North Pacific Capsosiphon Groenlandicus, Ulotrichaceae, Chlorophyta)
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Asexual Life History by Biflagellate Zoids In
Aquatic Botany 91 (2009) 213–218 Contents lists available at ScienceDirect Aquatic Botany journal homepage: www.elsevier.com/locate/aquabot Asexual life history by biflagellate zoids in Monostroma latissimum (Ulotrichales) Felix Bast a,*, Satoshi Shimada b, Masanori Hiraoka a, Kazuo Okuda a a Graduate School of Kuroshio Science, Kochi University, 2-5-1 Akebono, Kochi 780-8520, Japan b Graduate School of Humanities and Sciences, Ochanomizu University, Tokyo 112-8610, Japan ARTICLE INFO ABSTRACT Article history: Monostroma latissimum (Kuetzing) Wittrock is a monostromatic green alga of commercial importance in Received 16 December 2008 Japan. Here we report the serendipitous discovery of asexually reproducing specimens collected from Received in revised form 26 May 2009 Usa, on the Pacific coast of Kochi Prefecture, south-western Japan. Zoids were found to be biflagellate and Accepted 24 June 2009 negatively phototactic. Germination of settled zoids was observed to follow erect-filamentous ontogeny Available online 1 July 2009 similar to that of the previously reported sexual strain. Moreover, the newly discovered asexual strain had identical sequences of nuclear encoded ITS (Internal Transcribed Spacer) region to that of the sexual Keywords: strain. On the basis of this finding, we postulate that the ITS sequences may have been maintained in Internal Transcribed Spacer these conspecific strains despite the evolution in sexuality. Relationships were investigated among M. Life history Phylogeny latissimum and other monostromatic taxa within the -
A Close-Up View on ITS2 Evolution and Speciation
Caisová et al. BMC Evolutionary Biology 2011, 11:262 http://www.biomedcentral.com/1471-2148/11/262 RESEARCH ARTICLE Open Access A close-up view on ITS2 evolution and speciation - a case study in the Ulvophyceae (Chlorophyta, Viridiplantae) Lenka Caisová1,2,3*†, Birger Marin1† and Michael Melkonian1 Abstract Background: The second Internal Transcriber Spacer (ITS2) is a fast evolving part of the nuclear-encoded rRNA operon located between the 5.8S and 28S rRNA genes. Based on crossing experiments it has been proposed that even a single Compensatory Base Change (CBC) in helices 2 and 3 of the ITS2 indicates sexual incompatibility and thus separates biological species. Taxa without any CBC in these ITS2 regions were designated as a ‘CBC clade’. However, in depth comparative analyses of ITS2 secondary structures, ITS2 phylogeny, the origin of CBCs, and their relationship to biological species have rarely been performed. To gain ‘close-up’ insights into ITS2 evolution, (1) 86 sequences of ITS2 including secondary structures have been investigated in the green algal order Ulvales (Chlorophyta, Viridiplantae), (2) after recording all existing substitutions, CBCs and hemi-CBCs (hCBCs) were mapped upon the ITS2 phylogeny, rather than merely comparing ITS2 characters among pairs of taxa, and (3) the relation between CBCs, hCBCs, CBC clades, and the taxonomic level of organisms was investigated in detail. Results: High sequence and length conservation allowed the generation of an ITS2 consensus secondary structure, and introduction of a novel numbering system of ITS2 nucleotides and base pairs. Alignments and analyses were based on this structural information, leading to the following results: (1) in the Ulvales, the presence of a CBC is not linked to any particular taxonomic level, (2) most CBC ‘clades’ sensu Coleman are paraphyletic, and should rather be termed CBC grades. -
Neoproterozoic Origin and Multiple Transitions to Macroscopic Growth in Green Seaweeds
