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Distributions of Extinction Times from Fossil Ages and Tree Topologies: the Example of Some Mid-Permian Synapsid Extinctions Gilles Didier, Michel Laurin
Distributions of extinction times from fossil ages and tree topologies: the example of some mid-Permian synapsid extinctions Gilles Didier, Michel Laurin To cite this version: Gilles Didier, Michel Laurin. Distributions of extinction times from fossil ages and tree topologies: the example of some mid-Permian synapsid extinctions. 2021. hal-03258099v2 HAL Id: hal-03258099 https://hal.archives-ouvertes.fr/hal-03258099v2 Preprint submitted on 20 Sep 2021 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Distributions of extinction times from fossil ages and tree topologies: the example of some mid-Permian synapsid extinctions Gilles Didier1 and Michel Laurin2 1 IMAG, Univ Montpellier, CNRS, Montpellier, France 2 CR2P (\Centre de Pal´eontologie { Paris"; UMR 7207), CNRS/MNHN/SU, Mus´eumNational d'Histoire Naturelle, Paris, France September 16, 2021 Abstract Given a phylogenetic tree that includes only extinct, or a mix of extinct and extant taxa, where at least some fossil data are available, we present a method to compute the distribution of the extinction time of a given set of taxa under the Fossilized-Birth-Death model. Our approach differs from the previous ones in that it takes into account (i) the possibility that the taxa or the clade considered may diversify before going extinct and (ii) the whole phylogenetic tree to estimate extinction times, whilst previous methods do not consider the diversification process and deal with each branch independently. -
Record of Carcharocles Megalodon in the Eastern
Estudios Geológicos julio-diciembre 2015, 71(2), e032 ISSN-L: 0367-0449 doi: http://dx.doi.org/10.3989/egeol.41828.342 Record of Carcharocles megalodon in the Eastern Guadalquivir Basin (Upper Miocene, South Spain) Registro de Carcharocles megalodon en el sector oriental de la Cuenca del Guadalquivir (Mioceno superior, Sur de España) M. Reolid, J.M. Molina Departamento de Geología, Universidad de Jaén, Campus Las Lagunillas sn, 23071 Jaén, Spain. Email: [email protected] / [email protected] ABSTRACT Tortonian diatomites of the San Felix Quarry (Porcuna), in the Eastern Guadalquivir Basin, have given isolated marine vertebrate remains that include a large shark tooth (123.96 mm from apex to the baseline of the root). The large size of the crown height (92.2 mm), the triangular shape, the broad serrated crown, the convex lingual face and flat labial face, and the robust, thick angled root determine that this specimen corresponds to Carcharocles megalodon. The symmetry with low slant shows it to be an upper anterior tooth. The total length estimated from the tooth crown height is calculated by means of different methods, and comparison is made with Carcharodon carcharias. The final inferred total length of around 11 m classifies this specimen in the upper size range of the known C. megalodon specimens. The palaeogeography of the Guadalquivir Basin close to the North Betic Strait, which connected the Atlantic Ocean to the Mediterranean Sea, favoured the interaction of the cold nutrient-rich Atlantic waters with warmer Mediterranean waters. The presence of diatomites indicates potential upwelling currents in this context, as well as high productivity favouring the presence of large vertebrates such as mysticetid whales, pinnipeds and small sharks (Isurus). -
Papers in Press
Papers in Press “Papers in Press” includes peer-reviewed, accepted manuscripts of research articles, reviews, and short notes to be published in Paleontological Research. They have not yet been copy edited and/or formatted in the publication style of Paleontological Research. As soon as they are printed, they will be removed from this website. Please note they can be cited using the year of online publication and the DOI, as follows: Humblet, M. and Iryu, Y. 2014: Pleistocene coral assemblages on Irabu-jima, South Ryukyu Islands, Japan. Paleontological Research, doi: 10.2517/2014PR020. doi:10.2517/2018PR013 Features and paleoecological significance of the shark fauna from the Upper Cretaceous Hinoshima Formation, Himenoura Group, Southwest Japan Accepted Naoshi Kitamura 4-8-7 Motoyama, Chuo-ku Kumamoto, Kumamoto 860-0821, Japan (e-mail: [email protected]) Abstract. The shark fauna of the Upper Cretaceous Hinoshima Formation (Santonian: 86.3–83.6 Ma) of the manuscriptHimenoura Group (Kamiamakusa, Kumamoto Prefecture, Kyushu, Japan) was investigated based on fossil shark teeth found at five localities: Himedo Park, Kugushima, Wadanohana, Higashiura, and Kotorigoe. A detailed geological survey and taxonomic analysis was undertaken, and the habitat, depositional environment, and associated mollusks of each locality were considered in the context of previous studies. Twenty-one species, 15 genera, 11 families, and 6 orders of fossil sharks are recognized from the localities. This assemblage is more diverse than has previously been reported for Japan, and Lamniformes and Hexanchiformes were abundant. Three categories of shark fauna are recognized: a coastal region (Himedo Park; probably a breeding site), the coast to the open sea (Kugushima and Wadanohana), and bottom-dwelling or near-seafloor fauna (Kugushima, Wadanohana, Higashiura, and Kotorigoe). -
