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Induction and Specification of Cranial Placodes ⁎ Gerhard Schlosser
Developmental Biology 294 (2006) 303–351 www.elsevier.com/locate/ydbio Review Induction and specification of cranial placodes ⁎ Gerhard Schlosser Brain Research Institute, AG Roth, University of Bremen, FB2, PO Box 330440, 28334 Bremen, Germany Received for publication 6 October 2005; revised 22 December 2005; accepted 23 December 2005 Available online 3 May 2006 Abstract Cranial placodes are specialized regions of the ectoderm, which give rise to various sensory ganglia and contribute to the pituitary gland and sensory organs of the vertebrate head. They include the adenohypophyseal, olfactory, lens, trigeminal, and profundal placodes, a series of epibranchial placodes, an otic placode, and a series of lateral line placodes. After a long period of neglect, recent years have seen a resurgence of interest in placode induction and specification. There is increasing evidence that all placodes despite their different developmental fates originate from a common panplacodal primordium around the neural plate. This common primordium is defined by the expression of transcription factors of the Six1/2, Six4/5, and Eya families, which later continue to be expressed in all placodes and appear to promote generic placodal properties such as proliferation, the capacity for morphogenetic movements, and neuronal differentiation. A large number of other transcription factors are expressed in subdomains of the panplacodal primordium and appear to contribute to the specification of particular subsets of placodes. This review first provides a brief overview of different cranial placodes and then synthesizes evidence for the common origin of all placodes from a panplacodal primordium. The role of various transcription factors for the development of the different placodes is addressed next, and it is discussed how individual placodes may be specified and compartmentalized within the panplacodal primordium. -
Core Transcriptional Regulatory Circuitries in Cancer
Oncogene (2020) 39:6633–6646 https://doi.org/10.1038/s41388-020-01459-w REVIEW ARTICLE Core transcriptional regulatory circuitries in cancer 1 1,2,3 1 2 1,4,5 Ye Chen ● Liang Xu ● Ruby Yu-Tong Lin ● Markus Müschen ● H. Phillip Koeffler Received: 14 June 2020 / Revised: 30 August 2020 / Accepted: 4 September 2020 / Published online: 17 September 2020 © The Author(s) 2020. This article is published with open access Abstract Transcription factors (TFs) coordinate the on-and-off states of gene expression typically in a combinatorial fashion. Studies from embryonic stem cells and other cell types have revealed that a clique of self-regulated core TFs control cell identity and cell state. These core TFs form interconnected feed-forward transcriptional loops to establish and reinforce the cell-type- specific gene-expression program; the ensemble of core TFs and their regulatory loops constitutes core transcriptional regulatory circuitry (CRC). Here, we summarize recent progress in computational reconstitution and biologic exploration of CRCs across various human malignancies, and consolidate the strategy and methodology for CRC discovery. We also discuss the genetic basis and therapeutic vulnerability of CRC, and highlight new frontiers and future efforts for the study of CRC in cancer. Knowledge of CRC in cancer is fundamental to understanding cancer-specific transcriptional addiction, and should provide important insight to both pathobiology and therapeutics. 1234567890();,: 1234567890();,: Introduction genes. Till now, one critical goal in biology remains to understand the composition and hierarchy of transcriptional Transcriptional regulation is one of the fundamental mole- regulatory network in each specified cell type/lineage. -
A Computational Approach for Defining a Signature of Β-Cell Golgi Stress in Diabetes Mellitus
