Diptera: Drosophilidae): Candidate Pheromones and Field Responses
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Wolbachia-Mitochondrial DNA Associations in Transitional Populations of Rhagoletis Cerasi
insects Communication Wolbachia-Mitochondrial DNA Associations in Transitional Populations of Rhagoletis cerasi 1, , 1 1, 2, Vid Bakovic * y , Martin Schebeck , Christian Stauffer z and Hannes Schuler z 1 Department of Forest and Soil Sciences, University of Natural Resources and Life Sciences Vienna, BOKU, Peter-Jordan-Strasse 82/I, A-1190 Vienna, Austria; [email protected] (M.S.); christian.stauff[email protected] (C.S.) 2 Faculty of Science and Technology, Free University of Bozen-Bolzano, Universitätsplatz 5, I-39100 Bozen-Bolzano, Italy; [email protected] * Correspondence: [email protected]; Tel.: +43-660-7426-398 Current address: Department of Biology, IFM, University of Linkoping, Olaus Magnus Vag, y 583 30 Linkoping, Sweden. Equally contributing senior authors. z Received: 29 August 2020; Accepted: 3 October 2020; Published: 5 October 2020 Simple Summary: Wolbachia is an endosymbiotic bacterium that infects numerous insects and crustaceans. Its ability to alter the reproduction of hosts results in incompatibilities of differentially infected individuals. Therefore, Wolbachia has been applied to suppress agricultural and medical insect pests. The European cherry fruit fly, Rhagoletis cerasi, is mainly distributed throughout Europe and Western Asia, and is infected with at least five different Wolbachia strains. The strain wCer2 causes incompatibilities between infected males and uninfected females, making it a potential candidate to control R. cerasi. Thus, the prediction of its spread is of practical importance. Like mitochondria, Wolbachia is inherited from mother to offspring, causing associations between mitochondrial DNA and endosymbiont infection. Misassociations, however, can be the result of imperfect maternal transmission, the loss of Wolbachia, or its horizontal transmission from infected to uninfected individuals. -
Functional Genetic Approaches to Provide Evidence for the Role of Toolkit Genes in the Evolution of Complex Color Patterns in Drosophila Guttifera
Michigan Technological University Digital Commons @ Michigan Tech Dissertations, Master's Theses and Master's Reports 2021 FUNCTIONAL GENETIC APPROACHES TO PROVIDE EVIDENCE FOR THE ROLE OF TOOLKIT GENES IN THE EVOLUTION OF COMPLEX COLOR PATTERNS IN DROSOPHILA GUTTIFERA Mujeeb Olushola Shittu Michigan Technological University, [email protected] Copyright 2021 Mujeeb Olushola Shittu Recommended Citation Shittu, Mujeeb Olushola, "FUNCTIONAL GENETIC APPROACHES TO PROVIDE EVIDENCE FOR THE ROLE OF TOOLKIT GENES IN THE EVOLUTION OF COMPLEX COLOR PATTERNS IN DROSOPHILA GUTTIFERA", Open Access Dissertation, Michigan Technological University, 2021. https://doi.org/10.37099/mtu.dc.etdr/1174 Follow this and additional works at: https://digitalcommons.mtu.edu/etdr Part of the Biology Commons, Developmental Biology Commons, Evolution Commons, Molecular Genetics Commons, and the Other Cell and Developmental Biology Commons FUNCTIONAL GENETIC APPROACHES TO PROVIDE EVIDENCE FOR THE ROLE OF TOOLKIT GENES IN THE EVOLUTION OF COMPLEX COLOR PATTERNS IN DROSOPHILA GUTTIFERA By Mujeeb Olushola Shittu A DISSERTATION Submitted in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY In Biochemistry and Molecular Biology MICHIGAN TECHNOLOGICAL UNIVERSITY 2021 ©2021 Mujeeb Olushola Shittu This dissertation has been approved in partial fulfillment of the requirements for the Degree of DOCTOR OF PHILOSOPHY in Biochemistry and Molecular Biology. Department of Biological Sciences Dissertation Advisor: Dr. Thomas Werner Committee Member: Dr. Chandrashekhar -
Research Techniques in Animal Ecology
