Early Life History Phases As Determinants of Distribution in Pyura Praeputialis (Heller, 1878), a Rocky Shore Ecosystem Engineer Andrew R
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Pyura Doppelgangera to Support Regional Response Decisions
REPORT NO. 2480 BACKGROUND INFORMATION ON THE SEA SQUIRT PYURA DOPPELGANGERA TO SUPPORT REGIONAL RESPONSE DECISIONS CAWTHRON INSTITUTE | REPORT NO. 2480 JUNE 2014 BACKGROUND INFORMATION ON THE SEA SQUIRT PYURA DOPPELGANGERA TO SUPPORT REGIONAL RESPONSE DECISIONS LAUREN FLETCHER Prepared for Marlborough District Council CAWTHRON INSTITUTE 98 Halifax Street East, Nelson 7010 | Private Bag 2, Nelson 7042 | New Zealand Ph. +64 3 548 2319 | Fax. +64 3 546 9464 www.cawthron.org.nz REVIEWED BY: APPROVED FOR RELEASE BY: Javier Atalah Chris Cornelisen ISSUE DATE: 3 June 2014 RECOMMENDED CITATION: Fletcher LM 2014. Background information on the sea squirt, Pyura doppelgangera to support regional response decisions. Prepared for Marlborough District Council. Cawthron Report No. 2480. 30 p. © COPYRIGHT: Cawthron Institute. This publication may be reproduced in whole or in part without further permission of the Cawthron Institute, provided that the author and Cawthron Institute are properly acknowledged. CAWTHRON INSTITUTE | REPORT NO. 2480 JUNE 2014 EXECUTIVE SUMMARY The non-indigenous solitary sea squirt, Pyura doppelgangera (herein Pyura), was first detected in New Zealand in 2007 after a large population was found in the very north of the North Island. A delimitation survey by the Ministry for Primary Industries (MPI) during October 2009 found established populations at 21 locations within the region. It is not known how long Pyura has been present in New Zealand, although it is not believed to be a recent introduction. Pyura is an aggressive interspecific competitor for primary space. As such, this species may negatively impact native green-lipped mussel beds present, with associated impacts to key social and cultural values. -
Grebmeier, Jacqueline M., Lee W.Cooper, and Michael J
Limnol. Oceanogr., 35(S), 1990, 1 182-1195 0 1990, by the American Society of Limnology and Oceanography, Inc. Oxygen isotopic composition of bottom seawater and tunicate cellulose used as indicators of water masses in the northern Bering and Chukchi Seas Abstract -Oxygen isotopic composition of rivers, evaporated surface ocean waters, bottom seawater and tunicate cellulose were used melting glaciers, and melting sea ice can be as short-term and long-term indicators, respec- tively, of water-mass characteristics in the north- separated and water types characterized (e.g. ern Bering and Chukchi Seas. Oxygen isotopic Epstein and Mayeda 1953; Tan and Strain composition of northeastern Bering Sea waters is 1980; Bedard et al. 198 1). In contrast to the influenced by Yukon River inflows of IsO-de- variability in the surface ocean, average 180 : pleted continental water mixing with relatively 180-enriched waters contributed by the Anadyr 160 ratios for the deep (> 500 m) sea vary Current. Tunicate cellulose sampled under Alas- by < 1%~ when expressed in the conven- ka coastal water is more depleted in IsO than that tional 6 notation: collected under Bering shelf and Anadyr waters, which reflects the oxygen isotopic composition 6180 = (Rstd/R,mple- 1) X 1030/oo (1) of these waters. Tunicate cellulose collected un- der the mixed Bering shelf water displays inter- where R = 180 : l 6O and std is Standard Mean mediate 6180 values. Oxygen isotopic analyses of Ocean Water (SMOW). The low variability bottom seawater were used to determine the spa- in V80 values of waters in the deep sea has tial location and influence of continental and led to widespread use of oxygen isotopes as coastal-derived precipitation and of sea-ice for- mation on water-mass structure on the continen- a paleothermometric indicator. -
Temperature and Salinity Sensitivity of the Invasive Ascidian Microcosmus Exasperatus Heller, 1878