Neoproterozoic origin and multiple transitions to macroscopic growth in green seaweeds Andrea Del Cortonaa,b,c,d,1, Christopher J. Jacksone, François Bucchinib,c, Michiel Van Belb,c, Sofie D’hondta, f g h i,j,k e Pavel Skaloud , Charles F. Delwiche , Andrew H. Knoll , John A. Raven , Heroen Verbruggen , Klaas Vandepoeleb,c,d,1,2, Olivier De Clercka,1,2, and Frederik Leliaerta,l,1,2 aDepartment of Biology, Phycology Research Group, Ghent University, 9000 Ghent, Belgium; bDepartment of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Zwijnaarde, Belgium; cVlaams Instituut voor Biotechnologie Center for Plant Systems Biology, 9052 Zwijnaarde, Belgium; dBioinformatics Institute Ghent, Ghent University, 9052 Zwijnaarde, Belgium; eSchool of Biosciences, University of Melbourne, Melbourne, VIC 3010, Australia; fDepartment of Botany, Faculty of Science, Charles University, CZ-12800 Prague 2, Czech Republic; gDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD 20742; hDepartment of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138; iDivision of Plant Sciences, University of Dundee at the James Hutton Institute, Dundee DD2 5DA, United Kingdom; jSchool of Biological Sciences, University of Western Australia, WA 6009, Australia; kClimate Change Cluster, University of Technology, Ultimo, NSW 2006, Australia; and lMeise Botanic Garden, 1860 Meise, Belgium Edited by Pamela S. Soltis, University of Florida, Gainesville, FL, and approved December 13, 2019 (received for review June 11, 2019) The Neoproterozoic Era records the transition from a largely clear interpretation of how many times and when green seaweeds bacterial to a predominantly eukaryotic phototrophic world, creat- emerged from unicellular ancestors (8). ing the foundation for the complex benthic ecosystems that have There is general consensus that an early split in the evolution sustained Metazoa from the Ediacaran Period onward. -
DNA Barcoding of the German Green Supralittoral Zone Indicates the Distribution and Phenotypic Plasticity of Blidingia Species and Reveals Blidingia Cornuta Sp
TAXON 70 (2) • April 2021: 229–245 Steinhagen & al. • DNA barcoding of German Blidingia species SYSTEMATICS AND PHYLOGENY DNA barcoding of the German green supralittoral zone indicates the distribution and phenotypic plasticity of Blidingia species and reveals Blidingia cornuta sp. nov. Sophie Steinhagen,1,2 Luisa Düsedau1 & Florian Weinberger1 1 GEOMAR Helmholtz Centre for Ocean Research Kiel, Marine Ecology Department, Düsternbrooker Weg 20, 24105 Kiel, Germany 2 Department of Marine Sciences-Tjärnö, University of Gothenburg, 452 96 Strömstad, Sweden Address for correspondence: Sophie Steinhagen, [email protected] DOI https://doi.org/10.1002/tax.12445 Abstract In temperate and subarctic regions of the Northern Hemisphere, green algae of the genus Blidingia are a substantial and environment-shaping component of the upper and mid-supralittoral zones. However, taxonomic knowledge on these important green algae is still sparse. In the present study, the molecular diversity and distribution of Blidingia species in the German State of Schleswig-Holstein was examined for the first time, including Baltic Sea and Wadden Sea coasts and the off-shore island of Helgo- land (Heligoland). In total, three entities were delimited by DNA barcoding, and their respective distributions were verified (in decreasing order of abundance: Blidingia marginata, Blidingia cornuta sp. nov. and Blidingia minima). Our molecular data revealed strong taxonomic discrepancies with historical species concepts, which were mainly based on morphological and ontogenetic char- acters. Using a combination of molecular, morphological and ontogenetic approaches, we were able to disentangle previous mis- identifications of B. minima and demonstrate that the distribution of B. minima is more restricted than expected within the examined area. -
