The Osteology and Relationships of the Embiotocidae (Pisces)
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The 2014 Golden Gate National Parks Bioblitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event
National Park Service U.S. Department of the Interior Natural Resource Stewardship and Science The 2014 Golden Gate National Parks BioBlitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event Natural Resource Report NPS/GOGA/NRR—2016/1147 ON THIS PAGE Photograph of BioBlitz participants conducting data entry into iNaturalist. Photograph courtesy of the National Park Service. ON THE COVER Photograph of BioBlitz participants collecting aquatic species data in the Presidio of San Francisco. Photograph courtesy of National Park Service. The 2014 Golden Gate National Parks BioBlitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event Natural Resource Report NPS/GOGA/NRR—2016/1147 Elizabeth Edson1, Michelle O’Herron1, Alison Forrestel2, Daniel George3 1Golden Gate Parks Conservancy Building 201 Fort Mason San Francisco, CA 94129 2National Park Service. Golden Gate National Recreation Area Fort Cronkhite, Bldg. 1061 Sausalito, CA 94965 3National Park Service. San Francisco Bay Area Network Inventory & Monitoring Program Manager Fort Cronkhite, Bldg. 1063 Sausalito, CA 94965 March 2016 U.S. Department of the Interior National Park Service Natural Resource Stewardship and Science Fort Collins, Colorado The National Park Service, Natural Resource Stewardship and Science office in Fort Collins, Colorado, publishes a range of reports that address natural resource topics. These reports are of interest and applicability to a broad audience in the National Park Service and others in natural resource management, including scientists, conservation and environmental constituencies, and the public. The Natural Resource Report Series is used to disseminate comprehensive information and analysis about natural resources and related topics concerning lands managed by the National Park Service. -
CHECKLIST and BIOGEOGRAPHY of FISHES from GUADALUPE ISLAND, WESTERN MEXICO Héctor Reyes-Bonilla, Arturo Ayala-Bocos, Luis E
ReyeS-BONIllA eT Al: CheCklIST AND BIOgeOgRAphy Of fISheS fROm gUADAlUpe ISlAND CalCOfI Rep., Vol. 51, 2010 CHECKLIST AND BIOGEOGRAPHY OF FISHES FROM GUADALUPE ISLAND, WESTERN MEXICO Héctor REyES-BONILLA, Arturo AyALA-BOCOS, LUIS E. Calderon-AGUILERA SAúL GONzáLEz-Romero, ISRAEL SáNCHEz-ALCántara Centro de Investigación Científica y de Educación Superior de Ensenada AND MARIANA Walther MENDOzA Carretera Tijuana - Ensenada # 3918, zona Playitas, C.P. 22860 Universidad Autónoma de Baja California Sur Ensenada, B.C., México Departamento de Biología Marina Tel: +52 646 1750500, ext. 25257; Fax: +52 646 Apartado postal 19-B, CP 23080 [email protected] La Paz, B.C.S., México. Tel: (612) 123-8800, ext. 4160; Fax: (612) 123-8819 NADIA C. Olivares-BAñUELOS [email protected] Reserva de la Biosfera Isla Guadalupe Comisión Nacional de áreas Naturales Protegidas yULIANA R. BEDOLLA-GUzMáN AND Avenida del Puerto 375, local 30 Arturo RAMíREz-VALDEz Fraccionamiento Playas de Ensenada, C.P. 22880 Universidad Autónoma de Baja California Ensenada, B.C., México Facultad de Ciencias Marinas, Instituto de Investigaciones Oceanológicas Universidad Autónoma de Baja California, Carr. Tijuana-Ensenada km. 107, Apartado postal 453, C.P. 22890 Ensenada, B.C., México ABSTRACT recognized the biological and ecological significance of Guadalupe Island, off Baja California, México, is Guadalupe Island, and declared it a Biosphere Reserve an important fishing area which also harbors high (SEMARNAT 2005). marine biodiversity. Based on field data, literature Guadalupe Island is isolated, far away from the main- reviews, and scientific collection records, we pres- land and has limited logistic facilities to conduct scien- ent a comprehensive checklist of the local fish fauna, tific studies. -
Odia: Dhudhiya Magara / Sorrah Magara / Haladia Magara
