C. Radhakrishna Rao: a Century in Statistical Science
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Haplotype and Linkage Disequilibrium Architecture for Human Cancer-Associated Genes
Downloaded from genome.cshlp.org on October 1, 2021 - Published by Cold Spring Harbor Laboratory Press Letter Haplotype and Linkage Disequilibrium Architecture for Human Cancer-Associated Genes Penelope E. Bonnen,1 Peggy J. Wang,1 Marek Kimmel,2 Ranajit Chakraborty,3 and David L. Nelson1,4 1Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas 77030, USA; 2Department of Statistics, Rice University, Houston, Texas 77030, USA; 3Center for Genome Information, Department of Environmental Health, University of Cincinnati, Cincinnati, Ohio 45267, USA To facilitate association-based linkage studies we have studied the linkage disequilibrium (LD) and haplotype architecture around five genes of interest for cancer risk: ATM, BRCA1, BRCA2, RAD51, and TP53. Single nucleotide polymorphisms (SNPs) were identified and used to construct haplotypes that span 93–200 kb per locus with an average SNP density of 12 kb. These markers were genotyped in four ethnically defined populations that contained 48 each of African Americans, Asian Americans, Hispanic Americans, and European Americans. Haplotypes were inferred using an expectation maximization (EM) algorithm, and the data were analyzed using DЈ, R2, Fisher’s exact P-values, and the four-gamete test for recombination. LD levels varied widely between loci from continuously high LD across 200 kb to a virtual absence of LD across a similar length of genome. LD structure also varied at each gene and between populations studied. This variation indicates that the success of linkage-based studies will require a precise description of LD at each locus and in each population to be studied. One striking consistency between genes was that at each locus a modest number of haplotypes present in each population accounted for a high fraction of the total number of chromosomes. -
Economic Development Internationalist of the Week
PAD6836 Lecture 8 University of North Florida Master of Public Administration program PAD 6836 Comparative public administration Economic development Internationalist of the week photo credit Manmohan Singh * Among other things, in our discussions of corruption we’ve noted that there is a difficult cycle to break out of in terms of governance: poor countries cannot afford to pay salaries that attract competent people into public service, and as a result of the corruption and inefficiency that results, citizens have little inclination to pay the taxes needed to attract and keep good people in public administration. George’s more or less random thoughts on development Progress! The general idea of economic development is to increase the productivity of society so that it produces more goods and services. Everyone wants it. Especially among left-wing critics, development (even ‘progress’) is often criticized as being materialistic, and/or a Western pathology acting as a siren’s song to lure traditional societies out of their Ruritanian idyls (I’m not sure if ‘idyl’ works with Ruritanian, but it sounds good – click for a discussion of Ruritania). This is probably not the case, for at least two reasons: 1. There isn’t much evidence to support this, among actually existing human societies (an exception). 2. Critics seem unable to understand that at lower levels of development, ‘more stuff’ means housing that protects one from the elements and vermin, health care, more efficient tools, etc. Preconditions. Causes of economic growth (drawing from Parkin 2005, with many modifications) Free markets – understood as relatively free, given what is possible in an imperfect world. -
Report on Statistical Disclosure Limitation Methodology
