large Scale Group, Industrial University of Santander, Bucaramanga, 680007, Colombia 4) Catedra-CONACYT, National Council for Science and Technology, CDMX, 03940, Mexico ABSTRACT Crustacean vitellogenesis is a process that involves Vitellin, produced via endoproteolysis of its precursor, which is designated as Vitellogenin (Vtg). The Vtg gene, mRNA and protein regulation involve several environmental factors and physiological processes, including gonadal maturation and moult stages, among others. Once the Vtg gene, mRNAs and protein are obtained, it is possible to establish the relationship between the elements that participate in their regulation, which could either be species-specific, or tissue-specific. This work is a systematic analysis that compares the similarities and differences of Vtg genes, mRNA and Vtg between the crustacean species reported in databases with respect to that obtained from the transcriptome of Callinectes arcuatus, C. toxotes, Penaeus stylirostris and P. vannamei obtained with MiSeq sequencing technology from Illumina. Those analyses confirm that the Vtg obtained from selected species will serve to understand the process of vitellogenesis in crustaceans that is important for fisheries and aquaculture. RESUMEN La vitelogénesis de los crustáceos es un proceso que involucra la vitelina, producida a través de la endoproteólisis de su precursor llamado Vitelogenina (Vtg). -
Wonderful Wacky Water Critters
Wonderful, Wacky, Water Critters WONDERFUL WACKY WATER CRITTERS HOW TO USE THIS BOOK 1. The “KEY TO MACROINVERTEBRATE LIFE IN THE RIVER” or “KEY TO LIFE IN THE POND” identification sheets will help you ‘unlock’ the name of your animal. 2. Look up the animal’s name in the index in the back of this book and turn to the appropriate page. 3. Try to find out: a. What your animal eats. b. What tools it has to get food. c. How it is adapted to the water current or how it gets oxygen. d. How it protects itself. 4. Draw your animal’s adaptations in the circles on your adaptation worksheet on the following page. GWQ023 Wonderful Wacky Water Critters DNR: WT-513-98 This publication is available from county UW-Extension offices or from Extension Publications, 45 N. Charter St., Madison, WI 53715. (608) 262-3346, or toll-free 877-947-7827 Lead author: Suzanne Wade, University of Wisconsin–Extension Contributing scientists: Phil Emmling, Stan Nichols, Kris Stepenuck (University of Wisconsin–Extension) and Mike Miller, Mike Sorge (Wisconsin Department of Natural Resources) Adapted with permission from a booklet originally published by Riveredge Nature Center, Newburg, WI, Phone 414/675-6888 Printed on Recycled Paper Illustrations by Carolyn Pochert and Lynne Bergschultz Page 1 CRITTER ADAPTATION CHART How does it get its food? How does it get away What is its food? from enemies? Draw your “critter” here NAME OF “CRITTER” How does it get oxygen? Other unique adaptations. Page 2 TWO COMMON LIFE CYCLES: WHICH METHOD OF GROWING UP DOES YOUR ANIMAL HAVE? egg larva adult larva - older (mayfly) WITHOUT A PUPAL STAGE? THESE ANIMALS GROW GRADUALLY, CHANGING ONLY SLIGHTLY AS THEY GROW UP. -
Petrified Forest U.S
National Park Service Petrified Forest U.S. Department of the Interior Petrified Forest National Park Petrified Forest, Arizona Triassic Dinosaurs and Other Animals Fossils are clues to the past, allowing researchers to reconstruct ancient environments. During the Late Triassic, the climate was very different from that of today. Located near the equator, this region was humid and tropical, the landscape dominated by a huge river system. Giant reptiles and amphibians, early dinosaurs, fish, and many invertebrates lived among the dense vegetation and in the winding waterways. New fossils come to light as paleontologists continue to study the Triassic treasure trove of Petrified Forest National Park. Invertebrates Scattered throughout the sedimentary species forming vast colonies in the layers of the Chinle Formation are fossils muddy beds of the ancient lakes and of many types of invertebrates. Trace rivers. Antediplodon thomasi is one of the fossils include insect nests, termite clam fossils found in the park. galleries, and beetle borings in the petrified logs. Thin slabs of shale have preserved Horseshoe crabs more delicate animals such as shrimp, Horseshoe crabs have been identified by crayfish, and insects, including the wing of their fossilized tracks (Kouphichnium a cockroach! arizonae), originally left in the soft sediments at the bottom of fresh water Clams lakes and streams. These invertebrates Various freshwater bivalves have been probably ate worms, soft mollusks, plants, found in the Chinle Formation, some and dead fish. Freshwater Fish The freshwater streams and rivers of the (pictured). This large lobe-finned fish Triassic landscape were home to numerous could reach up to 5 feet (1.5 m) long and species of fish. -
