Analysis of Various Techniques for Knowledge Mining in Electronic Health Records
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Tackling the Beast Using GNU Health to Help Governments in the Fight
Tackling the Beast Tackling the beast Using GNU Health to help governments in the fight against the COVID-19 pandemic Dr. Luis Falcon, MD, MSc [email protected] Flatten the Curve Summit April 21st, 2020 Dr. Luis Falcon, M.D. Freedom and Equity in Healthcare GNU Health is, first and foremost, a Social Project ...with really cool technology Flatten the Curve Summit April 21st, 2020 Dr. Luis Falcon, M.D. From GNU Solidario Group pic from GNUHealthCon 2018 in Canary Islands Flatten the Curve Summit April 21st, 2020 Dr. Luis Falcon, M.D. Official GNU Package Official GNU Package, from the Free Software Foundation Open Documentation Relies on free technolog! Friendly communit! Flatten the Curve Summit April 21st, 2020 Dr. Luis Falcon, M.D. GNU Health Ecosystem Flatten the Curve Summit April 21st, 2020 Dr. Luis Falcon, M.D. GNU Health ecosystem Flatten the Curve Summit April 21st, 2020 Dr. Luis Falcon, M.D. Projects from the GNU Health ecosystem Flatten the Curve Summit April 21st, 2020 Dr. Luis Falcon, M.D. GNU Health snapshots Flatten the Curve Summit April 21st, 2020 Dr. Luis Falcon, M.D. ... GNU Health + Orthanc Flatten the Curve Summit April 21st, 2020 Dr. Luis Falcon, M.D. ... GNU Health Federation in Cancer research Flatten the Curve Summit April 21st, 2020 Dr. Luis Falcon, M.D. GNU Health is about Social Medicine: People before Patients Flatten the Curve Summit April 21st, 2020 Dr. Luis Falcon, M.D. Health is a Fundamental Human Right “No one should get sick and die just because they are poor, or because they cannot access the health services they need.” World Health Organization The right to health for all people means that everyone should have access to the health services they need, when and where they need them, without suffering financial hardship. -
Free/Libre Open Source Software (FLOSS) in Healthcare: Showcase of OSCAR, a Canadian Project
Free/Libre Open Source Software (FLOSS) in Healthcare: Showcase of OSCAR, A Canadian Project David Chan, MD, CCFP, MSc, FCFP Associate Professor Department of Family Medicine McMaster University, Hamilton, Ontario, Canada 1 QNUCM Nov 12, 2006 11/12/06 PPresentationresentation outlineoutline What is Free/Libre Open Source Software (FLOSS) What is OSCAR A Quick Tour Question & Answer 2 QNUCM Nov 12, 2006 11/12/06 ResourcesResources http://oscarmcmaster.org (please join) The Cathedral and the Bazaar (Eric Raymond) Open Sources: Voices from the Open Source Revolution (O’Reilly publisher) The Success of Open Source (Steven Weber) The Future of Ideas: the Fate of the Commons in a Connected World (Lawrence Lessig) http://en.wikipedia.org/wiki/Open_source 3 QNUCM Nov 12, 2006 11/12/06 4 QNUCM Nov 12, 2006 11/12/06 5 QNUCM Nov 12, 2006 11/12/06 6 QNUCM Nov 12, 2006 11/12/06 7 QNUCM Nov 12, 2006 11/12/06 WWhhaatt isis F FLLOOSSSS?? Source code versus machine code 8 QNUCM Nov 12, 2006 11/12/06 9 QNUCM Nov 12, 2006 11/12/06 10 QNUCM Nov 12, 2006 11/12/06 WWhhaatt isis F FLLOOSSSS?? Source code versus machine code Free as in “libre” not “gratis” (“freedom” not “free beer”) – freedom from single vendor lock-in – freedom from proprietary “non-standards” – freedom from DEATH (average life-span of most vendors)! – freedom to adapt to CHANGE: health care environment (e.g. Primary Care Reform) technology (e.g. hardware, software, and the Internet) standards (e.g. Infoway 2009: HL7, LOINC, SNOWMED-CT) new knowledge (e.g. -
