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Bacteria Belonging to Pseudomonas Typographi Sp. Nov. from the Bark Beetle Ips Typographus Have Genomic Potential to Aid in the Host Ecology
insects Article Bacteria Belonging to Pseudomonas typographi sp. nov. from the Bark Beetle Ips typographus Have Genomic Potential to Aid in the Host Ecology Ezequiel Peral-Aranega 1,2 , Zaki Saati-Santamaría 1,2 , Miroslav Kolaˇrik 3,4, Raúl Rivas 1,2,5 and Paula García-Fraile 1,2,4,5,* 1 Microbiology and Genetics Department, University of Salamanca, 37007 Salamanca, Spain; [email protected] (E.P.-A.); [email protected] (Z.S.-S.); [email protected] (R.R.) 2 Spanish-Portuguese Institute for Agricultural Research (CIALE), 37185 Salamanca, Spain 3 Department of Botany, Faculty of Science, Charles University, Benátská 2, 128 01 Prague, Czech Republic; [email protected] 4 Laboratory of Fungal Genetics and Metabolism, Institute of Microbiology of the Academy of Sciences of the Czech Republic, 142 20 Prague, Czech Republic 5 Associated Research Unit of Plant-Microorganism Interaction, University of Salamanca-IRNASA-CSIC, 37008 Salamanca, Spain * Correspondence: [email protected] Received: 4 July 2020; Accepted: 1 September 2020; Published: 3 September 2020 Simple Summary: European Bark Beetle (Ips typographus) is a pest that affects dead and weakened spruce trees. Under certain environmental conditions, it has massive outbreaks, resulting in attacks of healthy trees, becoming a forest pest. It has been proposed that the bark beetle’s microbiome plays a key role in the insect’s ecology, providing nutrients, inhibiting pathogens, and degrading tree defense compounds, among other probable traits. During a study of bacterial associates from I. typographus, we isolated three strains identified as Pseudomonas from different beetle life stages. In this work, we aimed to reveal the taxonomic status of these bacterial strains and to sequence and annotate their genomes to mine possible traits related to a role within the bark beetle holobiont. -
Response of Azotobacter , Pseudomonas and Trichoderma on Growth of Apple Seedling
2012 International Conference on Biological and Life Sciences IPCBEE vol.40 (2012) © (2012) IACSIT Press, Singapore Response of Azotobacter , Pseudomonas and Trichoderma on Growth of Apple Seedling + Jayant Raman Department of Botany and Microbiology, Gurukul Kangri Vishwavidyalaya, Hardwar-249404, Uttarakhand Abstract. The investigation on the efficacy of biofertilizers (Azotobacter chroococcum, Pseudomonas striata and Trichoderma viride) considering different aspects of seedling growth under apple nursery conditions enabled to reach the positive conclusions. Azotobacter chroococcum and Trichoderma viride increased the maximum germination per cent of seeds while the maximum survival of seedlings was observed on inoculation with Azotobacter chroococcum and Trichoderma viride. Azotobacter chroococcum and Pseudomonas striata was found beneficial in promoting the growth of seedling by increasing the growth rate of length and diameter of seedlings. Trichoderma viride also helped against the pests and diseases at the same time provided sufficient moisture in dry spell. The highest growth rate of length and diameter of seedling was observed on inoculation with Azotobacter chroococcum + Pseudomonas striata + Trichoderma viride. The maximum initiation and increase rate in production of number of leaves was observed on inoculation with Azotobacter chroococcum and Pseudomonas striata. This treatment also produced large sized leaves. The highest content of N,P,K, Zn and Cu in leaves was analyzed on inoculation with Azotobacter chroococcum + Pseudomonas striata + Trichoderma viride. The highest reduction of the pests attack was observed on inoculation with Pseudomonas striata and Trichoderma viride, while the infestation was least in seedling due to antifungal fungistatic organic compounds and toxins on inoculation with Azotobacter chroococcum + Pseudomonas striata + Trichoderma viride. The good growth of root in seedlings was observed on inoculation with Azotobacter chroococcum + Pseudomonas striata + Trichoderma viride. -