Aquatic Invasions (2016) Volume 11, Issue 1: 33–43 DOI: http://dx.doi.org/10.3391/ai.2016.11.1.04 Open Access © 2016 The Author(s). Journal compilation © 2016 REABIC Research Article Temperature and salinity sensitivity of the invasive ascidian Microcosmus exasperatus Heller, 1878 1 1,2 Lilach Raijman Nagar and Noa Shenkar * 1Department of Zoology, George S. Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv, Tel Aviv, 69978, Israel 2The Steinhardt Museum of Natural History and National Research Center, Tel Aviv University, Tel Aviv, Israel *Corresponding author E-mail: [email protected] Received: 5 May 2015 / Accepted: 24 November 2015 / Published online: 30 December 2015 Handling editor: Vadim Panov Abstract Environmental factors, such as temperature and salinity, are known to influence distribution patterns and invasion success in ascidians. The solitary ascidian Microcosmus exasperatus Heller, 1878 has a wide global distribution and can be found in both tropical and sub-tropical waters. In the Mediterranean Sea, it is considered to be an invasive species introduced through the Suez Canal, with a restricted distribution in the eastern Mediterranean. Despite its global distribution, the environmental tolerances of this species are poorly known. We examined the effect of varying temperature and salinity on the survival of adult individuals of M. exasperatus in a laboratory setting to partially determine its environmental tolerance range. In addition, it’s global and local distribution as well as the seasonal abundance in ‘Akko Bay (northern Mediterranean coast of Israel) were examined. Field observations and laboratory experiments show that M. exasperatus is able to tolerate a temperature range of 12–30 ºC, and salinity of 37–45, but it survived poorly in salinity of 33–35 and temperatures > 32 ºC. -
Mitochondrial Genetic Code in Tunicates
bioRxiv preprint doi: https://doi.org/10.1101/865725; this version posted December 5, 2019. The copyright holder has placed this preprint (which was not certified by peer review) in the Public Domain. It is no longer restricted by copyright. Anyone can legally share, reuse, remix, or adapt this material for any purpose without crediting the original authors. Widespread use of the \ascidian" mitochondrial genetic code in tunicates Julien Pichon1,2, Nicholas M. Luscombe1,3,4, Charles Plessy1,* December 5, 2019 1. Okinawa Institute of Science and Technology Graduate University 1919-1 Tancha, Onna-son, Kunigami-gun Okinawa, 904-0495, Japan 2. Uni- versit´ede Paris 3. The Francis Crick Institute, 1 Midland Road, Lon- don, NW1 1AT, UK 4. UCL Genetics Institute, University College Lon- don, Gower Street, London, WC1E 6BT, UK *. Author for correspondence: [email protected] Abstract Background: Ascidians, a tunicate class, use a mitochondrial ge- netic code that is distinct from vertebrates and other invertebrates. Though it has been used to translate the coding sequences from other tunicate species on a case-by-case basis, it is has not been investi- gated whether this can be done systematically. This is an impor- tant because a) some tunicate mitochondrial sequences are currently translated with the invertebrate code by repositories such as NCBI's GenBank, and b) uncertainties about the genetic code to use can com- plicate or introduce errors in phylogenetic studies based on translated mitochondrial protein sequences. Methods: We collected publicly available nucleotide sequences for non-ascidian tunicates including appendicularians such as Oikopleura dioica, translated them using the ascidian mitochondrial code, and built multiple sequence alignments covering all tunicate classes. -
Life-History Strategies of a Native Marine Invertebrate Increasingly Exposed to Urbanisation and Invasion
Temporal Currency: Life-history strategies of a native marine invertebrate increasingly exposed to urbanisation and invasion A thesis submitted in partial fulfilment of the requirements for the degree of Master of Science in Zoology University of Canterbury New Zealand Jason Suwandy 2012 Contents List of Figures ......................................................................................................................................... iii List of Tables .......................................................................................................................................... vi Acknowledgements ............................................................................................................................... vii Abstract ................................................................................................................................................ viii CHAPTER ONE - General Introduction .................................................................................................... 