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Role of Amylase in Ovarian Cancer Mai Mohamed University of South Florida, [email protected]
University of South Florida Scholar Commons Graduate Theses and Dissertations Graduate School July 2017 Role of Amylase in Ovarian Cancer Mai Mohamed University of South Florida, [email protected] Follow this and additional works at: http://scholarcommons.usf.edu/etd Part of the Pathology Commons Scholar Commons Citation Mohamed, Mai, "Role of Amylase in Ovarian Cancer" (2017). Graduate Theses and Dissertations. http://scholarcommons.usf.edu/etd/6907 This Dissertation is brought to you for free and open access by the Graduate School at Scholar Commons. It has been accepted for inclusion in Graduate Theses and Dissertations by an authorized administrator of Scholar Commons. For more information, please contact [email protected]. Role of Amylase in Ovarian Cancer by Mai Mohamed A dissertation submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy Department of Pathology and Cell Biology Morsani College of Medicine University of South Florida Major Professor: Patricia Kruk, Ph.D. Paula C. Bickford, Ph.D. Meera Nanjundan, Ph.D. Marzenna Wiranowska, Ph.D. Lauri Wright, Ph.D. Date of Approval: June 29, 2017 Keywords: ovarian cancer, amylase, computational analyses, glycocalyx, cellular invasion Copyright © 2017, Mai Mohamed Dedication This dissertation is dedicated to my parents, Ahmed and Fatma, who have always stressed the importance of education, and, throughout my education, have been my strongest source of encouragement and support. They always believed in me and I am eternally grateful to them. I would also like to thank my brothers, Mohamed and Hussien, and my sister, Mariam. I would also like to thank my husband, Ahmed. -
The Roles of Lipids in Intercellular Adhesion and Cell Movement
The Roles of Lipids in Intercellular Adhesion and Cell Movement Guang Yang This thesis is submitted to University College London for the Degree of Doctor of Philosophy Supervised by Prof. Ulrike Eggert Prof. Guillaume Charras Dr Victoria Sanz-Moreno Department of Cell and Developmental Biology University College London February 2018 Declaration I, Guang Yang, confirm that the work presented in this thesis is my own. Where information has been derived from other sources, I confirm that this has been indicated in the thesis. 2 Abstract Cells actively regulate their lipid composition and localisation during cell division, with both signalling roles and structural roles likely. In this study, I investigate the specific roles of lipids in the formation and maintenance of cell-cell junctions, and in cell migration. Although massive membrane rearrangements occur during both processes and lipids are fundamental building blocks of cell membranes, the roles of lipids remain unclear. After perturbing lipid metabolism enzymes with an siRNA library targeting 260 lipid biosynthetic enzymes in HaCaT (immortalized human keratinocytes), junctions were visualised using the adherens junction (AJ) marker α-catenin, and the resultant junction morphologies were examined. The primary screen revealed a potential role for 16 enzymes with two distinct junctional phenotypes: intercellular gaps and abnormal junction morphology. A secondary migration screen based on wound healing assays was conducted with a subgroup of these hits. I found that depletion of some enzymes results in defects in migration speed and cohesiveness, which suggests potential important roles for those enzymes and the lipids they make in cell migration. AGPAT2 (1-Acylglycerol-3-Phosphate O-Acyltransferase 2) is one of the hits being prioritised for further experiments to understand the role of related lipids. -
Bioinformatics Analysis Revealed Novel 3 UTR Variants Associated with Intellectual Disability
G C A T T A C G G C A T genes Article 0 Bioinformatics Analysis Revealed Novel 3 UTR Variants Associated with Intellectual Disability Junmeng Yang 1, Anna Liu 2, Isabella He 3 and Yongsheng Bai 4,5,* 1 Shanghai Starriver Bilingual School, Shanghai 201100, China; [email protected] 2 Appleby College, Oakville, ON L6L3V7, Canada; [email protected] 3 Pittsford Mendon High School, 472 Mendon Road, Pittsford, NY 14534, USA; [email protected] 4 Department of Biology, Eastern Michigan University, 441 Mark Jefferson Hall, Ypsilanti, MI 48197, USA 5 Next-Gen Intelligent Science Training, Ann Arbor, MI 48105, USA * Correspondence: [email protected] Received: 14 July 2020; Accepted: 24 August 2020; Published: 26 August 2020 Abstract: MicroRNAs (or miRNAs) are short nucleotide sequences (~17–22 bp long) that play important roles in gene regulation through targeting genes in the 30untranslated regions (UTRs). Variants located in genomic regions might have different biological consequences in changing gene expression. Exonic variants (e.g., coding variant and 30UTR variant) are often causative of diseases due to their influence on gene product. Variants harbored in the 30UTR region where miRNAs perform their targeting function could potentially alter the binding relationships for target pairs, which could relate to disease causation. We gathered miRNA–mRNA targeting pairs from published studies and then employed the database of microRNA Target Site single nucleotide variants (SNVs) (dbMTS) to discover novel SNVs within the selected pairs. We identified a total of 183 SNVs for the 114 pairs of accurate miRNA–mRNA targeting pairs selected. Detailed bioinformatics analysis of the three genes with identified variants that were exclusively located in the 30UTR section indicated their association with intellectual disability (ID). -
Expression Génique Au Cours De La Différenciation De L'épiderme Humain
UNIVERSITÉ TOULOUSE III - PAUL SABATIER U.F.R. Sciences de la Vie et de la Terre (SVT) École Doctorale Biologie-Santé-Biotechnologies THÈSE Pour l’obtention du grade de DOCTEUR DE L’UNIVERSITÉ TOULOUSE III Spécialité Biologie Cellulaire et Moléculaire Présentée et soutenue par Eve TOULZA le 20 octobre 2006 EXPRESSION GÉNIQUE AU COURS DE LA DIFFÉRENCIATION DE L’ÉPIDERME HUMAIN Jury : David CRIBBS Président Thierry MAGNALDO Rapporteur Philippe MUSETTE Rapporteur Daniel ABERDAM Examinateur Guy SERRE Examinateur Marina GUERRIN WEBER Directeur de thèse Unité Différenciation Épidermique et Auto-immunité Rhumatoïde UMR 5165 CNRS – Université Toulouse III, Faculté de Médecine 37, allées J. Guesde - 31073 Toulouse 1 Cette thèse, pour vous qui me lisez, c’est 282 pages, 41 illustrations, 64 762 mots, 431 168 caractères et 385 références. Mais pour moi ce fût aussi : – 152 minibanques – plus de 100 000 clones – 22 585 ORESTES – 27 000 séquences – 54 plaques de 384 puits – 1200 unités de Taq – 1 demi-milliard de cellules – 288 heures d’enseignement – 23 litres de LB – 18 flacons de trypsine – 760 microgrammes d’ARN – 550 litres de café – 468 000 marches d’escalier – 1 225 grammes d’agarose – 2,66 m² de bureau – 322 amorces de PCR quantitative – 80 gigaoctets de fichiers – 130 kilogrammes de documents – 4 ans de bons moments... 3 Remerciements J’exprime toute ma gratitude à Guy Serre pour m’avoir accueillie dans son unité. Merci de m’avoir permis de travailler dans les meilleures conditions, de m’avoir encouragée et de m’avoir fait confiance quand j’ai souhaité faire de l’enseignement.