Journal of Microbiology, Immunology and Infection
JOURNAL OF MICROBIOLOGY, IMMUNOLOGY AND INFECTION AUTHOR INFORMATION PACK TABLE OF CONTENTS XXX . • Description p.1 • Impact Factor p.1 • Abstracting and Indexing p.2 • Editorial Board p.2 • Guide for Authors p.4 ISSN: 1684-1182 DESCRIPTION . Journal of Microbiology, Immunology and Infection, launched in 1968, is the official bi-monthly publication of the Taiwan Society of Microbiology, the Chinese Society of Immunology, the Infectious Diseases Society of Taiwan and the Taiwan Society of Parasitology. The journal is an open access journal, committed to disseminating information on the latest trends and advances in microbiology, immunology, infectious diseases and parasitology. Articles on clinical or laboratory investigations of relevance to microbiology, immunology, infectious diseases, parasitology and other related fields that are of interest to the medical profession are eligible for consideration. Article types considered include perspectives, review articles, original articles, brief reports and correspondence. The Editorial Board of the Journal comprises a dedicated team of local and international experts in the field of microbiology, immunology, infectious diseases and parasitology. All members of the Editorial Board actively guide and set the direction of the journal. With the aim of promoting effective and accurate scientific information, an expert panel of referees constitutes the backbone of the peer- review process in evaluating the quality and content of manuscripts submitted for publication. JMII is open access and indexed in SCIE, PubMed, MEDLINE, EMBASE, Scopus, AIDS & Cancer Reseach, CABI, BIOSIS Previews, Biological Abstracts, EBSCOhost, CancerLit, Reactions Weekly (online), Chemical Abstracts, HealthSTAR, Global Health, ProQuest. Benefits to authors We also provide many author benefits, such as free PDFs, a liberal copyright policy, special discounts on Elsevier publications and much more. -
Diversity and Characterization of Azotobacter Isolates Obtained from Rice Rhizosphere Soils in Taiwan
Ann Microbiol (2018) 68:17–26 https://doi.org/10.1007/s13213-017-1312-0 ORIGINAL ARTICLE Diversity and characterization of Azotobacter isolates obtained from rice rhizosphere soils in Taiwan Syuan-Lu Chen 1 & Meng-Ke Tsai1 & Yuh-Ming Huang1 & Cheng-Hua Huang1 Received: 4 March 2017 /Accepted: 7 November 2017 /Published online: 15 December 2017 # Springer-Verlag GmbH Germany, part of Springer Nature and the University of Milan 2017 Abstract Azotobacter species, free-living nitrogen-fixing A. chroococcum CHB 869 may be used to develop bacteria, have been used as biofertilizers to improve the pro- biofertilizers for rice cultivation because they significantly ductivity of non-leguminous crops, including rice, due to their promoted rice growth. This study contributes to the selection various plant growth-promoting traits. The purposes of this of suitable Azotobacter strains for developing biofertilizer for- study were to characterize Azotobacter species isolated from mulations and soil management strategies of Azotobacter for rice rhizospheres in Taiwan and to determine the relationship paddy fields. between the species diversity of Azotobacter and soil proper- ties. A total of 98 Azotobacter isolates were isolated from 27 Keywords Nitrogen-fixing bacteria . Rice . Diazotropic paddy fields, and 16S rRNA gene sequences were used to bacteria . Nitrogenase . Diversity identify Azotobacter species. The characteristics of these Azotobacter strains were analyzed including carbon source utilization and plant growth-promoting traits such as nitrogen Introduction fixation activity, indole acetic acid production, phosphate- solubilizing ability, and siderophore secretion. Of the 98 Rice is one of the main food crops in the world, being con- strains isolated in this study, 12 were selected to evaluate their sumed by about 50% of world and 85% of Asian populations effects on rice growth. -
