Møller–Plesset Perturbation Theory: from Small Molecule Methods to Methods for Thousands of Atoms Dieter Cremer∗
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The Spin Distribution Within Large Molecular Radicals
A QUANTUM CHEMICAL APPROACH TO THE DETERMINATION OF THE SPIN DISTRIBUTION WITHIN LARGE MOLECULAR RADICALS By MARSHALL GEORGE CORY, JR. A DISSERTATION PRESENTED TO THE GRADUATE SCHOOL OF THE UNIVERSITY OF FLORIDA IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY . < UNIVERSITY OF FLORIDA ' ' 1994 4 : ? To my beloved mother Catherine, my father Marshall Sr., his wife Jeannie and my dear wife, Genny ACKNOWLEDGMENTS It is impossible to acknowledge all who have contributed to my University of Rorida experience. With intentions to slight none, I choose to mention a few who "stick out" for one reason or another. • • Dr. Michael Zemer, for his constant enthusiasm. • Dr. Charles Taylor; Charlie, the "a la personne qui a garde la porte du club au moment opportun" would not have been necessary if you and one other had not ran and hid like "wimps". • Dr. Ricardo Longo, my best friend at QTP and the best read graduate student I know of, or likely ever will know of. • Genny Cory, for putting up with this nutty endeavor over the years. Finally to all the friends I can remember at this moment, Rajiv and Priya, Ricky and Ivani, Quim, Steve and Trish, Christin, Ya-Wen, Billy Bob, Chris, Mark, Dave, Zhengy, and of course Monique. To the small multitude of others, whose friendships I have enjoyed and whose names escape me at this moment, forgive me for not remembering in time. ill TABLE OF CONTENTS ACKNOWLEDGMENTS iu LIST OF TABLES vi LIST OF FIGURES vii ABSTRACT viii CHAPTERS 1 INTRODUCTION 1 The ESR Experiment 1 The Isotropic -
Correlation.Pdf
INTRODUCTION TO THE ELECTRONIC CORRELATION PROBLEM PAUL E.S. WORMER Institute of Theoretical Chemistry, University of Nijmegen, Toernooiveld, 6525 ED Nijmegen, The Netherlands Contents 1 Introduction 2 2 Rayleigh-SchrÄodinger perturbation theory 4 3 M¿ller-Plesset perturbation theory 7 4 Diagrammatic perturbation theory 9 5 Unlinked clusters 14 6 Convergence of MP perturbation theory 17 7 Second quantization 18 8 Coupled cluster Ansatz 21 9 Coupled cluster equations 26 9.1 Exact CC equations . 26 9.2 The CCD equations . 30 9.3 CC theory versus MP theory . 32 9.4 CCSD(T) . 33 A Hartree-Fock, Slater-Condon, Brillouin 34 B Exponential structure of the wavefunction 37 C Bibliography 40 1 1 Introduction These are notes for a six hour lecture series on the electronic correlation problem, given by the author at a Dutch national winterschool in 1999. The main purpose of this course was to give some theoretical background on the M¿ller-Plesset and coupled cluster methods. Both computational methods are available in many quantum chemical \black box" programs. The audi- ence consisted of graduate students, mostly with an undergraduate chemistry education and doing research in theoretical chemistry. A basic knowledge of quantum mechanics and quantum chemistry is pre- supposed. In particular a knowledge of Slater determinants, Slater-Condon rules and Hartree-Fock theory is a prerequisite of understanding the following notes. In Appendix A this theory is reviewed briefly. Because of time limitations hardly any proofs are given, the theory is sketchily outlined. No attempt is made to integrate out the spin, the theory is formulated in terms of spin-orbitals only. -
Effective Hamiltonians Derived from Equation-Of-Motion Coupled-Cluster
Effective Hamiltonians derived from equation-of-motion coupled-cluster wave-functions: Theory and application to the Hubbard and Heisenberg Hamiltonians Pavel Pokhilkoa and Anna I. Krylova a Department of Chemistry, University of Southern California, Los Angeles, California 90089-0482 Effective Hamiltonians, which are commonly used for fitting experimental observ- ables, provide a coarse-grained representation of exact many-electron states obtained in quantum chemistry calculations; however, the mapping between the two is not triv- ial. In this contribution, we apply Bloch's formalism to equation-of-motion coupled- cluster (EOM-CC) wave functions to rigorously derive effective Hamiltonians in the Bloch's and des Cloizeaux's forms. We report the key equations and illustrate the