Step-By-Step Install Guide OSCAR Mcmaster Ehealth CMS on Ubuntu
Global Open Versity eHealth Labs Install Guide OSCAR McMaster CMS on Linux Ubuntu 10.04 LTS v1.5 Global Open Versity e-Health Management Systems Hands-on Labs Training Manual Step-by-Step Install Guide OSCAR McMaster CMS on Linux Ubuntu 10.04 LTS (Lucid Lynx) Kefa Rabah Global Open Versity, Vancouver Canada [email protected] www.globalopenversity.org Table of Contents Page No. STEP-BY-STEP INSTALL GUIDE OSCAR MCMASTER CMS ON LINUX UBUNTU 10.04 LTS 3 1.0 Introduction 3 Part 1: Install & Configure Linux Ubuntu 10.04 LTS Desktop 4 Step 1: Getting Started & Hardware Pre-requisites 4 Step 2: Install Linux Ubuntu 10.04 LTS 4 Step 3: Update Ubuntu 10.04 Operating Systems 4 Part 2: Installing OSCAR McMaster CMS on Linux Ubuntu 8.04 LTS Server 5 Step 1: Preamble 5 Part 3: Installing the Infrastructure Packages 6 Step 1: Install OpenSSH Package 6 Step 2: Install Sun-Java6-JDK Package 7 Step 3: Install Ant Package 8 Step 4: Install MySQL Database Server Package 8 Step 5: Install Apache Tomcat 6 Package 9 Step 6: Install Pretty Good Privacy (PGP) Package 9 Step 7: Install CVS 10 Step 8: Install PostgreSQL database server 10 Step 9: Install UNZIP Package 10 Step 10: Install Network Time Protocol (NTP) Service 11 Step 11: Reboot the server 11 Step 12: Configuring the Base Packages 11 Step 13: Configuring Tomcat6 12 Step 14: Secure Apache Tomcat6 using SSL 13 Part 5: Install OSCAR CMS Server 15 Step 1: Download & Install OSCAR 15 Step 2: Create OSCAR Database on MySQL 16 Part 6: Enabling New eCharts 18 Step 1: Enable eChart 18 Part 7: Drugref2/3 -
Comparison of Open-Source Electronic Health Record Systems Based on Functional and User Performance Criteria
Original Article Healthc Inform Res. 2019 April;25(2):89-98. https://doi.org/10.4258/hir.2019.25.2.89 pISSN 2093-3681 • eISSN 2093-369X Comparison of Open-Source Electronic Health Record Systems Based on Functional and User Performance Criteria Saptarshi Purkayastha1, Roshini Allam1, Pallavi Maity1, Judy W. Gichoya2 1Department of BioHealth Informatics, Indiana University–Purdue University Indianapolis, Indianapolis, IN, USA 2Dotter Institute, Oregon Health and Science University, Portland, OR, USA Objectives: Open-source Electronic Health Record (EHR) systems have gained importance. The main aim of our research is to guide organizational choice by comparing the features, functionality, and user-facing system performance of the five most popular open-source EHR systems. Methods: We performed qualitative content analysis with a directed approach on recently published literature (2012–2017) to develop an integrated set of criteria to compare the EHR systems. The functional criteria are an integration of the literature, meaningful use criteria, and the Institute of Medicine’s functional requirements of EHR, whereas the user-facing system performance is based on the time required to perform basic tasks within the EHR system. Results: Based on the Alexa web ranking and Google Trends, the five most popular EHR systems at the time of our study were OSHERA VistA, GNU Health, the Open Medical Record System (OpenMRS), Open Electronic Medical Record (OpenEMR), and OpenEHR. We also found the trends in popularity of the EHR systems and the locations where they were more popular than others. OpenEMR met all the 32 functional criteria, OSHERA VistA met 28, OpenMRS met 12 fully and 11 partially, OpenEHR-based EHR met 10 fully and 3 partially, and GNU Health met the least with only 10 criteria fully and 2 partially. -
