Global Biodiversity and Phylogenetic Evaluation of Remipedia (Crustacea)
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Lozano-Fernandez Et Al
Citation for published version: Lozano-Fernandez, J, Giacomelli, M, Fleming, JF, Chen, A, Vinther, J, Thomsen, PF, Glenner, H, Palero, F, Legg, DA, Iliffe, TM, Pisani, D & Olesen, J 2019, 'Pancrustacean Evolution Illuminated by Taxon-Rich Genomic- Scale Data Sets with an Expanded Remipede Sampling', Genome biology and evolution, vol. 11, no. 8, pp. 2055-2070. https://doi.org/10.1093/gbe/evz097 DOI: 10.1093/gbe/evz097 Publication date: 2019 Link to publication University of Bath Alternative formats If you require this document in an alternative format, please contact: [email protected] General rights Copyright and moral rights for the publications made accessible in the public portal are retained by the authors and/or other copyright owners and it is a condition of accessing publications that users recognise and abide by the legal requirements associated with these rights. Take down policy If you believe that this document breaches copyright please contact us providing details, and we will remove access to the work immediately and investigate your claim. Download date: 05. Oct. 2021 GBE Pancrustacean Evolution Illuminated by Taxon-Rich Genomic- Scale Data Sets with an Expanded Remipede Sampling 1,2,9,* 1 2,10 2,11 1,2 Jesus Lozano-Fernandez , Mattia Giacomelli , James F. Fleming ,AlbertChen , Jakob Vinther , Philip Downloaded from https://academic.oup.com/gbe/article-abstract/11/8/2055/5528088 by University of Cambridge user on 30 September 2019 Francis Thomsen3,12, Henrik Glenner4, Ferran Palero5,6,DavidA.Legg7,ThomasM.Iliffe8, Davide -
Decapod Crustacean Grooming: Functional Morphology, Adaptive Value, and Phylogenetic Significance
Decapod crustacean grooming: Functional morphology, adaptive value, and phylogenetic significance N RAYMOND T.BAUER Center for Crustacean Research, University of Southwestern Louisiana, USA ABSTRACT Grooming behavior is well developed in many decapod crustaceans. Antennular grooming by the third maxillipedes is found throughout the Decapoda. Gill cleaning mechanisms are qaite variable: chelipede brushes, setiferous epipods, epipod-setobranch systems. However, microstructure of gill cleaning setae, which are equipped with digitate scale setules, is quite conservative. General body grooming, performed by serrate setal brushes on chelipedes and/or posterior pereiopods, is best developed in decapods at a natant grade of body morphology. Brachyuran crabs exhibit less body grooming and virtually no specialized body grooming structures. It is hypothesized that the fouling pressures for body grooming are more severe in natant than in replant decapods. Epizoic fouling, particularly microbial fouling, and sediment fouling have been shown r I m ans of amputation experiments to produce severe effects on olfactory hairs, gills, and i.icubated embryos within short lime periods. Grooming has been strongly suggested as an important factor in the coevolution of a rhizocephalan parasite and its anomuran host. The behavioral organization of grooming is poorly studied; the nature of stimuli promoting grooming is not understood. Grooming characters may contribute to an understanding of certain aspects of decapod phylogeny. The occurrence of specialized antennal grooming brushes in the Stenopodidea, Caridea, and Dendrobranchiata is probably not due to convergence; alternative hypotheses are proposed to explain the distribution of this grooming character. Gill cleaning and general body grooming characters support a thalassinidean origin of the Anomura; the hypothesis of brachyuran monophyly is supported by the conservative and unique gill-cleaning method of the group. -
Zootaxa, Bogidiellidae
