Spermatozoal Gene KO Studies for the Highly Present Paternal Transcripts

Total Page:16

File Type:pdf, Size:1020Kb

Spermatozoal Gene KO Studies for the Highly Present Paternal Transcripts Spermatozoal gene KO studies for the highly present paternal Potential maternal interactions Conclusions of the KO studies on the maternal gene transcripts detected by GeneMANIA candidates for interaction with the paternal Fbxo2 Selective cochlear degeneration in mice lacking Cul1, Fbxl2, Fbxl3, Fbxl5, Cul-1 KO causes early embryonic lethality at E6.5 before Fbxo2 Fbxo34, Fbxo5, Itgb1, Rbx1, the onset of gastrulation http://www.jneurosci.org/content/27/19/5163.full Skp1a http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3641602/. Loss of Cul1 results in early embryonic lethality and Another KO study showed the following: Loss of dysregulation of cyclin E F-box only protein 2 (Fbxo2) disrupts levels and http://www.ncbi.nlm.nih.gov/pubmed/10508527?dopt=Abs localization of select NMDA receptor subunits, tract. and promotes aberrant synaptic connectivity http://www.ncbi.nlm.nih.gov/pubmed/25878288. Fbxo5 (or Emi1): Regulates early mitosis. KO studies shown lethal defects in preimplantation embryo A third KO study showed that Fbxo2 regulates development http://mcb.asm.org/content/26/14/5373.full. amyloid precursor protein levels and processing http://www.jbc.org/content/289/10/7038.long#fn- Rbx1/Roc1: Rbx1 disruption results in early embryonic 1. lethality due to proliferation failure http://www.pnas.org/content/106/15/6203.full.pdf & Fbxo2 has been found to be involved in http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2732615/. neurons, but it has not been tested for potential decreased fertilization or pregnancy rates. It Skp1a: In vivo interference with Skp1 function leads to shows high expression levels in testis, indicating genetic instability and neoplastic transformation potential other not investigated functions http://www.ncbi.nlm.nih.gov/pubmed/12417738?dopt=Abs http://biogps.org/#goto=genereport&id=230904 tract. & http://www.informatics.jax.org/image/MGI:26820 38. Map1lc3a Atg10, Atg3, Gabarapl2, Kif15, Atg3: Atg3-deficient mice were born and died 1 day after Map1b, Map1lc3b, Pias4, birth http://www.molbiolcell.org/content/19/11/4762.full. Tubb2a, Wdfy3 Map1b is involved in neural-diseases. Perinatal lethality of microtubule-associated protein 1B-deficient mice expressing alternative isoforms of the protein at low levels. Homozygous mice died on the first day after birth, probably due to a severe abnormal development of the nervous system. They present alterations in the structure of several brain regions http://www.ncbi.nlm.nih.gov/pubmed/11085878?dopt=Abs tract. Pcbp4 Mice deficient in poly(C)-binding protein 4 are Pcbp1, Pcbp2, Qk, Hnrnpk Qk (Quaking): Mature mice may have seizures in which a susceptible to spontaneous tumors through the motionless posture is maintained for many seconds. increased expression of ZFP871 that targets Females are viable and fertile and males are sterile due to p53 for degradation defective spermatic differentiation. The entire CNS of http://genesdev.cshlp.org/content/early/2016/02/ quaking mutant mice is severely deficient in myelin and 24/gad.271890.115. there is a less severe myelin deficiency in the PNS. Homozygous quaking alleles show increased embryo lethality http://www.ncbi.nlm.nih.gov/pubmed/21189687. Hnrnpk: Coordinates Transcriptional Silencing by SETDB1 in Embryonic Stem Cells. Zfp821 No KO studies found, but Zfp821 is expressed in Aggf1, Chchd3, Fam13c, Fchsd2, Rimklb: Females homozygous for the mutation appear to reproductive system Mob1a, Rimklb , Tspyl4, Zfc3h1 be infertile https://www.jax.org/strain/022346. http://www.informatics.jax.org/marker/MGI:1923 