Page 1 of 781 Diabetes A Computational Approach for Defining a Signature of β-Cell Golgi Stress in Diabetes Mellitus Robert N. Bone1,6,7, Olufunmilola Oyebamiji2, Sayali Talware2, Sharmila Selvaraj2, Preethi Krishnan3,6, Farooq Syed1,6,7, Huanmei Wu2, Carmella Evans-Molina 1,3,4,5,6,7,8* Departments of 1Pediatrics, 3Medicine, 4Anatomy, Cell Biology & Physiology, 5Biochemistry & Molecular Biology, the 6Center for Diabetes & Metabolic Diseases, and the 7Herman B. Wells Center for Pediatric Research, Indiana University School of Medicine, Indianapolis, IN 46202; 2Department of BioHealth Informatics, Indiana University-Purdue University Indianapolis, Indianapolis, IN, 46202; 8Roudebush VA Medical Center, Indianapolis, IN 46202. *Corresponding Author(s): Carmella Evans-Molina, MD, PhD ([email protected]) Indiana University School of Medicine, 635 Barnhill Drive, MS 2031A, Indianapolis, IN 46202, Telephone: (317) 274-4145, Fax (317) 274-4107 Running Title: Golgi Stress Response in Diabetes Word Count: 4358 Number of Figures: 6 Keywords: Golgi apparatus stress, Islets, β cell, Type 1 diabetes, Type 2 diabetes 1 Diabetes Publish Ahead of Print, published online August 20, 2020 Diabetes Page 2 of 781 ABSTRACT The Golgi apparatus (GA) is an important site of insulin processing and granule maturation, but whether GA organelle dysfunction and GA stress are present in the diabetic β-cell has not been tested. We utilized an informatics-based approach to develop a transcriptional signature of β-cell GA stress using existing RNA sequencing and microarray datasets generated using human islets from donors with diabetes and islets where type 1(T1D) and type 2 diabetes (T2D) had been modeled ex vivo. To narrow our results to GA-specific genes, we applied a filter set of 1,030 genes accepted as GA associated. -
The Drosophila Eye
Downloaded from genesdev.cshlp.org on October 10, 2021 - Published by Cold Spring Harbor Laboratory Press mirror encodes a novel PBX-class homeoprotein that functions in the definition of the dorsal-ventral border in the Drosophila eye Helen McNeill, 1 Chung-Hui Yang, 1 Michael Brodsky, 2 Josette Ungos, ~ and Michael A. Simon ~'3 1Department of Biological Sciences, Stanford University, Stanford, California 94305 USA; ZDepartment of Biology, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139 USA The Drosophila eye is composed of dorsal and ventral mirror-image fields of opposite chiral forms of ommatidia. The boundary between these fields is known as the equator. We describe a novel gene, mirror (mrr), which is expressed in the dorsal half of the eye and plays a key role in forming the equator. Ectopic equators can be generated by juxtaposing mrr expressing and nonexpressing cells, and the path of the normal equator can be altered by changing the domain of mrr expression. These observations suggest that mrr is a key component in defining the dorsal-ventral boundary of tissue polarity in the eye. In addition, loss of mrr function leads to embryonic lethality and segmental defects, and its expression pattern suggests that it may also act to define segmental borders. Mirror is a member of the class of homeoproteins defined by the human proto-oncogene PBX1. mrr is similar to the Iroquois genes ara and caup and is located adjacent to them in this recently described homeotic cluster. [Key Words: Drosophila; eye development; polarity; compartment; border] Received January 14, 1997; revised version accepted March 4, 1997. -
Semaphorin3a/Neuropilin-1 Signaling Acts As a Molecular Switch Regulating Neural Crest Migration During Cornea Development
Developmental Biology 336 (2009) 257–265 Contents lists available at ScienceDirect Developmental Biology journal homepage: www.elsevier.com/developmentalbiology Semaphorin3A/neuropilin-1 signaling acts as a molecular switch regulating neural crest migration during cornea development Peter Y. Lwigale a,⁎, Marianne Bronner-Fraser b a Department of Biochemistry and Cell Biology, MS 140, Rice University, P.O. Box 1892, Houston, TX 77251, USA b Division of Biology, 139-74, California Institute of Technology, Pasadena, CA 91125, USA article info abstract Article history: Cranial neural crest cells migrate into the periocular region and later contribute to various ocular tissues Received for publication 2 April 2009 including the cornea, ciliary body and iris. After reaching the eye, they initially pause before migrating over Revised 11 September 2009 the lens to form the cornea. Interestingly, removal of the lens leads to premature invasion and abnormal Accepted 6 October 2009 differentiation of the cornea. In exploring the molecular mechanisms underlying this effect, we find that Available online 13 October 2009 semaphorin3A (Sema3A) is expressed in the lens placode and epithelium continuously throughout eye development. Interestingly, neuropilin-1 (Npn-1) is expressed by periocular neural crest but down- Keywords: Semaphorin3A regulated, in a manner independent of the lens, by the subpopulation that migrates into the eye and gives Neuropilin-1 rise to the cornea endothelium and stroma. In contrast, Npn-1 expressing neural crest cells remain in the Neural crest periocular region and contribute to the anterior uvea and ocular blood vessels. Introduction of a peptide that Cornea inhibits Sema3A/Npn-1 signaling results in premature entry of neural crest cells over the lens that Lens phenocopies lens ablation. -