FISH AND SHELLFISH DIVERSITY AND ITS SUSTAINABLE MANAGEMENT IN CHILIKA LAKE V. R. Suresh, S. K. Mohanty, R. K. Manna, K. S. Bhatta M. Mukherjee, S. K. Karna, A. P. Sharma, B. K. Das A. K. Pattnaik, Susanta Nanda & S. Lenka 2018 ICAR- Central Inland Fisheries Research Institute Barrackpore, Kolkata - 700 120 (India) & Chilika Development Authority C- 11, BJB Nagar, Bhubaneswar- 751 014 (India) FISH AND SHELLFISH DIVERSITY AND ITS SUSTAINABLE MANAGEMENT IN CHILIKA LAKE V. R. Suresh, S. K. Mohanty, R. K. Manna, K. S. Bhatta, M. Mukherjee, S. K. Karna, A. P. Sharma, B. K. Das, A. K. Pattnaik, Susanta Nanda & S. Lenka Photo editing: Sujit Choudhury and Manavendra Roy ISBN: 978-81-938914-0-7 Citation: Suresh, et al. 2018. Fish and shellfish diversity and its sustainable management in Chilika lake, ICAR- Central Inland Fisheries Research Institute, Barrackpore, Kolkata and Chilika Development Authority, Bhubaneswar. 376p. Copyright: © 2018. ICAR-Central Inland Fisheries Research Institute (CIFRI), Barrackpore, Kolkata and Chilika Development Authority, C-11, BJB Nagar, Bhubaneswar. Reproduction of this publication for educational or other non-commercial purposes is authorized without prior written permission from the copyright holders provided the source is fully acknowledged. Reproduction of this publication for resale or other commercial purposes is prohibited without prior written permission from the copyright holders. Photo credits: Sujit Choudhury, Manavendra Roy, S. K. Mohanty, R. K. Manna, V. R. Suresh, S. K. Karna, M. Mukherjee and Abdul Rasid Published by: Chief Executive Chilika Development Authority C-11, BJB Nagar, Bhubaneswar-751 014 (Odisha) Cover design by: S. K. Mohanty Designed and printed by: S J Technotrade Pvt. -
Environmental DNA Reveals the Fine-Grained and Hierarchical
www.nature.com/scientificreports OPEN Environmental DNA reveals the fne‑grained and hierarchical spatial structure of kelp forest fsh communities Thomas Lamy 1,2*, Kathleen J. Pitz 3, Francisco P. Chavez3, Christie E. Yorke1 & Robert J. Miller1 Biodiversity is changing at an accelerating rate at both local and regional scales. Beta diversity, which quantifes species turnover between these two scales, is emerging as a key driver of ecosystem function that can inform spatial conservation. Yet measuring biodiversity remains a major challenge, especially in aquatic ecosystems. Decoding environmental DNA (eDNA) left behind by organisms ofers the possibility of detecting species sans direct observation, a Rosetta Stone for biodiversity. While eDNA has proven useful to illuminate diversity in aquatic ecosystems, its utility for measuring beta diversity over spatial scales small enough to be relevant to conservation purposes is poorly known. Here we tested how eDNA performs relative to underwater visual census (UVC) to evaluate beta diversity of marine communities. We paired UVC with 12S eDNA metabarcoding and used a spatially structured hierarchical sampling design to assess key spatial metrics of fsh communities on temperate rocky reefs in southern California. eDNA provided a more‑detailed picture of the main sources of spatial variation in both taxonomic richness and community turnover, which primarily arose due to strong species fltering within and among rocky reefs. As expected, eDNA detected more taxa at the regional scale (69 vs. 38) which accumulated quickly with space and plateaued at only ~ 11 samples. Conversely, the discovery rate of new taxa was slower with no sign of saturation for UVC. -
126-1^2 on SOME INTERESTING and NEW RECORDS of MARINE FISHES from INDIA* Central Marine F
i. Mar. biol Ass. tndia, 1968, 10 (1): 126-1^2 ON SOME INTERESTING AND NEW RECORDS OF MARINE FISHES FROM INDIA* By V. SRIRAMACHANDRA MURTY Central Marine Fisheries Research Institute, Mandapam Camp WHILE examining the fish landings by shore seines and trawl nets at various fishing centres along the Palk Bay and Gulf of Mannar in the vicinity of Mandapam the author came across several specimens of Drepane longimana (Bloch and Schneider) which is little known and Drepane punctata (Linnaeus) which was recognised as the only valid species of the genus Drepane, A study of these specimens has shown that these two species are distinct as shown by some authors (vide Text). A brief com parative account of these two species is given in this paper, along with a few remarks and key to distinguish the two species. The author has also been able to collect specimens of Platycephalus isacanthus Cuvier from the above catches, and a single specimen of Stethojulis interrupta (Bleeker) from the inshore waters of Gulf of Mannar caught in dragnet, whose occurrence, in Indian seas, is so far not known. Brief descriptions of these two species are also given in this paper. Family; DREPANIDAE Drepane longimana (Bloch and Schneider) This species was first described by its authors from Tranquebar. Cuvier and Valenciennes (1831) studied the specimens of the genus Drepane, both morphologi cally and anatomically and distinguished the two species D. longimana (Bloch and Schneider) and D. punctata (Linnaeus). Cantor (1850) also recognised the two species as valid. But subsequently Gunther (1860), Bleeker (1877) and Day (1878) recognised D. -