121. Hdac11 HDAC11 KO studies showed immunological Aamp, Bub1b, Cdc20, Hdac2, Bub1b: Homozygous embryos do not survive beyond aberrations. No disease or developmental Hdac8, Mettl18, Nelfcd early gestation (E8.5) due to impaired blastocyst aberrations were reported, however, the effect of proliferation and extensive apoptosis. Mouse embryonic KO males needs to be further investigated fibroblasts from heterozygous mice exhibit defective http://www.ncbi.nlm.nih.gov/pmc/articles/PMC42 spindle checkpoint activation, an important mechanism for 52813/. genomic stability. In addition, mice are susceptible to development of lung and colon adenocarcinomas No study investigated the homozygous C57/BL6 following challenge with carcinogen. Mice homozygous for KO Hdac11 regarding the fertilization and the mutation are embryonic lethal. This mutant mouse pregnancy rates. strain may be useful in studies of early embryonic development, hematopoiesis, megakaryopoiesis tumorigenesis and genomic instability https://www.jax.org/strain/010495. Cdc20: Cdc20 is critical for meiosis I and fertility of female mice http://www.ncbi.nlm.nih.gov/pubmed/20941357?dopt=Abs tract. Loss of Cdc20 causes a securin-dependent metaphase arrest in two-cell mouse embryos. http://www.ncbi.nlm.nih.gov/pubmed/17325031?dopt=Abs tract No homozygous mice were detected from heterozygous intercrosses at wean (n>28 pups) https://www.jax.org/strain/018590. Hdac2: Homozygous KO mice are born at a 2-fold lower frequency than predicted by Mendelian ratios and showed compromised fertility. Both male and female homozygous knockout mice are approximately 25% smaller than wildtype and heterozygous littermates https://www.jax.org/strain/022625. Supplementary Table 2 .
Recommended publications
  • Autophagy Patterns and Prognosis in Uveal Melanomas
    Modern Pathology (2011) 24, 1036–1045 1036 & 2011 USCAP, Inc. All rights reserved 0893-3952/11 $32.00 Autophagy patterns and prognosis in uveal melanomas Alexandra N Giatromanolaki1, Georgios St Charitoudis2, Nikolaos E Bechrakis3, Vassilios P Kozobolis4, Michael I Koukourakis5, Michael H Foerster2 and Efthimios L Sivridis1 1Department of Pathology, Democritus University of Thrace Medical School, Alexandroupolis, Greece; 2Department of Ophthalmology, Charite´ Medical University, Campus Benjamin Franklin, Berlin, Germany; 3Department of Ophthalmology, University of Innsbruck Medical School, Innsbruck, Austria; 4Department of Ophthalmology, Democritus University of Thrace Medical School, Alexandroupolis, Greece and 5Department of Radiotherapy/Oncology, Democritus University of Thrace Medical School, Alexandroupolis, Greece Autophagy is a self-degradation mechanism by which cells recycle their own cytoplasmic constituents. It has been claimed that, under certain conditions, such a process may be associated with tumor progression. In this study, the autophagic activity was investigated in a series of 99 uveal melanomas after immunohistochemical staining for the autophagy-associated proteins MAP1LC3A and BECN1, most commonly known as LC3A and Beclin 1, respectively. These were assessed in parallel with the hypoxia-inducible factor 1a (HIF1A) and its downstream protein lactate dehydrogenase 5 (composed by five LDHA subunits). Increased autophagic reactivity, detected by MAP1LC3A or BECN1, was associated with intense pigmentation and tumor hypoxia. Uveal melanomas with extensive overexpression of BECN1 or those with underexpression of this protein were associated with the worst prognosis, but the former manifested metastases much earlier than the latter; only 58% of patients with extensive BECN1 overexpression were alive at 4 years, compared with 80% of patients with underexpressed patterns.
