Antarctic Emerald Rockcod Have the Capacity to Compensate for Warming When Uncoupled from CO2-Acidification
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Proceedings of the 76Th National Conference of the Unione Zoologica Italiana
Quaderni del Centro Studi Alpino – IV th Proceedings of the 76 National Conference of the Unione Zoologica Italiana A cura di Marzio Zapparoli, Maria Cristina Belardinelli Università degli Studi della Tuscia 2015 Quaderni del Centro Studi Alpino – IV Unione Zoologica Italiana 76th National Conference Proceedings Viterbo, 15-18 September 2015 a cura di Marzio Zapparoli, Maria Cristina Belardinelli Università degli Studi della Tuscia 2015 1 Università degli Studi della Tuscia Centro Studi Alpino Via Rovigo 7, 38050 Pieve Tesino (TN) Sede Amministrativa c/o Dipartimento per l’Innovazione nei sistemi Biologici, Agroalimentari e Forestali, Università della Tuscia Via San Camillo de Lellis, s.n.c. 01100 Viterbo (VT) Consiglio del Centro Luigi Portoghesi (Presidente) Gian Maria Di Nocera Maria Gabriella Dionisi Giovanni Fiorentino Anna Scoppola Laura Selbmann Alessandro Sorrentino ISBN: 978 - 88 - 903595 - 4 - 5 Viterbo 2015 2 76th National Conference of the Unione Zoologica Italiana Università degli Studi della Tuscia Viterbo, 15-18 September 2015 Organizing Committee Anna Maria Fausto (President), Carlo Belfiore, Francesco Buonocore, Romolo Fochetti, Massimo Mazzini, Simona Picchietti, Nicla Romano, Giuseppe Scapigliati, Marzio Zapparoli Scientific Committee Elvira De Matthaeis (UZI President), Sapienza, Università di Roma Roberto Bertolani (UZI Secretary-Treasurer), Università di Modena e Reggio Emilia Carlo Belfiore, Università della Tuscia, Viterbo Giovanni Bernardini, Università dell’Insubria, Varese Ferdinando Boero, Università del Salento, -
Foraging Behaviour of Female Weddell Seals (Leptonychotes Weddellii) During Lactation: New Insights from Dietary Biomarkers
Foraging behaviour of female Weddell seals (Leptonychotes weddellii) during lactation: new insights from dietary biomarkers A thesis submitted in partial fulfilment of the requirements for the degree in Doctor of Philosophy in Antarctic Studies by Crystal C. Lenky November 2012 Acknowledgements Only one name appears on the cover of a thesis, but there are many people involved in its creation. First and foremost, I thank my supervisors for their endless encouragement, knowledge and insightful conversations throughout this journey. I thank Dr Regina Eisert for instilling in me an appreciation of the analytical method and her expertise on data analysis; Dr Victoria Metcalf for her friendship, enthusiasm and advice on all aspects of life; Dr Michael Lever for his wealth of knowledge on betaines and for providing me with lab and office space after the February 22 earthquake; Dr Olav Oftedal for his expertise in nutrition and guidance on scientific writing; Dr Marie Squire for her guidance on the NMR assays, and Professor Bryan Storey for providing me with a great working environment. Funding for this thesis was provided by a National Science Foundation, Office of Polar Programs grant to Drs Regina Eisert and Olav Oftedal. Many people have also given their time and expertise in assisting me with fieldwork, laboratory and data analysis. I thank Dr Wendy Hood, Lisa Ware, Warren Lynch and Rich Joss for their assistance in the field and for making my time in Antarctica an enjoyable experience. Michael Jakubasz (Smithsonian National Zoological Park) provided invaluable assistance during my stay at the Nutrition Lab. I thank him for his guidance on the proximate composition assays and for sorting permits and shipping details. -