Cleaning Symbiosis Among California Inshore Fishes
CLEANING SYMBIOSIS AMONG CALIFORNIA INSHORE FISHES EDMUNDS. HOBSON' ABSTRACT Cleaning symbiosis among shore fishes was studied during 1968 and 1969 in southern California, with work centered at La Jolla. Three species are habitual cleaners: the seAoriF, Ozyjulis californica; the sharpnose seaperch, Phanerodon atripes; and the kelp perch, Brachyistius frenatus. Because of specific differences in habitat, there is little overlap in the cleaning areas of these three spe- cies. Except for juvenile sharpnose seaperch, cleaning is of secondary significance to these species, even though it may be of major significance to certain individuals. The tendency to clean varies between in- dividuals. Principal prey of most members of these species are free-living organisms picked from a substrate and from midwater-a mode of feeding that favors adaptations suited to cleaning. Because it is exceedingly abundant in a variety of habitats, the seiiorita is the predominant inshore cleaning fish in California. Certain aspects of its cleaning relate to the fact that only a few of the many seiioritas present at a given time will clean, and that this activity is not centered around well-defined cleaning stations, as has been reported for certain cleaning fishes elsewhere. Probably because cleaners are difficult to recognize among the many seiioritas that do not clean, other fishes.generally do not at- tempt to initiate-cleaning; rather, the activity is consistently initiated by the cleaner itself. An infest- ed fish approached by a cleaner generally drifts into an unusual attitude that advertises the temporary existence of the transient cleaning station to other fish in need of service, and these converge on the cleaner. -
Hemichromis Bimaculatus (African Jewelfish)
African Jewelfish (Hemichromis bimaculatus) Ecological Risk Screening Summary U.S. Fish and Wildlife Service, April 2011 Revised, September 2018 Web Version, 2/14/2019 Photo: Zhyla. Licensed under CC BY-SA 3.0. Available: https://commons.wikimedia.org/wiki/File:Hemichromis_bimaculatus1.jpg. (September 2018). 1 Native Range and Status in the United States Native Range From Froese and Pauly (2018): “Africa: widely distributed in West Africa, where it is known from most hydrographic basins [Teugels and Thys van den Audenaerde 2003], associated with forested biotopes [Daget and Teugels 1991, Lamboj 2004]. Also reported from coastal basins of Cameroon, Democratic Republic of the Congo and Nile basin [Teugels and Thys van den Audenaerde 1992], but at least its presence in Cameroon is unconfirmed in [Stiassny et al. 2008]. [Lamboj 2004] limits this species to Guinea, Sierra Leone and Liberia.” 1 From Azeroual and Lalèyè (2010): “This species is widely distributed throughout western Africa, but has also been recorded from Algeria to Egypt.” “Northern Africa: Within this region this species is very rare. It used to be caught from the coastal lagoons, especially Lake Mariut (Egypt) and Algeria. Its [sic] found in Tunisia in the wadis of Kebili in the south of Tunisia and in wadis near Chott Melrhir in eastern Algeria (Kraiem, pers. comm.), and Egypt (Wadi El Rayan Lakes).” “Western Africa: It is known from most hydrographic basins in western Africa.” Status in the United States It is not certain if this species is present in the United States, or if records pertain to H. letourneuxi. From NatureServe (2018): “Introduced and established in Dade County, Florida, […] (Nelson 1983).” From Nico et al. -
UNIVERSITY of CALIFORNIA Los Angeles Design and Implementation of Environmental DNA Metabarcoding Methods for Monitoring the So