    [Show full text]
  • MCG10 (PCBP4) (NM 033008) Human Recombinant Protein Product Data
    OriGene Technologies, Inc. 9620 Medical Center Drive, Ste 200 Rockville, MD 20850, US Phone: +1-888-267-4436 [email protected] EU: [email protected] CN: [email protected] Product datasheet for TP300749 MCG10 (PCBP4) (NM_033008) Human Recombinant Protein Product data: Product Type: Recombinant Proteins Description: Recombinant protein of human poly(rC) binding protein 4 (PCBP4), transcript variant 3 Species: Human Expression Host: HEK293T Tag: C-Myc/DDK Predicted MW: 41.3 kDa Concentration: >50 ug/mL as determined by microplate BCA method Purity: > 80% as determined by SDS-PAGE and Coomassie blue staining Buffer: 25 mM Tris.HCl, pH 7.3, 100 mM glycine, 10% glycerol Preparation: Recombinant protein was captured through anti-DDK affinity column followed by conventional chromatography steps. Storage: Store at -80°C. Stability: Stable for 12 months from the date of receipt of the product under proper storage and handling conditions. Avoid repeated freeze-thaw cycles. RefSeq: NP_127501 Locus ID: 57060 UniProt ID: P57723, A0A024R2Y0 RefSeq Size: 2040 Cytogenetics: 3p21.2 RefSeq ORF: 1209 Synonyms: CBP; LIP4; MCG10 This product is to be used for laboratory only. Not for diagnostic or therapeutic use. View online » ©2021 OriGene Technologies, Inc., 9620 Medical Center Drive, Ste 200, Rockville, MD 20850, US 1 / 2 MCG10 (PCBP4) (NM_033008) Human Recombinant Protein – TP300749 Summary: This gene encodes a member of the KH-domain protein subfamily. Proteins of this subfamily, also referred to as alpha-CPs, bind to RNA with a specificity for C-rich pyrimidine regions. Alpha-CPs play important roles in post-transcriptional activities and have different cellular distributions.
    [Show full text]
  • MAP1LC3 Antibody Cat
    MAP1LC3 Antibody Cat. No.: 7951 MAP1LC3 Antibody Immunohistochemistry of MAP1LC3 in rat brain tissue with MAP1LC3 antibody at 5 μg/ml. Specifications HOST SPECIES: Rabbit SPECIES REACTIVITY: Human, Mouse, Rat HOMOLOGY: Predicted species reactivity based on immunogen sequence: Bovine: (100%) MAP1LC3 antibody was raised against a 12 amino acid peptide near the center of human MAP1LC3A. IMMUNOGEN: The immunogen is located within amino acids 20 - 70 of MAP1LC3. TESTED APPLICATIONS: ELISA, IHC-P, WB September 29, 2021 1 https://www.prosci-inc.com/map1lc3-antibody-7951.html MAP1LC3 antibody can be used for detection of MAP1LC3 by Western blot at 0.5 - 1 μg/ml. Antibody can also be used for Immunohistochemistry starting at 5 μg/mL. APPLICATIONS: Antibody validated: Western Blot in human samples and Immunohistochemistry in rat samples. All other applications and species not yet tested. MAP1LC3 antibody is human, mouse and rat reactive. Multiple isoforms MAP1LC3 are SPECIFICITY: known to exist. MAP1LC3 antibody is predicted to detect MAP1LC3A, MAP1LC3B, and MAP1LC3C. POSITIVE CONTROL: 1) Cat. No. 1303 - Human Brain Tissue Lysate Predicted: 13 kDa PREDICTED MOLECULAR WEIGHT: Observed: 18 kDa Properties PURIFICATION: MAP1LC3 antibody is affinity chromatography purified via peptide column. CLONALITY: Polyclonal ISOTYPE: IgG CONJUGATE: Unconjugated PHYSICAL STATE: Liquid BUFFER: MAP1LC3 antibody is supplied in PBS containing 0.02% sodium azide. CONCENTRATION: 1 mg/mL MAP1LC3 antibody can be stored at 4˚C for three months and -20˚C, stable for up to one STORAGE CONDITIONS: year. Additional Info OFFICIAL SYMBOL: MAP1LC3A MAP1LC3 Antibody: LC3, LC3A, ATG8E, MAP1ALC3, MAP1BLC3Autophagy-related protein ALTERNATE NAMES: LC3 A ACCESSION NO.: NP_115903 PROTEIN GI NO.: 14210522 GENE ID: 84557 USER NOTE: Optimal dilutions for each application to be determined by the researcher.