1 1.1 Marine urbanisation and invasion ................................................................................................ 2 1.2 Successful invasion and establishment of populations ................................................................ 4 1.3 Ascidians ....................................................................................................................................... 7 1.4 Native ascidians as study organisms ............................................................................................ -
Oikopleura Dioica: a Plankton Predator That
Flexibility of gene arangement in the genome of Oikopleura dioica Charles Plessy and the Luscombe Laboratory (group authorship). Okinawa Institute of Science and Technology Graduate University (OIST) 1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495 Oikopleura dioica in brief: - Japanese name: オタマボヤ Oikopleura dioica: a plankton predator that: - Oikopleura dioica is a globally distributed marine animal. It is evolutionarily closer to human than are lives in a house has a muscular tail, never sleeps and releases model organisms such as yeast, nematodes or fruit flies. As it belongs to the chordate phylum it has made with cellulose for flowing food to its mouth its gametes in only 5 days features common with vertebrate embryonic development, such as a dorsal nerve cord, or the formation of a muscular tail supported by a notochord. - Ecological importance: O. dioica is a small filter feeder that can account for up to 10 % of the total carbon mass in an area. It eats unicellular plankton and was reported to be able to ingest bacterial viruses and microplastics as well. Being an extremely efficient predator, it has an important role in the carbon chain, by producing organic matter (fecal pellet and "houses") that sediment to the sea floor. - Evolution: as it belongs to the tunicate phylum, it is among the invertebrates that are evolutionary closest to humans. Tunicates, like vertebrates are chordates: they have a muscular tail. They also have a brain, a heart, a gut, etc. - Compact genome: only 70 Mb. Nevertheless, it contains 18,020 predicted genes, which makes it an intersting model to study how to compactly encode functions homologous to some found in vertebrates. -
Tunicate Mitogenomics and Phylogenetics: Peculiarities of the Herdmania Momus Mitochondrial Genome and Support for the New Chordate Phylogeny
Tunicate mitogenomics and phylogenetics: peculiarities of the Herdmania momus mitochondrial genome and support for the new chordate phylogeny. Tiratha Raj Singh, Georgia Tsagkogeorga, Frédéric Delsuc, Samuel Blanquart, Noa Shenkar, Yossi Loya, Emmanuel Douzery, Dorothée Huchon To cite this version: Tiratha Raj Singh, Georgia Tsagkogeorga, Frédéric Delsuc, Samuel Blanquart, Noa Shenkar, et al.. Tu- nicate mitogenomics and phylogenetics: peculiarities of the Herdmania momus mitochondrial genome and support for the new chordate phylogeny.. BMC Genomics, BioMed Central, 2009, 10, pp.534. 10.1186/1471-2164-10-534. halsde-00438100 HAL Id: halsde-00438100 https://hal.archives-ouvertes.fr/halsde-00438100 Submitted on 2 Dec 2009 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. BMC Genomics BioMed Central Research article Open Access Tunicate mitogenomics and phylogenetics: peculiarities of the Herdmania momus mitochondrial genome and support for the new chordate phylogeny Tiratha Raj Singh†1, Georgia Tsagkogeorga†2, Frédéric Delsuc2, Samuel Blanquart3, Noa -
Ascidian News #87 June 2021
