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Circadian Clock in Cell Culture: II
The Journal of Neuroscience, January 1988, 8(i): 2230 Circadian Clock in Cell Culture: II. /n vitro Photic Entrainment of Melatonin Oscillation from Dissociated Chick Pineal Cells Linda M. Robertson and Joseph S. Takahashi Department of Neurobiology and Physiology, Northwestern University, Evanston, Illinois 60201 The avian pineal gland contains circadian oscillators that regulate the rhythmic synthesisof melatonin (Takahashi et al., regulate the rhythmic synthesis of melatonin. We have de- 1980; Menaker and Wisner, 1983; Takahashi and Menaker, veloped a flow-through cell culture system in order to begin 1984b). Previous work has shown that light exposure in vitro to study the cellular and molecular basis of this vertebrate can modulate N-acetyltransferase activity and melatonin pro- circadian oscillator. Pineal cell cultures express a circadian duction in chick pineal organ cultures (Deguchi, 1979a, 1981; oscillation of melatonin release for at least 5 cycles in con- Wainwright and Wainwright, 1980; Hamm et al., 1983; Taka- stant darkness with a period close to 24 hr. In all circadian hashi and Menaker, 1984b). Although acute exposure to light systems, light regulates the rhythm by the process of en- can suppressmelatonin synthesis, photic entrainment of cir- trainment that involves control of the phase and period of cadian rhythms in the pineal in vitro has not been definitively the circadian oscillator. In chick pineal cell cultures we have demonstrated. Preliminary work hassuggested that entrainment investigated the entraining effects of light in 2 ways: by shift- may occur; however, none of these studies demonstrated that ing the light-dark cycle in vitro and by measuring the phase- the steady-state phase of the oscillator was regulated by light shifting effects of single light pulses. -
Review on Bioluminescence Imaging
DOI: 10.37421/apn.2020.05.170 Review Article Journal of Volume 12:7, 2021 Nuclear Medicine & Radiation Therapy ISSN: 2155-9619 Open Access Review on Bioluminescence Imaging Cleodora Yen* Department of Radiology, Yale University, United States Bioluminescence imaging (BLI) is an innovation created over the previous decade The strategy expects luciferin to be added to the circulatory system, which conveys it that takes into consideration the noninvasive investigation of continuous organic cycles. to cells all through the body. At the point when luciferin arrives at cells that have been As of late, bioluminescence tomography (BLT) has become conceivable and a few adjusted to convey the firefly quality, those cells produce light [2]. frameworks have opened up. In 2011, PerkinElmer gained perhaps the most famous lines of optical imaging frameworks with bioluminescence from Caliper Life Sciences. The BLT opposite issue of 3D remaking of the dispersion of bioluminescent atoms Bioluminescence is the cycle of light outflow in living life forms. Bioluminescence imaging from information estimated on the creature surface is innately poorly presented. The uses local light outflow from one of a few organic entities which bioluminesce. The three main little creature study utilizing BLT was directed by scientists at the University of principle sources are the North American firefly, the ocean pansy (and related marine Southern California, Los Angeles, USA in 2005. Following this turn of events, many organic entities), and microbes like Photorhabdus luminescens and Vibrio fischeri. The exploration bunches in USA and China have fabricated frameworks that empower BLT. DNA encoding the iridescent protein is fused into the lab creature either by means of Mustard plants have had the quality that makes fireflies' tails shine added to them so the a viral vector or by making a transgenic creature. -
A Molecular Perspective of Human Circadian Rhythm Disorders Nicolas Cermakian* , Diane B
Brain Research Reviews 42 (2003) 204–220 www.elsevier.com/locate/brainresrev Review A molecular perspective of human circadian rhythm disorders Nicolas Cermakian* , Diane B. Boivin Douglas Hospital Research Center, McGill University, 6875 LaSalle boulevard, Montreal, Quebec H4H 1R3, Canada Accepted 10 March 2003 Abstract A large number of physiological variables display 24-h or circadian rhythms. Genes dedicated to the generation and regulation of physiological circadian rhythms have now been identified in several species, including humans. These clock genes are involved in transcriptional regulatory feedback loops. The mutation of these genes in animals leads to abnormal rhythms or even to arrhythmicity in constant conditions. In this view, and given the similarities between the circadian system of humans and rodents, it is expected that mutations of clock genes in humans may give rise to health problems, in particular sleep and mood disorders. Here we first review the present knowledge of molecular mechanisms underlying circadian rhythmicity, and we then revisit human circadian rhythm syndromes in light of the molecular data. 2003 Elsevier Science B.V. All rights reserved. Theme: Neural basis of behavior Topic: Biological rhythms and sleep Keywords: Circadian rhythm; Clock gene; Sleep disorder; Suprachiasmatic nucleus Contents 1 . Introduction ............................................................................................................................................................................................ 205 -
