Foundations of Object-Oriented Languages∗ Workshop Report
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The Effect of Compression and Expansion on Stochastic Reaction Networks
IMT School for Advanced Studies, Lucca Lucca, Italy The Effect of Compression and Expansion on Stochastic Reaction Networks PhD Program in Institutions, Markets and Technologies Curriculum in Computer Science and Systems Engineering (CSSE) XXXI Cycle By Tabea Waizmann 2021 The dissertation of Tabea Waizmann is approved. Program Coordinator: Prof. Rocco De Nicola, IMT Lucca Supervisor: Prof. Mirco Tribastone, IMT Lucca The dissertation of Tabea Waizmann has been reviewed by: Dr. Catia Trubiani, Gran Sasso Science Institute Prof. Michele Loreti, University of Camerino IMT School for Advanced Studies, Lucca 2021 To everyone who believed in me. Contents List of Figures ix List of Tables xi Acknowledgements xiii Vita and Publications xv Abstract xviii 1 Introduction 1 2 Background 6 2.1 Multisets . .6 2.2 Reaction Networks . .7 2.3 Ordinary Lumpability . 11 2.4 Layered Queuing Networks . 12 2.5 PEPA . 16 3 Coarse graining mass-action stochastic reaction networks by species equivalence 19 3.1 Species Equivalence . 20 3.1.1 Species equivalence as a generalization of Markov chain ordinary lumpability . 27 3.1.2 Characterization of SE for mass-action networks . 27 3.1.3 Computation of the maximal SE and reduced net- work . 28 vii 3.2 Applications . 31 3.2.1 Computational systems biology . 31 3.2.2 Epidemic processes in networks . 33 3.3 Discussion . 36 4 DiffLQN: Differential Equation Analysis of Layered Queuing Networks 37 4.1 DiffLQN .............................. 38 4.1.1 Architecture . 38 4.1.2 Capabilities . 38 4.1.3 Syntax . 39 4.2 Case Study: Client-Server dynamics . 41 4.3 Discussion . -
Design and Implementation of Generics for the .NET Common Language Runtime
Design and Implementation of Generics for the .NET Common Language Runtime Andrew Kennedy Don Syme Microsoft Research, Cambridge, U.K. fakeÒÒ¸d×ÝÑeg@ÑicÖÓ×ÓfغcÓÑ Abstract cally through an interface definition language, or IDL) that is nec- essary for language interoperation. The Microsoft .NET Common Language Runtime provides a This paper describes the design and implementation of support shared type system, intermediate language and dynamic execution for parametric polymorphism in the CLR. In its initial release, the environment for the implementation and inter-operation of multiple CLR has no support for polymorphism, an omission shared by the source languages. In this paper we extend it with direct support for JVM. Of course, it is always possible to “compile away” polymor- parametric polymorphism (also known as generics), describing the phism by translation, as has been demonstrated in a number of ex- design through examples written in an extended version of the C# tensions to Java [14, 4, 6, 13, 2, 16] that require no change to the programming language, and explaining aspects of implementation JVM, and in compilers for polymorphic languages that target the by reference to a prototype extension to the runtime. JVM or CLR (MLj [3], Haskell, Eiffel, Mercury). However, such Our design is very expressive, supporting parameterized types, systems inevitably suffer drawbacks of some kind, whether through polymorphic static, instance and virtual methods, “F-bounded” source language restrictions (disallowing primitive type instanti- type parameters, instantiation at pointer and value types, polymor- ations to enable a simple erasure-based translation, as in GJ and phic recursion, and exact run-time types. -
Type Checking Physical Frames of Reference for Robotic Systems
PhysFrame: Type Checking Physical Frames of Reference for Robotic Systems Sayali Kate Michael Chinn Hongjun Choi Purdue University University of Virginia Purdue University USA USA USA [email protected] [email protected] [email protected] Xiangyu Zhang Sebastian Elbaum Purdue University University of Virginia USA USA [email protected] [email protected] ABSTRACT Engineering (ESEC/FSE ’21), August 23–27, 2021, Athens, Greece. ACM, New A robotic system continuously measures its own motions and the ex- York, NY, USA, 16 pages. https://doi.org/10.1145/3468264.3468608 ternal world during operation. Such measurements are with respect to some frame of reference, i.e., a coordinate system. A nontrivial 1 INTRODUCTION robotic system has a large number of different frames and data Robotic systems have rapidly growing applications in our daily life, have to be translated back-and-forth from a frame to another. The enabled by the advances in many areas such as AI. Engineering onus is on the developers to get such translation right. However, such systems becomes increasingly important. Due to the unique this is very challenging and error-prone, evidenced by the large characteristics of such systems, e.g., the need of modeling the phys- number of questions and issues related to frame uses on developers’ ical world and satisfying the real time and resource constraints, forum. Since any state variable can be associated with some frame, robotic system engineering poses new challenges to developers. reference frames can be naturally modeled as variable types. We One of the prominent challenges is to properly use physical frames hence develop a novel type system that can automatically infer of reference. -
Dynamic Extension of Typed Functional Languages