Step-By-Step Install Guide OSCAR Mcmaster CMS on Linux Ubuntu 10.04 LTS (Lucid Lynx)
Global Open Versity eHealth Labs Install Guide OSCAR McMaster CMS on Linux Ubuntu 10.04 LTS v1.5 Global Open Versity e-Health Management Systems Hands-on Labs Training Manual Step-by-Step Install Guide OSCAR McMaster CMS on Linux Ubuntu 10.04 LTS (Lucid Lynx) Kefa Rabah Global Open Versity, Vancouver Canada [email protected] www.globalopenversity.org Table of Contents Page No. STEP-BY-STEP INSTALL GUIDE OSCAR MCMASTER CMS ON LINUX UBUNTU 10.04 LTS 3 1.0 Introduction 3 Part 1: Install & Configure Linux Ubuntu 10.04 LTS Desktop 4 Step 1: Getting Started & Hardware Pre-requisites 4 Step 2: Install Linux Ubuntu 10.04 LTS 4 Step 3: Update Ubuntu 10.04 Operating Systems 4 Part 2: Installing OSCAR McMaster CMS on Linux Ubuntu 8.04 LTS Server 5 Step 1: Preamble 5 Part 3: Installing the Infrastructure Packages 6 Step 1: Install OpenSSH Package 6 Step 2: Install Sun-Java6-JDK Package 7 Step 3: Install Ant Package 8 Step 4: Install MySQL Database Server Package 8 Step 5: Install Apache Tomcat 6 Package 9 Step 6: Install Pretty Good Privacy (PGP) Package 9 Step 7: Install CVS 10 Step 8: Install PostgreSQL database server 10 Step 9: Install UNZIP Package 10 Step 10: Install Network Time Protocol (NTP) Service 11 Step 11: Reboot the server 11 Step 12: Configuring the Base Packages 11 Step 13: Configuring Tomcat6 12 Step 14: Secure Apache Tomcat6 using SSL 13 Part 5: Install OSCAR CMS Server 15 Step 1: Download & Install OSCAR 15 Step 2: Create OSCAR Database on MySQL 16 Part 6: Enabling New eCharts 18 Step 1: Enable eChart 18 Part 7: Drugref2/3 -
Bafia District Hospital (Cameroon) Electronic Medical Record (EMR) GNU Health Deployment
Bafia District Hospital (Cameroon) Electronic Medical Record (EMR) GNU Health Deployment EMILIEN FOUDA Agenda 01 Background 02 Objectives 03 EMR Implementation Steps 04 Data Analysis end (Feb-April 2018) 05 The impact of GNU Health in the improvment of Health Situation at Bafia District Hospital 03/12/2018 EMR Deployment in Bafia District Hospital in Cameroon 2 Background CAMEROON IS A COUNTRY IN CENTRAL AFRICA SURFACE AREA : 475 650 KM² REGIONS: TEN (10) NUMBER OF DEPARTMENTS : 58 NUMBER OF LOCAL COUNCILS 360 NUMBER OF DISTRICT HOSPITAL FUNCTIONNAL: 201 TOTAL POPULATION (2018): 24 863 337 habitants. 03/12/2018 | Title of the presentation 3 Background Bafia District Hospital (HDB) is located in the center region of Cameroon, precisely in the Mbam- Inoubou division where is the major health facility (reference hospital) and covers a population of 200,000; It situated along side the road linking Yaounde to Bafoussam which are two main cities. The Yaounde to Bafoussam road is one of the highly accidental in the country, and most of the time people injured are transferred to Bafia District Hospital. 03/12/2018 | Title of the presentation 4 Background The Bafia District Hospital covers a population of 164 000 inhabitants including 19 other health center. This center receives outpatient 1200 to 1500 per month. The capacity of in patients is 186 beds. 03/12/2018 | Title of the presentation 5 Background HUMAN RESOURCES The Bafia District Hospital have 18 services with 186 beds. The Hospital has 118 staff in all categories (60 medical and health -
