{Download PDF} Understanding NMR Spectroscopy

Total Page:16

File Type:pdf, Size:1020Kb

{Download PDF} Understanding NMR Spectroscopy UNDERSTANDING NMR SPECTROSCOPY PDF, EPUB, EBOOK James Keeler | 526 pages | 24 Sep 2010 | John Wiley and Sons Ltd | 9780470746080 | English | Hoboken, United States Understanding NMR Spectroscopy PDF Book Fourier transformation of h gives the spectrum i ; the resolution has clearly Fig. The basic idea is simple. For example, if the output power is half the input power, i. For example, the term 2I1 x I2 z evolves under Representations of different the offset in the following way: types of operators. In most high-field NMR, however, the distortions are usually modest and the characteristic distortions roofing can in fact help to identify related peaks. Also, the extra line broadening caused by the matched filter may not be acceptable on the grounds of the decrease in reso- lution it causes. The axis butions are all added up there is a net magnetic field along the direction of the set in this diagram is a right-handed one, which is what applied field B0. In what way is the outcome different from the case where the refocusing pulse is applied about the x axis? This comes about because the Hamiltonian also affects how the spin system evolves in time. Some of the noise is contributed by the amplifiers and other electronics in the spec- trometer, but the major contributor is the thermal noise from the coil used to detect the signal. In the rotating frame this field along the z axis appears to shrink, and under the right conditions can become small enough that the RF field is dominant. How would you describe the spectrum? Chapter 3 introduces the vector model of NMR. The precise mathematical form of the Hamiltonian is found by first writing down an expression for the energy of the system using classical mechanics and then "translating" this into quantum mechanical form according to a set of rules. However, we do not want to get involved in a great deal of complex quantum mechanics! Show that the values you find are consistent with the observed intensities. There are various ways of representing such a spectrum on paper, but the one most usually used is to make a contour plot in which the intensity of the peaks is represented by contour lines drawn at suitable intervals, in the same way as a topographical map. This revised and updated edition takes the same approach as the highly-acclaimed first edition. So, for example, if the linewidth is 2 Hz in the original spectrum, applying an additional line broadening of 2 Hz will give the optimum SNR. In fact, quantum mechanics says no such thing see Levitt Chapter 9 for a very lucid discussion of this point. If the Larmor frequencies of two spins are widely separated they are given letters which are widely separated in the alphabet. The amplitude of the signal in each interferogram is different, but in this case the modulation frequency is the same. The complete arrangement for quadrature detection is outlined in Fig. We will see in a later section that the presence of a mixture of x- and y- magnetization leads to phase errors in the spectrum which can be difficult to correct. This conclusion is independent of the value of the offset ; the diagram illustrates this by the dashed line which represents the evolution of vector with a smaller offset. Such a device has all the desirable properties outlined above and is also readily controlled by a computer interface. The text concentrates on the description of commonly-used experiments and explains in detail the theory behind how such experiments work. For example, Rahmani et al. In summary, the output of the mixer is at the offset frequency in the rotat- ing frame and takes the form of a cosine modulation; it is thus equivalent to detecting the x component of the magnetization in the rotating frame. So, for example, for three spins there are 8 combinations leading to 8 energy levels. Such a correction is called a frequency independent or zero order phase cor- Attempts have been made over rection as it is the same for all peaks in the spectrum, regardless of their offset. Some further useful relationships are given in section 6. Pulse calibration is therefore an important preliminary to any experiment. The operator 2I1 x I2 z is described as magnetization on spin 1 which is The absorption and dispersion anti-phase with respect to the coupling to spin 2. These four transitions form the four lines of the multiplet a doublet of doublets at the shift of spin 1. Sampling rates Given that the ADC is only going to sample the signal at regular intervals a the question arises as to how frequently it is necessary to sample the FID i. There are also a number of texts