Dynamic Extension of Typed Functional Languages Don Stewart PhD Dissertation School of Computer Science and Engineering University of New South Wales 2010 Supervisor: Assoc. Prof. Manuel M. T. Chakravarty Co-supervisor: Dr. Gabriele Keller Abstract We present a solution to the problem of dynamic extension in statically typed functional languages with type erasure. The presented solution re- tains the benefits of static checking, including type safety, aggressive op- timizations, and native code compilation of components, while allowing extensibility of programs at runtime. Our approach is based on a framework for dynamic extension in a stat- ically typed setting, combining dynamic linking, runtime type checking, first class modules and code hot swapping. We show that this framework is sufficient to allow a broad class of dynamic extension capabilities in any statically typed functional language with type erasure semantics. Uniquely, we employ the full compile-time type system to perform run- time type checking of dynamic components, and emphasize the use of na- tive code extension to ensure that the performance benefits of static typing are retained in a dynamic environment. We also develop the concept of fully dynamic software architectures, where the static core is minimal and all code is hot swappable. Benefits of the approach include hot swappable code and sophisticated application extension via embedded domain specific languages. We instantiate the concepts of the framework via a full implementation in the Haskell programming language: providing rich mechanisms for dy- namic linking, loading, hot swapping, and runtime type checking in Haskell for the first time. We demonstrate the feasibility of this architecture through a number of novel applications: an extensible text editor; a plugin-based network chat bot; a simulator for polymer chemistry; and xmonad, an ex- tensible window manager. -
Orthogonal to the Java Imperative?
Orthogonal to the Java Imperative? Suad Alagi´c, Jose Solorzano, and David Gitchell Department of Computer Science, Wichita State University Wichita, KS 67260-0083, USA [email protected] Abstract. Three nontrivial limitations of the existing JavaTM technol- ogy are considered from the viewpoint of object-oriented database tech- nology. The limitations are: lack of support for orthogonal persistence, lack of parametric (and in fact bounded and F-bounded) polymorphism and lack of an assertion (constraint) language. These limitations are over- come by leaving Java as it is, and developing a declarative (query in par- ticular) component of the Java technology. This declarative language is implemented on top of the Java Virtual Machine, extended with orthog- onal and transitive persistence. The model of persistence also features complex name space management. Keywords: Declarative languages, orthogonal persistence, F-bounded polymorphism, Java Virtual Machine. 1 Introduction In spite of the fact that JavaTM [17] is a product of good language design, it exhibits several serious limitations with respect to object-oriented database management. A perfectly valid justification is that it was probably never con- ceived as a database programming language. Yet, some of these database-critical features are important for object-oriented programming in general. The first such limitation is, of course, the lack of support for persistence. Persistence is a key feature of object-oriented database technology [10]. The second limitation is the absence of parametric polymorphism. This lim- itation is particularly critical in database management because most database technologies rely heavily on collections. Static typing of collections in Java is impossible, and so is static typing of queries. -
Introduction to the Literature on Programming Language Design Gary T
Computer Science Technical Reports Computer Science 7-1999 Introduction to the Literature On Programming Language Design Gary T. Leavens Iowa State University Follow this and additional works at: http://lib.dr.iastate.edu/cs_techreports Part of the Programming Languages and Compilers Commons Recommended Citation Leavens, Gary T., "Introduction to the Literature On Programming Language Design" (1999). Computer Science Technical Reports. 59. http://lib.dr.iastate.edu/cs_techreports/59 This Article is brought to you for free and open access by the Computer Science at Iowa State University Digital Repository. It has been accepted for inclusion in Computer Science Technical Reports by an authorized administrator of Iowa State University Digital Repository. For more information, please contact [email protected]. Introduction to the Literature On Programming Language Design Abstract This is an introduction to the literature on programming language design and related topics. It is intended to cite the most important work, and to provide a place for students to start a literature search. Keywords programming languages, semantics, type systems, polymorphism, type theory, data abstraction, functional programming, object-oriented programming, logic programming, declarative programming, parallel and distributed programming languages Disciplines Programming Languages and Compilers This article is available at Iowa State University Digital Repository: http://lib.dr.iastate.edu/cs_techreports/59 Intro duction to the Literature On Programming Language Design Gary T. Leavens TR 93-01c Jan. 1993, revised Jan. 1994, Feb. 1996, and July 1999 Keywords: programming languages, semantics, typ e systems, p olymorphism, typ e theory, data abstrac- tion, functional programming, ob ject-oriented programming, logic programming, declarative programming, parallel and distributed programming languages. -