    [Show full text]
  • De Novo EIF2AK1 and EIF2AK2 Variants Are Associated with Developmental Delay, Leukoencephalopathy, and Neurologic Decompensation
    bioRxiv preprint doi: https://doi.org/10.1101/757039; this version posted September 16, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. De novo EIF2AK1 and EIF2AK2 variants are associated with developmental delay, leukoencephalopathy, and neurologic decompensation Dongxue Mao1,2, Chloe M. Reuter3,4, Maura R.Z. Ruzhnikov5,6, Anita E. Beck7, Emily G. Farrow8,9,10, Lisa T. Emrick1,11,12,13, Jill A. Rosenfeld12, Katherine M. Mackenzie5, Laurie Robak2,12,13, Matthew T. Wheeler3,14, Lindsay C. Burrage12,13, Mahim Jain15, Pengfei Liu12, Daniel Calame11,13, Sebastien Küry17,18, Martin Sillesen19, Klaus Schmitz-Abe20, Davide Tonduti21, Luigina Spaccini22, Maria Iascone23, Casie A. Genetti20, Madeline Graf16, Alyssa Tran12, Mercedes Alejandro12, Undiagnosed Diseases Network, Brendan H. Lee12,13, Isabelle Thiffault8,9,24, Pankaj B. Agrawal#,20, Jonathan A. Bernstein#,3,25, Hugo J. Bellen#,2,12,26,27,28, Hsiao- Tuan Chao#,1,2,11,12,13,28,27,29 #Correspondence should be addressed: [email protected] (P.A.), [email protected] (J.A.B.), [email protected] (H.J.B.), [email protected] (H.T.C.) 1Department of Pediatrics, Baylor College of Medicine (BCM), Houston, TX 2Jan and Dan Duncan Neurological Research Institute, Texas Children’s Hospital, Houston, TX 3Stanford Center for Undiagnosed Diseases, Stanford University, Stanford, CA 4Stanford Center for Inherited Cardiovascular Disease, Division of Cardiovascular Medicine,
    [Show full text]
  • Autophagy Is a New Protective Mechanism Against the Cytotoxicity
    www.nature.com/scientificreports OPEN Autophagy is a new protective mechanism against the cytotoxicity of platinum nanoparticles in human Received: 14 November 2018 Accepted: 11 February 2019 trophoblasts Published: xx xx xxxx Akitoshi Nakashima1, Kazuma Higashisaka2,3, Tae Kusabiraki1, Aiko Aoki1, Akemi Ushijima1, Yosuke Ono1, Sayaka Tsuda1, Tomoko Shima1, Osamu Yoshino1,7, Kazuya Nagano2, Yasuo Yoshioka2,4,5, Yasuo Tsutsumi2,6 & Shigeru Saito1 Nanoparticles are widely used in commodities, and pregnant women are inevitably exposed to these particles. The placenta protects the growing fetus from foreign or toxic materials, and provides energy and oxygen. Here we report that autophagy, a cellular mechanism to maintain homeostasis, engulfs platinum nanoparticles (nPt) to reduce their cytotoxicity in trophoblasts. Autophagy was activated by nPt in extravillous trophoblast (EVT) cell lines, and EVT functions, such as invasion and vascular remodeling, and proliferation were inhibited by nPt. These inhibitory efects by nPt were augmented in autophagy-defcient cells. Regarding the dynamic state of nPt, analysis using ICP-MS demonstrated a higher accumulation of nPt in the autophagosome-rich than the cytoplasmic fraction in autophagy- normal cells. Meanwhile, there were more nPt in the nuclei of autophagy-defcient cells, resulting in greater DNA damage at a lower concentration of nPt. Thus, we found a new protective mechanism against the cytotoxicity of nPt in human trophoblasts. Pregnant women and developing fetuses are very susceptible to foreign toxins, including air pollutants, microbes, and nanoparticles1–3. Smaller nanoparticles made of silica, titanium dioxide, cobalt and chromium, gold, or silver cross the fetal-maternal barrier more readily than larger particles4–7.
    [Show full text]
  • Aneuploidy: Using Genetic Instability to Preserve a Haploid Genome?
    Health Science Campus FINAL APPROVAL OF DISSERTATION Doctor of Philosophy in Biomedical Science (Cancer Biology) Aneuploidy: Using genetic instability to preserve a haploid genome? Submitted by: Ramona Ramdath In partial fulfillment of the requirements for the degree of Doctor of Philosophy in Biomedical Science Examination Committee Signature/Date Major Advisor: David Allison, M.D., Ph.D. Academic James Trempe, Ph.D. Advisory Committee: David Giovanucci, Ph.D. Randall Ruch, Ph.D. Ronald Mellgren, Ph.D. Senior Associate Dean College of Graduate Studies Michael S. Bisesi, Ph.D. Date of Defense: April 10, 2009 Aneuploidy: Using genetic instability to preserve a haploid genome? Ramona Ramdath University of Toledo, Health Science Campus 2009 Dedication I dedicate this dissertation to my grandfather who died of lung cancer two years ago, but who always instilled in us the value and importance of education. And to my mom and sister, both of whom have been pillars of support and stimulating conversations. To my sister, Rehanna, especially- I hope this inspires you to achieve all that you want to in life, academically and otherwise. ii Acknowledgements As we go through these academic journeys, there are so many along the way that make an impact not only on our work, but on our lives as well, and I would like to say a heartfelt thank you to all of those people: My Committee members- Dr. James Trempe, Dr. David Giovanucchi, Dr. Ronald Mellgren and Dr. Randall Ruch for their guidance, suggestions, support and confidence in me. My major advisor- Dr. David Allison, for his constructive criticism and positive reinforcement.