which take a more theory-based approach, at a number of different levels. The chemical shift provides information about the structure of the molecule. However, there is a limit to the amount of power which can be applied because of the attenuator high voltages which are generated in the probe. S y now starts out at a finite value, rather than at zero. First, t1 is set to zero, the pulse sequence is executed and the resulting free induction decay recorded. The splitting of the doublets is the scalar coupling, J12, quoted in Hz; the subscripts indicate which spins are involved. It should not be forgotten that the weighting function also acts on the signal, causing it to decay more quickly. These points are illustrated in Fig. Understanding NMR Spectroscopy Writer However, there is a limit to the amount of power which can be applied because of the attenuator high voltages which are generated in the probe. These splitting patterns can be complex or simple and, likewise, can be straightforwardly interpretable or deceptive. Nucleic acid and protein NMR spectroscopy are similar but differences exist. In c we see that taking the first quarter of the data gives a further improvement in the SNR. Diamagnetic anisotropy Opens a modal. Of course, to obtain a correctly phased spectrum we have to choose the correct slope of the graph of phase against offset. University of California, Irvine. The results are shown in the table, along with the spin states of the passive spins 2 and 3 in this case. Wikimedia Commons. The vector is said to precesses about the field and this x particular motion is called Larmor precession. This operator is exceptionally important as its eigenvalues and eigenfunctions are the "energy levels" of the system, and it is transitions between these energy levels which are detected in spectroscopy. We can measure the rate of this process using the inversion recovery experiment whose pulse sequence is shown in Fig. The solution to this problem is to mix down the signal to a lower frequency, as is described in the next section. This is a very nice result as the time dependence has been removed from the problem. The quantum mechanical tools needed to analyse pulse sequences are introduced set by step, but the approach is relatively informal with the emphasis on obtaining a good understanding of how the experiments actually work. When the FID is Fourier transformed the spectrum is also represented by a series of data points. For example, consider a proton spectrum covering about 10 ppm; if we put the transmitter frequency at about 5 ppm, the maximum offset is 5 ppm, either positive or negative; this is illustrated in Fig. At equilibrium the density operator is proportional to Iz there is only z- magnetization present. Thus, acquisition of quantitative heavy-element spectra can be time-consuming, taking tens of minutes to hours. Shown in b is the effect of halving the time spent acquiring the data; the SNR improves significantly. The bad consequence is that when it comes to hard pulses the range of offsets over which there is anything like complete inversion is much more limited than the range of offsets over which there is significant excitation. At first sight you might think that to achieve this we would need a coil oriented along the y axis to apply a pulse along y. Coupling constant Opens a modal. This kind of interpretation is a very useful way of thinking about the origin of peaks in a two-dimensional spectrum. It should not be forgotten that the weighting function also acts on the signal, causing it to decay more quickly. What we have to do is to surround the sample with a set of shim coils, each of which produces a tiny magnetic field with a particular spatial profile. Sampling rates Given that the ADC is only going to sample the signal at regular intervals a the question arises as to how frequently it is necessary to sample the FID i. Levitt Spin Dynamics Wiley. Understanding NMR Spectroscopy Reviews Show that the values you find are consistent with the observed intensities. Further details are to be found in section 2. On an energy level diagram, indicate the four transitions which comprise the spin 2 multiplet, and which four comprise the spin 3 multiplet. Usually the attenuator is under computer control and its value can be set in dB. Some further useful relationships are given in section 6. Estimate the size of the phase correction which will be needed at the edges of the spectrum. We see that the RF field is about eight times the offset, and so the pulse can be regarded as strong over the whole width of the spectrum. We thus see that to distinguish between positive and negative frequencies we need to know both the x and y components of the magnetization.