STATISTICAL POLICY WORKING PAPER 22 (Second version, 2005) Report on Statistical Disclosure Limitation Methodology Federal Committee on Statistical Methodology Originally Prepared by Subcommittee on Disclosure Limitation Methodology 1994 Revised by Confidentiality and Data Access Committee 2005 Statistical and Science Policy Office of Information and Regulatory Affairs Office of Management and Budget December 2005 The Federal Committee on Statistical Methodology (December 2005) Members Brian A. Harris-Kojetin, Chair, Office of William Iwig, National Agricultural Management and Budget Statistics Service Wendy L. Alvey, Secretary, U.S. Census Arthur Kennickell, Federal Reserve Board Bureau Nancy J. Kirkendall, Energy Information Lynda Carlson, National Science Administration Foundation Susan Schechter, Office of Management and Steven B. Cohen, Agency for Healthcare Budget Research and Quality Rolf R. Schmitt, Federal Highway Steve H. Cohen, Bureau of Labor Statistics Administration Lawrence H. Cox, National Center for Marilyn Seastrom, National Center for Health Statistics Education Statistics Robert E. Fay, U.S. Census Bureau Monroe G. Sirken, National Center for Health Statistics Ronald Fecso, National Science Foundation Nancy L. Spruill, Department of Defense Dennis Fixler, Bureau of Economic Analysis Clyde Tucker, Bureau of Labor Statistics Gerald Gates, U.S. Census Bureau Alan R. Tupek, U.S. Census Bureau Barry Graubard, National Cancer Institute G. David Williamson, Centers for Disease Control and Prevention Expert Consultant Robert Groves, University of Michigan and Joint Program in Survey Methodology Preface The Federal Committee on Statistical Methodology (FCSM) was organized by the Office of Management and Budget (OMB) in 1975 to investigate issues of data quality affecting Federal statistics. Members of the committee, selected by OMB on the basis of their individual expertise and interest in statistical methods, serve in a personal capacity rather than as agency representatives. -
Bloomsbury Scientists Ii Iii
i Bloomsbury Scientists ii iii Bloomsbury Scientists Science and Art in the Wake of Darwin Michael Boulter iv First published in 2017 by UCL Press University College London Gower Street London WC1E 6BT Available to download free: www.ucl.ac.uk/ ucl- press Text © Michael Boulter, 2017 Images courtesy of Michael Boulter, 2017 A CIP catalogue record for this book is available from the British Library. This book is published under a Creative Commons Attribution Non-commercial Non-derivative 4.0 International license (CC BY-NC-ND 4.0). This license allows you to share, copy, distribute and transmit the work for personal and non-commercial use providing author and publisher attribution is clearly stated. Attribution should include the following information: Michael Boulter, Bloomsbury Scientists. London, UCL Press, 2017. https://doi.org/10.14324/111.9781787350045 Further details about Creative Commons licenses are available at http://creativecommons.org/licenses/ ISBN: 978- 1- 78735- 006- 9 (hbk) ISBN: 978- 1- 78735- 005- 2 (pbk) ISBN: 978- 1- 78735- 004- 5 (PDF) ISBN: 978- 1- 78735- 007- 6 (epub) ISBN: 978- 1- 78735- 008- 3 (mobi) ISBN: 978- 1- 78735- 009- 0 (html) DOI: https:// doi.org/ 10.14324/ 111.9781787350045 v In memory of W. G. Chaloner FRS, 1928– 2016, lecturer in palaeobotany at UCL, 1956– 72 vi vii Acknowledgements My old writing style was strongly controlled by the measured precision of my scientific discipline, evolutionary biology. It was a habit that I tried to break while working on this project, with its speculations and opinions, let alone dubious data. But my old practices of scientific rigour intentionally stopped personalities and feeling showing through. -
Accidental Prime Minister
THE ACCIDENTAL PRIME MINISTER THE ACCIDENTAL PRIME MINISTER THE MAKING AND UNMAKING OF MANMOHAN SINGH SANJAYA BARU VIKING Published by the Penguin Group Penguin Books India Pvt. Ltd, 11 Community Centre, Panchsheel Park, New Delhi 110 017, India Penguin Group (USA) Inc., 375 Hudson Street, New York, New York 10014, USA Penguin Group (Canada), 90 Eglinton Avenue East, Suite 700, Toronto, Ontario, M4P 2Y3, Canada (a division of Pearson Penguin Canada Inc.) Penguin Books Ltd, 80 Strand, London WC2R 0RL, England Penguin Ireland, 25 St Stephen’s Green, Dublin 2, Ireland (a division of Penguin Books Ltd) Penguin Group (Australia), 707 Collins Street, Melbourne, Victoria 3008, Australia (a division of Pearson Australia Group Pty Ltd) Penguin Group (NZ), 67 Apollo Drive, Rosedale, Auckland 0632, New Zealand (a division of Pearson New Zealand Ltd) Penguin Group (South Africa) (Pty) Ltd, Block D, Rosebank Offi ce Park, 181 Jan Smuts Avenue, Parktown North, Johannesburg 2193, South Africa Penguin Books Ltd, Registered Offi ces: 80 Strand, London WC2R 0RL, England First published in Viking by Penguin Books India 2014 Copyright © Sanjaya Baru 2014 All rights reserved 10 9 8 7 6 5 4 3 2 1 The views and opinions expressed in this book are the author’s own and the facts are as reported by him which have been verifi ed to the extent possible, and the publishers are not in any way liable for the same. ISBN 9780670086740 Typeset in Bembo by R. Ajith Kumar, New Delhi Printed at Thomson Press India Ltd, New Delhi This book is sold subject to the condition that -