    [Show full text]
  • The Association of ATG16L1 Variations with Clinical Phenotypes of Adult-Onset Still’S Disease
    G C A T T A C G G C A T genes Article The Association of ATG16L1 Variations with Clinical Phenotypes of Adult-Onset Still’s Disease Wei-Ting Hung 1,2, Shuen-Iu Hung 3 , Yi-Ming Chen 4,5,6 , Chia-Wei Hsieh 6,7, Hsin-Hua Chen 6,7,8 , Kuo-Tung Tang 5,6,7 , Der-Yuan Chen 9,10,11,* and Tsuo-Hung Lan 1,5,12,13,* 1 Institute of Clinical Medicine, National Yang-Ming Chiao Tung University, Taipei 11221, Taiwan; [email protected] 2 Department of Medical Education, Taichung Veterans General Hospital, Taichung 40705, Taiwan 3 Cancer Vaccine and Immune Cell Therapy Core Laboratory, Chang Gung Immunology Consortium, Chang Gung Memorial Hospital, Linkou, Taoyuan 33305, Taiwan; [email protected] 4 Department of Medical Research, Taichung Veterans General Hospital, Taichung 40705, Taiwan; [email protected] 5 School of Medicine, College of Medicine, National Yang Ming Chiao Tung University, Taipei 11221, Taiwan; [email protected] 6 Rong Hsing Research Center for Translational Medicine & Ph.D. Program in Translational Medicine, National Chung Hsing University, Taichung 40227, Taiwan; [email protected] (C.-W.H.); [email protected] (H.-H.C.) 7 Division of Allergy, Immunology, and Rheumatology, Taichung Veterans General Hospital, Taichung 40705, Taiwan 8 Department of Industrial Engineering and Enterprise Information, Tunghai University, Taichung 40705, Taiwan 9 Translational Medicine Laboratory, Rheumatology and Immunology Center, China Medical University Hospital, Taichung 40447, Taiwan 10 Rheumatology and Immunology Center, China Medical University Hospital, Taichung 40447, Taiwan Citation: Hung, W.-T.; Hung, S.-I.; 11 School of Medicine, China Medical University, Taichung 40447, Taiwan Chen, Y.-M.; Hsieh, C.-W.; Chen, 12 Tsao-Tun Psychiatric Center, Ministry of Health and Welfare, Nantou 54249, Taiwan H.-H.; Tang, K.-T.; Chen, D.-Y.; Lan, 13 Center for Neuropsychiatric Research, National Health Research Institutes, Miaoli 35053, Taiwan T.-H.
    [Show full text]
  • Investigation of the Protein-Protein Interaction Between PCBP1 and Y -Synuclein Amanda Hunkele Seton Hall University
    Seton Hall University eRepository @ Seton Hall Seton Hall University Dissertations and Theses Seton Hall University Dissertations and Theses (ETDs) 2010 Investigation of the Protein-Protein Interaction Between PCBP1 and y -synuclein Amanda Hunkele Seton Hall University Follow this and additional works at: https://scholarship.shu.edu/dissertations Part of the Biology Commons Recommended Citation Hunkele, Amanda, "Investigation of the Protein-Protein Interaction Between PCBP1 and y -synuclein" (2010). Seton Hall University Dissertations and Theses (ETDs). 685. https://scholarship.shu.edu/dissertations/685 Investigation of the protein-protein interaction between PCBPl and y-synuclein Amanda Hunkeie Submitted in partial fulfiient of the requiremenk for the Degree of Master of Science in Biology from the Department of Biology of Seton HaU University September 2010 APPROVED BY I I Jane L. K0,'Ph.D. Mentor &2_3 -kfeping Zhou, Pb. D. Committee Member Tin-Chun C~U,Ph.D. Committee Member - ~arrohhawn,Ph.D. Director of Graduate Studies Chairperson, Department of Biological Sciences Acknowledgements I first want to thank my mentor, Dr. Jane KO, for her continued support and encouragement throughout my research project. Her patience and enthusiasm made this a very rewarding experience. I would also like to thank my committee members, Dr. Zhou and Dr. Chu, for their time and contribution to this project. Also, I would like to thank the Biology department faculty for all their guidance and contributions to my academic development. Additionally I would like to thank the other members of Dr. KO's lab for all their help academically and their f?iendship. Their support tmly helped me through this research experience.