Recommended publications
  • Neutron Spin Echo Spectroscopy
    Neutron Spin Echo Spectroscopy Peter Fouquet [email protected] Institut Laue-Langevin Grenoble, France Oxford Neutron School 2017 What you are supposed to learn in this tutorial 1. The length and time scales that can be studied using NSE spectroscopy 2. The measurement principle of NSE spectroscopy 3. Discrimination techniques for coherent, incoherent and magnetic dynamics 4. To which scientific problems can I apply NSE spectroscopy? NSE-Tutorial Mind Map Quantum Mechanical Model Resonance Spin-Echo Classical Model Measurement principle “4-point Echo” NSE spectroscopy Instrument Frustrated Components Magnets Bio- molecules Time/Space Map NSE around Surface the globe Diffusion Science Cases Paramagnetic Spin Echo Experiment planning and Interpretation Diffusion Glasses Polymers Models Coherent and Incoherent Scattering Data Treatment The measurement principle of neutron spin echo spectroscopy (quantum mechanical model) • The neutron wave function is split by magnetic fields • The 2 wave packets arrive at magnetic coil 1 magnetic coil 2 polarised sample the sample with a time neutron difference t • If the molecules move between the arrival of the first and second wave packet then coherence is lost • The intermediate scattering t λ3 Bdl function I(Q,t) reflects this ∝ loss in coherence strong wavelength field integral dependence Return The measurement principle of neutron spin echo spectroscopy Dynamic Scattering NSE spectra for diffusive motion Function S(Q,ω) G(R,ω) I(Q,t) = e-t/τ Fourier Transforms temperature up ⇒ τ down Intermediate VanHove
    [Show full text]
  • Princeton University, Physics 311/312; NMR Andthe Spin Echo 1
    Princeton University, Physics 311/312; NMR andthe Spin Echo 1 NUCLEAR MAGNETIC RESONANCE AND THE SPIN ECHO Introduction In this experiment we investigate the properties of several materials using pulsed nuclear magnetic resonance (NMR). The NMR technique is used extensively for medical imaging and as a tool in condensed matter and materials physics. The physical mechanism behind NMR is a resonant transition between the energy states of a precessing spin 1/2 particle, specifically a proton, in an external magnetic field. By illuminating the atoms in a liquid, gas or solid with pulses of radio frequency (RF) radiation of various lengths, one can examine the interaction of the spins with the external field, with each other, and with the “lattice.” À Consider a particle with classical angular momentum J in a constant external magnetic field ¼ .The = ­ h  particle has a magnetic moment due to its angular momentum. From the classical equation of À motion we know that if ¼ and are not parallel, the magnetic moment will precess about the magnetic ! = ­À À ¼ field. The frequency of this precession, ¼ , is independent of the angle between and and is called the Larmor frequency. À In NMR, a sample is placed in a constant magnetic field ¼ as shown in Figure 1. All the spins of À the protons try to align with ¼ but the thermal motion (phonons) of the lattice, to some extent, prevents Å À ¼ this. There is still though a net magnetization, ¼ , parallel to . To manipulate the magnetization, we À apply an RF field perpendicular to ¼ . This results in an oscillating magnetic field that can be viewed as the superposition of two counter-rotating components; only the component rotating in the same direction as that of the spin’s precession has significant effect.
    [Show full text]
  • Double Spin-Echo Sequence for Rapid Spectroscopic Imaging of Hyperpolarized 13C
    Journal of Magnetic Resonance 187 (2007) 357–362 www.elsevier.com/locate/jmr Communication Double spin-echo sequence for rapid spectroscopic imaging of hyperpolarized 13C Charles H. Cunningham a,*, Albert P. Chen b, Mark J. Albers b, John Kurhanewicz b, Ralph E. Hurd c, Yi-Fen Yen c, John M. Pauly d, Sarah J. Nelson b, Daniel B. Vigneron b a Department of Medical Biophysics, Sunnybrook Health Sciences Centre, 2075 Bayview Ave., Toronto, Ont., Canada M4N 3M5 b Department of Radiology, University of California at San Francisco, San Francisco, CA, USA c GE Healthcare Technologies, Menlo Park, CA, USA d Department of Electrical Engineering, Stanford University, Stanford, CA, USA Received 2 February 2007; revised 17 April 2007 Available online 2 June 2007 Abstract Dynamic nuclear polarization of metabolically active compounds labeled with 13C has been introduced as a means for imaging met- abolic processes in vivo. To differentiate between the injected compound and the various metabolic products, an imaging technique capa- ble of separating the different chemical-shift species must be used. In this paper, the design and testing of a pulse sequence for rapid magnetic resonance spectroscopic imaging (MRSI) of hyperpolarized 13C is presented. The pulse sequence consists of a small-tip exci- tation followed by a double spin echo using adiabatic refocusing pulses and a ‘‘flyback’’ echo-planar readout gradient. Key elements of the sequence are insensitivity to calibration of the transmit gain, the formation of a spin echo giving high-quality spectral information, and a small effective tip angle that preserves the magnetization for a sufficient duration.