Biofilms and Biodiversity: an Interactive Exploration of Aquatic
Journal of Industrial Microbiology & Biotechnology (2000) 24, 334–338 2000 Society for Industrial Microbiology 1367-5435/00 $15.00 www.nature.com/jim Biofilms and biodiversity: an interactive exploration of aquatic microbial biotechnology and ecology JA Frederick1, D Jacobs2 and WR Jones3 1Maryland Sea Grant Extension Program, Columbus Center, 701 E Pratt St, Baltimore, MD 21202; 2Maryland Sea Grant, 0112 Skinner Hall, College Park, MD 20742; 3Center of Marine Biotechnology, University of Maryland Biotechnology Institute, 701 E Pratt St, Baltimore, MD 21202, USA The study of biofilms provides a unique educational opportunity to examine ecosystems, biodiversity and appli- cations of environmental biotechnology. There are many variables that could be studied for measuring the interac- tions between bacterial biofilms and invertebrate biodiversity as a method for assessing the health of aquatic eco- systems. These interactions also lend themselves to an easily replicated model system which can be used to reach a wide audience with an educational opportunity for students as well as a professional development opportunity for teachers. At the foundation of the research are invaluable basic microbiology skills: strain collection, isolation, cultivation and characterization. Through the additional process of characterizing, identifying and enumerating invertebrate organisms that attach to bacterial biofilms in aquatic ecosystems, there evolved a multidisciplinary class laboratory activity that has found broad application. This activity is captivating not only to undergraduate microbiology students but to middle and high school students and their teachers. The demand for information about the activity has led to the development of a truly interactive web-based lesson, which in turn has resulted in additional inquiries and further refinement of the lesson as an undergraduate independent research course. -
Holding Hands with Bacteria the Life and Work of Marjory Stephenson
SPRINGER BRIEFS IN MOLECULAR SCIENCE HISTORY OF CHEMISTRY Soňa Štrbáňová Holding Hands with Bacteria The Life and Work of Marjory Stephenson 123 SpringerBriefs in Molecular Science History of Chemistry Series editor Seth C. Rasmussen, Fargo, North Dakota, USA More information about this series at http://www.springer.com/series/10127 Soňa Štrbáňová Holding Hands with Bacteria The Life and Work of Marjory Stephenson 1 3 Soňa Štrbáňová Academy of Sciences of the Czech Republic Prague Czech Republic ISSN 2191-5407 ISSN 2191-5415 (electronic) SpringerBriefs in Molecular Science ISSN 2212-991X SpringerBriefs in History of Chemistry ISBN 978-3-662-49734-0 ISBN 978-3-662-49736-4 (eBook) DOI 10.1007/978-3-662-49736-4 Library of Congress Control Number: 2016934952 © The Author(s) 2016 This work is subject to copyright. All rights are reserved by the Publisher, whether the whole or part of the material is concerned, specifically the rights of translation, reprinting, reuse of illustrations, recitation, broadcasting, reproduction on microfilms or in any other physical way, and transmission or information storage and retrieval, electronic adaptation, computer software, or by similar or dissimilar methodology now known or hereafter developed. The use of general descriptive names, registered names, trademarks, service marks, etc. in this publication does not imply, even in the absence of a specific statement, that such names are exempt from the relevant protective laws and regulations and therefore free for general use. The publisher, the authors and the editors are safe to assume that the advice and information in this book are believed to be true and accurate at the date of publication. -