    [Show full text]
  • Photodynamic Therapy Induces Autophagy-Mediated Cell Death In
    Song et al. Cell Death and Disease (2020) 11:938 https://doi.org/10.1038/s41419-020-03136-y Cell Death & Disease ARTICLE Open Access Photodynamic therapy induces autophagy- mediated cell death in human colorectal cancer cells via activation of the ROS/JNK signaling pathway Changfeng Song1,WenXu1,HongkunWu2,XiaotongWang1,QianyiGong1,ChangLiu2,JianwenLiu1 and Lin Zhou2 Abstract Evidence has shown that m-THPC and verteporfin (VP) are promising sensitizers in photodynamic therapy (PDT). In addition, autophagy can act as a tumor suppressor or a tumor promoter depending on the photosensitizer (PS) and the cancer cell type. However, the role of autophagy in m-THPC- and VP-mediated PDT in in vitro and in vivo models of human colorectal cancer (CRC) has not been reported. In this study, m-THPC-PDT or VP-PDT exhibited significant phototoxicity, inhibited proliferation, and induced the generation of large amounts of reactive oxygen species (ROS) in CRC cells. From immunoblotting, fluorescence image analysis, and transmission electron microscopy, we found extensive autophagic activation induced by ROS in cells. In addition, m-THPC-PDT or VP-PDT treatment significantly induced apoptosis in CRC cells. Interestingly, the inhibition of m-THPC-PDT-induced autophagy by knockdown of ATG5 or ATG7 substantially inhibited the apoptosis of CRC cells. Moreover, m-THPC- PDT treatment inhibited tumorigenesis of subcutaneous HCT116 xenografts. Meanwhile, antioxidant treatment 1234567890():,; 1234567890():,; 1234567890():,; 1234567890():,; markedly inhibited autophagy and apoptosis induced by PDT in CRC cells by inactivating JNK signaling. In conclusion, inhibition of autophagy can remarkably alleviate PDT-mediated anticancer efficiency in CRC cells via inactivation of the ROS/JNK signaling pathway.
    [Show full text]
  • Characterization of Poly (Rc) Binding Protein (Pcbp2) and Frataxin Sudipa Ghimire-Rijal Wayne State University
    Wayne State University Wayne State University Theses 1-1-2011 Characterization of poly (rc) binding protein (pcbp2) and frataxin Sudipa Ghimire-Rijal Wayne State University Follow this and additional works at: http://digitalcommons.wayne.edu/oa_theses Part of the Biochemistry Commons Recommended Citation Ghimire-Rijal, Sudipa, "Characterization of poly (rc) binding protein (pcbp2) and frataxin" (2011). Wayne State University Theses. Paper 71. This Open Access Thesis is brought to you for free and open access by DigitalCommons@WayneState. It has been accepted for inclusion in Wayne State University Theses by an authorized administrator of DigitalCommons@WayneState. CHARACTERIZATION OF POLY (rC) BINDING PROTEIN (PCBP2) AND FRATAXIN by SUDIPA GHIMIRE-RIJAL THESIS Submitted to the Graduate School of Wayne State University, Detroit, Michigan in partial fulfillment of the requirements for the degree of MASTERS IN SCIENCE 2011 MAJOR: BIOCHEMISTRY AND MOLECULAR BIOLOGY Approved by: Advisor Date ACKNOWLEDGMENTS My deepest gratitude goes to my adviser Dr. Timothy L. Stemmler for all his support, encouragement and enthusiasm for the research. He has been very supportive and encouraging through the times which helped me to grow as a budding scientist. I will be forever grateful to you for all the support and guidance that I received while pursuing my MS degree. I am also thankful to my committee members Dr. Brian F. P. Edwards and Dr. Bharati Mitra for their encouragement and constructive comments which helped me to develop a passion for research. I am thankful to my former and present lab members; Jeremy, Swati, Madhusi, Poorna, Andrea, April, Yogapriya for creating a friendly lab environment.