Open Source Et Gestion De L'information Médicale : Aperçu Des Projets Existants
Open source et gestion de l'information médicale : aperçu des projets existants Ateliers CISP Club 2011 – Alexandre BRULET Open Source : bref historique... 1969 : UNIX (Bell Labs°) 1975 : distribué à des universités pour « fins éducatives » avec les codes sources... 1977 : projet BSD 1984 : projet GNU (R. Stallman) (sources partagées) 1985 : Free Software Fondation (cadre légal – licence GPL) 1989 : licence BSD modifiée (open source) 1991 : noyau GNU/Linux ? OS dérivés (NetBSD, FreeBSD, SunOS ...) 1993 : Slackware 1993 : Debian 1994 : Red Hat > 50 OS dérivés > 100 OS dérivés 1998 : MPL (ex : SUSE) > 50 OS dérivés (Knopix, Ubuntu...) (Mandriva, Fedora ...) 1999 : licence Apache UNESCO 2004 : logiciels libres patrimoine de l'humanité (…) > 35 licences libres recensées sur wikipédia (PHP, Cecil, MIT, CPL, W3C, etc.) Open source : un fonctionnement communautaire ● La « pyramide » Linux : développeurs / 'maintainers' / chefs de projet sys USB net (...) L. Torvalds / A. Morton ● Système de «patchs» : publics, signés, discutés, soumis, (approuvés) ● Versions stables régulières et archivées (mirroirs) ● Système de «paquets» permettant la cohérence des OS ● Mode de fonctionnement repris par la plupart des distributions basées sur Linux ainsi que leurs « filles » : Debian → Ubuntu, Slackware → Zenwalk, RedHat → Fedora, etc. ● Idem pour les logiciels (xfce/gnome/kde, OOo, Gimp, Firefox, etc.) Le monde open source : un immense agrégat de communautés... OS OS OS Projets GNU OS OS OS Noyau OS OS OS Noyau OS OS Projets BSD Programme open source Programme propriétaire Système OS d'exploitation Quid des logiciels médicaux ? Petit tour du monde de l'open source médical à partir d'une liste proposée par Wikipédia. 1. Logiciels médicaux francophones : MedinTux ● Petite communauté depuis 2005 (marseille), licence CeCiLL ● DMI cabinet / hôpital - objectif = ergonomie ● Programmes serveurs et clients, consultation web possible. -
Comprar, Construir O Adaptar. ¿Cómo Decidir? Una Guía Para La Historia Clínica Electrónica Compartida
ORIENTACIÓN Comprar, construir o adaptar. ¿Cómo decidir? Una guía para la historia clínica electrónica compartida (EHR) de código abierto Autores: Joaquin Blaya y Daniel Otzoy Coordinación: Luis Tejerina y Jennifer Nelson Diseño: www.souvenirme.com *Joaquin Blaya es parte del Consejo Directivo de OpenMRS, pero no tiene intereses financieros en OpenMRS ni con ninguno de los sistemas descritos en este reporte. Copyright © 2019 Banco Interamericano de Desarrollo. Esta obra se en- cuentra sujeta a una licencia Creative Commons IGO 3.0 Reconocimien- to-NoComercial-SinObrasDerivadas (CC-IGO 3.0 BY-NC-ND) (http:// cre- ativecommons.org/licenses/by-nc-nd/3.0/igo/legalcode) y puede ser reproducida para cualquier uso no- comercial otorgando el reconocimien- to respectivo al BID. No se permiten obras derivadas. Cualquier disputa relacionada con el uso de las obras del BID que no pue- da resolverse amistosamente se someterá a arbitraje de conformidad con las reglas de la CNUDMI (UNCITRAL). El uso del nombre del BID para cualquier fin distinto al reconocimiento respectivo y el uso del logotipo del BID, no están autorizados por esta licencia CC-IGO y requieren de un acuerdo de licencia adicional. Note que el enlace URL incluye términos y condiciones adicionales de esta licencia. Las opiniones expresadas en esta publicación son de los autores y no ne- cesariamente reflejan el punto de vista del Banco Interamericano de Desa- rrollo, de su Directorio Ejecutivo ni de los países que representa. Comprar, construir o adaptar. ¿Cómo decidir? Una guía para -