Studies on the in Vitro Digestion of Cellulose By
STUDIES ON THE IN VITRO DIGESTION OF CELLULOSE BY RUIvIEN MICROORGANISMS By ROBERT LAWRENCE SALSBURY A THESIS Submitted to the School of Graduate Studies of Michigan State College of Agriculture and Applied Science in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY Department of Dairy 1955 ProQuest Number: 10008419 All rights reserved INFORMATION TO ALL USERS The quality of this reproduction is dependent upon the quality of the copy submitted. In the unlikely event that the author did not send a complete manuscript and there are missing pages, these will be noted. Also, if material had to be removed, a note will indicate the deletion. uest ProQuest 10008419 Published by ProQuest LLC (2016). Copyright of the Dissertation is held by the Author. All rights reserved. This work is protected against unauthorized copying under Title 17, United States Code Microform Edition © ProQuest LLC. ProQuest LLC. 789 East Eisenhower Parkway P.O. Box 1346 Ann Arbor, Ml 48106- 1346 STUDIES ON THE IN VITRO DIGESTION OF CELLULOSE BY RUMEN MICROORGANISMS By ROBERT LAURENCE SALSBURY rjmiirr AN ABSTRACT Submitted to the School of Graduate Studies of Michigan State College of Agriculture and Applied Science in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY Department of Dairy Year 1955 Approved 1 Four methods of incubating rumen fluid for the purpose of studying cellulose digestion in vitro were examined. Under the conditions used, it was found that the maximum cellulose digestion and most reproducible results were obtained when a semipermeable sac was used and the inoculum: mineral-solution ratio was small. -
Diversity of Free-Living Nitrogen Fixing Bacteria in the Badlands of South Dakota Bibha Dahal South Dakota State University
South Dakota State University Open PRAIRIE: Open Public Research Access Institutional Repository and Information Exchange Theses and Dissertations 2016 Diversity of Free-living Nitrogen Fixing Bacteria in the Badlands of South Dakota Bibha Dahal South Dakota State University Follow this and additional works at: http://openprairie.sdstate.edu/etd Part of the Bacteriology Commons, and the Environmental Microbiology and Microbial Ecology Commons Recommended Citation Dahal, Bibha, "Diversity of Free-living Nitrogen Fixing Bacteria in the Badlands of South Dakota" (2016). Theses and Dissertations. 688. http://openprairie.sdstate.edu/etd/688 This Thesis - Open Access is brought to you for free and open access by Open PRAIRIE: Open Public Research Access Institutional Repository and Information Exchange. It has been accepted for inclusion in Theses and Dissertations by an authorized administrator of Open PRAIRIE: Open Public Research Access Institutional Repository and Information Exchange. For more information, please contact [email protected]. DIVERSITY OF FREE-LIVING NITROGEN FIXING BACTERIA IN THE BADLANDS OF SOUTH DAKOTA BY BIBHA DAHAL A thesis submitted in partial fulfillment of the requirements for the Master of Science Major in Biological Sciences Specialization in Microbiology South Dakota State University 2016 iii ACKNOWLEDGEMENTS “Always aim for the moon, even if you miss, you’ll land among the stars”.- W. Clement Stone I would like to express my profuse gratitude and heartfelt appreciation to my advisor Dr. Volker Brӧzel for providing me a rewarding place to foster my career as a scientist. I am thankful for his implicit encouragement, guidance, and support throughout my research. This research would not be successful without his guidance and inspiration. -