Insertion Hot Spots of DIRS1 Retrotransposon and Chromosomal Diversifications Among the Antarctic Teleosts Nototheniidae
International Journal of Molecular Sciences Article Insertion Hot Spots of DIRS1 Retrotransposon and Chromosomal Diversifications among the Antarctic Teleosts Nototheniidae Juliette Auvinet 1,* , Paula Graça 1, Laura Ghigliotti 2 , Eva Pisano 2, Agnès Dettaï 3, Catherine Ozouf-Costaz 1 and Dominique Higuet 1,3,* 1 Laboratoire Evolution Paris Seine, Sorbonne Université, CNRS, Univ Antilles, Institut de Biologie Paris Seine (IBPS), F-75005 Paris, France; [email protected] (P.G.); [email protected] (C.O.-C.) 2 Istituto per lo Studio degli Impatti Antropici e la Sostenibilità in Ambiente Marino (IAS), National Research Council (CNR), 16149 Genoa, Italy; [email protected] (L.G.); [email protected] (E.P.) 3 Institut de Systématique, Evolution, Biodiversité (ISYEB), Museum National d’Histoire Naturelle, CNRS, Sorbonne Université, EPHE, 57, rue Cuvier, 75005 Paris, France; [email protected] * Correspondence: [email protected] (J.A.); [email protected] (D.H.) Received: 28 December 2018; Accepted: 3 February 2019; Published: 6 February 2019 Abstract: By their faculty to transpose, transposable elements are known to play a key role in eukaryote genomes, impacting both their structuration and remodeling. Their integration in targeted sites may lead to recombination mechanisms involved in chromosomal rearrangements. The Antarctic fish family Nototheniidae went through several waves of species radiations. It is a suitable model to study transposable element (TE)-mediated mechanisms associated to genome and chromosomal diversifications. After the characterization of Gypsy (GyNoto), Copia (CoNoto), and DIRS1 (YNoto) retrotransposons in the genomes of Nototheniidae (diversity, distribution, conservation), we focused on their chromosome location with an emphasis on the three identified nototheniid radiations (the Trematomus, the plunderfishes, and the icefishes). -
Mucosal Health in Aquaculture Page Left Intentionally Blank Mucosal Health in Aquaculture
Mucosal Health in Aquaculture Page left intentionally blank Mucosal Health in Aquaculture Edited by Benjamin H. Beck Stuttgart National Aquaculture Research Center, Stuttgart, Arkansas, USA Eric Peatman School of Fisheries, Aquaculture, and Aquatic Sciences, Auburn University, Alabama, USA AMSTERDAM • BOSTON • HEIDELBERG • LONDON • NEW YORK OXFORD • PARIS • SAN DIEGO • SAN FRANCISCO • SINGAPORE SYDNEY • TOKYO Academic Press is an Imprint of Elsevier Academic Press is an imprint of Elsevier 125, London Wall, EC2Y 5AS, UK 525 B Street, Suite 1800, San Diego, CA 92101-4495, USA 225 Wyman Street, Waltham, MA 02451, USA The Boulevard, Langford Lane, Kidlington, Oxford OX5 1GB, UK Copyright © 2015 Elsevier Inc. All rights reserved. No part of this publication may be reproduced, stored in a retrieval system or transmitted in any form or by any means electronic, mechanical, photocopying, recording or otherwise without the prior written permission of the publisher. Permissions may be sought directly from Elsevier’s Science & Technology Rights Department in Oxford, UK: phone (+44) (0) 1865 843830; fax (+44) (0) 1865 853333; email: [email protected]. Alternatively, visit the Science and Technology Books website at www.elsevierdirect.com/rights for further information. Notice No responsibility is assumed by the publisher for any injury and/or damage to persons or property as a matter of products liability, negligence or otherwise, or from any use or operation of any methods, products, instructions or ideas contained in the material herein. -
