Growth and Development of Aphelenchus Avenae Bastian
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Description of Seinura Italiensis N. Sp.(Tylenchomorpha
JOURNAL OF NEMATOLOGY Article | DOI: 10.21307/jofnem-2020-018 e2020-18 | Vol. 52 Description of Seinura italiensis n. sp. (Tylenchomorpha: Aphelenchoididae) found in the medium soil imported from Italy Jianfeng Gu1,*, Munawar Maria2, 1 3 Lele Liu and Majid Pedram Abstract 1Technical Centre of Ningbo Seinura italiensis n. sp. isolated from the medium soil imported from Customs (Ningbo Inspection and Italy is described and illustrated using morphological and molecular Quarantine Science Technology data. The new species is characterized by having short body (477 Academy), No. 8 Huikang, Ningbo, (407-565) µm and 522 (469-590) µm for males and females, respec- 315100, Zhejiang, P.R. China. tively), three lateral lines, stylet lacking swellings at the base, and ex- 2Laboratory of Plant Nematology, cretory pore at the base or slightly anterior to base of metacorpus; Institute of Biotechnology, College females have 58.8 (51.1-69.3) µm long post-uterine sac (PUS), elon- of Agriculture and Biotechnology, gate conical tail with its anterior half conoid, dorsally convex, and Zhejiang University, Hangzhou, ventrally slightly concave and the posterior half elongated, narrower, 310058, Zhejiang, P.R. China. with finely rounded to pointed tip and males having seven caudal papillae and 14.1 (12.6-15.0) µm long spicules. Morphologically, the 3Department of Plant Pathology, new species is similar to S. caverna, S. chertkovi, S. christiei, S. hyr- Faculty of Agriculture, Tarbiat cania, S. longicaudata, S. persica, S. steineri, and S. tenuicaudata. Modares University, Tehran, Iran. The differences of the new species with aforementioned species are *E-mail: [email protected] discussed. -
Tokorhabditis N. Gen
www.nature.com/scientificreports OPEN Tokorhabditis n. gen. (Rhabditida, Rhabditidae), a comparative nematode model for extremophilic living Natsumi Kanzaki1, Tatsuya Yamashita2, James Siho Lee3, Pei‑Yin Shih4,5, Erik J. Ragsdale6 & Ryoji Shinya2* Life in extreme environments is typically studied as a physiological problem, although the existence of extremophilic animals suggests that developmental and behavioral traits might also be adaptive in such environments. Here, we describe a new species of nematode, Tokorhabditis tufae, n. gen., n. sp., which was discovered from the alkaline, hypersaline, and arsenic‑rich locale of Mono Lake, California. The new species, which ofers a tractable model for studying animal‑specifc adaptations to extremophilic life, shows a combination of unusual reproductive and developmental traits. Like the recently described sister group Auanema, the species has a trioecious mating system comprising males, females, and self‑fertilizing hermaphrodites. Our description of the new genus thus reveals that the origin of this uncommon reproductive mode is even more ancient than previously assumed, and it presents a new comparator for the study of mating‑system transitions. However, unlike Auanema and almost all other known rhabditid nematodes, the new species is obligately live‑bearing, with embryos that grow in utero, suggesting maternal provisioning during development. Finally, our isolation of two additional, molecularly distinct strains of the new genus—specifcally from non‑extreme locales— establishes a comparative system for the study of extremophilic traits in this model. Extremophilic animals ofer a window into how development, sex, and behavior together enable resilience to inhospitable environments. A challenge to studying such animals has been to identify those amenable to labo- ratory investigation1,2. -
PCR-RFLP and Sequencing Analysis of Ribosomal DNA of Bursaphelenchus Nematodes Related to Pine Wilt Disease(L)
