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Thymelaeaceae)
Origin and diversification of the Australasian genera Pimelea and Thecanthes (Thymelaeaceae) by MOLEBOHENG CYNTHIA MOTS! Thesis submitted in fulfilment of the requirements for the degree PHILOSOPHIAE DOCTOR in BOTANY in the FACULTY OF SCIENCE at the UNIVERSITY OF JOHANNESBURG Supervisor: Dr Michelle van der Bank Co-supervisors: Dr Barbara L. Rye Dr Vincent Savolainen JUNE 2009 AFFIDAVIT: MASTER'S AND DOCTORAL STUDENTS TO WHOM IT MAY CONCERN This serves to confirm that I Moleboheng_Cynthia Motsi Full Name(s) and Surname ID Number 7808020422084 Student number 920108362 enrolled for the Qualification PhD Faculty _Science Herewith declare that my academic work is in line with the Plagiarism Policy of the University of Johannesburg which I am familiar. I further declare that the work presented in the thesis (minor dissertation/dissertation/thesis) is authentic and original unless clearly indicated otherwise and in such instances full reference to the source is acknowledged and I do not pretend to receive any credit for such acknowledged quotations, and that there is no copyright infringement in my work. I declare that no unethical research practices were used or material gained through dishonesty. I understand that plagiarism is a serious offence and that should I contravene the Plagiarism Policy notwithstanding signing this affidavit, I may be found guilty of a serious criminal offence (perjury) that would amongst other consequences compel the UJ to inform all other tertiary institutions of the offence and to issue a corresponding certificate of reprehensible academic conduct to whomever request such a certificate from the institution. Signed at _Johannesburg on this 31 of _July 2009 Signature Print name Moleboheng_Cynthia Motsi STAMP COMMISSIONER OF OATHS Affidavit certified by a Commissioner of Oaths This affidavit cordons with the requirements of the JUSTICES OF THE PEACE AND COMMISSIONERS OF OATHS ACT 16 OF 1963 and the applicable Regulations published in the GG GNR 1258 of 21 July 1972; GN 903 of 10 July 1998; GN 109 of 2 February 2001 as amended. -
Poaceae: Bambusoideae) Christopher Dean Tyrrell Iowa State University
Iowa State University Capstones, Theses and Retrospective Theses and Dissertations Dissertations 2008 Systematics of the neotropical woody bamboo genus Rhipidocladum (Poaceae: Bambusoideae) Christopher Dean Tyrrell Iowa State University Follow this and additional works at: https://lib.dr.iastate.edu/rtd Part of the Botany Commons Recommended Citation Tyrrell, Christopher Dean, "Systematics of the neotropical woody bamboo genus Rhipidocladum (Poaceae: Bambusoideae)" (2008). Retrospective Theses and Dissertations. 15419. https://lib.dr.iastate.edu/rtd/15419 This Thesis is brought to you for free and open access by the Iowa State University Capstones, Theses and Dissertations at Iowa State University Digital Repository. It has been accepted for inclusion in Retrospective Theses and Dissertations by an authorized administrator of Iowa State University Digital Repository. For more information, please contact [email protected]. Systematics of the neotropical woody bamboo genus Rhipidocladum (Poaceae: Bambusoideae) by Christopher Dean Tyrrell A thesis submitted to the graduate faculty in partial fulfillment of the requirements for the degree of MASTER OF SCIENCE Major: Ecology and Evolutionary Biology Program of Study Committee: Lynn G. Clark, Major Professor Dennis V. Lavrov Robert S. Wallace Iowa State University Ames, Iowa 2008 Copyright © Christopher Dean Tyrrell, 2008. All rights reserved. 1457571 1457571 2008 ii In memory of Thomas D. Tyrrell Festum Asinorum iii TABLE OF CONTENTS ABSTRACT iv CHAPTER 1. GENERAL INTRODUCTION 1 Background and Significance 1 Research Objectives 5 Thesis Organization 6 Literature Cited 6 CHAPTER 2. PHYLOGENY OF THE BAMBOO SUBTRIBE 9 ARTHROSTYLIDIINAE WITH EMPHASIS ON RHIPIDOCLADUM Abstract 9 Introduction 10 Methods and Materials 13 Results 19 Discussion 25 Taxonomic Treatment 26 Literature Cited 31 CHAPTER 3. -