    [Show full text]
  • Neutron Spin Echo Spectroscopy
    Neutron Spin Echo Spectroscopy Peter Fouquet [email protected] Institut Laue-Langevin Grenoble, France September 2014 Hercules Specialized Course 17 - Grenoble What you are supposed to learn in this lecture 1. The length and time scales that can be studied using NSE spectroscopy 2. The measurement principle of NSE spectroscopy 3. Discrimination techniques for coherent, incoherent and magnetic dynamics 4. To which scientific problems can I apply NSE spectroscopy? The measurement principle of neutron spin echo spectroscopy (quantum mechanical model) The neutron wave function is split by magnetic fields magnetic coil 1 magnetic coil 2 polarised sample The 2 wave packets arrive at neutron the sample with a time difference t If the molecules move between the arrival of the first and second wave packet then coherence is lost t λ3 Bdl The intermediate ∝ scattering function I(Q,t) reflects this loss in coherence strong wavelength field integral dependence The measurement principle of neutron spin echo spectroscopy Dynamic Scattering NSE spectra for diffusive motion Function S(Q,ω) G(R,ω) I(Q,t) = e-t/τ Fourier Transforms temperature up ⇒ τ down Intermediate VanHove Correlation Scattering Function Function I(Q,t) G(R,t) Measured with Neutron Spin Echo (NSE) Spectroscopy Neutron spin echo spectroscopy in the time/space landscape NSE is the neutron spectroscopy with the highest energy resolution The time range covered is 1 ps < t < 1 µs (equivalent to neV energy resolution) The momentum transfer range is 0.01 < Q < 4 Å-1 Spin Echo The measurement principle
    [Show full text]
  • Echo-Detected Electron Paramagnetic Resonance Spectra of Spin-Labeled Lipids in Membrane Model Systems Denis A
    Subscriber access provided by MPI FUR BIOPHYS CHEM Article Echo-Detected Electron Paramagnetic Resonance Spectra of Spin-Labeled Lipids in Membrane Model Systems Denis A. Erilov, Rosa Bartucci, Rita Guzzi, Derek Marsh, Sergei A. Dzuba, and Luigi Sportelli J. Phys. Chem. B, 2004, 108 (14), 4501-4507• DOI: 10.1021/jp037249y • Publication Date (Web): 16 March 2004 Downloaded from http://pubs.acs.org on March 24, 2009 More About This Article Additional resources and features associated with this article are available within the HTML version: • Supporting Information • Links to the 1 articles that cite this article, as of the time of this article download • Access to high resolution figures • Links to articles and content related to this article • Copyright permission to reproduce figures and/or text from this article The Journal of Physical Chemistry B is published by the American Chemical Society. 1155 Sixteenth Street N.W., Washington, DC 20036 J. Phys. Chem. B 2004, 108, 4501-4507 4501 Echo-Detected Electron Paramagnetic Resonance Spectra of Spin-Labeled Lipids in Membrane Model Systems Denis A. Erilov,†,| Rosa Bartucci,*,† Rita Guzzi,† Derek Marsh,§ Sergei A. Dzuba,‡ and Luigi Sportelli† Dipartimento di Fisica and Unita` INFM, UniVersita` della Calabria, I-87036 ArcaVacata di Rende (CS), Italy, Abteilung Spektroskopie, Max-Planck-Institut fur biophysikalische Chemie, 37077 Gottingen, Germany, and Institute of Chemical Kinetics and Combustion, Russian Academy of Science, 630090 NoVosibirsk, Russian Federation ReceiVed: October 28, 2003; In Final Form: February 5, 2004 The dynamics of spin-labeled lipid chains in the low-temperature phases of dipalmitoyl phosphatidylcholine (DPPC) membranes, with and without equimolar cholesterol, have been investigated by pulsed electron paramagnetic resonance (EPR) spectroscopy.