Neural Crest Cells Organize the Eye Via TGF-Β and Canonical Wnt Signalling
ARTICLE Received 18 Oct 2010 | Accepted 9 Mar 2011 | Published 5 Apr 2011 DOI: 10.1038/ncomms1269 Neural crest cells organize the eye via TGF-β and canonical Wnt signalling Timothy Grocott1, Samuel Johnson1, Andrew P. Bailey1,† & Andrea Streit1 In vertebrates, the lens and retina arise from different embryonic tissues raising the question of how they are aligned to form a functional eye. Neural crest cells are crucial for this process: in their absence, ectopic lenses develop far from the retina. Here we show, using the chick as a model system, that neural crest-derived transforming growth factor-βs activate both Smad3 and canonical Wnt signalling in the adjacent ectoderm to position the lens next to the retina. They do so by controlling Pax6 activity: although Smad3 may inhibit Pax6 protein function, its sustained downregulation requires transcriptional repression by Wnt-initiated β-catenin. We propose that the same neural crest-dependent signalling mechanism is used repeatedly to integrate different components of the eye and suggest a general role for the neural crest in coordinating central and peripheral parts of the sensory nervous system. 1 Department of Craniofacial Development, King’s College London, Guy’s Campus, London SE1 9RT, UK. †Present address: NIMR, Developmental Neurobiology, Mill Hill, London NW7 1AA, UK. Correspondence and requests for materials should be addressed to A.S. (email: [email protected]). NatURE COMMUNicatiONS | 2:265 | DOI: 10.1038/ncomms1269 | www.nature.com/naturecommunications © 2011 Macmillan Publishers Limited. All rights reserved. ARTICLE NatUre cOMMUNicatiONS | DOI: 10.1038/ncomms1269 n the vertebrate head, different components of the sensory nerv- ous system develop from different embryonic tissues. -
Early Neuronal and Glial Fate Restriction of Embryonic Neural Stem Cells
The Journal of Neuroscience, March 5, 2008 • 28(10):2551–2562 • 2551 Development/Plasticity/Repair Early Neuronal and Glial Fate Restriction of Embryonic Neural Stem Cells Delphine Delaunay,1,2 Katharina Heydon,1,2 Ana Cumano,3 Markus H. Schwab,4 Jean-Le´on Thomas,1,2 Ueli Suter,5 Klaus-Armin Nave,4 Bernard Zalc,1,2 and Nathalie Spassky1,2 1Inserm, Unite´ 711, 75013 Paris, France, 2Institut Fe´de´ratif de Recherche 70, Faculte´deMe´decine, Universite´ Pierre et Marie Curie, 75013 Paris, France, 3Inserm, Unite´ 668, Institut Pasteur, 75724 Paris Cedex 15, France, 4Max-Planck-Institute of Experimental Medicine, D-37075 Goettingen, Germany, and 5Institute of Cell Biology, Swiss Federal Institute of Technology (ETH), ETH Ho¨nggerberg, CH-8093 Zu¨rich, Switzerland The question of how neurons and glial cells are generated during the development of the CNS has over time led to two alternative models: either neuroepithelial cells are capable of giving rise to neurons first and to glial cells at a later stage (switching model), or they are intrinsically committed to generate one or the other (segregating model). Using the developing diencephalon as a model and by selecting a subpopulation of ventricular cells, we analyzed both in vitro, using clonal analysis, and in vivo, using inducible Cre/loxP fate mapping, the fate of neuroepithelial and radial glial cells generated at different time points during embryonic development. We found that, during neurogenic periods [embryonic day 9.5 (E9.5) to 12.5], proteolipid protein ( plp)-expressing cells were lineage-restricted neuronal precursors, but later in embryogenesis, during gliogenic periods (E13.5 to early postnatal), plp-expressing cells were lineage-restricted glial precursors. -
Hemopoietic Progenitors + Differentiation of Human CD34