De Novo Transcriptome Sequencing in Bixa Orellana to Identify Genes Involved in Methylerythritol Phosphate, Carotenoid and Bixin Biosynthesis
UC Davis UC Davis Previously Published Works Title De novo transcriptome sequencing in Bixa orellana to identify genes involved in methylerythritol phosphate, carotenoid and bixin biosynthesis. Permalink https://escholarship.org/uc/item/09j257mk Journal BMC genomics, 16(1) ISSN 1471-2164 Authors Cárdenas-Conejo, Yair Carballo-Uicab, Víctor Lieberman, Meric et al. Publication Date 2015-10-28 DOI 10.1186/s12864-015-2065-4 Peer reviewed eScholarship.org Powered by the California Digital Library University of California De novo transcriptome sequencing in Bixa orellana to identify genes involved in methylerythritol phosphate, carotenoid and bixin biosynthesis Cárdenas-Conejo et al. BMC Genomics (2015) 16:877 DOI 10.1186/s12864-015-2065-4 Cárdenas-Conejo et al. BMC Genomics (2015) 16:877 DOI 10.1186/s12864-015-2065-4 RESEARCH ARTICLE Open Access De novo transcriptome sequencing in Bixa orellana to identify genes involved in methylerythritol phosphate, carotenoid and bixin biosynthesis Yair Cárdenas-Conejo1, Víctor Carballo-Uicab1, Meric Lieberman2, Margarita Aguilar-Espinosa1, Luca Comai2 and Renata Rivera-Madrid1* Abstract Background: Bixin or annatto is a commercially important natural orange-red pigment derived from lycopene that is produced and stored in seeds of Bixa orellana L. An enzymatic pathway for bixin biosynthesis was inferred from homology of putative proteins encoded by differentially expressed seed cDNAs. Some activities were later validated in a heterologous system. Nevertheless, much of the pathway remains to be clarified. For example, it is essential to identify the methylerythritol phosphate (MEP) and carotenoid pathways genes. Results: In order to investigate the MEP, carotenoid, and bixin pathways genes, total RNA from young leaves and two different developmental stages of seeds from B. -
Hybrids in Chamaedorea D,Q,Vdbannv, Jn
19671 BARRY:HYBRIDS r21 Endemic to Cuba, where found on longer and stouter prickles, the upper calcareous soils in all the provinces margins fibrous and extending along according to Le6n, Flora d,e Cuba I: the petiole nearly to the first pinnae, 245. 1946. the free portion of the petiole about 45 cm. (18 in.) long with brown or yel- cRISpA(Humboldt, Bon- Glsrnococos lowish prickles, some very stoutI ra- E. Moore, lr. pland & Kunth) H. chis more than 2.5 m. (87/z ft.) long, noa. often with short yellowish prickles along Cocos crispa Humboldt, BonPland & the lower margin and on the lower sur- Kunth, Nova Genera et SPecies face near the junction with the petiole; Plantarum 1:302 f{olio 242]- pinnae to 120 or more on each side of 1816. the rachis, the lower onesshort, narrow, Acrocornia crispo (Humboldt, Bon- and closely placed, those in the center pland & Kunth) C. F. Baker ex to f m. (3r/2fi.) Iong, 3 cm. (1 3/16 Beccari, in Pomona College Jour' itt.) wide, the midnerve gr€en, the nal of Economic Botany 2: 364. lower surface pale. Inflorescenceto 1.5 I9T2. m. (5 ft.) long or more, the upper bract Gastrococosarrnentalis S. A. Morales, brown tomentosel peduncle about 7'5 in Repertorio Fisico-Natural de la dm. (.27/z ft.) long, densely brown Isla de Cuba I: 58. 1865. or yellowish prickly; rachis about as Acrocomia armentalis (S. A. Mora- long as peduncle,smooth or with prick' les) L. H. Bailey, Hortus Second les at base; rachillaeto 30 cm. -
Alfred Traverse