Whale Shark Rhincodon Typus Populations Along the West Coast of the Gulf of California and Implications for Management
Vol. 18: 115–128, 2012 ENDANGERED SPECIES RESEARCH Published online August 16 doi: 10.3354/esr00437 Endang Species Res Whale shark Rhincodon typus populations along the west coast of the Gulf of California and implications for management Dení Ramírez-Macías1,2,*, Abraham Vázquez-Haikin3, Ricardo Vázquez-Juárez1 1Centro de Investigaciones Biológicas del Noroeste, Mar Bermejo 195, Col. Playa Palo de Santa Rita, La Paz, Baja California Sur 23096, Mexico 2Tiburón Ballena México de Conciencia México, Manatí 4802, Col. Esperanza III, La Paz, Baja California Sur 23090, Mexico 3Asociación de Pesca Deportiva y Ecoturismo de Bahía de los Ángeles, Domicilio conocido Bahía de los Ángeles, Baja California 22980, Mexico ABSTRACT: We used photo-identification data collected from 2003 through 2009 to estimate pop- ulation structure, site fidelity, abundance, and movements of this species along the west coast of the Gulf of California to make recommendations for effective conservation and management. Of 251 whale sharks identified from 1784 photographs, 129 sharks were identified in Bahía de Los Ángeles and 125 in Bahía de La Paz. Only juveniles (mostly small) were found in these 2 bays. At Isla Espíritu Santo, we identified adult females; at Gorda Banks we identified 15 pregnant females. High re-sighting rates within and across years provided evidence of site fidelity among juvenile sharks in the 2 bays. Though the juveniles were not permanent residents, they used the areas regularly from year to year. A proportion of the juveniles spent days to a month or more in the coastal waters of the 2 bays before leaving, and periods of over a month outside the study areas before entering the bays again. -
Download Independent Chucks Brochure
PRODUCT CATALOG www.buckchuck.com Table of Contents Technical Information Why a Buck? .................................................................................................................................................................................................................................................3 Manual Chuck Selection ......................................................................................................................................................................................................................5 Spindle Identification for Mounting Plates .................................................................................................................................................................................6 Obsolete Chuck Crossover ...............................................................................................................................................................................................................7 Parts Breakdown ......................................................................................................................................................................................................................................8 ATSC Manual Steel Body Scroll Chucks --- Ajust-Tru ® Style 3 and 6 Jaw - Forged Steel Body Scroll Chuck - Hardened Reversible Top Jaws .................................................................................................9 3 and 6 Jaw - Forged Steel Body Scroll Chuck - Hardened -
Thomas Jefferson Meg Tooth
The ECPHORA The Newsletter of the Calvert Marine Museum Fossil Club Volume 30 Number 3 September 2015 Thomas Jefferson Meg Tooth Features Thomas Jefferson Meg The catalogue number Review; Walking is: ANSP 959 Whales Inside The tooth came from Ricehope Estate, Snaggletooth Shark Cooper River, Exhibit South Carolina. Tiktaalik Clavatulidae In 1806, it was Juvenile Bald Eagle originally collected or Sculpting Whale Shark owned by Dr. William Moroccan Fossils Reid. Prints in the Sahara Volunteer Outing to Miocene-Pliocene National Geographic coastal plain sediments. Dolphins in the Chesapeake Sloth Tooth Found SharkFest Shark Iconography in Pre-Columbian Panama Hippo Skulls CT- Scanned Squalus sp. Teeth Sperm Whale Teeth On a recent trip to the Academy of Natural Sciences of Drexel University (Philadelphia), Collections Manager Ned Gilmore gave John Nance and me a behind -the-scenes highlights tour. Among the fossils that belonged to Thomas☼ Jefferson (left; American Founding Father, principal author