UNIVERSITY OF CALIFORNIA Los Angeles Design and Implementation of Environmental DNA Metabarcoding Methods for Monitoring the Southern California Marine Protected Area Network A dissertation submitted in partial satisfaction of the requirements for the degree Doctor of Philosophy in Biology by Zachary Jacob Gold 2020 © Copyright by Zachary Jacob Gold 2020 ABSTRACT OF THE DISSERTATION Design and Implementation of Environmental DNA Metabarcoding Methods for Monitoring the Southern California Marine Protected Area Network by Zachary Jacob Gold Doctor of Philosophy in Biology University of California, Los Angeles, 2020 Professor Paul Barber, Chair Marine protected areas (MPAs) are important tools for maintaining biodiversity and abundance of marine species. However, key to the effectiveness of MPAs is monitoring of marine communities. Current monitoring methods rely heavily on SCUBA-based visual observations that are costly and time consuming, limiting the scope of MPA monitoring. Environmental DNA (eDNA) metabarcoding is a promising cost effective, rapid, and automatable alternative for marine ecosystem monitoring. However, as a developing tool, the utility of eDNA metabarcoding requires improved bioinformatic techniques and reference barcode databases. Furthermore, it is important to understand how eDNA metabarcoding performs relative to visual surveys to better understand the strengths and limitations of each approach. This thesis improves eDNA metabarcoding approaches to survey the nearshore rocky reef and kelp forest ecosystems within the Southern California MPA network. It then tests the effectiveness of eDNA metabarcoding against visual surveys conducted by the Channel Islands National Park Service ii Kelp Forest Monitoring Program and Reef Check California. In Chapter 1, I develop FishCARD, a 12S reference barcode database specific to fishes of the California Current ecosystem. -
Terrestrial and Marine Biological Resource Information
APPENDIX C Terrestrial and Marine Biological Resource Information Appendix C1 Resource Agency Coordination Appendix C2 Marine Biological Resources Report APPENDIX C1 RESOURCE AGENCY COORDINATION 1 The ICF terrestrial biological team coordinated with relevant resource agencies to discuss 2 sensitive biological resources expected within the terrestrial biological study area (BSA). 3 A summary of agency communications and site visits is provided below. 4 California Department of Fish and Wildlife: On July 30, 2020, ICF held a conference 5 call with Greg O’Connell (Environmental Scientist) and Corianna Flannery (Environmental 6 Scientist) to discuss Project design and potential biological concerns regarding the 7 Eureka Subsea Fiber Optic Cables Project (Project). Mr. O’Connell discussed the 8 importance of considering the western bumble bee. Ms. Flannery discussed the 9 importance of the hard ocean floor substrate and asked how the cable would be secured 10 to the ocean floor to reduce or eliminate scour. The western bumble bee has been 11 evaluated in the Biological Resources section of the main document, and direct and 12 indirect impacts are avoided. The Project Description describes in detail how the cable 13 would be installed on the ocean floor, the importance of the hard bottom substrate, and 14 the need for avoidance. 15 Consultation Outcomes: 16 • The Project was designed to avoid hard bottom substrate, and RTI Infrastructure 17 (RTI) conducted surveys of the ocean floor to ensure that proper routing of the 18 cable would occur. 19 • Ms. Flannery will be copied on all communications with the National Marine 20 Fisheries Service 21 California Department of Fish and Wildlife: On August 7, 2020, ICF held a conference 22 call with Greg O’Connell to discuss a site assessment and survey approach for the 23 western bumble bee. -
Humboldt Bay Fishes
Humboldt Bay Fishes ><((((º>`·._ .·´¯`·. _ .·´¯`·. ><((((º> ·´¯`·._.·´¯`·.. ><((((º>`·._ .·´¯`·. _ .·´¯`·. ><((((º> Acknowledgements The Humboldt Bay Harbor District would like to offer our sincere thanks and appreciation to the authors and photographers who have allowed us to use their work in this report. Photography and Illustrations We would like to thank the photographers and illustrators who have so graciously donated the use of their images for this publication. Andrey Dolgor Dan Gotshall Polar Research Institute of Marine Sea Challengers, Inc. Fisheries And Oceanography [email protected] [email protected] Michael Lanboeuf Milton Love [email protected] Marine Science Institute [email protected] Stephen Metherell Jacques Moreau [email protected] [email protected] Bernd Ueberschaer Clinton Bauder [email protected] [email protected] Fish descriptions contained in this report are from: Froese, R. and Pauly, D. Editors. 2003 FishBase. Worldwide Web electronic publication. http://www.fishbase.org/ 13 August 2003 Photographer Fish Photographer Bauder, Clinton wolf-eel Gotshall, Daniel W scalyhead sculpin Bauder, Clinton blackeye goby Gotshall, Daniel W speckled sanddab Bauder, Clinton spotted cusk-eel Gotshall, Daniel W. bocaccio Bauder, Clinton tube-snout Gotshall, Daniel W. brown rockfish Gotshall, Daniel W. yellowtail rockfish Flescher, Don american shad Gotshall, Daniel W. dover sole Flescher, Don stripped bass Gotshall, Daniel W. pacific sanddab Gotshall, Daniel W. kelp greenling Garcia-Franco, Mauricio louvar -