Fundam. appl. Nemalol., 1998,21 (6), 655-666 PCR-RFLP and sequencing analysis of ribosomal DNA of Bursaphelenchus nematodes related to pine wilt disease(l) Hideaki IvVAHORI, Kaku TSUDA, Natsumi KANZAKl, Katsura IZUI and Kazuyoshi FUTAI Cmduate School ofAgriculture, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan. Accepted for publication 23 December 1997. Summary -A polymerase chain reaction - restriction fragment polymorphism (PCR-RFLP) analysis was used for the discri mination of isolates of Bursaphelenchus nematode. The isolares of B. xylophilus examined originared from Japan, the United Stares, China, and Canada and the B. mucronatus isolates from Japan, China, and France. Ribosomal DNA containing the 5.8S gene, the internai transcribed spacer region 1 and 2, and partial regions of 18S and 28S gene were amplified by PCR. Digestion of the amplified products of each nematode isolate with twelve restriction endonucleases and examination of resulting RFLP data by cluster analysis revealed a significant gap between B. xylophllus and B. mucronatus. Among the B. xylophilus isolares examined, Japanese pathogenic, Chinese and US isolates were ail identical, whereas Japanese non-pathogenic isolares were slightly distinct and Canadian isolates formed a separate cluster. Among the B. mucronalUS isolates, two Japanese isolares were very similar to each other and another Japanèse and one Chinese isolare were identical to each other. The DNA sequence data revealed 98 differences (nucleotide substitutions or gaps) in 884 bp investigated between B. xylophilus isolare and B. mucronmus isolate; DNA sequence data of Aphelenchus avenae and Aphelenchoides fragariae differed not only from those of Bursaphelenchus nematodes, but also from each other. -
2020.01.27.921304.Full.Pdf
bioRxiv preprint doi: https://doi.org/10.1101/2020.01.27.921304; this version posted January 28, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. 1 A novel metabarcoding strategy for studying nematode 2 communities 3 4 Md. Maniruzzaman Sikder1, 2, Mette Vestergård1, Rumakanta Sapkota3, Tina Kyndt4, 5 Mogens Nicolaisen1* 6 7 1Department of Agroecology, Aarhus University, Slagelse, Denmark 8 2Department of Botany, Jahangirnagar University, Savar, Dhaka, Bangladesh 9 3Department of Environmental Science, Aarhus University, Roskilde, Denmark 10 4Department of Biotechnology, Ghent University, Ghent, Belgium 11 12 13 *Corresponding author 14 Email: [email protected] 15 16 Abstract 17 Nematodes are widely abundant soil metazoa and often referred to as indicators of soil health. 18 While recent advances in next-generation sequencing technologies have accelerated 19 research in microbial ecology, the ecology of nematodes remains poorly elucidated, partly due 20 to the lack of reliable and validated sequencing strategies. Objectives of the present study 21 were (i) to compare commonly used primer sets and to identify the most suitable primer set 22 for metabarcoding of nematodes; (ii) to establish and validate a high-throughput sequencing 23 strategy for nematodes using Illumina paired-end sequencing. In this study, we tested four 1 bioRxiv preprint doi: https://doi.org/10.1101/2020.01.27.921304; this version posted January 28, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. -
Invasive Species Compendium Detailed Coverage of Invasive Species Threatening Livelihoods and the Environment Worldwide
() Invasive Species Compendium Detailed coverage of invasive species threatening livelihoods and the environment worldwide Filter by type Search Datasheet Additional resources (datasheet/additionalresources/6381? scientificName=Aphelenchoides%20fragariae) Aphelenchoides fragariae (strawberry crimp nematode) Toolbox Invasives Open Data (https://ckan.cabi.org/data/) Horizon Scanning Tool (https://www.cabi.org/HorizonScanningTool) Mobile Apps (https://play.google.com/store/apps/dev?id=8227528954463674373&hl=en_GB) Country Pest Alerts (https://www.plantwise.org/KnowledgeBank/pestalert/signup) Datasheet Aphelenchoides fragariae (strawberry crimp nematode) Index Identity (datasheet/6381#toidentity) Taxonomic Tree (datasheet/6381#totaxonomicTree) Notes on Taxonomy and Nomenclature (datasheet/6381#tonotesOnTaxonomyAndNomenclature) Description (datasheet/6381#todescription) Distribution Table (datasheet/6381#todistributionTable) / Risk of Introduction (datasheet/6381#toriskOfIntroduction) Hosts/Species Affected (datasheet/6381#tohostsOrSpeciesAffected) Host Plants and Other Plants Affected (datasheet/6381#tohostPlants) Growth Stages (datasheet/6381#togrowthStages) Symptoms (datasheet/6381#tosymptoms) List of Symptoms/Signs (datasheet/6381#tosymptomsOrSigns) Biology and Ecology (datasheet/6381#tobiologyAndEcology) Natural enemies (datasheet/6381#tonaturalEnemies) Pathway Vectors (datasheet/6381#topathwayVectors) Plant Trade (datasheet/6381#toplantTrade) Impact (datasheet/6381#toimpact) Detection and Inspection (datasheet/6381#todetectionAndInspection) -