    [Show full text]
  • A New Mechanism for Electron Spin Echo Envelope Modulation ͒ John J
    THE JOURNAL OF CHEMICAL PHYSICS 122, 174504 ͑2005͒ A new mechanism for electron spin echo envelope modulation ͒ John J. L. Mortona Department of Materials, Oxford University, Oxford OX1 3PH, United Kingdom Alexei M. Tyryshkin Department of Electrical Engineering, Princeton University, Princeton, New Jersey 08544 Arzhang Ardavan Clarendon Laboratory, Department of Physics, Oxford University, Oxford OX1 3PU, United Kingdom Kyriakos Porfyrakis Department of Materials, Oxford University, Oxford OX1 3PH, United Kingdom S. A. Lyon Department of Electrical Engineering, Princeton University, Princeton, New Jersey 08544 G. Andrew D. Briggs Department of Materials, Oxford University, Oxford OX1 3PH, United Kingdom ͑Received 21 January 2005; accepted 18 February 2005; published online 2 May 2005͒ Electron spin echo envelope modulation ͑ESEEM͒ has been observed for the first time from a coupled heterospin pair of electron and nucleus in liquid solution. Previously, modulation effects in spin-echo experiments have only been described in liquid solutions for a coupled pair of homonuclear spins in nuclear magnetic resonance or a pair of resonant electron spins in electron paramagnetic resonance. We observe low-frequency ESEEM ͑26 and 52 kHz͒ due to a new mechanism present for any electron spin with SϾ1/2 that is hyperfine coupled to a nuclear spin. In ͑ ͒ ͑ ͒ our case these are electron spin S=3/2 and nuclear spin I=1 in the endohedral fullerene N@C60. The modulation is shown to arise from second-order effects in the isotropic hyperfine coupling of an electron and 14N nucleus. © 2005 American Institute of Physics. ͓DOI: 10.1063/1.1888585͔ I. INTRODUCTION electron spins with different Larmor frequencies͒ results in no modulation effects from this mechanism: The heterospin Measuring the modulation of a spin echo in pulsed coupling energy changes its sign upon application of the re- magnetic-resonance experiments has become a popular tech- focusing pulse ͑because only one spin flips͒, and the magne- nique for studying weak spin-spin couplings.
    [Show full text]
  • Lesion Enhancement in Radio-Frequency Spoiled Gradient-Echo Imaging: Theory, Experimental Evaluation, and Clinical Implications
    Lesion Enhancement in Radio-Frequency Spoiled Gradient-Echo Imaging: Theory, Experimental Evaluation, and Clinical Implications 1 1 2 1 Scott Rand, Kenneth R. Maravilla, • and Udo Schmiedl PURPOSE: To investigate the lesser lesion conspicuity after gadolinium contrast infusion with radio-frequency spoiled gradient-echo (SPGR) sequences relative to conventional T1-weighted spin-echo techniques. METHODS: The influences of repetition time, echo time, and flip angle on spin-echo and SPGR signal were studied with mathematical modeling of the image signal amplitude for concentrations of gadopentetate dimeglumine solute from 0 to 10 mM. Predictions of signal strength were verified in vitro by imaging of a doped water phantom. The effects of standard (0.1 mmol/kg) and high-dose (0.3 mmol/kg) gadoteridol on spin-echo and SPGR images were also investigated in three patients. RESULTS: The measured amplitude of undoped water and the rate of increase of doped water signal with increasing gadopentetate concentration (slope) for spin­ echo 600/ 11/1/ 90° (repetition time/ echo time/excitations/flip angle) and SPGR (600/11/190°) were similar and exceeded those of SPGR (35/ 5/ 145°). Greater increases in SPGR doped water signal and its slope were produced by increasing TR than by varying echo-time or flip angle. The subjective lesion conspicuity and measured lesion contrast at 0.3 mmol/kg were greater with spin­ echo (600/11/ 1/90°) than with SPGR (35/5/145°) in all three patients; the measured lesion enhancement was similar for both techniques in two patients and decreased for SPGR in the third patient.
