Lustre* with ZFS* SC16 Presentation
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The Parallel File System Lustre
The parallel file system Lustre Roland Laifer STEINBUCH CENTRE FOR COMPUTING - SCC KIT – University of the State Rolandof Baden Laifer-Württemberg – Internal and SCC Storage Workshop National Laboratory of the Helmholtz Association www.kit.edu Overview Basic Lustre concepts Lustre status Vendors New features Pros and cons INSTITUTSLustre-, FAKULTÄTS systems-, ABTEILUNGSNAME at (inKIT der Masteransicht ändern) Complexity of underlying hardware Remarks on Lustre performance 2 16.4.2014 Roland Laifer – Internal SCC Storage Workshop Steinbuch Centre for Computing Basic Lustre concepts Client ClientClient Directory operations, file open/close File I/O & file locking metadata & concurrency INSTITUTS-, FAKULTÄTS-, ABTEILUNGSNAME (in der Recovery,Masteransicht ändern)file status, Metadata Server file creation Object Storage Server Lustre componets: Clients offer standard file system API (POSIX) Metadata servers (MDS) hold metadata, e.g. directory data, and store them on Metadata Targets (MDTs) Object Storage Servers (OSS) hold file contents and store them on Object Storage Targets (OSTs) All communicate efficiently over interconnects, e.g. with RDMA 3 16.4.2014 Roland Laifer – Internal SCC Storage Workshop Steinbuch Centre for Computing Lustre status (1) Huge user base about 70% of Top100 use Lustre Lustre HW + SW solutions available from many vendors: DDN (via resellers, e.g. HP, Dell), Xyratex – now Seagate (via resellers, e.g. Cray, HP), Bull, NEC, NetApp, EMC, SGI Lustre is Open Source INSTITUTS-, LotsFAKULTÄTS of organizational-, ABTEILUNGSNAME -
A Fog Storage Software Architecture for the Internet of Things Bastien Confais, Adrien Lebre, Benoît Parrein
A Fog storage software architecture for the Internet of Things Bastien Confais, Adrien Lebre, Benoît Parrein To cite this version: Bastien Confais, Adrien Lebre, Benoît Parrein. A Fog storage software architecture for the Internet of Things. Advances in Edge Computing: Massive Parallel Processing and Applications, IOS Press, pp.61-105, 2020, Advances in Parallel Computing, 978-1-64368-062-0. 10.3233/APC200004. hal- 02496105 HAL Id: hal-02496105 https://hal.archives-ouvertes.fr/hal-02496105 Submitted on 2 Mar 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. November 2019 A Fog storage software architecture for the Internet of Things Bastien CONFAIS a Adrien LEBRE b and Benoˆıt PARREIN c;1 a CNRS, LS2N, Polytech Nantes, rue Christian Pauc, Nantes, France b Institut Mines Telecom Atlantique, LS2N/Inria, 4 Rue Alfred Kastler, Nantes, France c Universite´ de Nantes, LS2N, Polytech Nantes, Nantes, France Abstract. The last prevision of the european Think Tank IDATE Digiworld esti- mates to 35 billion of connected devices in 2030 over the world just for the con- sumer market. This deep wave will be accompanied by a deluge of data, applica- tions and services. -
Evaluation of Active Storage Strategies for the Lustre Parallel File System
Evaluation of Active Storage Strategies for the Lustre Parallel File System Juan Piernas Jarek Nieplocha Evan J. Felix Pacific Northwest National Pacific Northwest National Pacific Northwest National Laboratory Laboratory Laboratory P.O. Box 999 P.O. Box 999 P.O. Box 999 Richland, WA 99352 Richland, WA 99352 Richland, WA 99352 [email protected] [email protected] [email protected] ABSTRACT umes of data remains a challenging problem. Despite the Active Storage provides an opportunity for reducing the improvements of storage capacities, the cost of bandwidth amount of data movement between storage and compute for moving data between the processing nodes and the stor- nodes of a parallel filesystem such as Lustre, and PVFS. age devices has not improved at the same rate as the disk ca- It allows certain types of data processing operations to be pacity. One approach to reduce the bandwidth requirements performed directly on the storage nodes of modern paral- between storage and compute devices is, when possible, to lel filesystems, near the data they manage. This is possible move computation closer to the storage devices. Similarly by exploiting the underutilized processor and memory re- to the processing-in-memory (PIM) approach for random ac- sources of storage nodes that are implemented using general cess memory [16], the active disk concept was proposed for purpose servers and operating systems. In this paper, we hard disk storage systems [1, 15, 24]. The active disk idea present a novel user-space implementation of Active Storage exploits the processing power of the embedded hard drive for Lustre, and compare it to the traditional kernel-based controller to process the data on the disk without the need implementation. -