Marine Macroalgal Biodiversity of Northern Madagascar: Morpho‑Genetic Systematics and Implications of Anthropic Impacts for Conservation
Biodiversity and Conservation https://doi.org/10.1007/s10531-021-02156-0 ORIGINAL PAPER Marine macroalgal biodiversity of northern Madagascar: morpho‑genetic systematics and implications of anthropic impacts for conservation Christophe Vieira1,2 · Antoine De Ramon N’Yeurt3 · Faravavy A. Rasoamanendrika4 · Sofe D’Hondt2 · Lan‑Anh Thi Tran2,5 · Didier Van den Spiegel6 · Hiroshi Kawai1 · Olivier De Clerck2 Received: 24 September 2020 / Revised: 29 January 2021 / Accepted: 9 March 2021 © The Author(s), under exclusive licence to Springer Nature B.V. 2021 Abstract A foristic survey of the marine algal biodiversity of Antsiranana Bay, northern Madagas- car, was conducted during November 2018. This represents the frst inventory encompass- ing the three major macroalgal classes (Phaeophyceae, Florideophyceae and Ulvophyceae) for the little-known Malagasy marine fora. Combining morphological and DNA-based approaches, we report from our collection a total of 110 species from northern Madagas- car, including 30 species of Phaeophyceae, 50 Florideophyceae and 30 Ulvophyceae. Bar- coding of the chloroplast-encoded rbcL gene was used for the three algal classes, in addi- tion to tufA for the Ulvophyceae. This study signifcantly increases our knowledge of the Malagasy marine biodiversity while augmenting the rbcL and tufA algal reference libraries for DNA barcoding. These eforts resulted in a total of 72 new species records for Mada- gascar. Combining our own data with the literature, we also provide an updated catalogue of 442 taxa of marine benthic -
Uncovering Unique Green Algae and Cyanobacteria Isolated from Biocrusts in Highly Saline Potash Tailing Pile Habitats, Using an Integrative Approach
microorganisms Article Uncovering Unique Green Algae and Cyanobacteria Isolated from Biocrusts in Highly Saline Potash Tailing Pile Habitats, Using an Integrative Approach Veronika Sommer 1,2, Tatiana Mikhailyuk 3, Karin Glaser 1 and Ulf Karsten 1,* 1 Institute for Biological Sciences, Applied Ecology and Phycology, University of Rostock, 18059 Rostock, Germany; [email protected] (V.S.); [email protected] (K.G.) 2 upi UmweltProjekt Ingenieursgesellschaft mbH, 39576 Stendal, Germany 3 National Academy of Sciences of Ukraine, M.G. Kholodny Institute of Botany, 01601 Kyiv, Ukraine; [email protected] * Correspondence: [email protected] Received: 4 September 2020; Accepted: 22 October 2020; Published: 27 October 2020 Abstract: Potash tailing piles caused by fertilizer production shape their surroundings because of the associated salt impact. A previous study in these environments addressed the functional community “biocrust” comprising various micro- and macro-organisms inhabiting the soil surface. In that previous study, biocrust microalgae and cyanobacteria were isolated and morphologically identified amongst an ecological discussion. However, morphological species identification maybe is difficult because of phenotypic plasticity, which might lead to misidentifications. The present study revisited the earlier species list using an integrative approach, including molecular methods. Seventy-six strains were sequenced using the markers small subunit (SSU) rRNA gene and internal transcribed spacer (ITS). Phylogenetic analyses confirmed some morphologically identified species. However, several other strains could only be identified at the genus level. This indicates a high proportion of possibly unknown taxa, underlined by the low congruence of the previous morphological identifications to our results. In general, the integrative approach resulted in more precise species identifications and should be considered as an extension of the previous morphological species list. -