Morphological Variations in the Scleral Ossicles of 172 Families Of
Zoological Studies 51(8): 1490-1506 (2012) Morphological Variations in the Scleral Ossicles of 172 Families of Actinopterygian Fishes with Notes on their Phylogenetic Implications Hin-kui Mok1 and Shu-Hui Liu2,* 1Institute of Marine Biology and Asia-Pacific Ocean Research Center, National Sun Yat-sen University, Kaohsiung 804, Taiwan 2Institute of Oceanography, National Taiwan University, 1 Roosevelt Road, Sec. 4, Taipei 106, Taiwan (Accepted August 15, 2012) Hin-kui Mok and Shu-Hui Liu (2012) Morphological variations in the scleral ossicles of 172 families of actinopterygian fishes with notes on their phylogenetic implications. Zoological Studies 51(8): 1490-1506. This study reports on (1) variations in the number and position of scleral ossicles in 283 actinopterygian species representing 172 families, (2) the distribution of the morphological variants of these bony elements, (3) the phylogenetic significance of these variations, and (4) a phylogenetic hypothesis relevant to the position of the Callionymoidei, Dactylopteridae, and Syngnathoidei based on these osteological variations. The results suggest that the Callionymoidei (not including the Gobiesocidae), Dactylopteridae, and Syngnathoidei are closely related. This conclusion was based on the apomorphic character state of having only the anterior scleral ossicle. Having only the anterior scleral ossicle should have evolved independently in the Syngnathioidei + Dactylopteridae + Callionymoidei, Gobioidei + Apogonidae, and Pleuronectiformes among the actinopterygians studied in this paper. http://zoolstud.sinica.edu.tw/Journals/51.8/1490.pdf Key words: Scleral ossicle, Actinopterygii, Phylogeny. Scleral ossicles of the teleostome fish eye scleral ossicles and scleral cartilage have received comprise a ring of cartilage supporting the eye little attention. It was not until a recent paper by internally (i.e., the sclerotic ring; Moy-Thomas Franz-Odendaal and Hall (2006) that the homology and Miles 1971). -
Proceedings of the Indiana Academy of Science 1 1 8(2): 143—1 86
2009. Proceedings of the Indiana Academy of Science 1 1 8(2): 143—1 86 THE "LOST" JORDAN AND HAY FISH COLLECTION AT BUTLER UNIVERSITY Carter R. Gilbert: Florida Museum of Natural History, University of Florida, Gainesville, Florida 32611 USA ABSTRACT. A large fish collection, preserved in ethanol and assembled by Drs. David S. Jordan and Oliver P. Hay between 1875 and 1892, had been stored for over a century in the biology building at Butler University. The collection was of historical importance since it contained some of the earliest fish material ever recorded from the states of South Carolina, Georgia, Mississippi and Kansas, and also included types of many new species collected during the course of this work. In addition to material collected by Jordan and Hay, the collection also included specimens received by Butler University during the early 1880s from the Smithsonian Institution, in exchange for material (including many types) sent to that institution. Many ichthyologists had assumed that Jordan, upon his departure from Butler in 1879. had taken the collection. essentially intact, to Indiana University, where soon thereafter (in July 1883) it was destroyed by fire. The present study confirms that most of the collection was probably transferred to Indiana, but that significant parts of it remained at Butler. The most important results of this study are: a) analysis of the size and content of the existing Butler fish collection; b) discovery of four specimens of Micropterus coosae in the Saluda River collection, since the species had long been thought to have been introduced into that river; and c) the conclusion that none of Jordan's 1878 southeastern collections apparently remain and were probably taken intact to Indiana University, where they were lost in the 1883 fire.