On the Performance Variation in Modern Storage Stacks
On the Performance Variation in Modern Storage Stacks Zhen Cao1, Vasily Tarasov2, Hari Prasath Raman1, Dean Hildebrand2, and Erez Zadok1 1Stony Brook University and 2IBM Research—Almaden Appears in the proceedings of the 15th USENIX Conference on File and Storage Technologies (FAST’17) Abstract tions on different machines have to compete for heavily shared resources, such as network switches [9]. Ensuring stable performance for storage stacks is im- In this paper we focus on characterizing and analyz- portant, especially with the growth in popularity of ing performance variations arising from benchmarking hosted services where customers expect QoS guaran- a typical modern storage stack that consists of a file tees. The same requirement arises from benchmarking system, a block layer, and storage hardware. Storage settings as well. One would expect that repeated, care- stacks have been proven to be a critical contributor to fully controlled experiments might yield nearly identi- performance variation [18, 33, 40]. Furthermore, among cal performance results—but we found otherwise. We all system components, the storage stack is the corner- therefore undertook a study to characterize the amount stone of data-intensive applications, which become in- of variability in benchmarking modern storage stacks. In creasingly more important in the big data era [8, 21]. this paper we report on the techniques used and the re- Although our main focus here is reporting and analyz- sults of this study. We conducted many experiments us- ing the variations in benchmarking processes, we believe ing several popular workloads, file systems, and storage that our observations pave the way for understanding sta- devices—and varied many parameters across the entire bility issues in production systems. -
Lustre* Software Release 2.X Operations Manual Lustre* Software Release 2.X: Operations Manual Copyright © 2010, 2011 Oracle And/Or Its Affiliates
Lustre* Software Release 2.x Operations Manual Lustre* Software Release 2.x: Operations Manual Copyright © 2010, 2011 Oracle and/or its affiliates. (The original version of this Operations Manual without the Intel modifications.) Copyright © 2011, 2012, 2013 Intel Corporation. (Intel modifications to the original version of this Operations Man- ual.) Notwithstanding Intel’s ownership of the copyright in the modifications to the original version of this Operations Manual, as between Intel and Oracle, Oracle and/or its affiliates retain sole ownership of the copyright in the unmodified portions of this Operations Manual. Important Notice from Intel INFORMATION IN THIS DOCUMENT IS PROVIDED IN CONNECTION WITH INTEL PRODUCTS. NO LICENSE, EXPRESS OR IM- PLIED, BY ESTOPPEL OR OTHERWISE, TO ANY INTELLECTUAL PROPERTY RIGHTS IS GRANTED BY THIS DOCUMENT. EXCEPT AS PROVIDED IN INTEL'S TERMS AND CONDITIONS OF SALE FOR SUCH PRODUCTS, INTEL ASSUMES NO LIABILITY WHATSO- EVER AND INTEL DISCLAIMS ANY EXPRESS OR IMPLIED WARRANTY, RELATING TO SALE AND/OR USE OF INTEL PRODUCTS INCLUDING LIABILITY OR WARRANTIES RELATING TO FITNESS FOR A PARTICULAR PURPOSE, MERCHANTABILITY, OR IN- FRINGEMENT OF ANY PATENT, COPYRIGHT OR OTHER INTELLECTUAL PROPERTY RIGHT. A "Mission Critical Application" is any application in which failure of the Intel Product could result, directly or indirectly, in personal injury or death. SHOULD YOU PURCHASE OR USE INTEL'S PRODUCTS FOR ANY SUCH MISSION CRITICAL APPLICATION, YOU SHALL IN- DEMNIFY AND HOLD INTEL AND ITS SUBSIDIARIES, SUBCONTRACTORS AND AFFILIATES, AND THE DIRECTORS, OFFICERS, AND EMPLOYEES OF EACH, HARMLESS AGAINST ALL CLAIMS COSTS, DAMAGES, AND EXPENSES AND REASONABLE AT- TORNEYS' FEES ARISING OUT OF, DIRECTLY OR INDIRECTLY, ANY CLAIM OF PRODUCT LIABILITY, PERSONAL INJURY, OR DEATH ARISING IN ANY WAY OUT OF SUCH MISSION CRITICAL APPLICATION, WHETHER OR NOT INTEL OR ITS SUBCON- TRACTOR WAS NEGLIGENT IN THE DESIGN, MANUFACTURE, OR WARNING OF THE INTEL PRODUCT OR ANY OF ITS PARTS. -