Adopting an Open Source Hospital Information System to Manage Healthcare Institutions
LIFE: International Journal of Health and Life-Sciences ISSN 2454-5872 Bouidi et al., 2017 Volume 3 Issue 3, pp. 38-57 Date of Publication: 18th December 2017 DOI-https://dx.doi.org/10.20319/lijhls.2017.33.3857 This paper can be cited as: Bouidi, Y, Azzouzi Idrissi, M & Rais, N. (2017). Adopting an Open Source Hospital Information System to Manage Healthcare Institutions. LIFE: International Journal of Health and Life-Sciences, 3(3), 38-57. This work is licensed under the Creative Commons Attribution-Non Commercial 4.0 International License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc/4.0/ or send a letter to Creative Commons, PO Box 1866, Mountain View, CA 94042, USA. ADOPTING AN OPEN SOURCE HOSPITAL INFORMATION SYSTEM TO MANAGE HEALTHCARE INSTITUTIONS Youssef Bouidi Laboratory of Informatics, Modeling and Systems (LIMS), University of Sidi Mohamed Ben Abdallah (USMBA), Fez, Morocco [email protected] Mostafa Azzouzi Idrissi Laboratory of Informatics, Modeling and Systems (LIMS), University of Sidi Mohamed Ben Abdallah (USMBA), Fez, Morocco [email protected] Noureddine Rais Laboratory of Informatics, Modeling and Systems (LIMS), University of Sidi Mohamed Ben Abdallah (USMBA), Fez, Morocco [email protected] Abstract Our paper is a comparative study of different Open Source Hospital Information Systems (OSHISs). We chose open source because of problems in healthcare management like budget, resources and computerization. A literature review did not allow us to find a similar comparison, which explains the great interest of our study. Firstly, we retrieved nine OSHISs: MediBoard, OpenEMR, OpenMRS, OpenHospital, HospitalOS, PatientOS, Care2x, MedinTux and HOSxP. -
Wsis Forum 2013 Agenda & Programme Brochure
W o r l d S u m m i t o n t h e I n f o r m a t i o n S o c i e t y Strategic Partners AGENDA & PROGRAMME BROCHURE WSIS FORUM 2013 WSIS+10 Visioning Partner AGENDA & PROGRAMME BROCHURE AGENDA Partners for Specic Activities Hosted by: WSIS Forum: Organised by: Printed in Switzerland Geneva, 2013 www.wsis.org/forum WSIS Forum 2013 Programme Brochure WSIS Forum 2013: Outcome Document Disclaimer Please note the WSIS Forum 2013 Programme Brochure is a compilation of session descriptions submitted to the WSIS Secretariat by the organizations responsible for their respective sessions. ITU does not hold any responsibility for the session descriptions provided by the organizers of the sessions for WSIS Forum 2013. © ITU, 2013 International Telecommunication Union (ITU), Geneva 13 May Monday 09:00-10:30 Opening Ceremony (E/F/Passive A) Opening Handing Over of WSIS Project Prizes Ceremony Room 1&2, CICG 10:30-13:00 High-Level Opening Session High-Level Emerging Trends and Innovation in the ICT Ecosystem Opening (E/F/Passive A) Session Room 1&2, CICG 11:00-12:00 UNGIS Substantive Session: WSIS+10 and Post 2015 UNGIS (UNGIS Members only) Room E, ITU 12:15-13:00 Press Conference Press CICG Conference (Media only) WSIS Forum 2013: 13:00 Group Photograph In front of CICG 13:15-14:00 Lunch Break High-Level Lunch (on invitation only) 14:00-14:30 Exhibition Inauguration (Montbrilliant and Tower) Exhibition Coee by Kuwait (Montbrilliant) Inauguration AL C2 AL C9 IS Infrastructure Media WSIS Stocktaking Broadband Backbone Internet Universality: and WSIS Prizes -