Zootaxa 2260: 279–284 (2009) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2009 · Magnolia Press ISSN 1175-5334 (online edition) Bogidiellidae* CHARLES OLIVER COLEMAN Humboldt-University, Museum für Naturkunde Berlin, Abteilung Sammlungen, D-10099 Berlin, Germany. ([email protected]) * In: Lowry, J.K. & Myers, A.A. (Eds) (2009) Benthic Amphipoda (Crustacea: Peracarida) of the Great Barrier Reef, Australia. Zootaxa, 2260, 1–930. Abstract The new amphipod species Xystriogidiella juliani from the Great Barrier Reef is described. Characteristics for this species are the 2-articulate accessory flagellum, a short second article of the maxilla 1 palp, the lack of inner rami on the pleopods and a short, emarginate telson. A short description of Xystriogidiella capricornea, a second species occurring in the Great Barrier Reef, is given additionally. Key words: Crustacea, Amphipoda, Bogidiellidae, Great Barrier Reef, Australia, taxonomy, new species, Xystriogidiella capricornea, Xystriogidiella juliani Introduction Most bogidiellid species live in inland ground-waters but a few species occur in marine interstitial habitats. Stock (1984) described the first Bogidiellidae from the Pacific, a new species from the Great Barrier Reef, Bogidiella (Xystriogidiella) capricornea, collected close to Heron Island. Koenemann & Holsinger (1991) raised all bogidiellid subgenera to generic level status. This was followed herein. We collected another new Xystriogidiella species on Lizard Island and described it herein. Materials and methods The descriptions were generated from a DELTA database (Dallwitz 2005). A set of colour plates, a list of standard abbreviations and detailed station data is available in Lowry & Myers (2009). Illustrations were made using the methods described in Coleman (2003, 2006). -
Spelaeogammarus Titan, a New Troglobitic Amphipod from Brazil (Amphipoda: Bogidielloidea: Artesiidae)
Zootaxa 3887 (1): 055–067 ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2014 Magnolia Press ISSN 1175-5334 (online edition) http://dx.doi.org/10.11646/zootaxa.3887.1.3 http://zoobank.org/urn:lsid:zoobank.org:pub:F4BB8139-3A94-4E5E-8C0C-5974BB4E6C84 Spelaeogammarus titan, a new troglobitic amphipod from Brazil (Amphipoda: Bogidielloidea: Artesiidae) ANDRÉ R. SENNA1, LUIZ F. ANDRADE2, LUCAS P. CASTELO-BRANCO3 & RODRIGO L. FERREIRA4 1Universidade Federal da Bahia (UFBA), Instituto de Biologia, Laboratório de Invertebrados Marinhos, Crustacea, Cnidaria & Fauna Associada (LABIMAR). Rua Barão de Jeremoabo, 147, Ondina, Salvador, BA, CEP 40170-290, Brasil. E-mail: [email protected] 2Universidade Federal Rural do Rio de Janeiro, Programa de Pós-graduação em Biologia Animal. Decanato de Pesquisa e Pós- Graduação, UFRRJ, Rod. BR 465, Km 7, Seropédica, RJ, CEP 23890-000, Brasil. E-mail: [email protected] 3Centro Universitário de Volta Redonda (UniFOA), Curso de Ciências Biológicas. Av. Paulo Erlei Alves Abrantes, 1.325, Prédio 1, Três Poços, Volta Redonda, RJ, CEP 27240-560, Brasil. E-mail: [email protected] 4Universidade Federal de Lavras (UFLA), Centro de Estudos em Biologia Subterrânea, Departamento de Biologia. Lavras, MG, Bra- sil. E-mail: [email protected] Abstract A new troglobitic species of the amphipod family Artesiidae Holsinger, 1980 is described from a cave in the municipality of Santa Maria da Vitória, in the Brazilian state of Bahia, northeastern Brazil. Spelaeogammarus titan sp. nov. differs from the others in the genus by its body length, rising up to 18.3 mm, the antenna 1 with accessory flagellum 6-articulate, propo- dus of the first gnathopod 1.8 X longer than basis, the largest in the genus, coxa 5 with posterior lobe slightly concave, inner ramus of pleopods with 10 to 13 setae, outer ramus of uropod 3 with 22 simple setae, and telson with 1 apical plus 3 subapical stout setae in each lobe. -