of the Declaration of Independence, and third President of the United States) was this Carcharocles megalodon tooth. Jefferson’s interests and knowledge were encyclopedic; a delight to know that they included paleontology. Hand by J. Nance. Photo by S. Godfrey. Jefferson portrait from: http://www.biography.com/people/thomas-jefferson-9353715 ☼ CALVERT MARINE MUSEUM www.calvertmarinemuseum.com 2 The Ecphora September 2015 Book Review: The Walking 41 million years ago and has worldwide distribution. It was fully aquatic, although it did have residual Whales hind limbs. In later chapters, Professor Thewissen George F. Klein discusses limb development and various genetic factors that make whales, whales. This is a The full title of this book is The Walking complicated topic, but I found these chapters very Whales — From Land to Water in Eight Million clear and readable. -
Great White Shark) on Appendix I of the Convention of International Trade in Endangered Species of Wild Fauna and Flora (CITES)
Prop. 11.48 Proposal to include Carcharodon carcharias (Great White Shark) on Appendix I of the Convention of International Trade in Endangered Species of Wild Fauna and Flora (CITES) A. PROPOSAL ..............................................................................................3 B. PROPONENT............................................................................................3 C. SUPPORTING STATEMENT....................................................................3 1. Taxonomy.........................................................................................................................3 1.1 Class.................................................................................................................................... 1.2 Order................................................................................................................................... 1.3 Family ................................................................................................................................. 1.4 Species ................................................................................................................................ 1.5 Scientific Synonyms............................................................................................................. 1.6 Common Names .................................................................................................................. 2. Biological Parameters......................................................................................................3 -
Morphology, Phylogeny, and Evolution of Diadectidae (Cotylosauria: Diadectomorpha)
Morphology, Phylogeny, and Evolution of Diadectidae (Cotylosauria: Diadectomorpha) by Richard Kissel A thesis submitted in conformity with the requirements for the degree of doctor of philosophy Graduate Department of Ecology & Evolutionary Biology University of Toronto © Copyright by Richard Kissel 2010 Morphology, Phylogeny, and Evolution of Diadectidae (Cotylosauria: Diadectomorpha) Richard Kissel Doctor of Philosophy Graduate Department of Ecology & Evolutionary Biology University of Toronto 2010 Abstract Based on dental, cranial, and postcranial anatomy, members of the Permo-Carboniferous clade Diadectidae are generally regarded as the earliest tetrapods capable of processing high-fiber plant material; presented here is a review of diadectid morphology, phylogeny, taxonomy, and paleozoogeography. Phylogenetic analyses support the monophyly of Diadectidae within Diadectomorpha, the sister-group to Amniota, with Limnoscelis as the sister-taxon to Tseajaia + Diadectidae. Analysis of diadectid interrelationships of all known taxa for which adequate specimens and information are known—the first of its kind conducted—positions Ambedus pusillus as the sister-taxon to all other forms, with Diadectes sanmiguelensis, Orobates pabsti, Desmatodon hesperis, Diadectes absitus, and (Diadectes sideropelicus + Diadectes tenuitectes + Diasparactus zenos) representing progressively more derived taxa in a series of nested clades. In light of these results, it is recommended herein that the species Diadectes sanmiguelensis be referred to the new genus -
Distributions of Extinction Times from Fossil Ages and Tree Topologies: the Example of Some Mid-Permian Synapsid Extinctions