The Vitamin D3/Hox-A10 Pathway Supports MafB Function during the Monocyte Differentiation of Human CD34+ Hemopoietic Progenitors This information is current as of September 26, 2021. Claudia Gemelli, Claudia Orlandi, Tommaso Zanocco Marani, Andrea Martello, Tatiana Vignudelli, Francesco Ferrari, Monica Montanari, Sandra Parenti, Anna Testa, Alexis Grande and Sergio Ferrari J Immunol 2008; 181:5660-5672; ; Downloaded from doi: 10.4049/jimmunol.181.8.5660 http://www.jimmunol.org/content/181/8/5660 http://www.jimmunol.org/ References This article cites 70 articles, 23 of which you can access for free at: http://www.jimmunol.org/content/181/8/5660.full#ref-list-1 Why The JI? Submit online. • Rapid Reviews! 30 days* from submission to initial decision • No Triage! Every submission reviewed by practicing scientists by guest on September 26, 2021 • Fast Publication! 4 weeks from acceptance to publication *average Subscription Information about subscribing to The Journal of Immunology is online at: http://jimmunol.org/subscription Permissions Submit copyright permission requests at: http://www.aai.org/About/Publications/JI/copyright.html Email Alerts Receive free email-alerts when new articles cite this article. Sign up at: http://jimmunol.org/alerts The Journal of Immunology is published twice each month by The American Association of Immunologists, Inc., 1451 Rockville Pike, Suite 650, Rockville, MD 20852 Copyright © 2008 by The American Association of Immunologists All rights reserved. Print ISSN: 0022-1767 Online ISSN: 1550-6606. The Journal -
Stages of Embryonic Development of the Zebrafish
DEVELOPMENTAL DYNAMICS 2032553’10 (1995) Stages of Embryonic Development of the Zebrafish CHARLES B. KIMMEL, WILLIAM W. BALLARD, SETH R. KIMMEL, BONNIE ULLMANN, AND THOMAS F. SCHILLING Institute of Neuroscience, University of Oregon, Eugene, Oregon 97403-1254 (C.B.K., S.R.K., B.U., T.F.S.); Department of Biology, Dartmouth College, Hanover, NH 03755 (W.W.B.) ABSTRACT We describe a series of stages for Segmentation Period (10-24 h) 274 development of the embryo of the zebrafish, Danio (Brachydanio) rerio. We define seven broad peri- Pharyngula Period (24-48 h) 285 ods of embryogenesis-the zygote, cleavage, blas- Hatching Period (48-72 h) 298 tula, gastrula, segmentation, pharyngula, and hatching periods. These divisions highlight the Early Larval Period 303 changing spectrum of major developmental pro- Acknowledgments 303 cesses that occur during the first 3 days after fer- tilization, and we review some of what is known Glossary 303 about morphogenesis and other significant events that occur during each of the periods. Stages sub- References 309 divide the periods. Stages are named, not num- INTRODUCTION bered as in most other series, providing for flexi- A staging series is a tool that provides accuracy in bility and continued evolution of the staging series developmental studies. This is because different em- as we learn more about development in this spe- bryos, even together within a single clutch, develop at cies. The stages, and their names, are based on slightly different rates. We have seen asynchrony ap- morphological features, generally readily identi- pearing in the development of zebrafish, Danio fied by examination of the live embryo with the (Brachydanio) rerio, embryos fertilized simultaneously dissecting stereomicroscope. -
New Perspectives on Eye Development and the Evolution of Eyes and Photoreceptors
Journal of Heredity 2005:96(3):171–184 ª 2005 The American Genetic Association doi:10.1093/jhered/esi027 Advance Access publication January 13, 2005 THE WILHEMINE E. KEY 2004 INVITATIONAL LECTURE New Perspectives on Eye Development and the Evolution of Eyes and Photoreceptors W. J. GEHRING From the Department of Cell Biology, Biozentrum, University of Basel, Klingelbergstrasse 70, 4056 Basel, Switzerland Address correspondence to Walter Gehring at the address above, or e-mail: [email protected] Walter J. Gehring is Professor at the Biozentrum of the University of Basel, Switzerland. He obtained his Ph.D. at the University of Zurich in 1965 and after two years as a research assistant of Professor Ernst Hadorn he joined Professor Alan Garen’s group at Yale University in New Haven as a postdoctoral fellow. In 1969 he was appointed as an associate professor at the Yale Medical School and 1972 he returned to Switzerland to become a professor of developmental biology and genetics at the Biozentrum of the University of Basel. He has served as Secretary General of the European Molecular Biology Organization and President of the International Society for Developmental Biologists. He was elected as a Foreign Associate of the US National Academy of Sciences, the Royal Swedish Academy of Science, the Leopoldina, a Foreign Member of the Royal Society of London for Improving Natural Knowledge and the French Acade´mie des Sciences. Walter Gehring has been involved in studies of Drosophila genetics and development, particularly in the analysis of cell determination in the embryo and transdetermination of imaginal discs. -