Biochemical Divergence Between Cavernicolous and Marine
The position of crustaceans within Arthropoda - Evidence from nine molecular loci and morphology GONZALO GIRIBET', STEFAN RICHTER2, GREGORY D. EDGECOMBE3 & WARD C. WHEELER4 Department of Organismic and Evolutionary- Biology, Museum of Comparative Zoology; Harvard University, Cambridge, Massachusetts, U.S.A. ' Friedrich-Schiller-UniversitdtJena, Instituifiir Spezielte Zoologie und Evolutionsbiologie, Jena, Germany 3Australian Museum, Sydney, NSW, Australia Division of Invertebrate Zoology, American Museum of Natural History, New York, U.S.A. ABSTRACT The monophyly of Crustacea, relationships of crustaceans to other arthropods, and internal phylogeny of Crustacea are appraised via parsimony analysis in a total evidence frame work. Data include sequences from three nuclear ribosomal genes, four nuclear coding genes, and two mitochondrial genes, together with 352 characters from external morphol ogy, internal anatomy, development, and mitochondrial gene order. Subjecting the com bined data set to 20 different parameter sets for variable gap and transversion costs, crusta ceans group with hexapods in Tetraconata across nearly all explored parameter space, and are members of a monophyletic Mandibulata across much of the parameter space. Crustacea is non-monophyletic at low indel costs, but monophyly is favored at higher indel costs, at which morphology exerts a greater influence. The most stable higher-level crusta cean groupings are Malacostraca, Branchiopoda, Branchiura + Pentastomida, and an ostracod-cirripede group. For combined data, the Thoracopoda and Maxillopoda concepts are unsupported, and Entomostraca is only retrieved under parameter sets of low congruence. Most of the current disagreement over deep divisions in Arthropoda (e.g., Mandibulata versus Paradoxopoda or Cormogonida versus Chelicerata) can be viewed as uncertainty regarding the position of the root in the arthropod cladogram rather than as fundamental topological disagreement as supported in earlier studies (e.g., Schizoramia versus Mandibulata or Atelocerata versus Tetraconata). -
From Ghost and Mud Shrimp
Zootaxa 4365 (3): 251–301 ISSN 1175-5326 (print edition) http://www.mapress.com/j/zt/ Article ZOOTAXA Copyright © 2017 Magnolia Press ISSN 1175-5334 (online edition) https://doi.org/10.11646/zootaxa.4365.3.1 http://zoobank.org/urn:lsid:zoobank.org:pub:C5AC71E8-2F60-448E-B50D-22B61AC11E6A Parasites (Isopoda: Epicaridea and Nematoda) from ghost and mud shrimp (Decapoda: Axiidea and Gebiidea) with descriptions of a new genus and a new species of bopyrid isopod and clarification of Pseudione Kossmann, 1881 CHRISTOPHER B. BOYKO1,4, JASON D. WILLIAMS2 & JEFFREY D. SHIELDS3 1Division of Invertebrate Zoology, American Museum of Natural History, Central Park West @ 79th St., New York, New York 10024, U.S.A. E-mail: [email protected] 2Department of Biology, Hofstra University, Hempstead, New York 11549, U.S.A. E-mail: [email protected] 3Department of Aquatic Health Sciences, Virginia Institute of Marine Science, College of William & Mary, P.O. Box 1346, Gloucester Point, Virginia 23062, U.S.A. E-mail: [email protected] 4Corresponding author Table of contents Abstract . 252 Introduction . 252 Methods and materials . 253 Taxonomy . 253 Isopoda Latreille, 1817 . 253 Bopyroidea Rafinesque, 1815 . 253 Ionidae H. Milne Edwards, 1840. 253 Ione Latreille, 1818 . 253 Ione cornuta Bate, 1864 . 254 Ione thompsoni Richardson, 1904. 255 Ione thoracica (Montagu, 1808) . 256 Bopyridae Rafinesque, 1815 . 260 Pseudioninae Codreanu, 1967 . 260 Acrobelione Bourdon, 1981. 260 Acrobelione halimedae n. sp. 260 Key to females of species of Acrobelione Bourdon, 1981 . 262 Gyge Cornalia & Panceri, 1861. 262 Gyge branchialis Cornalia & Panceri, 1861 . 262 Gyge ovalis (Shiino, 1939) . 264 Ionella Bonnier, 1900 . -