Some Historical Notes on Ecological Sensibilities in Modern Western Culture
Some Historical Notes on Ecological Sensibilities in Modern Western Culture A revised version of a lecture given in the School of Economics of the University of Hyderabad in 2014 by Mark Lindley In Western culture since ca.1800, ecological sensibilities, though hardly dominant, have cropped up now and then in one way and another. This essay will include succinct descriptions of some examples illus- trating various points of concern (highlighted in bold-face font). • In 1798, Thomas Malthus, a top English economist of the generation after Adam Smith, had said that “The power [i.e. rate] of [human] population [increase] is so superior to the power of the earth to produce subsistence for man, that premature death must in some shape or other visit the human race.” He said it would happen by means of “war, pestilence, [and] famine”. (The number of humans at that time was about one thousand million.) • In 1804, William Blake published a powerful poem (though only 16 lines long) contrasting (a) the working conditions in the English cotton mills and the air pollution which their coal-burning steam engines were causing, with (b) a utopian concept of a green “new Jerusalem” in England where, he imagined, Jesus had supposedly once visited. Some lines from the poem are: “And did the Countenance Divine / Shine forth upon our clouded hills? / And was Jerusalem buildèd here / Among these dark Satanic mills?”. (A musical setting of this poem is beloved today in England. Many Brits want it to be the national anthem.) • In 1797, a French hydraulic engineer, Jean Antoine Fabre, published a book explaining (among other things) how streams flowing fast on micro-watersheds become torrents ravaging fertile valley floors. -
New Documents on Mongolia and the Cold War
Cold War International History Project Bulletin, Issue 16 New Documents on Mongolia and the Cold War Translation and Introduction by Sergey Radchenko1 n a freezing November afternoon in Ulaanbaatar China and Russia fell under the Mongolian sword. However, (Ulan Bator), I climbed the Zaisan hill on the south- after being conquered in the 17th century by the Manchus, Oern end of town to survey the bleak landscape below. the land of the Mongols was divided into two parts—called Black smoke from gers—Mongolian felt houses—blanketed “Outer” and “Inner” Mongolia—and reduced to provincial sta- the valley; very little could be discerned beyond the frozen tus. The inhabitants of Outer Mongolia enjoyed much greater Tuul River. Chilling wind reminded me of the cold, harsh autonomy than their compatriots across the border, and after winter ahead. I thought I should have stayed at home after all the collapse of the Qing dynasty, Outer Mongolia asserted its because my pen froze solid, and I could not scribble a thing right to nationhood. Weak and disorganized, the Mongolian on the documents I carried up with me. These were records religious leadership appealed for help from foreign countries, of Mongolia’s perilous moves on the chessboard of giants: including the United States. But the first foreign troops to its strategy of survival between China and the Soviet Union, appear were Russian soldiers under the command of the noto- and its still poorly understood role in Asia’s Cold War. These riously cruel Baron Ungern who rode past the Zaisan hill in the documents were collected from archival depositories and pri- winter of 1921. -
JEROME P. REITER Department of Statistical Science, Duke University Box 90251, Durham, NC 27708 Phone: 919 668 5227