Lateral Gene Transfer of Anion-Conducting Channelrhodopsins Between Green Algae and Giant Viruses
bioRxiv preprint doi: https://doi.org/10.1101/2020.04.15.042127; this version posted April 23, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 5 Lateral gene transfer of anion-conducting channelrhodopsins between green algae and giant viruses Andrey Rozenberg 1,5, Johannes Oppermann 2,5, Jonas Wietek 2,3, Rodrigo Gaston Fernandez Lahore 2, Ruth-Anne Sandaa 4, Gunnar Bratbak 4, Peter Hegemann 2,6, and Oded 10 Béjà 1,6 1Faculty of Biology, Technion - Israel Institute of Technology, Haifa 32000, Israel. 2Institute for Biology, Experimental Biophysics, Humboldt-Universität zu Berlin, Invalidenstraße 42, Berlin 10115, Germany. 3Present address: Department of Neurobiology, Weizmann 15 Institute of Science, Rehovot 7610001, Israel. 4Department of Biological Sciences, University of Bergen, N-5020 Bergen, Norway. 5These authors contributed equally: Andrey Rozenberg, Johannes Oppermann. 6These authors jointly supervised this work: Peter Hegemann, Oded Béjà. e-mail: [email protected] ; [email protected] 20 ABSTRACT Channelrhodopsins (ChRs) are algal light-gated ion channels widely used as optogenetic tools for manipulating neuronal activity 1,2. Four ChR families are currently known. Green algal 3–5 and cryptophyte 6 cation-conducting ChRs (CCRs), cryptophyte anion-conducting ChRs (ACRs) 7, and the MerMAID ChRs 8. Here we 25 report the discovery of a new family of phylogenetically distinct ChRs encoded by marine giant viruses and acquired from their unicellular green algal prasinophyte hosts. -
2004 University of Connecticut Storrs, CT
Welcome Note and Information from the Co-Conveners We hope you will enjoy the NEAS 2004 meeting at the scenic Avery Point Campus of the University of Connecticut in Groton, CT. The last time that we assembled at The University of Connecticut was during the formative years of NEAS (12th Northeast Algal Symposium in 1973). Both NEAS and The University have come along way. These meetings will offer oral and poster presentations by students and faculty on a wide variety of phycological topics, as well as student poster and paper awards. We extend a warm welcome to all of our student members. The Executive Committee of NEAS has extended dormitory lodging at Project Oceanology gratis to all student members of the Society. We believe this shows NEAS members’ pride in and our commitment to our student members. This year we will be honoring Professor Arthur C. Mathieson as the Honorary Chair of the 43rd Northeast Algal Symposium. Art arrived with his wife, Myla, at the University of New Hampshire in 1965 from California. Art is a Professor of Botany and a Faculty in Residence at the Jackson Estuarine Laboratory of the University of New Hampshire. He received his Bachelor of Science and Master’s Degrees at the University of California, Los Angeles. In 1965 he received his doctoral degree from the University of British Columbia, Vancouver, Canada. Over a 43-year career Art has supervised many undergraduate and graduate students studying the ecology, systematics and mariculture of benthic marine algae. He has been an aquanaut-scientist for the Tektite II and also for the FLARE submersible programs. -
SPECIAL PUBLICATION 6 the Effects of Marine Debris Caused by the Great Japan Tsunami of 2011