Taxonomy and Identification of Principal Foliar Nematode Species (Aphelenchoides and Litylenchus)
plants Review Taxonomy and Identification of Principal Foliar Nematode Species (Aphelenchoides and Litylenchus) Zafar Handoo *, Mihail Kantor and Lynn Carta Mycology and Nematology Genetic Diversity and Biology Laboratory, USDA, ARS, Northeast Area, Beltsville, MD 20705, USA; [email protected] (M.K.); [email protected] (L.C.) * Correspondence: [email protected] Received: 25 September 2020; Accepted: 2 November 2020; Published: 4 November 2020 Abstract: Nematodes are Earth’s most numerous multicellular animals and include species that feed on bacteria, fungi, plants, insects, and animals. Foliar nematodes are mostly pathogens of ornamental crops in greenhouses, nurseries, forest trees, and field crops. Nematode identification has traditionally relied on morphological and anatomical characters using light microscopy and, in some cases, scanning electron microscopy (SEM). This review focuses on morphometrical and brief molecular details and key characteristics of some of the most widely distributed and economically important foliar nematodes that can aid in their identification. Aphelenchoides genus includes some of the most widely distributed nematodes that can cause crop damages and losses to agricultural, horticultural, and forestry crops. Morphological details of the most common species of Aphelenchoides (A. besseyi, A. bicaudatus, A. fragariae, A. ritzemabosi) are given with brief molecular details, including distribution, identification, conclusion, and future directions, as well as an updated list of the nominal species with its synonyms. Litylenchus is a relatively new genus described in 2011 and includes two species and one subspecies. Species included in the Litylenchus are important emerging foliar pathogens parasitizing trees and bushes, especially beech trees in the United States of America. Brief morphological details of all Litylenchus species are provided. -
Supplemental Description of Paraphelenchus Acontioides
Nematology, 2011, Vol. 13(8), 887-899 Supplemental description of Paraphelenchus acontioides (Tylenchida: Aphelenchidae, Paraphelenchinae), with ribosomal DNA trees and a morphometric compendium of female Paraphelenchus ∗ Lynn K. CARTA 1, , Andrea M. SKANTAR 1, Zafar A. HANDOO 1 and Melissa A. BAYNES 2 1 United States Department of Agriculture, ARS-BARC, Nematology Laboratory, Beltsville, MD 20705, USA 2 Department of Forest Ecology and Biogeosciences, University of Idaho, Moscow, ID 83844, USA Received: 30 September 2010; revised: 7 February 2011 Accepted for publication: 7 February 2011; available online: 5 April 2011 Summary – Nematodes were isolated from surface-sterilised stems of cheatgrass, Bromus tectorum (Poaceae), in Colorado, grown on Fusarium (Hypocreaceae) fungus culture, and identified as Paraphelenchus acontioides. Morphometrics and micrographic morphology of this species are given to supplement the original description and expand the comparative species diagnosis. A tabular morphometric compendium of the females of the 23 species of Paraphelenchus is provided as the last diagnostic compilation was in 1984. Variations in the oviduct within the genus are reviewed to evaluate the taxonomic assignment of P. d e cke r i , a morphologically transitional species between Aphelenchus and Paraphelenchus. Sequences were generated for both 18S and 28S ribosomal DNA, representing the first identified species within Paraphelenchus so characterised. These sequences were incorporated into phylogenetic trees with related species of Aphelenchidae and Tylenchidae. Aphelenchus avenae isolates formed a well supported monophyletic sister group to Paraphelenchus. The ecology of Paraphelenchus, cheat grass and Fusarium is also discussed. Keywords – fungivorous nematode, invasive species, key, morphology, molecular, phylogeny, taxonomy. Nematodes of the genus Paraphelenchus Micoletzky, P. -
Expression Profiling and Cross-Species RNA Interference (Rnai) of Desiccation-Induced Transcripts in the Anhydrobiotic Nematode Aphelenchus Avenae