JEROME P. REITER Department of Statistical Science, Duke University Box 90251, Durham, NC 27708 phone: 919 668 5227. email: [email protected]. September 26, 2021 EDUCATION Ph.D. in Statistics, Harvard University, 1999. A.M. in Statistics, Harvard University, 1996. B.S. in Mathematics, Duke University, 1992. DISSERTATION \Estimation in the Presence of Constraints that Prohibit Explicit Data Pooling." Advisor: Donald B. Rubin. POSITIONS Academic Appointments Professor of Statistical Science and Bass Fellow, Duke University, 2015 - present. Mrs. Alexander Hehmeyer Professor of Statistical Science, Duke University, 2013 - 2015. Mrs. Alexander Hehmeyer Associate Professor of Statistical Science, Duke University, 2010 - 2013. Associate Professor of Statistical Science, Duke University, 2009 - 2010. Assistant Professor of Statistical Science, Duke University, 2006 - 2008. Assistant Professor of the Practice of Statistics and Decision Sciences, Duke University, 2002 - 2006. Lecturer in Statistics, University of California at Santa Barbara, 2001 - 2002. Assistant Professor of Statistics, Williams College, 1999 - 2001. Other Appointments Chair, Department of Statistical Science, Duke University, 2019 - present. Associate Chair, Department of Statistical Science, Duke University, 2016 - 2019. Mathematical Statistician (part-time), U. S. Bureau of the Census, 2015 - present. Associate/Deputy Director of Information Initiative at Duke, Duke University, 2013 - 2019. Social Sciences Research Institute Data Services Core Director, Duke University, 2010 - 2013. Interim Director, Triangle Research Data Center, 2006. Senior Fellow, National Institute of Statistical Sciences, 2002 - 2005. 1 ACADEMIC HONORS Keynote talk, 11th Official Statistics and Methodology Symposium (Statistics Korea), 2021. Fellow of the Institute of Mathematical Statistics, 2020. Clifford C. Clogg Memorial Lecture, Pennsylvania State University, 2020 (postponed due to covid-19). -
Post-Autistic Economics Review Issue No
sanity, humanity and science post-autistic economics review Issue no. 41, 5 March 2007 back issues at www.paecon.net Subscribers: 9,461 from over 150 countries Subscriptions are free. To subscribe, email "subscribe". To unsubscribe, email "unsubscribe". Send to : [email protected] In this issue: - What would post-autistic trade policy be? Alan Goodacre (University of Stirling, UK) ........................................................................................ 2 - On the need for a heterodox health economics Robert McMaster (University of Aberdeen, UK) ........................................................................... 9 - True cost environmental accounting for a post-autistic economy David A. Bainbridge (Alliant International University, USA) ..................................................... 23 - Does John Kenneth Galbraith have a legacy? Richard Parker (Harvard University, USA) .................................................................................. 29 - Labour rights in China Tim Costello, Brendan Smith and Jeremy Brecher (USA) ............................... 34 - Endogenous growth theory: the most recent “revolution” in economics Peter T. Manicas (University of Hawaii, USA) ............................................................................ 39 - Submissions, etc. ............................................................................................................................... 54 1 post-autistic economics review, issue no. 41 What would post-autistic trade policy be? Alan Goodacre -
The American Statistician
This article was downloaded by: [T&F Internal Users], [Rob Calver] On: 01 September 2015, At: 02:24 Publisher: Taylor & Francis Informa Ltd Registered in England and Wales Registered Number: 1072954 Registered office: 5 Howick Place, London, SW1P 1WG The American Statistician Publication details, including instructions for authors and subscription information: http://www.tandfonline.com/loi/utas20 Reviews of Books and Teaching Materials Published online: 27 Aug 2015. Click for updates To cite this article: (2015) Reviews of Books and Teaching Materials, The American Statistician, 69:3, 244-252, DOI: 10.1080/00031305.2015.1068616 To link to this article: http://dx.doi.org/10.1080/00031305.2015.1068616 PLEASE SCROLL DOWN FOR ARTICLE Taylor & Francis makes every effort to ensure the accuracy of all the information (the “Content”) contained in the publications on our platform. However, Taylor & Francis, our agents, and our licensors make no representations or warranties whatsoever as to the