Reference Transcriptome for the High- Antarctic Cryopelagic Notothenioid Fish Pagothenia Borchgrevinki Kevin T Bilyk1,2* and C-H Christina Cheng1
Bilyk and Cheng BMC Genomics 2013, 14:634 http://www.biomedcentral.com/1471-2164/14/634 RESEARCH ARTICLE Open Access Model of gene expression in extreme cold - reference transcriptome for the high- Antarctic cryopelagic notothenioid fish Pagothenia borchgrevinki Kevin T Bilyk1,2* and C-H Christina Cheng1 Abstract Background: Among the cold-adapted Antarctic notothenioid fishes, the high-latitude bald notothen Pagothenia borchgrevinki is particularly notable as the sole cryopelagic species, exploiting the coldest and iciest waters of the Southern Ocean. Because P. borchgrevinki is a frequent model for investigating notothenioid cold-adaptation and specialization, it is imperative that “omic” tools be developed for this species. In the absence of a sequenced genome, a well annotated reference transcriptome of the bald notothen will serve as a model of gene expression in the coldest and harshest of all polar marine environments, useful for future comparative studies of cold adaptation and thermal responses in polar teleosts and ectotherms. Results: We sequenced and annotated a reference transcriptome for P. borchgrevinki, with added attention to capturing the transcriptional responses to acute and chronic heat exposures. We sequenced by Roche 454 a normalized cDNA library constructed from pooled mRNA encompassing multiple tissues taken from environmental, warm acclimating, and acute heat stressed specimens. The resulting reads were assembled into 42,620 contigs, 17,951 of which could be annotated. We utilized this annotated portion of the reference transcriptome to map short Illumina reads sequenced from the gill and liver of environmental specimens, and also compared the gene expression profiles of these two tissue transcriptomes with those from the temperate model fish Danio rerio. -
Induction of Heat Shock Proteins in Cold- Adapted and Cold
CORE Metadata, citation and similar papers at core.ac.uk Provided by ScholarWorks@UA INDUCTION OF HEAT SHOCK PROTEINS IN COLD- ADAPTED AND COLD- ACCLIMATED FISHES By Laura Elizabeth Teigen Dr. Kristin O'Brien Advisory Committee Chair Dr. Diane Wagner Chair, Department of Biology and Wildlife APPROVED: ;t.-/ INDUCTION OF HEAT SHOCK PROTEINS IN COLD- ADAPTED AND COLD- ACCLIMATED FISHES A THESIS Presented to the Faculty of the University of Alaska Fairbanks in Partial Fulfillment of the Requirements for the Degree of MASTER OF SCIENCE By Laura Elizabeth Teigen, B.A. Fairbanks, Alaska May 2014 v Abstract I examined the effects of oxidative stress and changes in temperature on heat shock protein (Hsp) levels in cold-adapted and cold-acclimated fishes. Adaptation of Antarctic notothenioids to cold temperature is correlated with high levels of Hsps, thought to minimize cold-induced protein denaturation. Hsp70 levels were measured in red- and white-blooded Antarctic notothenioid fishes exposed to their critical thermal maximum (CTMax), 4C warm acclimated, and notothenioids from different latitudes. I determined the effect of cold acclimation on Hsp levels and the role of sirtuins in regulating Hsp expression and changes in metabolism in threespine stickleback, Gasterosteus aculeatus, cold-acclimated to 8C. Levels of Hsps do not increase in Antarctic notothenioids exposed to their CTMax, and warm acclimation reduced levels of Hsp70. Hsp70 levels were higher in Antarctic notothenioids compared to a temperate notothenioid and higher in white-blooded notothenioids compared to red-blooded notothenioids, despite higher oxidative stress levels in red-blooded fish, suggesting Hsp70 does not mitigate oxidative stress. -