Incremental Type Inference for Software Engineering
Incremental Type Inference for Software Engineering Jonathan Aldrich University of Washington [email protected] Abstract The desire to use high-level language constructs while Software engineering focused type inference can enhance preserving a static type-safe guarantee drives programmer productivity in statically typed object- programmers to ask for ever-more powerful type systems. oriented languages. Type inference is a system of However, specifying a type that may be almost as long automatically inferring the argument and return types of and complicated as the function it describes can be a function. It provides considerable programming impractical. convenience, because the programmer can realize the benefits of a statically typed language without manually 1.2. Type Inference in ML entering the type annotations. We study the problem of type inference in object-oriented languages and propose In ML, it is possible for the compiler to analyze the an incremental, programmer-aided approach. Code is body of a function and infer the type of that function. For added one method at a time and missing types are example, a function that squares each of its arguments and inferred if possible. We present a specification and returns the sum of the squares clearly takes several algorithm for inferring simple object-oriented types in arguments of type int and yields an int in return (see this kind of incremental development environment. figure 1). - fun sumsqrs (x, y) = x*x + y*y; 1. Introduction val sumsqrs = fn : int * int -> int Type inference was popularized by the ML language [Milner et al., 1990]. ML is made up of functions and Figure 1. -
Luca Cardelli • Curriculum Vitae • 2014
Luca Cardelli • Curriculum Vitae • 2014 Short Bio Luca Cardelli was born near Montecatini Terme, Italy, studied at the University of Pisa (until 1978-07- 12), and has a Ph.D. in computer science from the University of Edinburgh(1982-04-01). He worked at Bell Labs, Murray Hill, from 1982-04-05 to 1985-09-20, and at Digital Equipment Corporation, Systems Research Center in Palo Alto, from 1985-09-30 to 1997-10-31, before assuming a position on 1997-11-03 at Microsoft Research, in Cambridge UK, where he was head of the Programming Principles and Tools andSecurity groups until 2012, and is currently a Principal Researcher. His main interests are in type theory and operational semantics (for applications to language design, semantics, and implementation), and in concurrency theory (for applications to computer networks and to modeling biological systems). He implemented the first compiler for ML (one of the most popular typed functional language, whose recent incarnations are Caml and F#) and one of the earliest direct-manipulation user-interface editors. He was a member of the Modula-3 design committee, and has designed a few experimental languages, including Obliq: a distributed higher- order scripting language (voted most influential POPL'95 paper 10 years later), and Polyphonic C#, a distributed extension of C#. His more protracted research activity has been in establishing the semantic and type-theoretic foundations of object-oriented languages, resulting in the 1996 book "A Theory of Objects" with Martin Abadi. More recently he has focused on modeling global and mobile computation, via the Ambient Calculus andSpatial Logics, which indirectly led to a current interest in Systems Biology , Molecular Programming, and Stochastic Systems. -
Bounded Quantification for Gradual Typing
Bounded Quantification for Gradual Typing Harley Eades III and Michael Townsend Computer and Information Sciences Augusta University Augusta, USA [email protected] Abstract. In an earlier paper we introduce a new categorical model based on retracts that combines static and dynamic typing. We then showed that our model gave rise to a new and simple type system which combines static and dynamic typing. In this paper, we extend this type system with bounded quantification and lists, and then develop a grad- ually typed surface language that uses our new type system as a core casting calculus. Finally, we prove the gradual guarantee as put forth by Siek et al. 1 Introduction In a previous paper the authors [?] show that static and dynamic typing can be combined in a very simple and intuitive way by combining the work of Scott [13] and Lambek [9] on categorical models of the untyped and typed λ-calculus, respectively. First, add a new type ? read \the type of untyped programs" { also sometimes called the unknown type { and then add four new programs split :? ! (? ! ?), squash : (? ! ?) ! ?, boxC : C ! ?, and unboxC :? ! C , such that, squash; split = id?!? and boxC ; unboxC = idC . Categorically, split and squash, and box and unbox form two retracts. Then extending the simply typed λ-calculus with these two retracts results in a new core casting calculus, called Simply Typed Grady, for Siek and Taha's gradual functional type system [16]. Furthermore, the authors show that Siek and Taha's system can be given a categorical model in cartesian closed categories with the two retracts. -
An Imperative Object Calculus