Parallel File Systems for HPC Introduction to Lustre
Parallel File Systems for HPC Introduction to Lustre Piero Calucci Scuola Internazionale Superiore di Studi Avanzati Trieste November 2008 Advanced School in High Performance and Grid Computing Outline 1 The Need for Shared Storage 2 The Lustre File System 3 Other Parallel File Systems Parallel File Systems for HPC Cluster & Storage Piero Calucci Shared Storage Lustre Other Parallel File Systems A typical cluster setup with a Master node, several computing nodes and shared storage. Nodes have little or no local storage. Parallel File Systems for HPC Cluster & Storage Piero Calucci The Old-Style Solution Shared Storage Lustre Other Parallel File Systems • a single storage server quickly becomes a bottleneck • if the cluster grows in time (quite typical for initially small installations) storage requirements also grow, sometimes at a higher rate • adding space (disk) is usually easy • adding speed (both bandwidth and IOpS) is hard and usually involves expensive upgrade of existing hardware • e.g. you start with an NFS box with a certain amount of disk space, memory and processor power, then add disks to the same box Parallel File Systems for HPC Cluster & Storage Piero Calucci The Old-Style Solution /2 Shared Storage Lustre • e.g. you start with an NFS box with a certain amount of Other Parallel disk space, memory and processor power File Systems • adding space is just a matter of plugging in some more disks, ot ar worst adding a new controller with an external port to connect external disks • but unless you planned for -
Decentralising Big Data Processing Scott Ross Brisbane
School of Computer Science and Engineering Faculty of Engineering The University of New South Wales Decentralising Big Data Processing by Scott Ross Brisbane Thesis submitted as a requirement for the degree of Bachelor of Engineering (Software) Submitted: October 2016 Student ID: z3459393 Supervisor: Dr. Xiwei Xu Topic ID: 3692 Decentralising Big Data Processing Scott Ross Brisbane Abstract Big data processing and analysis is becoming an increasingly important part of modern society as corporations and government organisations seek to draw insight from the vast amount of data they are storing. The traditional approach to such data processing is to use the popular Hadoop framework which uses HDFS (Hadoop Distributed File System) to store and stream data to analytics applications written in the MapReduce model. As organisations seek to share data and results with third parties, HDFS remains inadequate for such tasks in many ways. This work looks at replacing HDFS with a decentralised data store that is better suited to sharing data between organisations. The best fit for such a replacement is chosen to be the decentralised hypermedia distribution protocol IPFS (Interplanetary File System), that is built around the aim of connecting all peers in it's network with the same set of content addressed files. ii Scott Ross Brisbane Decentralising Big Data Processing Abbreviations API Application Programming Interface AWS Amazon Web Services CLI Command Line Interface DHT Distributed Hash Table DNS Domain Name System EC2 Elastic Compute Cloud FTP File Transfer Protocol HDFS Hadoop Distributed File System HPC High-Performance Computing IPFS InterPlanetary File System IPNS InterPlanetary Naming System SFTP Secure File Transfer Protocol UI User Interface iii Decentralising Big Data Processing Scott Ross Brisbane Contents 1 Introduction 1 2 Background 3 2.1 The Hadoop Distributed File System . -
Understanding Lustre Filesystem Internals