    [Show full text]
  • Introduction to Neutron Spin Echo Spectroscopy
    6/15/12 Introduction to Neutron Spin Echo Spectroscopy Antonio Faraone NIST Center for Neutron research & Dept. of Material Science and Engineering, U. of Maryland Methods and Applicaons of SANS, NR, and NSE NCNR, June 18th – 23rd, 2012 Outline • History • Dynamic Neutron Scattering (Recap) • The principles of Neutron Spin Echo • Instrumental Setup of Neutron Spin Echo • Conclusion 1 6/15/12 The beginning F. Mezei, Z. Physik. 255, 146 (1972). NSE Today in the World SPAN MUSES RESEDA NG5-NSE IN11 J-NSE IN15 (SNS-NSE) iNSE + NSE option for triple-axis spectrometers! + developing ones! 2 6/15/12 What does a NSE Spectrometer Look Like? IN-11 @ ILL The first IN-11c @ ILL; Wide Detector Option 3 6/15/12 IN-15 @ ILL MUSES, Resonance Spin Echo @ LLB 4 6/15/12 NSE @ NCNR NSE @ SNS 5 6/15/12 NSE Publications 60 total number of Papers Spectrometer polymer 50 glass membrane SolidStatePhysics 40 Further improvement and development of P. G. de Gennes the NSE technique! Nobel Prize in Physics 1991 30 The technique papers Number ofPapers Number 20 discovery of the principle are still increasing by F. Mezei in 1972 10 polymer dynamics researches by D. Richter in 1980’s 0 1975 1980 1985 1990 1995 2000 2005 Year publication record; searched using web of science: keyword=neutron spin echo! 6 6/15/12 Static and Dynamic Scattering Sample ki, Ei θ ki Probe: photons (visible light, X-rays), kf Q neutrons, electrons, … kf, Ef Momentum Exchanged: Q=ki-kf Energy Exchanged: E=Ei-Ef Detector dσ d 2σ StaticScattering: ≈ S(Q) Dynamic Scattering: ≈ S(Q, E) dΩ dΩdE Static and Dynamic Scattering S(Q) = FTS {exp[−iQ(ri −r j )] } Fourier Transform of the Space Correlation Function S(Q, E) = FTT {exp[−iQ(r(t) −r(0))] }= FTT {I(Q,t)}= FTST {G(r,t)} Fourier Transform of the Space-Time Correlation Function I(Q,t) Intermediate Scattering Function (ISF) G(r,t) van Hove Correlation Function 7 6/15/12 S(Q,E) Inelastic Scattering Q=x.xx Å-1 excitation: neutrons Instrumental exchange energy with an Resolution oscillatory motion which has a finite energy transfer Quasielastic Ex: phonon, magnon, ..
    [Show full text]
  • Pulsed Epr Primer
    PULSED EPR PRIMER Dr. Ralph T. Weber Bruker Instruments, Inc. Billerica, MA USA Pulsed EPR Primer Copyright © 2000 Bruker Instruments, Inc. The text, figures, and programs have been worked out with the utmost care. However, we cannot accept either legal responsibility or any liability for any incorrect statements which may remain, and their consequences. The following publication is protected by copyright. All rights reserved. No part of this publication may be reproduced in any form by photocopy, microfilm or other proce- dures or transmitted in a usable language for machines, in particular data processing systems with- out our written authorization. The rights of reproduction through lectures, radio and television are also reserved. The software and hardware descriptions referred in this manual are in many cases registered trademarks and as such are subject to legal requirements. Preface I gratefully acknowledge the many useful comments and discus- sions with Professor Gareth Eaton of the University of Denver and Dr. Peter Hoefer of Bruker Analytik. This document is best viewed with Adobe AcrobatTM 4.0. If you are using a PC running Microsoft WindowsTM, you can also view the several animations that are interspersed throughout the text. Simply click the movie poster with the blue frame and the movie will play in a floating window. To close the floating win- dow, place your cursor in the frame and press the <Esc> key. A Movie Poster iv Table of Contents 1 Pulse EPR Theory..................................................................3 1.1 The Rotating Frame..................................................................................... 3 Magnetization in the Lab Frame ................................................................... 4 Magnetization in the Rotating Frame ........................................................... 6 Viewing the Magnetization from Both Frames: The FID ..........................