An Imperative Object Calculus Mart’n Abadi and Luca Cardelli Digital Equipment Corporation, Systems Research Center Abstract. We develop an imperative calculus of objects. Its main type con- structor is the one for object types, which incorporate variance annotations and Self types. A subtyping relation between object types supports object subsumption. The type system for objects relies on unusual but beneficial as- sumptions about the possible subtypes of an object type. With the addition of polymorphism, the calculus can express classes and inheritance. 1 Introduction Object calculi are formalisms at the same level of abstraction as λ-calculi, but based exclusively on objects rather than functions. Unlike λ-calculi, object calculi are de- signed specifically for clarifying features of object-oriented languages. There is a wide spectrum of relevant object calculi, just as there is a wide spectrum of λ-calculi. One can investigate untyped, simply-typed, and polymorphic calculi, as well as functional and imperative calculi. In object calculi, as in λ-calculi, a small untyped kernel is enriched with derived constructions and with increasingly sophisticated type systems, until language fea- tures can be realistically modeled. The compactness of the initial kernel gives concep- tual unity to the calculi, and enables formal analysis. In this paper we introduce a tiny but expressive imperative calculus. It provides a minimal setting in which to study the imperative operational semantics and the deli- cate typing rules of practical object-oriented languages. The calculus comprises objects, method invocation, method update, object cloning, and local definitions. In a quest for minimality, we take objects to be just collections of methods. -
Aggregate Programming in Scala: a Core Library and Actor-Based Platform for Distributed Computational Fields
Alma Mater Studiorum Universita` di Bologna Campus di· Cesena Scuola di Ingegneria e Architettura Corso di Laurea Magistrale in Ingegneria e Scienze Informatiche Aggregate Programming in Scala: a Core Library and Actor-Based Platform for Distributed Computational Fields Tesi in Ingegneria dei Sistemi Software Adattativi Complessi Relatore: Presentata da: Prof. MIRKO VIROLI ROBERTO CASADEI Anno Accademico 2014-2015 Sessione III Contents Abstract (italiano) i Abstract iii Introduction v I Background: Scala for Library Development 1 1 Advanced Scala Features 3 1.1 The Scala programming language...................3 1.2 On object-oriented programming and traits..............4 1.2.1 OOP in Scala: a quick tour of the basics...........4 1.2.2 Traits..............................7 1.2.3 Class construction and linearisation..............9 1.2.4 Traits: member overriding and super resolution....... 10 1.2.5 Trait instantiation, refinement, early definitions....... 11 1.3 The Scala type system......................... 12 1.3.1 Some preparatory definitions.................. 12 1.3.2 Advanced types......................... 13 1.4 Generic programming in Scala..................... 16 1.4.1 Type parameters........................ 17 1.4.2 Type bounds (bounded quantification)............ 17 1.4.3 Type variance.......................... 18 1.4.4 Abstract types vs. type parameters.............. 20 1.5 Implicits................................. 21 1.5.1 Implicit scope.......................... 22 CONTENTS 1.5.2 Implicit classes......................... 24 1.5.3 More on implicits........................ 25 2 Advanced Scala Techniques 29 2.1 \Pimp my library" pattern....................... 29 2.2 Type classes............................... 31 2.3 Component modelling and implementation.............. 32 2.4 Cake Pattern.............................. 35 2.5 Family polymorphism.......................... 38 2.6 Internal DSL development...................... -
Using Kinds to Type Partially-Polymorphic Methods
Electronic Notes in Theoretical Computer Science 75 (2003) URL: http://www.elsevier.nl/locate/entcs/volume75.html 20 pages Using kinds to type partially-polymorphic methods Daniel Bonniot 1 INRIA Rocquencourt France Abstract We extends type constraints with kind constraints to increase the expressiveness of constraint-based nominal type systems. In the context of object-oriented program- ming languages, they offer an alternative to the use of F-bounded polymorphism to type homogeneous binary methods. We also introduce the notion of partially poly- morphic methods to describe a common situation in object oriented hierarchies, and show how these can be typed in a modular fashion with kind constraints. 1 Introduction Static typing provides early detection and prevention of errors, resulting in increased software quality and lower production costs. Since the set of error- free programs is undecidable for Turing complete programming languages, type systems can only define an approximation of error-free programs —that is, a subset of them, to remain safe. However, one may also be less ambitious, and let some kind of anomalies, such as downward casts, exhaustiveness of pattern matching or exceptions handlers, be only detected dynamically. Each of these anomalies can then be tackled separately, either by some other form of static analysis or by a specific extension to the type system. Functional style and object-oriented style are two of the most popular programming paradigms at the moment. However, their type systems have been developed in rather different directions. While functional languages, as incarnated by ML, are based on the polymorphic, unconstrained Hindley- Milner type system, type systems for object-oriented languages such as Java or C# often lack polymorphism and higher-order functions but include sub- typing.