Biodiversity: the UK Overseas Territories. Peterborough, Joint Nature Conservation Committee
Biodiversity: the UK Overseas Territories Compiled by S. Oldfield Edited by D. Procter and L.V. Fleming ISBN: 1 86107 502 2 © Copyright Joint Nature Conservation Committee 1999 Illustrations and layout by Barry Larking Cover design Tracey Weeks Printed by CLE Citation. Procter, D., & Fleming, L.V., eds. 1999. Biodiversity: the UK Overseas Territories. Peterborough, Joint Nature Conservation Committee. Disclaimer: reference to legislation and convention texts in this document are correct to the best of our knowledge but must not be taken to infer definitive legal obligation. Cover photographs Front cover: Top right: Southern rockhopper penguin Eudyptes chrysocome chrysocome (Richard White/JNCC). The world’s largest concentrations of southern rockhopper penguin are found on the Falkland Islands. Centre left: Down Rope, Pitcairn Island, South Pacific (Deborah Procter/JNCC). The introduced rat population of Pitcairn Island has successfully been eradicated in a programme funded by the UK Government. Centre right: Male Anegada rock iguana Cyclura pinguis (Glen Gerber/FFI). The Anegada rock iguana has been the subject of a successful breeding and re-introduction programme funded by FCO and FFI in collaboration with the National Parks Trust of the British Virgin Islands. Back cover: Black-browed albatross Diomedea melanophris (Richard White/JNCC). Of the global breeding population of black-browed albatross, 80 % is found on the Falkland Islands and 10% on South Georgia. Background image on front and back cover: Shoal of fish (Charles Sheppard/Warwick -
Pleomothra Apletocheles and Godzilliognomus Frondosus, Two New Genera and Species of Remipede Crustaceans (Godzilliidae) from Anchialine Caves of the Bahamas
BULLETIN OF MARINE SCIENCE, 44(3): 1195-1206, 1989 CORAL REEF PAPER PLEOMOTHRA APLETOCHELES AND GODZILLIOGNOMUS FRONDOSUS, TWO NEW GENERA AND SPECIES OF REMIPEDE CRUSTACEANS (GODZILLIIDAE) FROM ANCHIALINE CAVES OF THE BAHAMAS Jill Yager ABSTRACT Two new genera and species of the crustacean class Remipedia, Pleornothra apletocheles and Godzi/liognornus frondosus, are described from anchialine caves on Abaco and Grand Bahama Island in the northern Bahamas. The new taxa are placed in the family Godzilliidae. The familial characters are revised, and a key to all species is included. Extensive collecting efforts in anchialine caves of the West Indies and along the coast of Quintana Roo, Mexico, have produced a number of interesting crustacean species (Bowman, 1987; Holsinger and Yager, 1985; Yager, 1987b). Recent field studies in the Bahamas have resulted in the collection of two new genera and species of the crustacean class Remipedia. These new taxa are described below. Their description brings the total number ofremipede species to nine. These new genera differ markedly from remipedes in the family Speleonectidae Yager (1981) and are placed in the family Godzilliidae (Schram et aI., 1986). Because the diagnosis ofthis family was originally based on a single species from caves in The Turks and Caicos (Yager and Schram, 1986), discovery of these new taxa requires expanding the familial definition. In addition, a key to the nine described species of remipedes is given below. The Bahamian archipelago is an area rich in drowned karst. Anchialine caves are submerged caves characterized by having inland surface openings and sub- surface connections to the nearby sea, These caves are very common throughout the Bahamian island chain. -
Microevolutionary Processes in the Stygobitic Genus Typhlocirolana (Isopoda Flabellifera Cirolanidae) As Inferred by Partial 12S and 16S Rdnasequences