theory by examples of systems with electronic states of covalent and ionic characters. We show that the Hubbard and Heisenberg Hamiltonians are extracted directly from the so-obtained effective Hamiltonians. By making quantitative connections between many-body states and simple models, the approach also facilitates the analysis of the correlated wave functions. Artifacts affecting the quality of electronic structure calculations such as spin contamination are also discussed. I. INTRODUCTION Coarse graining is commonly used in computational chemistry and physics. It is ex- ploited in a number of classic models serving as a foundation of modern solid-state physics: tight binding[1, 2], Drude{Sommerfeld's model[3{5], Hubbard's [6] and Heisenberg's[7{9] Hamiltonians. These models explain macroscopic properties of materials through effective interactions whose strengths are treated as model parameters. The values of these pa- rameters are determined either from more sophisticated theoretical models or by fitting to experimental observables. -
Coupled Cluster Methods in Quantum Chemistry
Title: Coupled Cluster methods in quantum chemistry Name: Thorsten Rohwedder, Reinhold Schneider Al./Addr.: Technische UniversitatBerlin Coupled Cluster methods in quantum chemistry Short description Coupled Cluster methods applied in quantum chemistry reformulate the electronic Schrodinger equation as a nonlinear equation, enabling the computation of size- consistent high-precision approximations of the ground state solution for weakly cor- related systems. Introduction The Coupled Cluster method (CC method) is one of the most successful and frequently used approaches for the computation of atomic and molecular electronic structure, i.e. for the solution of the stationary electronic Schrodinger equation, whenever high ac- curacy is required. In contrast to Hartree-Fock type methods (HF) or methods from density functional theory (see the respective entries in this work), high accuracy meth- ods have to account in particular for the quantum-mechanical phenomenon of electronic correlation. If a preliminarily calculated reference solution { usually provided by a HF calculation { already is a good approximation to the sought ground state wave func- tion, the problem is said to be weakly correlated. CC as a post-Hartree-Fock method (also see the entry by M. Lewin) then enables an ecient, accurate and size-extensive description of solutions of the electronic Schrodingerequation. In this context, the 2 size-extensivity of the CC approach is a key aspect, re ecting the correct scaling of correlation energy with respect to the number of electrons. CC methods were initially developed for the treatment of many body quantum systems in nuclear physics in the 1950s and were used for quantum chemical calculations since the 1966 initial work by Paldus and Czek,see (Czek,1991) for a historical overview. -
The Molpro Quantum Chemistry Package
The Molpro Quantum Chemistry package Hans-Joachim Werner,1, a) Peter J. Knowles,2, b) Frederick R. Manby,3, c) Joshua A. Black,1, d) Klaus Doll,1, e) Andreas Heßelmann,1, f) Daniel Kats,4, g) Andreas K¨ohn,1, h) Tatiana Korona,5, i) David A. Kreplin,1, j) Qianli Ma,1, k) Thomas F. Miller, III,6, l) Alexander Mitrushchenkov,7, m) Kirk A. Peterson,8, n) Iakov Polyak,2, o) 1, p) 2, q) Guntram Rauhut, and Marat Sibaev 1)Institut f¨ur Theoretische Chemie, Universit¨at Stuttgart, Pfaffenwaldring 55, 70569 Stuttgart, Germany 2)School of Chemistry, Cardiff University, Main Building, Park Place, Cardiff CF10 3AT, United Kingdom 3)School of Chemistry, University of Bristol, Cantock’s Close, Bristol BS8 1TS, United Kingdom 4)Max-Planck Institute for Solid State Research, Heisenbergstraße 1, 70569 Stuttgart, Germany 5)Faculty of Chemistry, University of Warsaw, L. Pasteura 1 St., 02-093 Warsaw, Poland 6)Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, United States 7)MSME, Univ Gustave Eiffel, UPEC, CNRS, F-77454, Marne-la- Vall´ee, France 8)Washington State University, Department of Chemistry, Pullman, WA 99164-4630 1 Molpro is a general purpose quantum chemistry software package with a long devel- opment history. It was originally focused on accurate wavefunction calculations for small molecules, but now has many additional distinctive capabilities that include, inter alia, local correlation approximations combined with explicit correlation, highly efficient implementations of single-reference correlation methods, robust and efficient multireference methods for large molecules, projection embedding and anharmonic vibrational spectra. -