Get App Journal Flyer
IMPACT Indexed in: FACTOR PubMed 4.128 an Open Access Journal by MDPI The Hellenic Society Mikrobiokosmos (MBK) and Spanish Society for Nitrogen Fixation (SEFIN) are affiliated with Microorganisms IMPACT Indexed in: FACTOR PubMed 4.128 an Open Access Journal by MDPI Editor-in-Chief Message from the Editor-in-Chief Prof. Dr. Martin von Bergen “Microorganism” merges the idea of the very small with the idea of the evolving reproducing organism is a unifying principle for the discipline of microbiology. Our journal recognizes the broadly diverse yet connected nature of microorganisms and provides an advanced publishing forum for original articles from scientists involved in high-quality basic and applied research on any prokaryotic or eukaryotic microorganism, and for research on the ecology, genomics and evolution of microbial communities as well as that exploring cultured microorganisms in the laboratory. Author Benefits Open Access Unlimited and free access for readers No Copyright Constraints Retain copyright of your work and free use of your article Impact Factor 4.128 (2020 Journal Citation Reports®) Thorough and Rapid Peer-Review Coverage by Leading Indexing Services Science Citation Index Expanded - Web of Science (Clarivate Analytics), BIOSIS Previews (Clarivate Analytics), PubMed (NLM), Scopus (Elsevier) No Space Constraints, No Extra Space or Color Charges No restriction on the length of the papers, number of figures or colors Major Forum for Readers Interested in Diverse Aspects of Microorganisms Discounts on Article Processing Charges (APC) If you belong to an institute that participates with the MDPI Institutional Open Access Program (IOAP) Aims and Scope Microorganisms publishes original research, reviews, short communications, and commentaries. -
Microbiology and Immunology 1
Microbiology and Immunology 1 Microbiology and Programs Immunology Undergraduate Programs of Study Chair Major • Li Wu • Major in Microbiology (Bachelor of Science) Director, Undergraduate Studies Minor • Richard J. Roller • Minor in Microbiology Director, Graduate Studies • Timothy L. Yahr Graduate Programs of Study Undergraduate major: microbiology (B.S.) Majors Undergraduate minor: microbiology • Master of Science in Microbiology Graduate degrees: M.S. in microbiology; Ph.D. in microbiology • Doctor of Philosophy in Microbiology Faculty: https://medicine.uiowa.edu/microbiology/people/ primary-appointments Facilities Website: https://medicine.uiowa.edu/microbiology/ The Department of Microbiology and Immunology is Study in the Department of Microbiology and Immunology situated on the University of Iowa health sciences campus, is dedicated to the branch of biological sciences that where it shares the Bowen Science Building with the investigates the smallest living things: microbes that include Departments of Anatomy and Cell Biology, Biochemistry bacteria, archaea, fungi, algae, protozoa, and viruses. It and Molecular Biology, Molecular Physiology and Biophysics, is coupled with immunology that includes the study of the and Neuroscience and Pharmacology. Laboratory space and protective responses of higher organisms to disease-causing modern equipment are available for teaching and research. microbes and cancers, and mistakes in immune function. Microbiology and immunology often interact in humans at the microbiome, those microbes that live with humans on their Courses skin and mucosal surfaces, and yet must be restricted from causing diseases by the immune system. Microbiology and Immunology Microbiology and immunology are at the forefront of the Courses modern biological revolution. Microbes are experimental subjects of choice for examining genetic and biological MICR:2157 General Microbiology 3 s.h. -