bioRxiv preprint doi: https://doi.org/10.1101/2021.06.11.448028; this version posted June 11, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Distributions of extinction times from fossil ages and tree topologies: the example of some mid-Permian synapsid extinctions Gilles Didier1 and Michel Laurin2 1IMAG, Univ Montpellier, CNRS, Montpellier, France 2CR2P (“Centre de Recherches sur la Paléobiodiversité et les Paléoenvironnements”; UMR 7207), CNRS/MNHN/UPMC, Sorbonne Université, Muséum National d’Histoire Naturelle, Paris, France June 11, 2021 Abstract Given a phylogenetic tree of extinct and extant taxa with fossils where the only temporal infor- mation stands in the fossil ages, we devise a method to compute the distribution of the extinction time of a given set of taxa under the Fossilized-Birth-Death model. Our approach differs from the previous ones in that it takes into account the possibility that the taxa or the clade considered may diversify before going extinct, whilst previous methods just rely on the fossil recovery rate to estimate confidence intervals. We assess and compare our new approach with a standard previous one using simulated data. Results show that our method provides more accurate confidence intervals. This new approach is applied to the study of the extinction time of three Permo-Carboniferous synapsid taxa (Ophiacodontidae, Edaphosauridae, and Sphenacodontidae) that are thought to have disappeared toward the end of the Cisuralian, or possibly shortly thereafter. The timing of extinctions of these three taxa and of their component lineages supports the idea that a biological crisis occurred in the late Kungurian/early Roadian. -
First Description of a Tooth of the Extinct Giant Shark Carcharocles
First description of a tooth of the extinct giant shark Carcharocles megalodon (Agassiz, 1835) found in the province of Seville (SW Iberian Peninsula) (Otodontidae) Primera descripción de un diente del extinto tiburón gigante Carcharocles megalodon (Agassiz, 1835) encontrado en la provincia de Sevilla (SO de la Península Ibérica) (Otodontidae) José Luis Medina-Gavilán 1, Antonio Toscano 2, Fernando Muñiz 3, Francisco Javier Delgado 4 1. Sociedad de Estudios Ambientales (SOCEAMB) − Perú 4, 41100 Coria del Río, Sevilla (Spain) − [email protected] 2. Departamento de Geodinámica y Paleontología, Facultad de Ciencias Experimentales, Universidad de Huelva − Campus El Carmen, 21071 Huelva (Spain) − [email protected] 3. Departamento de Geodinámica y Paleontología, Facultad de Ciencias Experimentales, Universidad de Huelva − Campus El Carmen, 21071 Huelva (Spain) − [email protected] 4. Usuario de BiodiversidadVirtual.org − Álvarez Quintero 13, 41220 Burguillos, Sevilla (Spain) − [email protected] ABSTRACT: Fossil remains of the extinct giant shark Carcharocles megalodon (Agassiz, 1835) are rare in interior Andalusia (Southern Spain). For the first time, a fossil tooth belonging to this paleospecies is described from material found in the province of Seville (Burguillos). KEY WORDS: Carcharocles megalodon (Agassiz, 1835), megalodon, Otodontidae, fossil, paleontology, Burguillos, Seville, Tortonian. RESUMEN: Los restos del extinto tiburón gigante Carcharocles megalodon (Agassiz, 1835) son raros en el interior de Andalucía (sur de España). Por primera vez, se describe un diente fósil de esta paleoespecie a partir de material hallado en Sevilla (Burguillos). PALABRAS CLAVE: Carcharocles megalodon (Agassiz, 1835), megalodón, Otodontidae, fósil, paleontología, Burguillos, Sevilla, Tortoniense. Introduction Carcharocles megalodon (Agassiz, 1835), the megalodon, is widely recognised as the largest shark that ever lived. -
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JAWS: a Framework for High-Performance Web Servers
JAWS: A Framework for High-performance Web Servers James C. Hu Douglas C. Schmidt [email protected] [email protected] Department of Computer Science Washington University St. Louis, MO 63130 Abstract Siemens [1] and Kodak [2] and database search engines such as AltaVista and Lexis-Nexis. Developers of communication software face many challenges. To keep pace with increasing demand, it is essential to de- Communication software contains both inherent complexities, velop high-performance Web servers. However, developers such as fault detection and recovery, and accidental complex- face a remarkably rich set of design strategies when config- ities, such as the continuous re-rediscovery and re-invention uring and optimizing Web servers. For instance, developers of key concepts and components. Meeting these challenges must select from among a wide range of concurrency mod- requires a thorough understanding of object-oriented appli- els (such as Thread-per-Request vs. Thread Pool), dispatching cation frameworks and patterns. This paper illustrates how models (such as synchronous vs. asynchronous dispatching), we have applied frameworks and patterns for communication file caching models (such as LRU vs. LFU), and protocol pro- software to develop a high-performance Web server called cessing models (such as HTTP/1.0 vs. HTTP/1.1). No sin- JAWS. gle configuration is optimal for all hardware/software platform JAWS is an object-oriented framework that supports the and workloads [1, 3]. configuration of various Web server strategies, such as a The existence of all these alternative strategies ensures that Thread Pool concurrency model with asynchronous I/O and Web servers can be tailored to their users’ needs.