Massive-Parallel Implementation of the Resolution-Of-Identity Coupled
Article Cite This: J. Chem. Theory Comput. 2019, 15, 4721−4734 pubs.acs.org/JCTC Massive-Parallel Implementation of the Resolution-of-Identity Coupled-Cluster Approaches in the Numeric Atom-Centered Orbital Framework for Molecular Systems † § † † ‡ § § Tonghao Shen, , Zhenyu Zhu, Igor Ying Zhang,*, , , and Matthias Scheffler † Department of Chemistry, Fudan University, Shanghai 200433, China ‡ Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, MOE Key Laboratory of Computational Physical Science, Fudan University, Shanghai 200433, China § Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany *S Supporting Information ABSTRACT: We present a massive-parallel implementation of the resolution of identity (RI) coupled-cluster approach that includes single, double, and perturbatively triple excitations, namely, RI-CCSD(T), in the FHI-aims package for molecular systems. A domain-based distributed-memory algorithm in the MPI/OpenMP hybrid framework has been designed to effectively utilize the memory bandwidth and significantly minimize the interconnect communication, particularly for the tensor contraction in the evaluation of the particle−particle ladder term. Our implementation features a rigorous avoidance of the on- the-fly disk storage and excellent strong scaling of up to 10 000 and more cores. Taking a set of molecules with different sizes, we demonstrate that the parallel performance of our CCSD(T) code is competitive with the CC implementations in state-of- the-art high-performance-computing computational chemistry packages. We also demonstrate that the numerical error due to the use of RI approximation in our RI-CCSD(T) method is negligibly small. Together with the correlation-consistent numeric atom-centered orbital (NAO) basis sets, NAO-VCC-nZ, the method is applied to produce accurate theoretical reference data for 22 bio-oriented weak interactions (S22), 11 conformational energies of gaseous cysteine conformers (CYCONF), and 32 Downloaded via FRITZ HABER INST DER MPI on January 8, 2021 at 22:13:06 (UTC). -
Lawrence Berkeley National Laboratory Recent Work
Lawrence Berkeley National Laboratory Recent Work Title Beyond the Coulson-Fischer point: characterizing single excitation CI and TDDFT for excited states in single bond dissociations. Permalink https://escholarship.org/uc/item/5gq7j5p3 Journal Physical chemistry chemical physics : PCCP, 21(39) ISSN 1463-9076 Authors Hait, Diptarka Rettig, Adam Head-Gordon, Martin Publication Date 2019-10-01 DOI 10.1039/c9cp04452c Peer reviewed eScholarship.org Powered by the California Digital Library University of California Beyond the Coulson-Fischer point: Characterizing single excitation CI and TDDFT for excited states in single bond dissociations Diptarka Hait,1, a) Adam Rettig,1, a) and Martin Head-Gordon1, 2, b) 1)Kenneth S. Pitzer Center for Theoretical Chemistry, Department of Chemistry, University of California, Berkeley, California 94720, USA 2)Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA Linear response time dependent density functional theory (TDDFT), which builds upon configuration interaction singles (CIS) and TD-Hartree-Fock (TDHF), is the most widely used class of excited state quantum chemistry methods and is often employed to study photochemical processes. This paper studies the behavior of the resulting excited state potential energy surfaces beyond the Coulson-Fischer (CF) point in single bond dissociations, when the optimal reference determinant is spin- polarized. Many excited states exhibit sharp kinks at the CF point, and connect to different dissociation limits via a zone of unphysical concave curvature. In particular, the unrestricted MS = 0 lowest triplet T1 state changes character, and does not dissociate into ground state fragments. The unrestricted MS = ±1 T1 CIS states better approximate the physical dissociation limit, but their degeneracy is broken beyond the CF point for most single bond dissociations. -