ASCIDIAN NEWS* Gretchen Lambert 12001 11th Ave. NW, Seattle, WA 98177 206-365-3734 [email protected] home page: http://depts.washington.edu/ascidian/ Number 87 June 2021 Well, here we are still in this pandemic! I asked how you all are and again received many responses. A number are included in the next two sections. Nearly everyone still expresses confidence at having met the challenges and a great feeling of accomplishment even though tired of the whole thing; congratulations to you all! There are 117 new publications since December! Thanks to so many for the contributions and for letting me know how important AN continues to be. Please keep in touch and continue to send me contributions for the next issue. Keep safe, keep working, and good luck to everyone. *Ascidian News is not part of the scientific literature and should not be cited as such. NEWS AND VIEWS 1. From Hiroki Nishida ([email protected]) : In Japan, we are very slow to be vaccinated, but the labs are ordinarily opened and we can continue working. Number of patients are gradually increasing though and we are waiting for vaccines. I have to stay in my home and the lab. Postponement of 11th ITM (International Tunicate Meeting) This is an announcement about 11th ITM that had been planned to be held in July 2021 in Kobe, Japan. It is postponed by a year because of the global spread of COVID-19. We had an 11th ITM board meeting, and came to the conclusion that we had to reschedule it for July 2022 at the same venue (Konan University, Kobe, Japan) and similar dates (July 11 to 16). -
Ascidian-Associated Polychaetes
See discussions, stats, and author profiles for this publication at: http://www.researchgate.net/publication/267868444 Ascidian-associated polychaetes: ecological implications of aggregation size and tube- building chaetopterids on assemblage structure in the Southeastern Pacific Ocean ARTICLE in MARINE BIODIVERSITY · OCTOBER 2014 Impact Factor: 1.1 · DOI: 10.1007/s12526-014-0283-7 READS 80 5 AUTHORS, INCLUDING: Nicolas Rozbaczylo Christian M. Ibáñez Pontifical Catholic University of Chile Universidad Andrés Bello 63 PUBLICATIONS 373 CITATIONS 42 PUBLICATIONS 298 CITATIONS SEE PROFILE SEE PROFILE Marcelo A. Flores Juan M Cancino Universidad Andrés Bello Catholic University of the Most Holy Conce… 14 PUBLICATIONS 23 CITATIONS 46 PUBLICATIONS 742 CITATIONS SEE PROFILE SEE PROFILE All in-text references underlined in blue are linked to publications on ResearchGate, Available from: Roger D. Sepúlveda letting you access and read them immediately. Retrieved on: 28 December 2015 Mar Biodiv DOI 10.1007/s12526-014-0283-7 ORIGINAL PAPER Ascidian-associated polychaetes: ecological implications of aggregation size and tube-building chaetopterids on assemblage structure in the Southeastern Pacific Ocean Roger D. Sepúlveda & Nicolás Rozbaczylo & Christian M. Ibáñez & Marcelo Flores & Juan M. Cancino Received: 13 May 2014 /Revised: 13 October 2014 /Accepted: 20 October 2014 # Senckenberg Gesellschaft für Naturforschung and Springer-Verlag Berlin Heidelberg 2014 Abstract Epifaunal polychaetes inhabit a range of habitat chaetopterid tubes influenced the -
Australian Natural HISTORY
I AUSTRAliAN NATURAl HISTORY PUBLISHED QUARTERLY BY THE AUSTRALIAN MUSEUM, 6-B COLLEGE STREET, SYDNEY VOLUME 19 NUMBER 7 PRESIDENT, JOE BAKER DIRECTOR, DESMOND GRIFFIN JULY-SEPTEMBER 1976 THE EARLY MYSTERY OF NORFOLK ISLAND 218 BY JIM SPECHT INSIDE THE SOPHISTICATED SEA SQUIRT 224 BY FRANK ROWE SILK, SPINNERETS AND SNARES 228 BY MICHAEL GRAY EXPLORING MACQUARIE ISLAND 236 PART1 : SOUTH ERN W ILDLIFE OUTPOST BY DONALD HORNING COVER: The Rockhopper I PART 2: SUBANTARCTIC REFUGE Penguin, Eudyptes chryso BY JIM LOWRY come chrysocome, a small crested species which reaches 57cm maximum A MICROCOSM OF DIVERSITY 246 adult height. One of the four penguin species which BY JOHN TERRELL breed on Macq uarie Island, they leave for six months every year to spend the IN REVIEW w inter months at sea. SPECTACULAR SHELLS AND OTHER CREATURES 250 (Photo: D.S. Horning.) A nnual Subscription: $6-Australia; $A7.50-other countries except New Zealand . EDITOR Single cop ies: $1 .50 ($1.90 posted Australia); $A2-other countries except New NANCY SMITH Zealand . Cheque or money order payable to The Australian Museum should be sen t ASSISTANT EDITORS to The Secretary, The Australian Museum, PO Box A285, Sydney South 2000. DENISE TORV , Overseas subscribers please note that monies must be paid in Australian currency. INGARET OETTLE DESIGN I PRODUCTION New Zealand Annual Subscription: $NZ8. Cheque or money order payable to the LEAH RYAN Government Printer should be sent to the New Zealand Government Printer, ASSISTANT Private Bag, Wellington. BRONWYN SHIRLEY CIRCULATION Opinions expressed by the authors are their own and do not necessarily represent BRUCE GRAINGER the policies or v iews of The Australian Museum. -