Mitochondrial Phylogeny of Trematomid Fishes (Nototheniidae, Perciformes) and the Evolution of Antarctic Fish
MOLECULAR PHYLOGENETICS AND EVOLUTION Vol. 5, No. 2, April, pp. 383±390, 1996 ARTICLE NO. 0033 Mitochondrial Phylogeny of Trematomid Fishes (Nototheniidae, Perciformes) and the Evolution of Antarctic Fish PETER A. RITCHIE,²,*,1,2 LUCA BARGELLONI,*,³ AXEL MEYER,*,§ JOHN A. TAYLOR,² JOHN A. MACDONALD,² AND DAVID M. LAMBERT²,2 ²School of Biological Sciences, University of Auckland, Private Bag 92019, Auckland, New Zealand; *Department of Ecology and Evolution and §Program in Genetics, State University of New York, Stony Brook, New York 11794-5245; and ³Dipartimento di Biologia, Universita di Padova, Via Trieste 75, 35121 Padua, Italy Received November 22, 1994; revised June 2, 1995 there is evidence that this may have occurred about The subfamily of ®shes Trematominae is endemic to 12±14 million years ago (MYA) (Eastman, 1993; the subzero waters of Antarctica and is part of the Bargelloni et al., 1994). larger notothenioid radiation. Partial mitochondrial There may have been a suite of factors which allowed sequences from the 12S and 16S ribosomal RNA (rRNA) the notothenioids, in particular, to evolve to such domi- genes and a phylogeny for 10 trematomid species are nance in the Southern Oceans. Several authors have presented. As has been previously suggested, two taxa, suggested that speciation within the group could have Trematomus scotti and T. newnesi, do not appear to be been the result of large-scale disruptions in the Antarc- part of the main trematomid radiation. The genus Pa- tic ecosystem during the Miocene (Clarke, 1983). The gothenia is nested within the genus Trematomus and isostatic pressure from the accumulation of ice during has evolved a unique cyropelagic existence, an associ- the early Miocene (25±15 MYA) left the continental ation with pack ice. -
Juvenile Trematomus Bernacchii and Pagothenia Brachysoma (Pisces, Nototheniidae) Within Krill Concentrations Off Balleny Islands (Antarctic)*)
POLISH POLAR RESEARCH (POL POLAR RES.) 4 1 4 57 - 69 1983 POLSKIE BADANIA POLARNE Wiesław ŚLÓSARCZYK Department of Ichthyology, Sea Fisheries Institute, al. Zjednocze- nia 1, 81-345 Gdynia, Poland Juvenile Trematomus bernacchii and Pagothenia brachysoma (Pisces, Nototheniidae) within krill concentrations off Balleny Islands (Antarctic)*) ABSTRACT: Juvenile fishes of the family Nototheniidae were recorded during fishing for krill eastwards of the Balleny Islands. The paper describes juveniles of the most abundant species. Trematomus bernacchii and Pagothenia brachysoma, their distribution and abundance. Also the correctness of assigning of some juveniles to the species T. bernacchii is discussed. Key words: Antarctic, juvenile nototheniid fish 1. Introduction Following DeWitt (1970) the dominant group of demersal Notothe- niidae of the Ross Sea are fishes belonging to the genus Trematomus. Among them T. bernacchii is considered as one of the most frequent and widely distributed species (Andrjasev 1964). Pagothenia brachysoma belongs to the cryopelagic fauna of that region (Andrjasev 1968, 1970 — cited as Trematomus brachysoma). The literature dealing with juvenile No- totheniidae of the Ross Sea is rather scarce. Some reference to the juveniles of species mentioned above is given by Miller (1961), Andrjasev (1967, 1970), DeWitt (1970), Andrjasev and Jakubowski (1971) and Baluśkin (1976a). Apart from the Ross Sea, only nine species, out of 51 Nototheniids living in the Antarctic, have been described in the developmental stages (Regan 1916, Everson 1968, Hureau 1970, Efremenko 1979). Investigations of juvenile ichthyofauna within the krill concentrations off the Balleny Islands were carried out in 1978, during the circumantarctic expedition of the r/v "Profesor Bogucki". One of the objectives of the study *) This work was performed as part of the problem MR-II-16 58 Wiesław Slósarczyk was to draw attention to the necessity of protecting juvenile fish under the conditions of a rapidly developing krill fishery. -