ORNL/TM-2009/117 Understanding Lustre Filesystem Internals April 2009 Prepared by Feiyi Wang Sarp Oral Galen Shipman National Center for Computational Sciences Oleg Drokin Tom Wang Isaac Huang Sun Microsystems Inc. DOCUMENT AVAILABILITY Reports produced after January 1, 1996, are generally available free via the U.S. Department of Energy (DOE) Information Bridge. Web site http://www.osti.gov/bridge Reports produced before January 1, 1996, may be purchased by members of the public from the following source. National Technical Information Service 5285 Port Royal Road Springfield, VA 22161 Telephone 703-605-6000 (1-800-553-6847) TDD 703-487-4639 Fax 703-605-6900 E-mail [email protected] Web site http://www.ntis.gov/support/ordernowabout.htm Reports are available to DOE employees, DOE contractors, Energy Technology Data Exchange (ETDE) representatives, and International Nuclear Information System (INIS) representatives from the following source. Office of Scientific and Technical Information P.O. Box 62 Oak Ridge, TN 37831 Telephone 865-576-8401 Fax 865-576-5728 E-mail [email protected] Web site http://www.osti.gov/contact.html This report was prepared as an account of work sponsored by an agency of the United States Government. Neither the United States Government nor any agency thereof, nor any of their employees, makes any warranty, express or implied, or assumes any legal liability or responsibility for the accuracy, completeness, or usefulness of any information, apparatus, product, or process disclosed, or represents that its use would not infringe privately owned rights. Reference herein to any specific commercial product, process, or service by trade name, trademark, manufacturer, or otherwise, does not necessarily constitute or imply its endorsement, recommendation, or favoring by the United States Government or any agency thereof. -
Openzfs on Linux Hepix 2014 October 16, 2014 Brian Behlendorf [email protected]
OpenZFS on Linux HEPiX 2014 October 16, 2014 Brian Behlendorf [email protected] LLNL-PRES-XXXXXX This work was performed under the auspices of the U.S. Department of Energy by Lawrence Livermore National Laboratory under Contract DE-AC52-07NA27344. Lawrence Livermore National Security, LLC 1 Lawrence Livermore National Laboratory LLNL-PRES-xxxxxx High Performance Computing Advanced Simulation Massive Scale Data Intensive Top 500 (June 2014) #3 Sequoia 20.1 Peak PFLOP/s 1,572,864 cores 55 PB of storage at 850 GB/s #9 Vulcan 5.0 Peak PFLOPS/s 393,216 cores 6.7 PB of storage at 106 GB/s World class computing resources 2 Lawrence Livermore National Laboratory LLNL-PRES-xxxxxx Linux Clusters 2001 – First Linux cluster Today – ~10 large Linux clusters (100– 3,000 nodes) and 10-20 smaller ones Near-commodity hardware Open source software stack (TOSS) Tri-Labratory Operating System Stack Modified RHEL targeted for HPC RHEL kernel optimized for clusters Moab and SLURM for scheduling Lustre parallel filesystem Additional packages for monitoring, power/console, compilers, etc LLNL Loves Linux 3 Lawrence Livermore National Laboratory LLNL-PRES-xxxxxx Lustre Lustre is our parallel filesystem of choice Livermore Computing Filesystems: Open – 20PB in 5 filesystems Secure – 22PB in 3 filesystems Plus the 55PB Sequoia filesystem 1000+ storage servers Billions of files Users want: Access to their data from every cluster Good performance High availability How do we design a system to handle this? Lustre is used extensively -
Comparative Analysis of Distributed and Parallel File Systems' Internal Techniques
Comparative Analysis of Distributed and Parallel File Systems’ Internal Techniques Viacheslav Dubeyko Content 1 TERMINOLOGY AND ABBREVIATIONS ................................................................................ 4 2 INTRODUCTION......................................................................................................................... 5 3 COMPARATIVE ANALYSIS METHODOLOGY ....................................................................... 5 4 FILE SYSTEM FEATURES CLASSIFICATION ........................................................................ 5 4.1 Distributed File Systems ............................................................................................................................ 