    [Show full text]
  • MAP1LC3A Antibody [E2F7] Cat
    MAP1LC3A Antibody [E2F7] Cat. No.: 14-019 MAP1LC3A Antibody [E2F7] Immunohistochemistry of paraffin-embedded mouse Immunohistochemistry of paraffin-embedded human liver brain using MAP1LC3A antibody (14-019) at dilution of using MAP1LC3A antibody (14-019) at dilution of 1:100 (40x 1:100 (40x lens). lens). Immunohistochemistry of paraffin-embedded mouse Immunofluorescence analysis of HeLa cells using MAP1LC3A liver using MAP1LC3A antibody (14-019) at dilution of antibody (14-019). 1:100 (40x lens). Immunofluorescence analysis of PC-12 cells using MAP1LC3A antibody (14-019). Immunofluorescence analysis of HUVEC cells using MAP1LC3A antibody (14-019). September 24, 2021 1 https://www.prosci-inc.com/map1lc3a-antibody-e2f7-14-019.html Specifications HOST SPECIES: Rabbit SPECIES REACTIVITY: Human, Mouse, Rat IMMUNOGEN: Recombinant protein of human MAP1LC3A TESTED APPLICATIONS: IF, IHC, IP, WB WB: ,1:500 - 1:2000 IHC: ,1:50 - 1:200 APPLICATIONS: IF: ,1:50 - 1:200 IP: ,1:20 - 1:50 POSITIVE CONTROL: 1) SHG-44 2) Mouse brain 3) Mouse liver 4) Mouse skeletal muscle PREDICTED MOLECULAR Observed: 14kDa WEIGHT: Properties PURIFICATION: Affinity purification CLONALITY: Monoclonal ISOTYPE: IgG CONJUGATE: Unconjugated PHYSICAL STATE: Liquid BUFFER: PBS with 0.02% sodium azide, 50% glycerol, pH7.3. STORAGE CONDITIONS: Store at -20˚C. Avoid freeze / thaw cycles. Additional Info OFFICIAL SYMBOL: MAP1LC3A MAP1LC3A Antibody: LC3, LC3A, ATG8E, MAP1ALC3, MAP1BLC3Autophagy-related protein ALTERNATE NAMES: LC3 A GENE ID: 84557 USER NOTE: Optimal dilutions for each application to be determined by the researcher. September 24, 2021 2 https://www.prosci-inc.com/map1lc3a-antibody-e2f7-14-019.html Background and References MAP1A and MAP1B are microtubule-associated proteins which mediate the physical interactions between microtubules and components of the cytoskeleton.
    [Show full text]
  • And Inflammation-Related Gene Expression in White Blood
    cells Article Post-Effort Changes in Autophagy- and Inflammation-Related Gene Expression in White Blood Cells of Healthy Young Men Dorota Kostrzewa-Nowak 1,* , Alicja Trzeciak-Ryczek 2,3, Paweł Wityk 4 , Danuta Cembrowska-Lech 2,3 and Robert Nowak 1 1 Centre for Human Structural and Functional Research, Institute of Physical Culture Sciences, University of Szczecin, 17C Narutowicza St., 70-240 Szczecin, Poland; [email protected] 2 Institute of Biology, University of Szczecin, 13 W ˛askaSt., 71-415 Szczecin, Poland; [email protected] (A.T.-R.); [email protected] (D.C.-L.) 3 The Centre for Molecular Biology and Biotechnology, University of Szczecin, 13 W ˛askaSt., 71-415 Szczecin, Poland 4 Faculty of Chemistry, Gda´nskUniversity of Technology, 11/12 Narutowicza St., 80-233 Gda´nsk,Poland; [email protected] * Correspondence: [email protected] Abstract: Acute, strenuous physical exertion requiring high levels of energy production induces the production of reactive oxygen species and metabolic disturbances that can damage the mitochondria. Thus, selective autophagic elimination of defective mitochondria may improve resistance to oxidative stress and potentially to inflammation. The main goal of this study was to evaluate the impacts of intense effort on changes in the expression of select genes related to post-effort inflammation and autophagy. Thirty-five men aged 16–21 years were recruited to the study. The impacts of both aerobic Citation: Kostrzewa-Nowak, D.; (endurance) and anaerobic (speed) efforts on selected genes encoding chemokines (CXCL5, 8–12) Trzeciak-Ryczek, A.; Wityk, P.; were analyzed.
    [Show full text]