Evaluation of Thermal Stress in Tropical Marine Organisms in the Context of Climate Warming
UNIVERSIDADE DE LISBOA FACULDADE DE CIÊNCIAS Evaluation of thermal stress in tropical marine organisms in the context of climate warming Doutoramento em Biologia Especialidade em Biologia Marinha e Aquacultura Sara Carolina Gusmão Coito Madeira Tese orientada por: Doutora Catarina Vinagre Professor Doutor Mário Diniz Professor Doutor Henrique Cabral Documento especialmente elaborado para a obtenção do grau de doutor 2018 2018 UNIVERSIDADE DE LISBOA FACULDADE DE CIÊNCIAS Evaluation of thermal stress in tropical marine organisms in the context of climate warming Doutoramento em Biologia Especialidade em Biologia Marinha e Aquacultura Sara Carolina Gusmão Coito Madeira Tese orientada por: Doutora Catarina Vinagre Professor Doutor Mário Diniz Professor Doutor Henrique Cabral Documento especialmente elaborado para a obtenção do grau de doutor 2018 2018 UNIVERSIDADE DE LISBOA FACULDADE DE CIÊNCIAS Evaluation of thermal stress in tropical marine organisms in the context of climate warming Doutoramento em Biologia Especialidade em Biologia Marinha e Aquacultura Sara Carolina Gusmão Coito Madeira Tese orientada por: Doutora Catarina Vinagre Professor Doutor Mário Diniz Professor Doutor Henrique Cabral Júri: Presidente: ● Doutora Maria Manuela Gomes Coelho de Noronha Trancoso, Professora Catedrática e Membro do Conselho Científico, Faculdade de Ciências da Universidade de Lisboa Vogais: ● Doutor Luís Miguel dos Santos Russo Vieira, Investigador Auxiliar, Centro Interdisciplinar de Investigação Marinha e Ambiental (CIIMAR) da Universidade do Porto -
THREE PINNIPED SPECIES, by Susan D. Inglis, MS a Dissertation
Dietary effects on protein turnover in three pinniped species, Eumetopias jubatus, Phoca vitulina, and Leptonychotes weddellii Item Type Thesis Authors Inglis, Susan D. Download date 11/10/2021 13:32:47 Link to Item http://hdl.handle.net/11122/10505 DIETARY EFFECTS ON PROTEIN TURNOVER IN THREE PINNIPED SPECIES, EUMETOPIAS JUBATUS, PHOCA VITULINA, AND LEPTONYCHOTES WEDDELLII By Susan D. Inglis, MS A Dissertation Submitted in Partial Fulfillment of the Requirements for the Degree of Doctor of Philosophy in Marine Biology University of Alaska Fairbanks May 2019 ©2019 Susan D. Inglis APPROVED: Michael Castellini, Committee Chair Shannon Atkinson, Committee Member Perry Barboza, Committee Member James Carpenter, Committee Member Lorrie Rea, Committee Member Matthew Wooller, Chair Department of Marine Biology Bradley S. Moran, Dean College of Fisheries and Ocean Sciences Michael Castellini, Dean of the Graduate School Abstract The role of dietary protein in pinniped (seal and sea lion) nutrition is poorly understood. Although these marine mammals derive the majority of their daily energetic needs from lipid, lipids cannot supply essential amino acids which have to come from protein fractions of the diet. Protein regulation is vital for cellular maintenance, molt, fasting metabolism, exercise and development. Proteins are composed of linked amino acids (AA), and net protein turnover is the balance between protein synthesis from component AA, and degradation back to AA. Protein regulation is influenced by dietary intake and quality, as well as physiological and metabolic requirements. In this work, pinniped diet quality was assessed through comparisons of amino acid profiles between maternal milk, blood serum, and seasonal prey of wild juvenile Steller sea lions (Eumetopias jubatus) in Southcentral Alaska. -