Research Techniques in Animal Ecology Methods and Cases in Conservation Science Mary C. Pearl, Editor Methods and Cases in Conservation Science Tropical Deforestation: Small Farmers and Land Clearing in the Ecuadorian Amazon Thomas K. Rudel and Bruce Horowitz Bison: Mating and Conservation in Small Populations Joel Berger and Carol Cunningham, Population Management for Survival and Recovery: Analytical Methods and Strategies in Small Population Conservation Jonathan D. Ballou, Michael Gilpin, and Thomas J. Foose, Conserving Wildlife: International Education and Communication Approaches Susan K. Jacobson Remote Sensing Imagery for Natural Resources Management: A First Time User’s Guide David S. Wilkie and John T. Finn At the End of the Rainbow? Gold, Land, and People in the Brazilian Amazon Gordon MacMillan Perspectives in Biological Diversity Series Conserving Natural Value Holmes Rolston III Series Editor, Mary C. Pearl Series Advisers, Christine Padoch and Douglas Daly Research Techniques in Animal Ecology Controversies and Consequences Luigi Boitani and Todd K. Fuller Editors C COLUMBIA UNIVERSITY PRESS NEW YORK Columbia University Press Publishers Since 1893 New York Chichester, West Sussex Copyright © 2000 by Columbia University Press All rights reserved Library of Congress Cataloging-in-Publication Data Research techniques in animal ecology : controversies and consequences / Luigi Boitani and Todd K. Fuller, editors. p. cm. — (Methods and cases in conservation science) Includes bibliographical references (p. ). ISBN 0–231–11340–4 (cloth : alk. paper)—ISBN 0–231–11341–2 (paper : alk. paper) 1. Animal ecology—Research—Methodology. I. Boitani, Luigi. II. Fuller, T. K. III. Series. QH541.2.R47 2000 591.7′07′2—dc21 99–052230 ϱ Casebound editions of Columbia University Press books are printed on permanent and durable acid-free paper. -
Metazoan Ribosome Inactivating Protein Encoding Genes Acquired by Horizontal Gene Transfer Received: 30 September 2016 Walter J
www.nature.com/scientificreports OPEN Metazoan Ribosome Inactivating Protein encoding genes acquired by Horizontal Gene Transfer Received: 30 September 2016 Walter J. Lapadula1, Paula L. Marcet2, María L. Mascotti1, M. Virginia Sanchez-Puerta3 & Accepted: 5 April 2017 Maximiliano Juri Ayub1 Published: xx xx xxxx Ribosome inactivating proteins (RIPs) are RNA N-glycosidases that depurinate a specific adenine residue in the conserved sarcin/ricin loop of 28S rRNA. These enzymes are widely distributed among plants and their presence has also been confirmed in several bacterial species. Recently, we reported for the first timein silico evidence of RIP encoding genes in metazoans, in two closely related species of insects: Aedes aegypti and Culex quinquefasciatus. Here, we have experimentally confirmed the presence of these genes in mosquitoes and attempted to unveil their evolutionary history. A detailed study was conducted, including evaluation of taxonomic distribution, phylogenetic inferences and microsynteny analyses, indicating that mosquito RIP genes derived from a single Horizontal Gene Transfer (HGT) event, probably from a cyanobacterial donor species. Moreover, evolutionary analyses show that, after the HGT event, these genes evolved under purifying selection, strongly suggesting they play functional roles in these organisms. Ribosome inactivating proteins (RIPs, EC 3.2.2.22) irreversibly modify ribosomes through the depurination of an adenine residue in the conserved alpha-sarcin/ricin loop of 28S rRNA1–4. This modification prevents the binding of elongation factor 2 to the ribosome, arresting protein synthesis5, 6. The occurrence of RIP genes has been exper- imentally confirmed in a wide range of plant taxa, as well as in several species of Gram positive and Gram negative bacteria7–9. -
No Resistance to Male-Killing Wolbachia After Thousands of Years of Infection
doi: 10.1111/j.1420-9101.2008.01607.x No resistance to male-killing Wolbachia after thousands of years of infection J. JAENIKE* & K. A. DYER *Department of Biology, University of Rochester, Rochester, NY, USA Department of Genetics; University of Georgia, Athens, GA, USA Keywords: Abstract coalescence; Maternally transmitted male-killing endosymbionts can exert strong and Drosophila innubila; relentless selection pressure on their hosts to evolve resistance to these endosymbionts; infections. Surveys of current infection prevalence and mtDNA diversity genetic variation; indicate that Drosophila innubila is and has been infected with male-killing natural selection; Wolbachia at moderate frequencies for extended evolutionary periods. Here, response to selection. we use coalescent simulations to infer the minimum age of the Wolbachia infection in this species, and estimate that the infection is at least 15 000 and perhaps over 700 000 years old. We also surveyed this species for genetic variation for resistance to the male-killing effects of infection. Our