Expression profiling and cross-species RNA interference (RNAi) of desiccation-induced transcripts in the anhydrobiotic nematode Aphelenchus avenae Item Type Journal Article Authors Reardon, Wesley;Chakrabortee, Sohini;Pereira, Tiago C;Tyson, Trevor;Banton, Matthew C;Dolan, Katharine M;Culleton, Bridget A;Wise, Michael J;Burnell, Ann M;Tunnacliffe, Alan Citation BMC Molecular Biology. 2010 Jan 19;11(1):6 Download date 30/09/2021 16:56:04 Link to Item http://dx.doi.org/10.1186/1471-2199-11-6 Find this and similar works at - http://www.lenus.ie/hse Reardon et al. BMC Molecular Biology 2010, 11:6 http://www.biomedcentral.com/1471-2199/11/6 RESEARCH ARTICLE Open Access Expression profiling and cross-species RNA interference (RNAi) of desiccation-induced transcripts in the anhydrobiotic nematode Aphelenchus avenae Wesley Reardon1, Sohini Chakrabortee2†, Tiago Campos Pereira2,3†, Trevor Tyson1†, Matthew C Banton2, Katharine M Dolan1,4, Bridget A Culleton1, Michael J Wise5, Ann M Burnell1*, Alan Tunnacliffe2* Abstract Background: Some organisms can survive extreme desiccation by entering a state of suspended animation known as anhydrobiosis. The free-living mycophagous nematode Aphelenchus avenae can be induced to enter anhydrobiosis by pre-exposure to moderate reductions in relative humidity (RH) prior to extreme desiccation. This preconditioning phase is thought to allow modification of the transcriptome by activation of genes required for desiccation tolerance. Results: To identify such genes, a panel of expressed sequence tags (ESTs) enriched for sequences upregulated in A. avenae during preconditioning was created. A subset of 30 genes with significant matches in databases, together with a number of apparently novel sequences, were chosen for further study. -
Studies on the Morphology and Bio-Ecology of Nematode Fauna of Rewa
STUDIES ON THE MORPHOLOGY AND BIO-ECOLOGY OF NEMATODE FAUNA OF REWA A TMESIS I SUBMITTED FOR THE DEGREE OF DOCTOR OF PHlLOSOPHy IN ZOOLOGY A. P. S. UNIVERSITY. REWA (M. P.) INDIA 1995 MY MANOJ KUMAR SINGH ZOOLOGICAL RESEARCH LAB GOVT. AUTONOMOUS MODEL SCIENCE COLLEGE REWA (M. P.) INDIA La u 4 # s^ ' T5642 - 7 OCT 2002 ^ Dr. C. B. Singh Department of Zoology M Sc, PhD Govt Model Science Coll Professor & Head Rewa(M P ) - 486 001 Ref Date 3^ '^-f^- ^'^ir CERTIFICATE Shri Manoj Kumar Singh, Research Scholar, Department of Zoology, Govt. Model Science College, Rewa has duly completed this thesis entitled "STUDIES ON THE MORPHOLOGY AND BIO-ECOLOGY OF NEMATODE FAUNA OF REWA" under my supervision and guidance He was registered for the degree of Philosophy in Zoology on Jan 11, 1993. Certified that - 1. The thesis embodies the work of the candidate himself 2. The candidate worked under my guidance for the period specified b\ A. P. S. University, Rewa. 3. The work is upto the standard, both from, itscontentsas well as literary presentation point of view. I feel pleasure in commendingthis work to university for the awaid of the degree. (Dr. Co. Singh) or^ra Guide Professor & Head of Zoology department Govt. Model Science College (Autonomous) Rewa (M.P.) DECLARATION The work embodied in this thesis is original and was conducted druing the peirod for Jan. 1993 to July 1995 at the Zoological Research Lab, Govt. Model Science College Rewa, (M.P.) to fulfil the requirement for the degree of Doctor of Philosophy in Zoology from A.P.S. -
FINAL VERSION JUNE 14 2010X
Nematodes from the Bakwena Cave in Irene, South Africa Candice Jansen van Rensburg Academic year: 2009-2010 Thesis submitted in partial fulfillment of the requirements for the award of the degree Master of Science in Nematology in the Faculty of Sciences, Ghent University Promoter: Prof. Wilfrida Decraemer Co-Promoters: Dr. Wim Bert Dr. Antoinette Swart Nematodes from the Bakwena Cave in Irene, South Africa Candice JANSEN VAN RENSBURG 1*,2 1Nematology section, Department of Biology, Faculty of Sciences, Ghent University; K.L. Ledeganckstraat 35, 9000 Ghent, Belgium 2Dept. Zoology & Entomology, P.O. 339, University of the Free State, Bloemfontein, 9300, South Africa; [email protected] *Corresponding e-mail address: [email protected] 1 Summary A survey forming part of the Bakwena cave project was carried out from January 2009 to February 2010 at the Bakwena Cave South Africa. A total of 27 nematode genera belonging to 23 families were collected, 19 genera are reported for the first time from cave environments. Of the six localities sampled, the underground pool of the cave showed the highest species diversity with lowest diversity associated with fresh and dry guano deposits. Four of the sampling localities were dominated by bacterial feeders the remaining two localities being comprised of fungal feeders, obligate and facultative plant feeders and omnivores. Multidimensional scaling indicated six nematode assemblages corresponding with six localities, which might reflect substrate associated patterns. Three species are also described, two being new to science. Diploscapter coronatus is characterised by having a visibly annulated cuticle; a pharyngeal corpus clearly distinguishable from the isthmus, the vulva situated about mid-body and the stoma almost twice as long as the lip region width. -