Top Peer Reviewed Journals – Microbiology
Top Peer Reviewed Journals – Microbiology Presented to Iowa State University Presented by Thomson Reuters Microbiology The subject discipline for Microbiology is made of 5 narrow subject categories from the Web of Science. The 5 categories that make up Microbiology are: 1. Microbiology 4. Parasitology 2. Microscopy 5. Virology 3. Mycology The chart below provides an ordered view of the top peer reviewed journals within the 1st quartile for Microbiology based on Impact Factors (IF), three year averages and their quartile ranking. Journal 2009 IF 2010 IF 2011 IF Average IF NATURE REVIEWS MICROBIOLOGY 17.64 20.68 21.18 19.83 CLINICAL MICROBIOLOGY REVIEWS 14.69 13.5 16.12 14.77 Cell Host & Microbe 13.02 13.72 13.5 13.41 ANNUAL REVIEW OF MICROBIOLOGY 12.8 12.41 14.34 13.18 MICROBIOLOGY AND MOLECULAR 12.58 12.22 13.01 12.60 BIOLOGY REVIEWS FEMS MICROBIOLOGY REVIEWS 9.78 11.79 10.96 10.84 PLoS Pathogens 8.97 9.07 9.12 9.05 ADVANCES IN MICROBIAL PHYSIOLOGY 5.75 8.55 9.87 8.06 CURRENT OPINION IN MICROBIOLOGY 7.86 7.71 7.92 7.83 TRENDS IN MICROBIOLOGY 6.89 7.5 7.91 7.43 REVIEWS IN MEDICAL VIROLOGY 7.44 5.6 7.2 6.75 ISME Journal 6.39 6.15 7.37 6.64 CRITICAL REVIEWS IN MICROBIOLOGY 5.34 6.27 5.81 CELLULAR MICROBIOLOGY 5.72 5.62 5.45 5.60 Advances in Parasitology 6.23 4.39 5.31 mBio 5.31 5.31 Retrovirology 4.1 5.23 6.47 5.27 JOURNAL OF VIROLOGY 5.15 5.18 5.4 5.24 MOLECULAR MICROBIOLOGY 5.36 4.81 5.01 5.06 TRENDS IN PARASITOLOGY 4.29 4.9 5.14 4.78 ADVANCES IN VIRUS RESEARCH 5.52 4.83 3.97 4.77 ANTIMICROBIAL AGENTS AND 4.8 4.67 4.84 4.77 CHEMOTHERAPY -
SCIENCE CITATION INDEX EXPANDED - JOURNAL LIST Total Journals: 8631
SCIENCE CITATION INDEX EXPANDED - JOURNAL LIST Total journals: 8631 1. 4OR-A QUARTERLY JOURNAL OF OPERATIONS RESEARCH 2. AAPG BULLETIN 3. AAPS JOURNAL 4. AAPS PHARMSCITECH 5. AATCC REVIEW 6. ABDOMINAL IMAGING 7. ABHANDLUNGEN AUS DEM MATHEMATISCHEN SEMINAR DER UNIVERSITAT HAMBURG 8. ABSTRACT AND APPLIED ANALYSIS 9. ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 10. ACADEMIC EMERGENCY MEDICINE 11. ACADEMIC MEDICINE 12. ACADEMIC PEDIATRICS 13. ACADEMIC RADIOLOGY 14. ACCOUNTABILITY IN RESEARCH-POLICIES AND QUALITY ASSURANCE 15. ACCOUNTS OF CHEMICAL RESEARCH 16. ACCREDITATION AND QUALITY ASSURANCE 17. ACI MATERIALS JOURNAL 18. ACI STRUCTURAL JOURNAL 19. ACM COMPUTING SURVEYS 20. ACM JOURNAL ON EMERGING TECHNOLOGIES IN COMPUTING SYSTEMS 21. ACM SIGCOMM COMPUTER COMMUNICATION REVIEW 22. ACM SIGPLAN NOTICES 23. ACM TRANSACTIONS ON ALGORITHMS 24. ACM TRANSACTIONS ON APPLIED PERCEPTION 25. ACM TRANSACTIONS ON ARCHITECTURE AND CODE OPTIMIZATION 26. ACM TRANSACTIONS ON AUTONOMOUS AND ADAPTIVE SYSTEMS 27. ACM TRANSACTIONS ON COMPUTATIONAL LOGIC 28. ACM TRANSACTIONS ON COMPUTER SYSTEMS 29. ACM TRANSACTIONS ON COMPUTER-HUMAN INTERACTION 30. ACM TRANSACTIONS ON DATABASE SYSTEMS 31. ACM TRANSACTIONS ON DESIGN AUTOMATION OF ELECTRONIC SYSTEMS 32. ACM TRANSACTIONS ON EMBEDDED COMPUTING SYSTEMS 33. ACM TRANSACTIONS ON GRAPHICS 34. ACM TRANSACTIONS ON INFORMATION AND SYSTEM SECURITY 35. ACM TRANSACTIONS ON INFORMATION SYSTEMS 36. ACM TRANSACTIONS ON INTELLIGENT SYSTEMS AND TECHNOLOGY 37. ACM TRANSACTIONS ON INTERNET TECHNOLOGY 38. ACM TRANSACTIONS ON KNOWLEDGE DISCOVERY FROM DATA 39. ACM TRANSACTIONS ON MATHEMATICAL SOFTWARE 40. ACM TRANSACTIONS ON MODELING AND COMPUTER SIMULATION 41. ACM TRANSACTIONS ON MULTIMEDIA COMPUTING COMMUNICATIONS AND APPLICATIONS 42. ACM TRANSACTIONS ON PROGRAMMING LANGUAGES AND SYSTEMS 43. ACM TRANSACTIONS ON RECONFIGURABLE TECHNOLOGY AND SYSTEMS 44.