1 Phylogeny of the Families Pyuridae and Styelidae (Stolidobranchiata
* Manuscript 1 Phylogeny of the families Pyuridae and Styelidae (Stolidobranchiata, Ascidiacea) 2 inferred from mitochondrial and nuclear DNA sequences 3 4 Pérez-Portela Ra, b, Bishop JDDb, Davis ARc, Turon Xd 5 6 a Eco-Ethology Research Unit, Instituto Superior de Psicologia Aplicada (ISPA), Rua 7 Jardim do Tabaco, 34, 1149-041 Lisboa, Portugal 8 9 b Marine Biological Association of United Kingdom, The Laboratory Citadel Hill, PL1 10 2PB, Plymouth, UK, and School of Biological Sciences, University of Plymouth PL4 11 8AA, Plymouth, UK 12 13 c School of Biological Sciences, University of Wollongong, Wollongong NSW 2522 14 Australia 15 16 d Centre d’Estudis Avançats de Blanes (CSIC), Accés a la Cala St. Francesc 14, Blanes, 17 Girona, E-17300, Spain 18 19 Email addresses: 20 Bishop JDD: [email protected] 21 Davis AR: [email protected] 22 Turon X: [email protected] 23 24 Corresponding author: 25 Rocío Pérez-Portela 26 Eco-Ethology Research Unit, Instituto Superior de Psicologia Aplicada (ISPA), Rua 27 Jardim do Tabaco, 34, 1149-041 Lisboa, Portugal 28 Phone: + 351 21 8811226 29 Fax: + 351 21 8860954 30 [email protected] 31 1 32 Abstract 33 34 The Order Stolidobranchiata comprises the families Pyuridae, Styelidae and Molgulidae. 35 Early molecular data was consistent with monophyly of the Stolidobranchiata and also 36 the Molgulidae. Internal phylogeny and relationships between Styelidae and Pyuridae 37 were inconclusive however. In order to clarify these points we used mitochondrial and 38 nuclear sequences from 31 species of Styelidae and 25 of Pyuridae. Phylogenetic trees 39 recovered the Pyuridae as a monophyletic clade, and their genera appeared as 40 monophyletic with the exception of Pyura. -
Can Novel Genetic Analyses Help to Identify Lowdispersal Marine
Can novel genetic analyses help to identify low-dispersal marine invasive species? Peter R. Teske1,2, Jonathan Sandoval-Castillo1, Jonathan M. Waters3 & Luciano B. Beheregaray1 1Molecular Ecology Laboratory, School of Biological Sciences, Flinders University, Adelaide, South Australia 5001, Australia 2Department of Zoology, University of Johannesburg, Auckland Park, 2006, Johannesburg, South Africa 3Department of Zoology, University of Otago, PO Box 56, Dunedin, New Zealand Keywords Abstract Ascidian, biological invasion, coalescent theory, founder effect, genetic bottleneck, Genetic methods can be a powerful tool to resolve the native versus introduced microsatellites, sea squirt. status of populations whose taxonomy and biogeography are poorly understood. The genetic study of introduced species is presently dominated by analyses that Correspondence identify signatures of recent colonization by means of summary statistics. Unfor- Luciano B. Beheregaray tunately, such approaches cannot be used in low-dispersal species, in which Molecular Ecology Laboratory, School of recently established populations originating from elsewhere in the species’ native Biological Sciences, Flinders University, range also experience periods of low population size because they are founded by Adelaide, SA 5001, Australia. Tel: +61 8 8201 5243; Fax: +61 8 8201 3015; few individuals. We tested whether coalescent-based molecular analyses that pro- E-mail: Luciano.beheregaray@flinders.edu.au vide detailed information about demographic history supported the hypothesis that a sea squirt whose distribution is centered on Tasmania was recently intro- Funding Information duced to mainland Australia and New Zealand through human activities. Meth- This study was funded by the Australian ods comparing trends in population size (Bayesian Skyline Plots and Research Council (DP110101275 to Approximate Bayesian Computation) were no more informative than summary Beheregaray, Moller€ & Waters).