Han Et Al 2016
ORIGINAL RESEARCH published: 05 January 2016 doi: 10.3389/fnana.2015.00162 Unexpected Variation in Neuroanatomy among Diverse Nematode Species Ziduan Han1, Stephanie Boas1 and Nathan E. Schroeder1,2* 1 Department of Crop Sciences, University of Illinois at Urbana-Champaign, Urbana, IL, USA, 2 Neuroscience Program, University of Illinois at Urbana-Champaign, Urbana, IL, USA Nematodes are considered excellent models for understanding fundamental aspects of neuron function. However, nematodes are less frequently used as models for examining the evolution of nervous systems. While the habitats and behaviors of nematodes are diverse, the neuroanatomy of nematodes is often considered highly conserved. A small number of nematode species greatly influences our understanding of nematode neurobiology. The free-living species Caenorhabditis elegans and, to a lesser extent, the mammalian gastrointestinal parasite Ascaris suum are, historically, the primary sources of knowledge regarding nematode neurobiology. Despite differences in size and habitat, C. elegans and A. suum share a surprisingly similar neuroanatomy. Here, Edited by: we examined species across several clades in the phylum Nematoda and show that Agustín González, there is a surprising degree of neuroanatomical variation both within and among Universidad Complutense de Madrid, Spain nematode clades when compared to C. elegans and Ascaris. We found variation in Reviewed by: the numbers of neurons in the ventral nerve cord and dye-filling pattern of sensory Veronica Martinez Cerdeño, neurons. For example, we found that Pristionchus pacificus, a bacterial feeding species Institute for Pediatric Regenerative Medicine, USA used for comparative developmental research had 20% fewer ventral cord neurons Andrew Chisholm, compared to C. elegans. Steinernema carpocapsae, an insect-parasitic nematode University of California, San Diego, capable of jumping behavior, had 40% more ventral cord neurons than C. -
Bitylenchus Capsicumi Sp.N. and One Known Species of the Genus Aphelenchus from Chilli Plants in Sindh, Pakistan
Int. J. Biol. Res., 2(2): 135-141, 2014. BITYLENCHUS CAPSICUMI SP.N. AND ONE KNOWN SPECIES OF THE GENUS APHELENCHUS FROM CHILLI PLANTS IN SINDH, PAKISTAN SHAHEEN AKHTER* AND BEGUM ZARINA National Nematological Research Centre, University of Karachi, Karachi-75270, Pakistan *Corresponding author e-mail: [email protected] ABSTRACT Bitylenchus capsicumi sp.n. and one known species Aphelenchus isomerus Anderson & Hooper, 1980 (Ebsary, 1991) isolated from chilli plants cultivated in Sindh, Pakistan are described and illustrated here. Bitylenchus capsicumi sp.n., is a bisexual species characterized by rounded, offset lip region with 5-6 annuli, Lateral field with 4 incisures, outer two crenate, not aerolated and inner two smooth, tail clavate bearing 32-45 annuli with smooth terminus and long post uterine sac 83.52-89.34 % of the tail length. Bitylenchus capcicumi sp.n., comes close to Bitylenchus vulgaris, B. usmanensis, B. cuticaudatus and B. mediocris on many of the morphological characters. The morphometric data and illustration of Aphelenchus isomerus Anderson & Hooper, 1980 (Ebsary, 1991) is given. This species is reported for the first time from Sindh, Pakistan. KEYWORDS: Chilli plants, Bitylenchus capsicumi sp.n., Aphelenchus isomerus, Sindh, Pakistan. INTRODUCTION Chilli is originated from the Latin American tropical regions of the South (New Mexico and Guatemala) approximately 7500 BC. Portuguese’s prior to 1585 brought hot chilli from Brazil to Indo-Pak subcontinent. Chilli is a common crop and cultivated all over the world. It is reported that Chilli is raised over an area of 1776 thousand hectares in the world, with a production of 7182 thousand tons.