Orbital Optimized Unitary Coupled Cluster Theory for Quantum Computer
PHYSICAL REVIEW RESEARCH 2, 033421 (2020) Orbital optimized unitary coupled cluster theory for quantum computer Wataru Mizukami ,1,2,3,* Kosuke Mitarai,1,2,4,† Yuya O. Nakagawa,4 Takahiro Yamamoto,4 Tennin Yan,4 and Yu-ya Ohnishi 5,‡ 1Graduate School of Engineering Science, Osaka University, 1-3 Machikaneyama, Toyonaka, Osaka 560-8531, Japan 2Center for Quantum Information and Quantum Biology, Institute for Open and Transdisciplinary Research Initiatives, Osaka University, Osaka 560-8531, Japan 3JST, PRESTO, 4-1-8 Honcho, Kawaguchi, Saitama 332-0012, Japan 4QunaSys Inc., Aqua Hakusan Building 9F, 1-13-7 Hakusan, Bunkyo, Tokyo 113-0001, Japan 5Materials Informatics Initiative, RD Technology & Digital Transformation Center, JSR Corporation, 100 Kawajiri-cho, Yokkaichi, Mie, 510-8552, Japan (Received 23 March 2020; accepted 11 August 2020; published 16 September 2020) We propose an orbital optimized method for unitary coupled cluster theory (OO-UCC) within the variational quantum eigensolver (VQE) framework for quantum computers. OO-UCC variationally determines the coupled cluster amplitudes and also molecular orbital coefficients. Owing to its fully variational nature, first-order properties are readily available. This feature allows the optimization of molecular structures in VQE without solving any additional equations. Furthermore, the method requires smaller active space and shallower quantum circuits than UCC to achieve the same accuracy. We present numerical examples of OO-UCC using quantum simulators, which include the geometry optimization of water and ammonia molecules using analytical first derivatives of the VQE. DOI: 10.1103/PhysRevResearch.2.033421 I. INTRODUCTION riational properties, the validity of TCC is strongly dependent on the reference Hartree–Fock wave function. -
Modern Quantum Chemistry with [Open]Molcas
Research Collection Journal Article Modern quantum chemistry with [Open]Molcas Author(s): Aquilante, Francesco; Baiardi, Alberto; Freitag, Leon; Knecht, Stefan; Reiher, Markus; Stein, Christopher J.; et al. Publication Date: 2020-06-07 Permanent Link: https://doi.org/10.3929/ethz-b-000420242 Originally published in: The Journal of Chemical Physics 152(21), http://doi.org/10.1063/5.0004835 Rights / License: Creative Commons Attribution 4.0 International This page was generated automatically upon download from the ETH Zurich Research Collection. For more information please consult the Terms of use. ETH Library Modern quantum chemistry with [Open]Molcas Cite as: J. Chem. Phys. 152, 214117 (2020); https://doi.org/10.1063/5.0004835 Submitted: 17 February 2020 . Accepted: 11 May 2020 . Published Online: 05 June 2020 Francesco Aquilante , Jochen Autschbach , Alberto Baiardi , Stefano Battaglia , Veniamin A. Borin , Liviu F. Chibotaru , Irene Conti , Luca De Vico , Mickaël Delcey , Ignacio Fdez. Galván , Nicolas Ferré , Leon Freitag , Marco Garavelli , Xuejun Gong , Stefan Knecht , Ernst D. Larsson , Roland Lindh , Marcus Lundberg , Per Åke Malmqvist , Artur Nenov , Jesper Norell , Michael Odelius , Massimo Olivucci , Thomas B. Pedersen , Laura Pedraza-González , Quan M. Phung , Kristine Pierloot , Markus Reiher , Igor Schapiro , Javier Segarra-Martí , Francesco Segatta , Luis Seijo , Saumik Sen , Dumitru-Claudiu Sergentu , Christopher J. Stein , Liviu Ungur , Morgane Vacher , Alessio Valentini , and Valera Veryazov COLLECTIONS Paper published -
Spin Balanced Unrestricted Kohn-Sham Formalism Artëm Masunov Theoretical Division,T-12, Los Alamos National Laboratory, Mail Stop B268, Los Alamos, NM 87545