Drosophila Aurora-A Kinase Inhibits Neuroblast Self-Renewal by Regulating Apkc/Numb Cortical Polarity and Spindle Orientation
Downloaded from genesdev.cshlp.org on September 24, 2021 - Published by Cold Spring Harbor Laboratory Press Drosophila Aurora-A kinase inhibits neuroblast self-renewal by regulating aPKC/Numb cortical polarity and spindle orientation Cheng-Yu Lee,1,3,4 Ryan O. Andersen,1,3 Clemens Cabernard,1 Laurina Manning,1 Khoa D. Tran,1 Marcus J. Lanskey,1 Arash Bashirullah,2 and Chris Q. Doe1,5 1Institutes of Neuroscience and Molecular Biology, Howard Hughes Medical Institute, University of Oregon, Eugene, Oregon 97403, USA; 2Department of Human Genetics, Howard Hughes Medical Institute, University of Utah School of Medicine, Salt Lake City, Utah 84112, USA Regulation of stem cell self-renewal versus differentiation is critical for embryonic development and adult tissue homeostasis. Drosophila larval neuroblasts divide asymmetrically to self-renew, and are a model system for studying stem cell self-renewal. Here we identify three mutations showing increased brain neuroblast numbers that map to the aurora-A gene, which encodes a conserved kinase implicated in human cancer. Clonal analysis and time-lapse imaging in aurora-A mutants show single neuroblasts generate multiple neuroblasts (ectopic self-renewal). This phenotype is due to two independent neuroblast defects: abnormal atypical protein kinase C (aPKC)/Numb cortical polarity and failure to align the mitotic spindle with the cortical polarity axis. numb mutant clones have ectopic neuroblasts, and Numb overexpression partially suppresses aurora-A neuroblast overgrowth (but not spindle misalignment). Conversely, mutations that disrupt spindle alignment but not cortical polarity have increased neuroblasts. We conclude that Aurora-A and Numb are novel inhibitors of neuroblast self-renewal and that spindle orientation regulates neuroblast self-renewal. -
The Mechanism of Lens Placode Formation: a Case of Matrix-Mediated Morphogenesis
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Elsevier - Publisher Connector Developmental Biology 355 (2011) 32–42 Contents lists available at ScienceDirect Developmental Biology journal homepage: www.elsevier.com/developmentalbiology The mechanism of lens placode formation: A case of matrix-mediated morphogenesis Jie Huang a, Ramya Rajagopal a, Ying Liu a, Lisa K. Dattilo a, Ohad Shaham b, Ruth Ashery-Padan b, David C. Beebe a,c,⁎ a Department of Ophthalmology and Visual Sciences, Washington University School of Medicine, Saint Louis, MO, USA b Sackler Faculty of Medicine, Department of Human Molecular Genetics and Biochemistry, Tel Aviv University, Tel Aviv, Israel c Department of Cell Biology and Physiology, Washington University School of Medicine, Saint Louis, MO, USA article info abstract Article history: Although placodes are ubiquitous precursors of tissue invagination, the mechanism of placode formation has Received for publication 19 October 2010 not been established and the requirement of placode formation for subsequent invagination has not been Revised 30 March 2011 tested. Earlier measurements in chicken embryos supported the view that lens placode formation occurs Accepted 13 April 2011 because the extracellular matrix (ECM) between the optic vesicle and the surface ectoderm prevents the Available online 21 April 2011 prospective lens cells from spreading. Continued cell proliferation within this restricted area was proposed to Keywords: cause cell crowding, leading to cell elongation (placode formation). This view suggested that continued cell fi Placode formation proliferation and adhesion to the ECM between the optic vesicle and the surface ectoderm was suf cient to Extracellular matrix explain lens placode formation.