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Plesiomonas shigelloides S000142446 Serratia plymuthica S000016955 Serratia ficaria S000010445 Serratia entomophila S000015406 Leads to highlighted edge in Supplemental Phylogeny 1 Xenorhabdus hominickii S000735562 0.904 Xenorhabdus poinarii S000413914 0.998 0.868 Xenorhabdus griffiniae S000735553 Proteus myxofaciens S000728630 0.862 S000004373 S000728627 0.990 0.822 Arsenophonus nasoniae S000404964 OTU from Corby-Harris (Unpublished) #seqs-1 GQ988429 OTU from Corby-Harris et al (2007) #seqs-1 DQ980880 0.838 S000001277 S000544654 0.999 Providencia vermicola S000544657 0.980 Isolate from Juneja and Lazzaro (2009)-EU587107 Isolate from Juneja and Lazzaro (2009)-EU587113 0.605 0.928 Isolate from Juneja and Lazzaro (2009)-EU587095 0.588 Isolate from Juneja and Lazzaro (2009)-EU587101 Providencia rustigianii S000544651 0.575 Providencia alcalifaciens S000127327 0.962 OTU XDS 099-#libs(1/0)-#seqs(1/0) OTU XYM 085-#libs(13/4)-#seqs(401/23) 0.620 OTU XDY 021-#libs(1/1)-#seqs(3/1) Providencia heimbachae S000544652 Morganella psychrotolerans S000721631 0.994 Morganella morganii S000721642 OTU ICF 062-#libs(0/1)-#seqs(0/7) Morganella morganii S000129416 0.990 Biostraticola tofi S000901778 0.783 Sodalis glossinidius S000436949 Dickeya dadantii S000570097 0.869 0.907 0.526 Brenneria rubrifaciens S000022162 0.229 Brenneria salicis S000381181 0.806 OTU SEC 066-#libs(0/1)-#seqs(0/1) Brenneria quercina S000005099 0.995 Pragia fontium S000022757 Budvicia aquatica S000020702 Serratia fonticola S000007381 0.153 Serratia liquefaciens S000005219 Serratia grimesii S000020768 Serratia proteamaculans S000012783 0.785 OTU ORM 089-#libs(2/2)-#seqs(22/11) 0.862 Serratia quinivorans S000014683 Obesumbacterium proteus S000019080 0.944 Hafnia alvei S000436518 0.676 OTU from Cox and Gilmore (2007) #seqs-3 MA248 enterocolitica S000392501 0.981 Rahnella aquatilis S000002387 Serratia odorifera S000015029 OTU from Corby-Harris et al (2007) #seqs-2 DQ981070 OTU MIC 054-#libs(0/1)-#seqs(0/2) 0.761 0.866 Leminorella grimontii S000020201 Serratia rubidaea S000381746 S000010448 0.948 0.000 OTU FLV 089-#libs(0/1)-#seqs(0/1) OTU XYX 081-#libs(6/4)-#libs(77/65) Serratia nematodiphila S000903064 0.883 Serratia marcescens S000116423 carotovorum S000008875 Pectobacterium carotovorum S000003542 0.991 Pectobacterium cacticida S000011619 0.938 erythrinae S000390457 0.958 0.870 OTU MOV 060-#libs(0/1)-#seqs(0/1) 0.169 Brenneria nigrifluens S000381175 0.808 Brenneria alni S000009236 Serratia ureilytica S000531179 OTU ICF 070-#libs(0/1)-#seqs(0/1) 0.000 Enterobacter gergoviae S000381743 OTU from Cox and Gilmore (2007) #seqs-59 OU51 0.700 OTU from Corby-Harris et al (2007) #seqs-5 DQ980757 0.921 OTU HPM 143-#libs(0/1)-#seqs(0/1) 0.991 Tatumella ptyseos S000018554 Pantoea citrea S000965399 0.931 Pantoea flectens S000012967 0.243 0.996 OTU IMH 035-#libs(0/3)-#seqs(0/48) OTU ORM 061-#libs(2/0)-#seqs(8/0) S000387361 Enterobacter asburiae S000381739 S000129485 0.961 Enterobacter radicincitans S000503537 Salmonella S000358338 0.831 Enterobacter cowanii S000114246 Cronobacter dublinensis S000842719 Cronobacter dublinensis S000842668 0.940 0.940 0.748 0.983 Cronobacter dublinensis S000842665 0.760 Cronobacter malonaticus S000842708 1.000 0.953 Cronobacter sakazakii S000770209 Cronobacter turicensis S000842718 0.731 Cronobacter muytjensii S000842672 S000427858 0.805 0.699 Escherichia dysenteriae S000000258 0.997 Escherichia Shigella fergusonii S000139289 0.931 0.502 OTU CAN 007-#libs(2/3)-#seqs(40/114) 0.942 Escherichia Shigella coli S000004313 Trabulsiella guamensis S000358339 0.857 0.742 Edwardsiella ictaluri S000007645 1.000 Edwardsiella tarda S000004636 Edwardsiella hoshinae S000009145 Enterobacter pulveris S000622205 0.929 OTU from Cox and Gilmore (2007) #seqs-2 MA125 Klebsiella singaporensis S000458520 Enterobacter cloacae S000021184 Pantoea stewartii S000381179 0.930 0.991 Pantoea ananatis S000381168 OTU from Cox and Gilmore (2007) #seqs-1 MA241 0.790 0.901 OTU SCA 202-#libs(0/1)-#seqs(0/4) Pantoea agglomerans S000016079 Erwinia tracheiphila S000007314 0.977 0.955 Erwinia psidii S000128851 0.761 OTU ELD 039-#libs(0/2)-#seqs(0/34) Pantoea dispersa S000691510 Pectobacterium cypripedii S000000125 OTU from Corby-Harris et al (2007) #seqs-1 DQ980763 0.298 0.998 OTU FLV 010-#libs(0/4)-#seqs(0/22) 0.775 0.473 Erwinia pyrifoliae S000769657 0.525 Erwinia amylovora S000021308 0.840 Erwinia tasmaniensis S000629150 Erwinia rhapontici S000015345 0.279 Erwinia persicina S000381176 OTU from Corby-Harris et al (2007) #seqs-1 DQ980779 OTU FLV 077-#libs(0/1)-#seqs(0/1) OTU from Cox and Gilmore (2007) #seqs-3 MA9 OTU from Cox and Gilmore (2007) #seqs-5 MA25 OTU from Cox and Gilmore (2007) #seqs-1 MA218 S000387414 Klebsiella pneumoniae S000021704 OTU MOV 063-#libs(1/1)-#seqs(1/1) Klebsiella pneumoniae S000003514 OTU from Cox and Gilmore (2007)-MA229 - 45 0.878 Klebsiella variicola S000324392 Enterobacter aerogenes S000381745 Kluyvera intermedia S000015063 0.391 Kluyvera georgiana S000470254 0.996 Kluyvera ascorbata S000022462 0.883 Kluyvera cryocrescens S000000149 Raoultella terrigena S000010034 Raoultella planticola S000387364 Raoultella ornithinolytica S000438477 Enterobacter kobei S000113887 OTU FNS 026-#libs(0/2)-#seqs(0/3) 0.996 Citrobacter gillenii S000427773 Citrobacter braakii S000427774 Enterobacter amnigenus S000381744 0.710 Enterobacter nimipressuralis S000128849 Buttiauxella izardii S000022751