PICES SPECIAL PUBLICATION 6 The Effects of Marine Debris Caused by the Great Japan Tsunami of 2011 Editors: Cathryn Clarke Murray, Thomas W. Therriault, Hideaki Maki, and Nancy Wallace Authors: Stephen Ambagis, Rebecca Barnard, Alexander Bychkov, Deborah A. Carlton, James T. Carlton, Miguel Castrence, Andrew Chang, John W. Chapman, Anne Chung, Kristine Davidson, Ruth DiMaria, Jonathan B. Geller, Reva Gillman, Jan Hafner, Gayle I. Hansen, Takeaki Hanyuda, Stacey Havard, Hirofumi Hinata, Vanessa Hodes, Atsuhiko Isobe, Shin’ichiro Kako, Masafumi Kamachi, Tomoya Kataoka, Hisatsugu Kato, Hiroshi Kawai, Erica Keppel, Kristen Larson, Lauran Liggan, Sandra Lindstrom, Sherry Lippiatt, Katrina Lohan, Amy MacFadyen, Hideaki Maki, Michelle Marraffini, Nikolai Maximenko, Megan I. McCuller, Amber Meadows, Jessica A. Miller, Kirsten Moy, Cathryn Clarke Murray, Brian Neilson, Jocelyn C. Nelson, Katherine Newcomer, Michio Otani, Gregory M. Ruiz, Danielle Scriven, Brian P. Steves, Thomas W. Therriault, Brianna Tracy, Nancy C. Treneman, Nancy Wallace, and Taichi Yonezawa. Technical Editor: Rosalie Rutka Please cite this publication as: The views expressed in this volume are those of the participating scientists. Contributions were edited for Clarke Murray, C., Therriault, T.W., Maki, H., and Wallace, N. brevity, relevance, language, and style and any errors that [Eds.] 2019. The Effects of Marine Debris Caused by the were introduced were done so inadvertently. Great Japan Tsunami of 2011, PICES Special Publication 6, 278 pp. Published by: Project Designer: North Pacific Marine Science Organization (PICES) Lori Waters, Waters Biomedical Communications c/o Institute of Ocean Sciences Victoria, BC, Canada P.O. Box 6000, Sidney, BC, Canada V8L 4B2 Feedback: www.pices.int Comments on this volume are welcome and can be sent This publication is based on a report submitted to the via email to: [email protected] Ministry of the Environment, Government of Japan, in June 2017. -
Benthic Marine Algae on Japanese Tsunami Marine Debris – a Morphological Documentation of the Species
Benthic Marine Algae on Japanese Tsunami Marine Debris – a morphological documentation of the species Gayle I. Hansen ([email protected]), Oregon State University, USA With DNA determinations by Takeaki Hanyuda ([email protected]) & Hiroshi Kawai ([email protected]), Kobe University, Japan Copyright: 2017, CC BY-NC (attribution, non-commercial use). For photographs, please credit G.I. Hansen or those noted on the pictures. Printing: For better pdf printing, please reduce to letter (11” x 8.5”) size, landscape orientation. Citations to be used for this series: Hansen, G.I., Hanyuda, T. & Kawai, H. (2017). Benthic marine algae on Japanese tsunami marine debris – a morphological documentation of the species. Part 1 – The tsunami event, the project overview, and the red algae. OSU Scholars Archive, Corvallis, pp. 1-50. http://dx.doi.org/10.5399/osu/1110 Hansen, G.I., Hanyuda, T. & Kawai, H. (2017). Benthic marine algae on Japanese tsunami marine debris – a morphological documentation of the species. Part 2. The brown algae. OSU Scholars Archive, Corvallis, pp. 1-61. http://dx.doi.org/10.5399/osu/1111 Hansen, G.I., Hanyuda, T. & Kawai, H. (2017). Benthic marine algae on Japanese tsunami marine debris – a morphological documentation of the species. Part 3. The green algae and cyanobacteria. OSU Scholars Archive, Corvallis. pp. 1-43. http://dx.doi.org/10.5399/osu/1112 Other publications supported: The Scholars Archive presentations above provide photographic documentation for the species included in the following publications. The poster is a pictorial overview of some of the larger debris algae made for teaching. -
Ariile Protejate – Zone De Conservare Durabilă a Patrimoniului Natural