J. Zool. Syst. Evol. Research 42 (2004) 27–32 Received on 14 January 2003 Ó 2004 Blackwell Verlag, Berlin ISSN 0947–5745 1Department of Animal Biology and Genetics ‘Leo Pardi’, University of Florence, Florence, Italy; 2Hydrobiology and Subterranean Ecology, University of Marrakech, Morocco; 3CNR-ISE, Florence, Italy Microevolutionary processes in the stygobitic genus Typhlocirolana (Isopoda Flabellifera Cirolanidae) as inferred by partial 12S and 16S rDNAsequences M. Baratti1,M.Yacoubi Khebiza2 and G. Messana3 Abstract Morocco is one of the regions of the world where many interesting discoveries have recently been made in the field of stygobiology, particularly concerning the cirolanid isopod fauna. One of the most interesting, variable and wide spread of these taxa is the perimediterranean stygobitic genus Typhlocirolana Racovitza, 1905, which has colonized the continental groundwater of Israel, Sicily, Spain, the Balearic Islands, Algeria and Morocco with several species. More populations have recently been found in Morocco, in some southern regions around Agadir, in High Atlas valleys near Marrakech and in the northeastern part of the country close to Oujda. The populations of these zones are not yet described and are the subject of this molecular analysis, together with other already designated species. To investigate the phylogenetic relationships and evolutionary history of the Typhlocirolana populations inhabiting the western Mediterranean basin, we analysed DNA sequences from the mitochondrial 12S and 16S rDNA genes. The molecular data were also used to infer the mechanisms driving the evolution of this thalassoid limnostygobitic cirolanid taxon, considered a good paleogeographic indicator because of its poor dispersion abilities. Vicariance because of paleogeographic events in the western Mediterranean basin played a prime evolutionary role in the Cirolanidae, as already suggested by morphological and ecological studies. -
Endemic Species of Christmas Island, Indian Ocean D.J
RECORDS OF THE WESTERN AUSTRALIAN MUSEUM 34 055–114 (2019) DOI: 10.18195/issn.0312-3162.34(2).2019.055-114 Endemic species of Christmas Island, Indian Ocean D.J. James1, P.T. Green2, W.F. Humphreys3,4 and J.C.Z. Woinarski5 1 73 Pozieres Ave, Milperra, New South Wales 2214, Australia. 2 Department of Ecology, Environment and Evolution, La Trobe University, Melbourne, Victoria 3083, Australia. 3 Western Australian Museum, Locked Bag 49, Welshpool DC, Western Australia 6986, Australia. 4 School of Biological Sciences, The University of Western Australia, 35 Stirling Highway, Crawley, Western Australia 6009, Australia. 5 NESP Threatened Species Recovery Hub, Charles Darwin University, Casuarina, Northern Territory 0909, Australia, Corresponding author: [email protected] ABSTRACT – Many oceanic islands have high levels of endemism, but also high rates of extinction, such that island species constitute a markedly disproportionate share of the world’s extinctions. One important foundation for the conservation of biodiversity on islands is an inventory of endemic species. In the absence of a comprehensive inventory, conservation effort often defaults to a focus on the better-known and more conspicuous species (typically mammals and birds). Although this component of island biota often needs such conservation attention, such focus may mean that less conspicuous endemic species (especially invertebrates) are neglected and suffer high rates of loss. In this paper, we review the available literature and online resources to compile a list of endemic species that is as comprehensive as possible for the 137 km2 oceanic Christmas Island, an Australian territory in the north-eastern Indian Ocean. -