GNU Health and Orthanc - the Perfect Companions Dr
GNU Health and Orthanc - The perfect companions Dr. Axel Braun Integrating two great solutions [email protected] DocB on Freenode.net @coogor @docb:matrix.org GNU Health and Orthanc Dr. Axel Braun CC-by-SA 4.0 ‘Standard’ imaging workflow using DICOM Orthanc images by Sebastien Jodogne GNU Health and Orthanc Dr. Axel Braun CC-by-SA 4.0 Image workflow in GNU Health GNU Health and Orthanc Dr. Axel Braun CC-by-SA 4.0 Requesting a new Image GNU Health and Orthanc Dr. Axel Braun CC-by-SA 4.0 Draft Image Request completed GNU Health and Orthanc Dr. Axel Braun CC-by-SA 4.0 Entering the Test Result manually GNU Health and Orthanc Dr. Axel Braun CC-by-SA 4.0 Integrating GNU Health with Orthanc GNU Health and Orthanc Dr. Axel Braun CC-by-SA 4.0 The Challenge: worldwide explosion of med. images CT + MRI + PET-CT Orthanc images by Sebastien Jodogne GNU Health and Orthanc Dr. Axel Braun CC-by-SA 4.0 DICOM is a standard, but…. * The DICOM standard is very complex, both for users and developers * Not every PACS comes with teleradiology (remote expertise) ⇒ need to combine vendors * Many specialized vendors, with costly, proprietary and monolithic ecosystem ⇒ high risk of lock-in, few agility * Interoperability is checked in “Connectathons” where vendors meet (N2 complexity) ⇒ no reference implementation * Few IT expertise in hospitals about imaging ⇒ need to share knowledge Heterogeneous modalities ⇒ very problematic in emerging economies! Orthanc images by Sebastien Jodogne GNU Health and Orthanc Dr. Axel Braun CC-by-SA 4.0 Automation of Imaging Workflow University Hospital of Liège: 300 modalities Orthanc images by Sebastien Jodogne GNU Health and Orthanc Dr. -
Jamaica Support for the Health Systems
CONFIDENTIAL INTERNAL USE PUBLIC UPON APPROVAL DOCUMENT OF THE INTER-AMERICAN DEVELOPMENT BANK JAMAICA SUPPORT FOR THE HEALTH SYSTEMS STRENGTHENING FOR THE PREVENTION AND CARE MANAGEMENT OF NON-COMMUNICABLE DISEASES PROGRAMME II (JA-L1086) LOAN PROPOSAL This document was prepared by the project team consisting of: Ricardo Pérez Cuevas (SPH/CJA) and Pablo Ibarrarán (SCL/SPH) CoTeam- Leaders; Ian Mac Arthur (SPH/CBR); Jennifer Nelson, Isabel Delfs Ilieva, and Sheyla Silveira (SCL/SPH); Rene Herrera, and Naveen Jainauth-Umrao (FMP/CJA); Henry Mooney, Jason Craig Christie, and Nicole Brown (CCB/CJA); Louis Francois- Chrétien (LEG/SGO); and Charles Steven Collins (VPS/ESG). This document contains confidential information relating to one or more of the ten exceptions of the Access to Information Policy and will be initially treated as confidential and made available only to Bank Employees. The document will be discussed and made available to the public upon approval. CONTENTS PROJECT SUMMARY ................................................................................................................... 1 I. PROJECT DESCRIPTION AND RESULTS MONITORING ......................................................... 2 A. Background, problem addressed, and justification .............................................. 2 B. Objective, components, and cost........................................................................ 17 C. Key results indicators .......................................................................................... 20 II.