accuracy, completeness, or suitability for any purpose of the Content. Any opinions and views expressed in this publication are the opinions and views of the authors, and are not the views of or endorsed by Taylor & Francis. The accuracy of the Content should not be relied upon and should be independently verified with primary sources of information. Taylor and Francis shall not be liable for any losses, actions, claims, proceedings, demands, costs, expenses, damages, and other liabilities whatsoever or howsoever caused arising directly or indirectly in connection with, in relation to or arising out of the use of the Content. This article may be used for research, teaching, and private study purposes. -
2017 Magdalen College Record
Magdalen College Record Magdalen College Record 2017 2017 Conference Facilities at Magdalen¢ We are delighted that many members come back to Magdalen for their wedding (exclusive to members), celebration dinner or to hold a conference. We play host to associations and organizations as well as commercial conferences, whilst also accommodating summer schools. The Grove Auditorium seats 160 and has full (HD) projection fa- cilities, and events are supported by our audio-visual technician. We also cater for a similar number in Hall for meals and special banquets. The New Room is available throughout the year for private dining for The cover photograph a minimum of 20, and maximum of 44. was taken by Marcin Sliwa Catherine Hughes or Penny Johnson would be pleased to discuss your requirements, available dates and charges. Please contact the Conference and Accommodation Office at [email protected] Further information is also available at www.magd.ox.ac.uk/conferences For general enquiries on Alumni Events, please contact the Devel- opment Office at [email protected] Magdalen College Record 2017 he Magdalen College Record is published annually, and is circu- Tlated to all members of the College, past and present. If your contact details have changed, please let us know either by writ- ing to the Development Office, Magdalen College, Oxford, OX1 4AU, or by emailing [email protected] General correspondence concerning the Record should be sent to the Editor, Magdalen College Record, Magdalen College, Ox- ford, OX1 4AU, or, preferably, by email to [email protected]. -
Biometrical Applications in Biological Sciences-A Review on the Agony for Their Practical Efficiency- Problems and Perspectives
Biometrics & Biostatistics International Journal Review Article Open Access Biometrical applications in biological sciences-A review on the agony for their practical efficiency- Problems and perspectives Abstract Volume 7 Issue 5 - 2018 The effect of the three biological sciences- agriculture, environment and medicine S Tzortzios in the people’s life is of the greatest importance. The chain of the influence of the University of Thessaly, Greece environment to the form and quality of the agricultural production and the effect of both of them to the people’s health and welfare consists in an integrated system Correspondence: S Tzortzios, University of Thessaly, Greece, that is the basic substance of the human life. Agriculture has a great importance in Email [email protected] the World’s economy; however, the available resources for research and technology development are limited. Moreover, the environmental and productive conditions are Received: August 12, 2018 | Published: October 05, 2018 very different from one country to another, restricting the generalized transferring of technology. The statistical methods should play a paramount role to insure both the objectivity of the results of agricultural research as well as the optimum usage of the limited resources. An inadequate or improper use of statistical methods may result in wrong conclusions and in misuse of the available resources with important scientific and economic consequences. Many times, Statistics is used as a basis to justify conclusions of research work without considering in advance the suitability of the statistical methods to be used. The obvious question is: What importance do biological researchers give to the statistical methods? The answer is out of any doubt and the fact that most of the results published in specialized journals includes statistical considerations, confirms its importance.