surveys revealed no evidence for any resistance polymorphism, such that all flies are completely susceptible to male killing. Given the general assumption that Drosophila can be selected for anything, the lack of resistance, despite thousands of years of strong selection, is an apparent evolutionary conun- drum. We hypothesize that resistance requires a mutation of major effect that acts early in development, and that the adverse pleiotropic consequences of such mutations in both infected and uninfected individuals may exceed the possible benefit to infected flies. infected males and uninfected females (Caspari & Wat- Introduction son, 1959). However, once CI-causing Wolbachia reach a The endosymbiotic bacterium Wolbachia may infect half high equilibrium prevalence of infection, there is little or more of all species of insects, spreading and persisting subsequent Wolbachia-induced mortality. -
Abdominal Pigmentation Variation in Drosophila Polymorpha: Geographic Variation in the Trait, and Underlying Phylogeography
University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln Faculty Publications in the Biological Sciences Papers in the Biological Sciences 2005 Abdominal Pigmentation Variation in Drosophila polymorpha: Geographic Variation in the Trait, and Underlying Phylogeography Jennifer A. Brisson University of Nebraska-Lincoln, [email protected] Daniela Cristina De Toni Universidade Federal De Santa Catarina, Brazil Ian Duncan Washington University in St Louis, [email protected] Alan R. Templeton Washington University in St Louis Follow this and additional works at: https://digitalcommons.unl.edu/bioscifacpub Part of the Life Sciences Commons Brisson, Jennifer A.; De Toni, Daniela Cristina; Duncan, Ian; and Templeton, Alan R., "Abdominal Pigmentation Variation in Drosophila polymorpha: Geographic Variation in the Trait, and Underlying Phylogeography" (2005). Faculty Publications in the Biological Sciences. 79. https://digitalcommons.unl.edu/bioscifacpub/79 This Article is brought to you for free and open access by the Papers in the Biological Sciences at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in Faculty Publications in the Biological Sciences by an authorized administrator of DigitalCommons@University of Nebraska - Lincoln. Published in Evolution 59:5 (2005), pp. 1046–1059; doi: 10.1554/04-608 Copyright © 2005 The Society for the Study of Evolution. Used by permission. Submitted October 5, 2004; accepted February 21, 2005. Abdominal Pigmentation Variation in Drosophila polymorpha: Geographic Variation in the Trait, and Underlying Phylogeography Jennifer A. Brisson,1 Daniela Cristina De Toni,2 Ian Duncan,1 and Alan R. Templeton 1 1 Department of Biology, Washington University, St. Louis, Missouri 63130 2 Universidade Federal De Santa Catarina, CCB/BEG, Florianopolis, Santa Catarina, Brazil Present address for J. -
Finnegan Thesis Minus Appendices
The effect of sex-ratio meiotic drive on sex, survival, and size in the Malaysian stalk-eyed fly, Teleopsis dalmanni Sam Ronan Finnegan A dissertation submitted in partial fulfilment of the requirements of the degree of Doctor of Philosophy University College London 26th February 2020 1 I, Sam Ronan Finnegan, confirm that the work presented in this thesis is my own. Where information has been derived from other sources, I confirm that this has been indicated in the thesis. 2 Acknowledgements Thank you first of all to Natural Environment Research Council (NERC) for funding this PhD through the London NERC DTP, and also supporting my work at the NERC Biomolecular Analysis Facility (NBAF) via a grant. Thank you to Deborah Dawson, Gav Horsburgh and Rachel Tucker at the NBAF for all of their help. Thanks also to ASAB and the Genetics Society for funding two summer students who provided valuable assistance and good company during busy experiments. Thank you to them – Leslie Nitsche and Kiran Lee – and also to a number of undergraduate project students who provided considerable support – Nathan White, Harry Kelleher, Dixon Koh, Kiran Lee, and Galvin Ooi. It was a pleasure to work with you all. Thank you also to all of the members of the stalkie lab who have come before me. In particular I would like to thank Lara Meade, who has always been there for help and advice. Special thanks also to Flo Camus for endless aid and assistance when it came to troubleshooting molecular work. Thank you to the past and present members of the Drosophila group – Mark Hill, Filip Ruzicka, Flo Camus, and Michael Jardine. -