Serotonin-Immunoreactive Neurons in the Ventral Nerve Cord of Remipedia (Crustacea): Support for a Sister Group Relationship of Remipedia and Hexapoda? Stemme Et Al
Serotonin-immunoreactive neurons in the ventral nerve cord of Remipedia (Crustacea): support for a sister group relationship of Remipedia and Hexapoda? Stemme et al. Stemme et al. BMC Evolutionary Biology 2013, 13:119 http://www.biomedcentral.com/1471-2148/13/119 Stemme et al. BMC Evolutionary Biology 2013, 13:119 http://www.biomedcentral.com/1471-2148/13/119 RESEARCH ARTICLE Open Access Serotonin-immunoreactive neurons in the ventral nerve cord of Remipedia (Crustacea): support for a sister group relationship of Remipedia and Hexapoda? Torben Stemme1, Thomas M Iliffe2, Björn M von Reumont3, Stefan Koenemann4, Steffen Harzsch5 and Gerd Bicker1* Abstract Background: Remipedia were initially seen as a primitive taxon within Pancrustacea based on characters considered ancestral, such as the homonomously segmented trunk. Meanwhile, several morphological and molecular studies proposed a more derived position of Remipedia within Pancrustacea, including a sister group relationship to Hexapoda. Because of these conflicting hypotheses, fresh data are crucial to contribute new insights into euarthropod phylogeny. The architecture of individually identifiable serotonin-immunoreactive neurons has successfully been used for phylogenetic considerations in Euarthropoda. Here, we identified neurons in three species of Remipedia with an antiserum against serotonin and compared our findings to reconstructed ground patterns in other euarthropod taxa. Additionally, we traced neurite connectivity and neuropil outlines using antisera against acetylated α-tubulin and synapsin. Results: The ventral nerve cord of Remipedia displays a typical rope-ladder-like arrangement of separate metameric ganglia linked by paired longitudinally projecting connectives. The peripheral projections comprise an intersegmental nerve, consisting of two branches that fuse shortly after exiting the connectives, and the segmental anterior and posterior nerve. -
Download-The-Data (Accessed on 12 July 2021))
diversity Article Integrative Taxonomy of New Zealand Stenopodidea (Crustacea: Decapoda) with New Species and Records for the Region Kareen E. Schnabel 1,* , Qi Kou 2,3 and Peng Xu 4 1 Coasts and Oceans Centre, National Institute of Water & Atmospheric Research, Private Bag 14901 Kilbirnie, Wellington 6241, New Zealand 2 Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, China; [email protected] 3 College of Marine Science, University of Chinese Academy of Sciences, Beijing 100049, China 4 Key Laboratory of Marine Ecosystem Dynamics, Second Institute of Oceanography, Ministry of Natural Resources, Hangzhou 310012, China; [email protected] * Correspondence: [email protected]; Tel.: +64-4-386-0862 Abstract: The New Zealand fauna of the crustacean infraorder Stenopodidea, the coral and sponge shrimps, is reviewed using both classical taxonomic and molecular tools. In addition to the three species so far recorded in the region, we report Spongicola goyi for the first time, and formally describe three new species of Spongicolidae. Following the morphological review and DNA sequencing of type specimens, we propose the synonymy of Spongiocaris yaldwyni with S. neocaledonensis and review a proposed broad Indo-West Pacific distribution range of Spongicoloides novaezelandiae. New records for the latter at nearly 54◦ South on the Macquarie Ridge provide the southernmost record for stenopodidean shrimp known to date. Citation: Schnabel, K.E.; Kou, Q.; Xu, Keywords: sponge shrimp; coral cleaner shrimp; taxonomy; cytochrome oxidase 1; 16S ribosomal P. Integrative Taxonomy of New RNA; association; southwest Pacific Ocean Zealand Stenopodidea (Crustacea: Decapoda) with New Species and Records for the Region.