Ariile protejate – zone de conservare durabilă a patrimoniului natural Viorel ROŞCA Importanţa ariilor protejate Ariile protejate sunt vitale pentru conservarea valorilor globale şi regionale ale biodiversităţii, asigurându-se şi generaţiilor viitoare dreptul de a se bucura de binefacerile naturii, iar respectul faţă de legităţile acesteia constituie de fapt respectul pentru noi înşine. Protejarea acestor „perle” ale patrimoniului natural constituie astăzi un deziderat de prim rang al întregii omeniri, în condiţiile în care nevoile de spaţiu din ce în ce mai mari pentru cerinţele socio-economice au ca impact diminuarea diversităţii biologice în sistemele naturale şi seminaturale şi, implicit, perturbarea mecanismelor de reglaj ale sistemului climatic planetar. Forul mondial – Uniunea Internaţională de Conservarea Naturii (I.U.C.N.) – a stabilit un sistem pentru definirea şi clasificarea ariilor protejate, categoriile de management ale acestora, bine reprezentate şi în România, fiind următoarele: Ia – Rezervaţie naturală strictă (rezervaţie ştiinţifică); Ib – Arie naturală sălbatică; II – Parcuri naţionale; III – Monumente ale naturii; IV – Arie de gestionare a habitatelor / speciilor (rezervaţie naturală); V – Peisaj terestru protejat (parcuri naturale); VI - Arie protejată cu resurse gestionate. Prin constituirea ariilor protejate se asigură conservarea zonelor cu elemente naturale deosebite, nealterate de componente antropice, în care să se desfăşoare în principal activităţi de evaluare şi monitorizare a capitalului natural, de educaţie ecologică şi de ecoturism. Sunt interzise activităţile susceptibile să genereze impact negativ asupra acestor zone, în special asupra componentelor naturale care au constituit baza fundamentării ştiinţifice la înfiinţarea acestor arii. Ariile protejate, prin valoarea lor naturală, ştiinţifică, educaţională şi gradul redus al intervenţiei umane pe teritoriul lor, sunt cele mai bune exemple şi modele de ecosisteme naturale şi seminaturale. -
The Marine Vegetation of the Kerguelen Islands: History of Scientific Campaigns, Inventory of the Flora and First Analysis of Its Biogeographical Affinities
cryptogamie Algologie 2021 ● 42 ● 12 DIRECTEUR DE LA PUBLICATION / PUBLICATION DIRECTOR : Bruno DAVID Président du Muséum national d’Histoire naturelle RÉDACTRICE EN CHEF / EDITOR-IN-CHIEF : Line LE GALL Muséum national d’Histoire naturelle ASSISTANTE DE RÉDACTION / ASSISTANT EDITOR : Marianne SALAÜN ([email protected]) MISE EN PAGE / PAGE LAYOUT : Marianne SALAÜN RÉDACTEURS ASSOCIÉS / ASSOCIATE EDITORS Ecoevolutionary dynamics of algae in a changing world Stacy KRUEGER-HADFIELD Department of Biology, University of Alabama, 1300 University Blvd, Birmingham, AL 35294 (United States) Jana KULICHOVA Department of Botany, Charles University, Prague (Czech Republic) Cecilia TOTTI Dipartimento di Scienze della Vita e dell’Ambiente, Università Politecnica delle Marche, Via Brecce Bianche, 60131 Ancona (Italy) Phylogenetic systematics, species delimitation & genetics of speciation Sylvain FAUGERON UMI3614 Evolutionary Biology and Ecology of Algae, Departamento de Ecología, Facultad de Ciencias Biologicas, Pontificia Universidad Catolica de Chile, Av. Bernardo O’Higgins 340, Santiago (Chile) Marie-Laure GUILLEMIN Instituto de Ciencias Ambientales y Evolutivas, Universidad Austral de Chile, Valdivia (Chile) Diana SARNO Department of Integrative Marine Ecology, Stazione Zoologica Anton Dohrn, Villa Comunale, 80121 Napoli (Italy) Comparative evolutionary genomics of algae Nicolas BLOUIN Department of Molecular Biology, University of Wyoming, Dept. 3944, 1000 E University Ave, Laramie, WY 82071 (United States) Heroen VERBRUGGEN School of BioSciences,