6 4.1.1 HDFS ..................................................................................................................................................... 6 4.1.2 GFS (Google File System) ....................................................................................................................... 7 4.1.3 InterMezzo ............................................................................................................................................ 9 4.1.4 CodA .................................................................................................................................................... 10 4.1.5 Ceph.................................................................................................................................................... 12 4.1.6 DDFS .................................................................................................................................................. -
Introduction to Distributed File Systems. Orangefs Experience 0.05 [Width=0.4]Lvee-Logo-Winter
Introduction to distributed file systems. OrangeFS experience Andrew Savchenko NRNU MEPhI, Moscow, Russia 16 February 2013 . .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. Outline 1. Introduction 2. Species of distributed file systems 3. Behind the curtain 4. OrangeFS 5. Summary . .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. Introduction Why one needs a non-local file system? • a large data storage • a high performance data storage • redundant and highly available solutions There are dozens of them: 72 only on wiki[1], more IRL. Focus on free software solutions. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. Introduction Why one needs a non-local file system? • a large data storage • a high performance data storage • redundant and highly available solutions There are dozens of them: 72 only on wiki[1], more IRL. Focus on free software solutions. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. Species of distributed file systems Network Clustered Distributed Terminology is ambiguous!. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. Network file systems client1 client2 clientN server storage A single server (or at least an appearance) and multiple network clients. Examples: NFS, CIFS. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. Clustered file systems server1 server2 serverN storage Servers sharing the same local storage (usually SAN[2] at block level). shared storage architecture. Examples: GFS2[3], OCFS2[4]. .. .. .. .. . -
Lustre / ZFS at Indiana University
Lustre / ZFS at Indiana University HPC-IODC Workshop, Frankfurt June 28, 2018 Stephen Simms Manager, High Performance File Systems [email protected] Tom Crowe Team Lead, High Performance File Systems [email protected] Greetings from Indiana University Indiana University has 8 Campuses Fall 2017 Total Student Count 93,934 IU has a central IT organization • UITS • 1200 Full / Part Time Staff • Approximately $184M Budget • HPC resources are managed by Research Technologies division with $15.9M Budget Lustre at Indiana University 2005 – Small HP SFS Install, 1 Gb interconnnects 2006 – Data Capacitor (535 TB, DDN 9550s, 10Gb) 2008 – Data Capacitor WAN (339 TB, DDN 9550, 10Gb) 2011 – Data Capacitor 1.5 (1.1 PB, DDN SFA-10K, 10Gb) PAINFUL MIGRATION using rsync 2013 – Data Capacitor II (5.3 PB, DDN SFA12K-40s, FDR) 2015 – Wrangler with TACC (10 PB, Dell, FDR) 2016 – Data Capacitor RAM (35 TB SSD, HP, FDR-10) 2016 DC-WAN 2 We wanted to replace our DDN 9550 WAN file system • 1.1 PB DC 1.5 DDN SFA10K • 5 years of reliable production, now aging • Recycled our 4 x 40 Gb Ethernet OSS nodes • Upgrade to Lustre with IU developed nodemap • UID mapping for mounts over distance We wanted to give laboratories bounded space • DDN developed project quota were not available • Used a combination of ZFS quotas and Lustre pools We wanted some operational experience with Lustre / ZFS Why ZFS? • Extreme Scaling • Max Lustre File System Size • LDISKFS – 512 PB • ZFS – 8 EB • Snapshots • Supported in Lustre version 2.10 • Online Data Scrubbing • Provides error detection and