Crustaceans Body Only Was ~2’ Long, Claw Was an Additional 20”
Crustaceans body only was ~2’ long, claw was an additional 20” =shelled creatures; “the insects of the sea” ! ~ 4’ long total some crustaceans are quite colorful; blue, red, ~67,000 species orange, yellow eg: lobsters, crayfish, shrimp, crabs, water fleas, many are bioluminescent copepods, barnacles, pill bugs, etc A. crustaceans are mostly aquatic, the great majority vary in size from microscopic (<0.1 mm) to 12’ are marine some crustaceans live for several decades; some inhabit most waters of the earth: ocean , arctic , freshwaters, molt throughout life high mountain creeks and lakes thermal springs, brine waters so continuous increase in size 1. many are benthic eg. crayfish & freshwater shrimp eg. especially the larger crustaceans; shrimp and crabs largest crustaceans in freshwaters eg. also isopods, amphipods some up to 2’ and weigh 9 lbs e. Ostracoda (=seed shrimp) a river shrimp, Macrobrachium jamaicense, was collected from Devils River, Tx: body was 10.5” common in freshwater and marine habitats long, 3’ long including antennae, 3 lbs mainly benthic animals that inhabit all types of eg largest (longest) is giant Japanese crab substrates in standing and running water ! up to 12’ from end of claws to tail and a weight of a few actively swim just above the substrate 40 lbs (20 kg) generally use their antennae to move Lobsters may be the longest lived Crustaceans enclosed in bivalve carapace that completely covers one was collected that weighed 35 lbs the entire animal was estimated to be 50 yrs old; Animals: Arthropoda - Crustacea; -
Keys to the Australian Clam Shrimps (Crustacea: Branchiopoda: Laevicaudata, Spinicaudata, Cyclestherida)
Museum Victoria Science Reports 20: 1-25 (2018) ISSN 1833-0290 https://museumsvictoria.com.au/collections-research/journals/museum-victoria-science-reports/ https://doi.org/10.24199/j.mvsr.2018.20 Keys to the Australian clam shrimps (Crustacea: Branchiopoda: Laevicaudata, Spinicaudata, Cyclestherida) Brian V. Timms Honorary Research Associate, Australian Museum, 1 William Street, Sydney 2001; and Centre for Ecosystem Science, School of Biology, Earth and Environmental Sciences, University of New South Wales, Kensington, NSW 2052 Brian V. Timms. 2018. Keys to the Australian clam shrimps (Crustacea: Branchiopoda: Laevicau- data, Spinicaudata, Cyclestherida). Museum Victoria Science Reports 20: 1-25. Abstract The morphology and systematics of clam shrimps is described followed by a key to genera. Each genus is treated, including diagnostic features, list of species with distributions, and references provided to papers with keys or if these are not available preliminary keys to species within that genus are included. Keywords gnammas, freshwater, crustaceans, morphology Figure 1: Limnadopsis birchii – Worlds largest clam shrimp. Keys to the Australian clam shrimps Introduction Australia has a diverse clam shrimp fauna with about 78 species in nine genera recognised in 2017 (Rogers et al., 2012; Timms, 2012, 2013; Schwentner et al., 2012a,b, 2013a,b, 2015b,a; Timms & Schwentner, 2017; Tippelt & Schwent- ner, 2018) . This is an explosion from 26 species in 2008 (Richter & Timms, 2005; Brendonck et al., 2008) when Australia‘s proportion of the world fauna was about 15%; now it is about 30%. It is anticipated another five species will be described before 2020. There have been two periods of active re- search on Australian clam shrimps, the first Figure 2: Number of known species of Aus- from 1855 to 1927 with a peak around the turn tralian clam shrimps over time. -
Crustacean Phylogeny…? Nauplius • First Larva Stage of Most “It Can Be Concluded That Crustacean Crustaceans
Bio 370 Crustacea Main arthropod clades (Regier et al 2010) Phylum Arthropoda http://blogs.discoverm • Trilobita agazine.com/loom/201 0/02/10/blind-cousins- Subphylum (or Class) Crustacea to-the-arthropod- • Chelicerata superstars/ Mostly aquatic, with calcified exoskeleton. • Mandibulata – Myriapoda (Chilopoda, Diplopoda) Head derived from acron plus next five segments- so primitively has 5 pairs of appendages: – Pancrustacea • Oligostraca (Ostracoda, Branchiura) -2 pair antennae • Altocrustacea - 1 pair of jaws – Vericrustacea - 2 pair of maxillae » (Branchiopoda, Decapoda) - usually a median (cyclopean) eye and – Miracrustacea one pair of compound eyes » Xenocarida (Remipedia, Cephalocarida) » Hexapoda Tagmosis of trunk varies in different taxa Crustacean phylogeny…? Nauplius • first larva stage of most “It can be concluded that crustacean crustaceans. phylogeny remains essentially unresolved. • three pairs of appendages • single median (naupliar) eye Conflict is rife, irrespective of whether one compares different morphological studies, molecular studies, or both.” Appendages: Jenner, 2010: Arthropod Structure & Development 39:143– -1st antennae 153 -2nd antennae - mandibles 1 Bio 370 Crustacea Crustacean taxa you should know Remipede habitat: a sea cave “blue hole” on Andros Island. Seven species are found in the Bahamas. Class Remipedia Class Malacostraca Class Branchiopoda “Peracarida”-marsupial crustacea Notostraca –tadpole shrimp Isopoda- isopods Anostraca-fairy shrimp Amphipoda- amphipods Cladocera- water fleas Mysidacea- mysids Conchostraca- clam shrimp “Eucarida” Class Maxillopoda Euphausiacea- krill Ostracoda- ostracods Decapoda- decapods- ten leggers Copepoda- copepods Branchiura- fish lice Penaeoidea- penaeid shrimp Cirripedia- barnacles Caridea- carid shrimp Astacidea- crayfish & lobsters Brachyura- true crabs Anomura- false crabs “Stomatopoda”– mantis shrimps Class Remipedia Remipides found only in sea caves in the Caribbean, the Canary Islands, and Western Australia (see pink below). -
Fossil Calibrations for the Arthropod Tree of Life
bioRxiv preprint doi: https://doi.org/10.1101/044859; this version posted June 10, 2016. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. FOSSIL CALIBRATIONS FOR THE ARTHROPOD TREE OF LIFE AUTHORS Joanna M. Wolfe1*, Allison C. Daley2,3, David A. Legg3, Gregory D. Edgecombe4 1 Department of Earth, Atmospheric & Planetary Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA 2 Department of Zoology, University of Oxford, South Parks Road, Oxford OX1 3PS, UK 3 Oxford University Museum of Natural History, Parks Road, Oxford OX1 3PZ, UK 4 Department of Earth Sciences, The Natural History Museum, Cromwell Road, London SW7 5BD, UK *Corresponding author: [email protected] ABSTRACT Fossil age data and molecular sequences are increasingly combined to establish a timescale for the Tree of Life. Arthropods, as the most species-rich and morphologically disparate animal phylum, have received substantial attention, particularly with regard to questions such as the timing of habitat shifts (e.g. terrestrialisation), genome evolution (e.g. gene family duplication and functional evolution), origins of novel characters and behaviours (e.g. wings and flight, venom, silk), biogeography, rate of diversification (e.g. Cambrian explosion, insect coevolution with angiosperms, evolution of crab body plans), and the evolution of arthropod microbiomes. We present herein a series of rigorously vetted calibration fossils for arthropod evolutionary history, taking into account recently published guidelines for best practice in fossil calibration. -
Artemia Franciscana C
1 Artemia franciscana C. Drewes (updated, 2002) http://www.zool.iastate.edu/~c_drewes/ http://www.zool.iastate.edu/~c_drewes/Artemph.jpg Taxonomy Phylum: Arthropoda Subphylum): Crustacea Class: Branchiopoda (includes fairy shrimp, brine shrimp, daphnia, clam shrimp, tadpole shrimp) Order: Anostraca (brine shrimp and fairy shrimp) Genus and species: Artemia franciscana (= the North American version of Artemia salina) [Note: The species commonly referred to as “Artemia salina” in much research and educational literature appears, in fact, to consist of several closely related species or subspecies. One of these, Artemia franciscana, is the main North American species.] Reproduction Typically, sexes are separate and adults are sexually dimorphic. Males have large graspers (modified second antennae) which easily distinguish them from females. In some species and populations of Artemia (for example, Europe), males may be rare and females reproduce by parthenogenesis. During mating, males deposit sperm in the female ovisac where eggs are fertilized and covered with a shell. Eggs are then deposited and stored in a brood sac near the posterior end of the thorax (Figure 1M). Once fertilized, eggs quickly undergo cleavage and development through the gastrula stage (Figure 1A-E). After one or a few days, eggs are then released by the female (oviposition). Multiple batches of eggs may be released at intervals of every few days by the same female. Two types of eggs may be laid -- (1) thin-shelled “summer eggs” that continue developing and hatch quickly, or (2) thick-shelled, brown “winter eggs” in which development is arrested at about early gastrula stage. Such “winter eggs,” in their dried and encysted form, survive in a metabolically inactive state (termed anabiosis) for up to 10 or more years while still retaining the ability to survive severe environmental conditions.