Where Density Functional Theory Goes Wrong and How to Fix it: Spin Balanced Unrestricted Kohn-Sham Formalism Artëm Masunov Theoretical Division,T-12, Los Alamos National Laboratory, Mail Stop B268, Los Alamos, NM 87545. Submitted October 22, 2003; [email protected] The functional form of this XC potential remains unknown to ABSTRACT: Kohn-Sham (KS) formalism of Density the present day. However, numerous approximations had been Functional Theory is modified to include the systems with suggested,4 the remarkable accuracy of KS calculations results strong non-dynamic electron correlation. Unlike in extended from this long quest for better XC functional. One may classify KS and broken symmetry unrestricted KS formalisms, these approximations into local (depending on electron density, or cases of both singlet-triplet and aufbau instabilities are spin density), semilocal (including gradient corrections), and covered, while preserving a pure spin-state. The nonlocal (orbital dependent functionals). In this classification HF straightforward implementation is suggested, which method is just one of non-local XC functionals, treating exchange consists of placing spin constraints on complex unrestricted exactly and completely neglecting electron correlation. Hartree-Fock wave function. Alternative approximate First and the most obvious reason for RKS performance approach consists of using the perfect pairing inconsistency for the “difficult” systems, mentioned above, is implementation with the natural orbitals of unrestricted KS imperfection of the approximate XC functionals. Second, and less method and square roots of their occupation numbers as known reason is the fact that KS approach is no longer valid if configuration weights without optimization, followed by a electron density is not v-representable,5 i.e., there is no ground posteriori exchange-correlation correction. -
Nwchem: Past, Present, and Future
1 NWChem: Past, Present, and Future NWChem: Past, Present, and Future a) E. Apra,1 E. J. Bylaska,1 W. A. de Jong,2 N. Govind,1 K. Kowalski,1, T. P. Straatsma,3 M. Valiev,1 H. J. 4 5 6 5 7 8 9 J. van Dam, Y. Alexeev, J. Anchell, V. Anisimov, F. W. Aquino, R. Atta-Fynn, J. Autschbach, N. P. Bauman,1 J. C. Becca,10 D. E. Bernholdt,11 K. Bhaskaran-Nair,12 S. Bogatko,13 P. Borowski,14 J. Boschen,15 J. Brabec,16 A. Bruner,17 E. Cauet,18 Y. Chen,19 G. N. Chuev,20 C. J. Cramer,21 J. Daily,1 22 23 9 24 11 25 M. J. O. Deegan, T. H. Dunning Jr., M. Dupuis, K. G. Dyall, G. I. Fann, S. A. Fischer, A. Fonari,26 H. Fruchtl,27 L. Gagliardi,21 J. Garza,28 N. Gawande,1 S. Ghosh,29 K. Glaesemann,1 A. W. Gotz,30 6 31 32 33 34 2 10 J. Hammond, V. Helms, E. D. Hermes, K. Hirao, S. Hirata, M. Jacquelin, L. Jensen, B. G. Johnson,35 H. Jonsson,36 R. A. Kendall,11 M. Klemm,6 R. Kobayashi,37 V. Konkov,38 S. Krishnamoorthy,1 M. 19 39 40 41 42 43 44 Krishnan, Z. Lin, R. D. Lins, R. J. Little eld, A. J. Logsdail, K. Lopata, W. Ma, A. V. Marenich,45 J. Martin del Campo,46 D. Mejia-Rodriguez,47 J. E. Moore,6 J. M. Mullin,48 T. Nakajima,49 D. R. Nascimento,1 J. -
Modern Quantum Chemistry with [Open]Molcas
Modern quantum chemistry with [Open]Molcas Cite as: J. Chem. Phys. 152, 214117 (2020); https://doi.org/10.1063/5.0004835 Submitted: 17 February 2020 . Accepted: 11 May 2020 . Published Online: 05 June 2020 Francesco Aquilante , Jochen Autschbach , Alberto Baiardi , Stefano Battaglia , Veniamin A. Borin , Liviu F. Chibotaru , Irene Conti , Luca De Vico , Mickaël Delcey , Ignacio Fdez. Galván , Nicolas Ferré , Leon Freitag , Marco Garavelli , Xuejun Gong , Stefan Knecht , Ernst D. Larsson , Roland Lindh , Marcus Lundberg , Per Åke Malmqvist , Artur Nenov , Jesper Norell , Michael Odelius , Massimo Olivucci , Thomas B. Pedersen , Laura Pedraza-González , Quan M. Phung , Kristine Pierloot , Markus Reiher , Igor Schapiro , Javier Segarra-Martí , Francesco Segatta , Luis Seijo , Saumik Sen , Dumitru-Claudiu Sergentu , Christopher J. Stein , Liviu Ungur , Morgane Vacher , Alessio Valentini , and Valera Veryazov COLLECTIONS Paper published as part of the special topic on Electronic Structure Software Note: This article is part of the JCP Special Topic on Electronic Structure Software. ARTICLES YOU MAY BE INTERESTED IN Dalton Project: A Python platform for molecular- and electronic-structure simulations of complex systems The Journal of Chemical Physics 152, 214115 (2020); https://doi.org/10.1063/1.5144298 The ORCA quantum chemistry program package The Journal of Chemical Physics 152, 224108 (2020); https://doi.org/10.1063/5.0004608 Coupled-cluster techniques for computational chemistry: The CFOUR program package The Journal of Chemical Physics 152, 214108 (2020); https://doi.org/10.1063/5.0004837 J. Chem. Phys. 152, 214117 (2020); https://doi.org/10.1063/5.0004835 152, 214117 © 2020 Author(s). The Journal ARTICLE of Chemical Physics scitation.org/journal/jcp Modern quantum chemistry with [Open]Molcas Cite as: J.