    [Show full text]
  • AN ABSTRACT for the THESIS of Jacqueline K. Garcia for the Degree of Master of Science in Radiation Health Physics Presented On
    AN ABSTRACT FOR THE THESIS OF Jacqueline K. Garcia for the degree of Master of Science in Radiation Health Physics presented on June 18, 2020. Title: Creating Anthropomorphic Models with Mesh Phantoms in MCNP to Simulate Mammography Abstract approved: ______________________________________________________________ Steven R. Reese Breast cancer is the most common cancer among women as it accounts for about 25% of all female cancer cases. Studies have shown that early detection of breast cancer increases the chances of a positive prognosis amongst patients therefore it is crucial to provide accurate diagnosis tools in routine exams. Experimenting with new techniques and tools that can provide increased accuracy requires time-consuming and costly studies, therefore, simulating outcomes that have high potential can provide guidance for increased accuracy without requiring expensive tests. This project outlines the possibility of developing an advanced anthropomorphic mesh phantom of the breast to experiment different contrast agents with. The phantom would contain all the components of a real breast and it would be able to simulate the physiological and metabolic components that play a role in the outcome of a real tomosynthesis-mammography scan. This project focuses on creating a basic model of a breast and a tomosynthesis system that provides an indication on whether a simulation system can be produced. The materials used for this project include Abaqus/CAE software, Python, MCNP6.2, and scripting tools as well as resources on tomosynthesis equipment. The results demonstrated a positive outcome thus indicating that the model can be further developed to incorporate the multiple components of a real breast scan to increase the simulation’s realism.
    [Show full text]
  • 1 Spin Echo Method in Pulsed Nuclear Magnetic Resonance (NMR
    Spin echo method in pulsed nuclear magnetic resonance (NMR) Masatsugu Sei Suzuki Department of Physics, SUNY at Binghamton (February 26, 2011) Spin echo method is one of the elegant and most useful features in pulsed nuclear magnetic resonance (NMR). In the Phys.427, 429 (Senior laboratory) and Phys.527 (Graduate laboratory) of Binghamton University (we call simply Advanced laboratory hereafter), both undergraduate and graduate students studies the longitudinal relaxation time T1 and the transverse relaxation time T2 of mineral oil and water solution of CuSO4 using the spin echo method. The instrument we use in the Advanced laboratory is a TeachSpin PS1-A, a pulsed NMR apparatus. It focuses on the spin echo method using the CPMG (Carr-Purcell-Meiboom-Gill) sequence with the combinations of 90 and 180 pulses for the measurement of T1 and T2. Through these studies students will understand the fundamental physics underlying in NMR. From a theoretical view point, the dynamics of nuclear spins is uniquely determined by the Bloch equation. This equations are formed of the first order differential equations. The solutions of these equations with appropriate initial conditions can be exactly solved. The motions of the nuclear spin during the application of the 90 pulse and 180 pulse for the Carr-Purcell (CP) sequence, and Carr- Purcell-Meiboom-Gill (CPMG) sequence, can be visualized using the Mathematica. Here we present a lecture note on the principle of the spin echo method in pulsed NMR, which has been given in the class of the Advanced laboratory. This note may be useful to students who start to do the spin echo experiment of pulsed NMR in the Advanced laboratory.
    [Show full text]
  • Pulsed NMR Review
    Pulsed Nuclear Magnetic Resonance John Stoltenberg, David Pengra, Oscar Vilches, and Robert Van Dyck Department of Physics, University of Washington 3910 15th Ave. NE, Seattle, WA 98195-1560 1 Background What we call “nuclear magnetic resonance” (NMR) was developed simultaneously but independently by Edward Purcell and Felix Bloch in 1946. The experimental method and theoretical interpretation they developed is now called “continuous-wave NMR” (CWNMR). A different experimental technique, called “pulsed NMR” (PNMR), was introduced in 1950 by Erwin Hahn. Pulsed NMR is used in magnetic resonance imaging (MRI). Purcell and Bloch won the Nobel Prize in Physics in 1952 for NMR; more recently NMR was the subject of Nobel Prizes in Chemistry in 1991 and 2002. We have both NMR setups in the advanced labs: one is a variation of the CWNMR method, and the other is a pulsed NMR system. The physics underlying NMR is the same for both the continuous and pulsed methods, but the information obtained may be different. Certainly, the words used to describe what is being done in the experiments are different: in the continuous-wave case one tunes a radio-frequency oscillator to “beat” against the resonance of a nuclear magnetic moment in a magnetic field; in the pulsed case, one applies a sequence of RF pulses called π-pulses (180 degree pulses) or π/2- pulses (90 degree pulses) and looks for “free induction decay” and “spin echoes”. Below, we give a very simplified introduction, based on classical ideas, to the physics of NMR. More thorough discussions, focusing on the CWNMR technique, may be found in in the books by Preston and Dietz [1] and Melissinos [2] (see references).
    [Show full text]