A Ribosome-Inactivating Protein in a Drosophila Defensive Symbiont
A ribosome-inactivating protein in a Drosophila defensive symbiont Phineas T. Hamiltona,1, Fangni Pengb, Martin J. Boulangerb, and Steve J. Perlmana,c,1 aDepartment of Biology, University of Victoria, Victoria, BC, Canada V8W 2Y2; bDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, BC, Canada V8P 5C2; and cIntegrated Microbial Biodiversity Program, Canadian Institute for Advanced Research, Toronto, ON, Canada M5G 1Z8 Edited by Nancy A. Moran, University of Texas at Austin, Austin, TX, and approved November 24, 2015 (received for review September 18, 2015) Vertically transmitted symbionts that protect their hosts against the proximate causes of defense are largely unknown, although parasites and pathogens are well known from insects, yet the recent studies have provided some intriguing early insights: A underlying mechanisms of symbiont-mediated defense are largely Pseudomonas symbiont of rove beetles produces a polyketide unclear. A striking example of an ecologically important defensive toxin thought to deter predation by spiders (14), Streptomyces symbiosis involves the woodland fly Drosophila neotestacea, symbionts of beewolves produce antibiotics to protect the host which is protected by the bacterial endosymbiont Spiroplasma from fungal infection (17), and bacteriophages encoding putative when parasitized by the nematode Howardula aoronymphium. toxins are required for Hamiltonella defensa to protect its aphid The benefit of this defense strategy has led to the rapid spread host from parasitic wasps (18), -
The Drosophila Baramicin Polypeptide Gene Protects Against Fungal 2 Infection
bioRxiv preprint doi: https://doi.org/10.1101/2020.11.23.394148; this version posted February 1, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. 1 The Drosophila Baramicin polypeptide gene protects against fungal 2 infection 3 4 M.A. Hanson1*, L.B. Cohen2, A. Marra1, I. Iatsenko1,3, S.A. Wasserman2, and B. 5 Lemaitre1 6 7 1 Global Health Institute, School of Life Science, École Polytechnique Fédérale de 8 Lausanne (EPFL), Lausanne, Switzerland. 9 2 Division of Biological Sciences, University of California San Diego (UCSD), La Jolla, 10 California, United States of America. 11 3 Max Planck Institute for Infection Biology, 10117, Berlin, Germany. 12 * Corresponding author: M.A. Hanson ([email protected]), B. Lemaitre 13 ([email protected]) 14 15 ORCID IDs: 16 Hanson: https://orcid.org/0000-0002-6125-3672 17 Cohen: https://orcid.org/0000-0002-6366-570X 18 Iatsenko: https://orcid.org/0000-0002-9249-8998 19 Wasserman: https://orcid.org/0000-0003-1680-3011 20 Lemaitre: https://orcid.org/0000-0001-7970-1667 21 22 Abstract 23 The fruit fly Drososphila melanogaster combats microBial infection by 24 producing a battery of effector peptides that are secreted into the haemolymph. 25 Technical difficulties prevented the investigation of these short effector genes until 26 the recent advent of the CRISPR/CAS era. As a consequence, many putative immune 27 effectors remain to Be characterized and exactly how each of these effectors 28 contributes to survival is not well characterized. -
Evolution of Gene Regulation Among Drosophila Species
8th Annual ARTHROPOD GENOMICS SYMPOSIUM (AGS) ABSTRACTS | INVITED SPEAKERS EVOLUTION OF GENE REGULATION AMONG DROSOPHILA SPECIES Patricia Wittkopp, University of Michigan Genetic dissection of phenotypic differences within and between species has shown that genetic changes affecting the regulation of gene expression are an important source of phenotypic diversity. We have seen this in our own work investigating the genetic basis of pigmentation differences between closely related Drosophila species. To better understand the genetic mechanisms responsible for the evolution of gene expression, we have been investigating the evolution of a specific gene yellow( ) as well as the evolution of gene expression on a genomic scale. Work on both of these topics, with an emphasis on methods adaptable to non-model systems, will be presented. METAMORPHOSIS AND EVOLUTION OF ARTHROPOD GENOMICS Judith H. Willis, University of Georgia I began work on arthropod genomics 50 years ago. At first, I