DR. PUGH'S HERBARIUM Alfred Traverse Curator ofPAC, Emeritus Professor ofPalynology Departments of Biology and Geosciences The Pennsylvania State University University Park, Pennsylvania 16802, U.S.A. [email protected] ABSTRACT bvan Pugh, a younj^and lalenced agricuhurat chemist from Pennsylvania, producfd imporiam discoveries on the role of plants in the fixa• tion of atmospheric nitrogen during three years of study and research, conducted in England from 1856-59. He then returned home as the first president of what is now the Pennsylvania .State University, not only ihe youngest, hut alsti the most talented president the inslilution has ever had. .Arriving in 1859 to take up his new duties, he brought with him plant specimens he had collected during a several months' visit to the Heidelberg area of dermany in 1856. and also much of the herbarium of Professor G.W. Bischttff of Heidelberg, which hcboughl while there. It is clear that Pugh wanted the new college to become an important center for agricultural research and thought a herbarium was an essential asset for such research, Pugh died in 1864, but W.A. Buckhout, a student of Asa ("irayat Harvard, look over botany, horlicullure and the responsibility for the Pugh herbarium al rVun Stale in 1872, The intimate connection belweeii thai herbarium and the founding of a university is uni(]tie. RESUMFN Evan Pugh, un inlellgente joven quimieo agricola de Pensilvania, produjo imporianles descuhrimieiilos en el papel se las planias en la fi- Jacion del nitrogeno aimosferico en tres anos de csiudio e invcsiigacion, realizada en Inglalerra duranic 1856-59, Hntonces regresti como el primer presidente de lo C|Ue ahora es la Universidad Esiatal de Pensilvania, sicildo no solo el mas joven, sino tambien el presidenie mas in- icligente que la inslilucion haya lenido. -
Arizona Landscape Palms
Cooperative Extension ARIZONA LANDSCAPE PALMS ELIZABETH D AVISON Department of Plant Sciences JOHN BEGEMAN Pima County Cooperative Extension AZ1021 • 12/2000 Issued in furtherance of Cooperative Extension work acts of May 8 and June 30, 1914, in cooperation with the U.S. Department of Agriculture, James A. Christenson, Director, Cooperative Extension, College of Agriculture and Life Sciences, The University of Arizona. The University of Arizona College of Agriculture and Life Sciences is an equal opportunity employer authorized to provide research, educational information and other services to individuals and institutions that function without regard to sex, race, religion, color, national origin, age, Vietnam Era Veteran's status, or disability. Contents Landscape Use ......................................... 3 Adaptation ................................................ 3 Planting Palms ......................................... 3 Care of Established Palms...................... 5 Diseases and Insect Pests ....................... 6 Palms for Arizona .................................... 6 Feather Palms ........................................... 8 Fan Palms................................................ 12 Palm-like Plants ..................................... 16 This information has been reviewed by university faculty. ag.arizona.edu/pubs/garden/az1121.pdf 2 The luxuriant tropical appearance and stately Adaptation silhouette of palms add much to the Arizona landscape. Palms generally can be grown below the 4000 ft level Few other plants are as striking in low and mid elevation in Arizona. However, microclimate may make the gardens. Although winter frosts and low humidity limit difference between success and failure in a given location. the choices somewhat, a good number of palms are Frost pockets, where nighttime cold air tends to collect, available, ranging from the dwarf Mediterranean Fan should be avoided, especially for the tender species. Palms palm to the massive Canary Island Date palm. -
Poaceae: Bambusoideae) Lynn G