The Importance of Antarctic Toothfish As Prey of Weddell Seals in the Ross
Antarctic Science 21(4), 317–327 (2009) & Antarctic Science Ltd 2009 doi:10.1017/S0954102009001953 Review The importance of Antarctic toothfish as prey of Weddell seals in the Ross Sea DAVID G. AINLEY1* and DONALD B. SINIFF2 1HT Harvey & Associates, Los Gatos, CA 95032, USA 2Department of Ecology, Evolution and Behavioral Biology, University of Minnesota, St Paul, MN 55108, USA *[email protected] Abstract: Uncertainty exists over the importance of Antarctic toothfish (Dissostichus mawsoni) as prey of top predators in the Ross Sea. In this paper we assess relative weight given to direct, observational evidence of prey taken, as opposed to indirect evidence from scat and biochemical analysis, and conclude that toothfish are important to Weddell seals (Leptonychotes weddellii). The seals eat only the flesh of large toothfish and therefore they are not detected in scat or stomach samples; biochemical samples have been taken from seal sub-populations where toothfish seldom occur. Using direct observations of non-breeding seals away from breeding haulouts in McMurdo Sound, 0.8–1.3 toothfish were taken per day. Based on these and other data, the non-breeding portion of the McMurdo Sound seal population, during spring and summer, consume about 52 tonnes of toothfish. Too many unknowns exist to estimate the non-trivial amount consumed by breeders. We discuss why reduced toothfish availability to Weddell seals, for energetic reasons, cannot be compensated by a switch to silverfish (Pleuragramma antarcticum) or squid. The Ross Sea toothfish fishery should be reduced including greater spatial management, with monitoring of Weddell seal populations by CCAMLR. Otherwise, probable cascades will lead to dramatic changes in the populations of charismatic megafauna. -
Biogeographic Atlas of the Southern Ocean
Census of Antarctic Marine Life SCAR-Marine Biodiversity Information Network BIOGEOGRAPHIC ATLAS OF THE SOUTHERN OCEAN CHAPTER 7. BIOGEOGRAPHIC PATTERNS OF FISH. Duhamel G., Hulley P.-A, Causse R., Koubbi P., Vacchi M., Pruvost P., Vigetta S., Irisson J.-O., Mormède S., Belchier M., Dettai A., Detrich H.W., Gutt J., Jones C.D., Kock K.-H., Lopez Abellan L.J., Van de Putte A.P., 2014. In: De Broyer C., Koubbi P., Griffiths H.J., Raymond B., Udekem d’Acoz C. d’, et al. (eds.). Biogeographic Atlas of the Southern Ocean. Scientific Committee on Antarctic Research, Cambridge, pp. 328-362. EDITED BY: Claude DE BROYER & Philippe KOUBBI (chief editors) with Huw GRIFFITHS, Ben RAYMOND, Cédric d’UDEKEM d’ACOZ, Anton VAN DE PUTTE, Bruno DANIS, Bruno DAVID, Susie GRANT, Julian GUTT, Christoph HELD, Graham HOSIE, Falk HUETTMANN, Alexandra POST & Yan ROPERT-COUDERT SCIENTIFIC COMMITTEE ON ANTARCTIC RESEARCH THE BIOGEOGRAPHIC ATLAS OF THE SOUTHERN OCEAN The “Biogeographic Atlas of the Southern Ocean” is a legacy of the International Polar Year 2007-2009 (www.ipy.org) and of the Census of Marine Life 2000-2010 (www.coml.org), contributed by the Census of Antarctic Marine Life (www.caml.aq) and the SCAR Marine Biodiversity Information Network (www.scarmarbin.be; www.biodiversity.aq). The “Biogeographic Atlas” is a contribution to the SCAR programmes Ant-ECO (State of the Antarctic Ecosystem) and AnT-ERA (Antarctic Thresholds- Ecosys- tem Resilience and Adaptation) (www.scar.org/science-themes/ecosystems). Edited by: Claude De Broyer (Royal Belgian Institute