was only interested in the genetic underpinnings of metamorphic transitions, but I have ended up with an increasing orientation toward arthropod evolution. During those 50 years the field itself has evolved (gaining a name in the process) and metamorphosed (witness this meeting). My talk will address both the biology and the history. I began by testing whether each metamorphic stage was underwritten by a unique set of genes by using cuticular proteins (CPs) as molecular markers. Results, starting with tube gels and progressing to the isolation and characterization of two CP genes and their promoters, demolished that hypothesis. A shift from a giant silkworm to Anopheles gambiae that devotes ~2% of its protein coding genes to structural CPs was accompanied by a larger scale analysis of their activity, including mRNA expression and recovery of authentic CPs from cuticle determined by LC-MS/MS analyses. -
PDF File Includes: 46 Main Text Supporting Information Appendix 47 Figures 1 to 4 Figures S1 to S7 48 Tables 1 to 2 Tables S1 to S2 49 50
UVicSPACE: Research & Learning Repository _____________________________________________________________ Faculty of Science Faculty Publications _____________________________________________________________ This is a post-print version of the following article: Multiple origins of obligate nematode and insect symbionts by a clade of bacteria closely related to plant pathogens Vincent G. Martinson, Ryan M. R. Gawryluk, Brent E. Gowen, Caitlin I. Curtis, John Jaenike, & Steve J. Perlman December 2020 The final publication is available at: https://doi.org/10.1073/pnas.2000860117 Citation for this paper: Martinson, V. G., Gawryluk, R. M. R., Gowen, B. E., Curits, C. I., Jaenike, J., & Perlman, S. J. (2020). Multiple origins of obligate nematode and insect symbionts by a clade of bacteria closely related to plant pathogens. Proceedings of the National Academy of Sciences of the United States of America, 117(50), 31979-31986. https://doi.org/10.1073/pnas.2000860117. 1 Accepted Manuscript: 2 3 Martinson VG, Gawryluk RMR, Gowen BE, Curtis CI, Jaenike J, Perlman SJ. 2020. Multiple 4 origins of oBligate nematode and insect symBionts By a clade of Bacteria closely related to plant 5 pathogens. Proceedings of the National Academy of Sciences, USA. 117, 31979-31986. 6 doi/10.1073/pnas.2000860117 7 8 Main Manuscript for 9 Multiple origins of oBligate nematode and insect symBionts By memBers of 10 a newly characterized Bacterial clade 11 12 13 Authors. 14 Vincent G. Martinson1,2, Ryan M. R. Gawryluk3, Brent E. Gowen3, Caitlin I. Curtis3, John Jaenike1, Steve 15 J. Perlman3 16 1 Department of Biology, University of Rochester, Rochester, NY, USA, 14627 17 2 Department of Biology, University of New Mexico, AlBuquerque, NM, USA, 87131 18 3 Department of Biology, University of Victoria, Victoria, BC, Canada, V8W 3N5 19 20 Corresponding author. -
Metazoan Ribotoxin Genes Acquired by Horizontal Gene Transfer
bioRxiv preprint doi: https://doi.org/10.1101/071340; this version posted August 26, 2016. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Metazoan ribotoxin genes acquired by Horizontal Gene Transfer Walter J. Lapadula1*, Paula L. Marcet2, María L. Mascotti1, María V. Sánchez Puerta3, Maximiliano Juri Ayub1* 1. Instituto Multidisciplinario de Investigaciones Biológicas de San Luis, IMIBIO-SL-CONICET and Facultad de Química, Bioquímica y Farmacia, Universidad Nacional de San Luis, San Luis Argentina. 2. Centers for Disease Control and Prevention, Division of Parasitic Diseases and Malaria, Atlanta, USA. 3. Instituto de Ciencias Básicas, IBAM-CONICET and Facultad de Ciencias Agrarias, Universidad Nacional de Cuyo, Mendoza, Argentina. *Corresponding authors: [email protected], [email protected] 1 bioRxiv preprint doi: https://doi.org/10.1101/071340; this version posted August 26, 2016. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Abstract Ribosome inactivating proteins (RIPs) are RNA N-glycosidases that depurinate a specific adenine residue in the conserved sarcin/ricin loop of 28S rRNA. These enzymes are widely distributed among plants and their presence has also been confirmed in several bacterial species. Recently, we reported for the first time in silico evidence of RIP encoding genes in metazoans, in two closely related species of insects: Aedes aegypti and Culex quinquefasciatus.