Aliso: A Journal of Systematic and Evolutionary Botany Volume 23 | Issue 1 Article 26 2007 Phylogenetic Relationships Among the One- Flowered, Determinate Genera of Bambuseae (Poaceae: Bambusoideae) Lynn G. Clark Iowa State University, Ames Soejatmi Dransfield Royal Botanic Gardens, Kew, UK Jimmy Triplett Iowa State University, Ames J. Gabriel Sánchez-Ken Iowa State University, Ames Follow this and additional works at: http://scholarship.claremont.edu/aliso Part of the Botany Commons, and the Ecology and Evolutionary Biology Commons Recommended Citation Clark, Lynn G.; Dransfield, Soejatmi; Triplett, Jimmy; and Sánchez-Ken, J. Gabriel (2007) "Phylogenetic Relationships Among the One-Flowered, Determinate Genera of Bambuseae (Poaceae: Bambusoideae)," Aliso: A Journal of Systematic and Evolutionary Botany: Vol. 23: Iss. 1, Article 26. Available at: http://scholarship.claremont.edu/aliso/vol23/iss1/26 Aliso 23, pp. 315–332 ᭧ 2007, Rancho Santa Ana Botanic Garden PHYLOGENETIC RELATIONSHIPS AMONG THE ONE-FLOWERED, DETERMINATE GENERA OF BAMBUSEAE (POACEAE: BAMBUSOIDEAE) LYNN G. CLARK,1,3 SOEJATMI DRANSFIELD,2 JIMMY TRIPLETT,1 AND J. GABRIEL SA´ NCHEZ-KEN1,4 1Department of Ecology, Evolution and Organismal Biology, Iowa State University, Ames, Iowa 50011-1020, USA; 2Herbarium, Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3AE, UK 3Corresponding author ([email protected]) ABSTRACT Bambuseae (woody bamboos), one of two tribes recognized within Bambusoideae (true bamboos), comprise over 90% of the diversity of the subfamily, yet monophyly of -
Molecular Phylogeny of the Arthrostylidioid Bamboos (Poaceae: Bambusoideae: Bambuseae: Arthrostylidiinae) and New Genus Didymogonyx ⇑ Christopher D
Molecular Phylogenetics and Evolution 65 (2012) 136–148 Contents lists available at SciVerse ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Molecular phylogeny of the arthrostylidioid bamboos (Poaceae: Bambusoideae: Bambuseae: Arthrostylidiinae) and new genus Didymogonyx ⇑ Christopher D. Tyrrell a, , Ana Paula Santos-Gonçalves b, Ximena Londoño c, Lynn G. Clark a a Dept. of Ecology, Evolution and Organismal Biology, Iowa State University, 251 Bessey Hall, Ames, IA 50011, USA b Universidade Federal de Viçosa, Departamento de Biologia Vegetal, CCB2, Viçosa, 36570-000 Minas Gerais, Brazil c Instituto Vallecaucano de Investigaciones Cientificas (INCIVA), AA 11574, Cali, Colombia article info abstract Article history: We present the first multi-locus chloroplast phylogeny of Arthrostylidiinae, a subtribe of neotropical Received 17 January 2012 woody bamboos. The morphological diversity of Arthrostylidiinae makes its taxonomy difficult and prior Revised 18 May 2012 molecular analyses of bamboos have lacked breadth of sampling within the subtribe, leaving internal Accepted 29 May 2012 relationships uncertain. We sampled 51 taxa, chosen to span the range of taxonomic diversity and mor- Available online 6 June 2012 phology, and analyzed a combined chloroplast DNA dataset with six chloroplast regions: ndhF, trnD-trnT, trnC-rpoB, rps16-trnQ, trnT-trnL, and rpl16. A consensus of maximum parsimony and Bayesian inference Keywords: analyses reveals monophyly of the Arthrostylidiinae and four moderately supported lineages within it. Arthrostylidiinae Six previously recognized genera were monophyletic, three polyphyletic, and two monotypic; Rhipido- Woody bamboo Chloroplast markers cladum sect. Didymogonyx is here raised to generic status. When mapped onto our topology, many of Didymogonyx the morphological characters show homoplasy. -
Ecological Aspects of the Interaction Between Chamaedorea Tepejilote, A
B6 PRINCIPES [Vor. 35 Principes,35(2), 1991, pp. 86 93 EcologicalAspects of the Interaction between Chamaedoreatepejilote, a DioeciousPalm and Calyptocephalamarginipennis, a Herbivorous Beetle, in a Mexican Rain Forest K. Oveue.* ANDR. DIRZo Centro d.eEcol.osia, WAM, Apartado Postal 7O-275, M6xico, 04510, D.F. Assrnecr ers have made studies regarding intraspe- cific differencesin herbivory in the context Liebm. ex Mart., an Chamaedorea tepejilote of polymorphic plant systemsin temperate abundant dioeciouspalm in the lowland rain forest of Los Tuxtlas (SoutheastMexico), typically bears evi- zones(e.g., Jones 1966, Cates1975, Dirzo dence of leaf damage by Calyptocephala margini- and Harper I982a). Dioecy constitutes pennis Bohem. (Chrysomelidae).The beetles mark- one of the most common polymorphic sys- edly prefer this palm in comparison to other plants tems, particularly in some Neotropical on this site, including other sympatric speciesin the same genus. Additionally, beetlesshowed some mar- communities(Croat 1979, Bawa and Opler ginal preference for the foliage of female plants under 1975, Bawa 1980, Flores and Schemske experimental and field conditions. Sex-related phy- 1984, Bawa et al. 1985). Suggestionin tochemical attributes of the palm, such as secondary the literature of sex-baseddifferences in and nutritional characteristicsof the foli- comoounds herbivory include male inflorescencessuf- age, did not differ markedly between sexes and did not seemto be the proximal causesof the inter-sexual fering higher levels of predation than female differences in herbivory. Thus, the hypothesis that inflorescences(Fryxell and Lulcefahr1967, differencesin resourceallocation to defenseand nutri Bawa and Opler 1978) and casesin which tional quality, resulting from sex-related differential herbivores preferentially feed either on allocation to reproduction, is not supported by this study. -
The Global Museum: Natural History Collections and the Future of Evolutionary Science and Public Education
A peer-reviewed version of this preprint was published in PeerJ on 28 January 2020. View the peer-reviewed version (peerj.com/articles/8225), which is the preferred citable publication unless you specifically need to cite this preprint. Bakker FT, Antonelli A, Clarke JA, Cook JA, Edwards SV, Ericson PGP, Faurby S, Ferrand N, Gelang M, Gillespie RG, Irestedt M, Lundin K, Larsson E, Matos- Maraví P, Müller J, von Proschwitz T, Roderick GK, Schliep A, Wahlberg N, Wiedenhoeft J, Källersjö M. 2020. The Global Museum: natural history collections and the future of evolutionary science and public education. PeerJ 8:e8225 https://doi.org/10.7717/peerj.8225 The Global Museum: natural history collections and the future of evolutionary biology and public education Freek T. Bakker Corresp., 1 , Alexandre Antonelli 2 , Julia Clarke 3 , Joseph A Cook 4 , Scott V Edwards 5 , Per GP Ericson 6 , Søren Faurby 7 , Nuno Ferrand 8 , Magnus Gelang 9 , Rosemary G Gillespie 10 , Martin Irestedt 6 , Kennet Lundin 9 , Ellen Larsson 7 , Pável Matos-Maraví 11 , Johannes Müller 12 , Ted von Proschwitz 9 , George K Roderick 10 , Alexander Schliep 13 , Niklas Wahlberg 14 , John Wiedenhoeft 13 , Mari Källersjö 15 1 Biosystematics Group, Wageningen University and Research, Wageningen, Netherlands 2 Department of Science, Royal Botanic Gardens, Kew, Richmond, United Kingdom 3 Jackson School of Geosciences, University of Texas at Austin, Austin, Texas, United States 4 Museum of Southwestern Biology, Department of Biology, University of New Mexico, Albuquerque, New Mexico, United States 5 Department of Organismic and Evolutionary Biology, Museum of Comparative Zoology, Harvard University, Cambridge, Massachusetts, United States 6 Dept. -
University of Copenhagen, 1353 Copenhagen, Denmark
Molecular phylogeny of Edraianthus (Grassy Bells; Campanulaceae) based on non- coding plastid DNA sequences Stefanovic, Sasa; Lakusic, Dmitar; Kuzmina, Maria; Mededovic, Safer; Tan, Kit; Stevanovic, Vladimir Published in: Taxon Publication date: 2008 Document version Publisher's PDF, also known as Version of record Citation for published version (APA): Stefanovic, S., Lakusic, D., Kuzmina, M., Mededovic, S., Tan, K., & Stevanovic, V. (2008). Molecular phylogeny of Edraianthus (Grassy Bells; Campanulaceae) based on non-coding plastid DNA sequences. Taxon, 57(2), 452-475. Download date: 02. okt.. 2021 Stefanović & al. • Phylogeny of Edraianthus TAXON 57 (2) • May 2008: 452–475 Molecular phylogeny of Edraianthus (Grassy Bells; Campanulaceae) based on non-coding plastid DNA sequences Saša Stefanović1*, Dmitar Lakušić2, Maria Kuzmina1, Safer Međedović3, Kit Tan4 & Vladimir Stevanović2 1 Department of Biology, University of Toronto at Mississauga, Mississauga, Ontario L5L 1C6, Canada. *[email protected] (author for correspondence) 2 Institute of Botany and Botanical Garden “Jevremovac”, Faculty of Biology, University of Belgrade, 11000 Belgrade, Serbia 3 University of Sarajevo, Faculty of Forestry, 71000 Sarajevo, Bosnia and Herzegovina 4 Institute of Biology, University of Copenhagen, 1353 Copenhagen, Denmark The Balkan Peninsula is known as an ice-age refugium and an area with high rates of speciation and diversifi- cation. Only a few genera have their centers of distribution in the Balkans and the endemic genus Edraianthus is one of its most prominent groups. As such, Edraianthus is an excellent model not only for studying specia- tion processes and genetic diversity but also for testing hypotheses regarding biogeography, identification and characterization of refugia, as well as post-glacial colonization and migration dynamics in SE Europe. -
IUCN Policy Statement on Research Involving Species at Risk of Extinction”, with Special Reference to Scientific Collecting of Threatened Species
Guidelines on the Implementation of the “IUCN Policy Statement on Research Involving Species at Risk of Extinction”, with special reference to Scientific Collecting of Threatened Species Version 1.0 (July 2011) [updated October 2016] This is Annex 2 of the “Guidelines for Appropriate Uses of IUCN Red List Data. Incorporating, as Annexes, the 1) Guidelines for Reporting on Proportion Threatened (ver. 1.1); 2) Guidelines on Scientific Collecting of Threatened Species (ver. 1.0); and 3) Guidelines for the Appropriate Use of the IUCN Red List by Business (ver1.0). Version 3.0” Adopted by the IUCN Red List Committee in October 2016. THE IUCN RED LIST OF THREATENED SPECIES™ Guidelines on the Implementation of the “IUCN Policy Statement on Research Involving Species at Risk of Extinction”1, with special reference to Scientific Collecting of Threatened Species (Version 1.0) The IUCN Policy Statement on Research Involving Species at Risk of Extinction2 was approved at the 27th Meeting of IUCN Council, June 1989, and encourages basic and applied research on threatened species that contributes to the likelihood of their survival. The current guidelines were called for in Resolution 3.013 "The Uses of the IUCN Red List of Threatened Species" of the 3rd World Conservation Congress in Bangkok in 2004, and Resolution 4.015 “Guidelines regarding research and scientific collecting of threatened species" of the 4th World Conservation Congress in Barcelona in 2008. These motions were tabled in response to an awareness that a) some governments are prohibiting the scientific collection of species included in the IUCN Red List and which may, in turn, be detrimental to the conservation of those particular species; and b) that many scientists are increasingly reluctant to provide data to the Red List process, due to the risk that the listing of a species in one of the threat categories will, in some cases, lead to government restrictions on scientific collecting or a requirement for expensive research permits.