Integration of Circadian and Phototransduction Pathways in the Network Controlling CAB Gene Transcription in Arabidopsis
Proc. Natl. Acad. Sci. USA Vol. 93, pp. 15491–15496, December 1996 Plant Biology Integration of circadian and phototransduction pathways in the network controlling CAB gene transcription in Arabidopsis (firefly luciferaseyluminescence imagingycircadian rhythmygene expression) ANDREW J. MILLAR* AND STEVE A. KAY National Science Foundation Center for Biological Timing, Department of Biology, University of Virginia, Charlottesville, VA 22903 Communicated by Winslow Briggs, Carnegie Institute of Washington, Stanford, CA, October 15, 1996 (received for review June 24, 1996) ABSTRACT The transcription of CAB genes, encoding the the circadian clock acts negatively on CAB expression, antag- chlorophyll ayb-binding proteins, is rapidly induced in dark- onizing the positive effects of phototransduction pathways grown Arabidopsis seedlings following a light pulse. The during the subjective night. transient induction is followed by several cycles of a circadian The transient induction of CAB expression immediately rhythm. Seedlings transferred to continuous light are known after plants are exposed to light is referred to as the ‘‘acute’’ to exhibit a robust circadian rhythm of CAB expression. The response to light (9, 11). Many circadian-regulated processes precise waveform of CAB expression in light–dark cycles, exhibit acute effects of light: the expression of clock-controlled however, reflects a regulatory network that integrates infor- genes (ccg)inNeurospora is induced by light (12), for example, mation from photoreceptors, from the circadian clock and and the production of melatonin in cultured avian pinealocytes possibly from a developmental program. We have used the is suppressed (13). Current evidence indicates that the circa- luciferase reporter system to investigate CAB expression with dian oscillator is not required for these acute responses: ccg high time resolution. -
Determining the Depth Limit of Bioluminescent Sources in Scattering Media
bioRxiv preprint doi: https://doi.org/10.1101/2020.04.21.044982; this version posted April 23, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Determining the Depth Limit of Bioluminescent Sources in Scattering Media. Ankit Raghuram1,*, Fan Ye1, Jesse K. Adams1,2, Nathan Shaner3, Jacob T. Robinson1,2,4,5, Ashok Veeraraghavan1,2,6 1 Department of Electrical and Computer Engineering, Rice University, Houston, TX 77005, USA 2 Applied Physics Program, Rice University, Houston, TX 77005, USA 3 Department of Neurosciences, University of California San Diego, La Jolla, CA 92093, USA 4 Department of Neuroscience, Baylor College of Medicine, Houston, TX 77030, USA 5 Department of Bioengineering, Rice University, Houston, TX 77005, USA 6 Department of Computer Science, Rice University, Houston TX 77005, USA * [email protected] Abstract Bioluminescence has several potential advantages compared to fluorescence microscopy for in vivo biological imaging. Because bioluminescence does not require excitation light, imaging can be performed for extended periods of time without phototoxicity or photobleaching, and optical systems can be smaller, simpler, and lighter. Eliminating the need for excitation light may also affect how deeply one can image in scattering biological tissue, but the imaging depth limits for bioluminescence have yet to be reported. Here, we perform a theoretical study of the depth limits of bioluminescence microscopy and find that cellular resolution imaging should be possible at a depth of 5-10 mean free paths (MFPs). This limit is deeper than the depth limit for confocal microscopy and slightly lower than the imaging limit expected for two-photon microscopy under similar conditions. -
Bioluminescence Imaging of DNA Synthetic Phase of Cell Cycle in Living Animals
Bioluminescence Imaging of DNA Synthetic Phase of Cell Cycle in Living Animals Zhi-Hong Chen1,2, Rui-Jun Zhao1,3, Rong-Hui Li1,3, Cui-Ping Guo1,3, Guo-Jun Zhang1,3* 1 Breast Center, Cancer Hospital of Shantou University Medical College, Shantou, People’s Republic of China, 2 Heilongjiang Province Key Laboratory of Cancer Prevention and Treatment, Mudanjiang Medical University, Mudanjiang, People’s Republic of China, 3 Cancer Research Center, Shantou University Medical College, Shantou, People’s Republic of China Abstract Bioluminescence reporter proteins have been widely used in the development of tools for monitoring biological events in living cells. Currently, some assays like flow cytometry analysis are available for studying DNA synthetic phase (S-phase) targeted anti-cancer drug activity in vitro; however, techniques for imaging of in vivo models remain limited. Cyclin A2 is known to promote S-phase entry in mammals. Its expression levels are low during G1-phase, but they increase at the onset of S-phase. Cyclin A2 is degraded during prometaphase by ubiquitin-dependent, proteasome-mediated proteolysis. In this study, we have developed a cyclin A2-luciferase (CYCA-Luc) fusion protein targeted for ubiquitin-proteasome dependent degradation, and have evaluated its utility in screening S-phase targeted anti-cancer drugs. Similar to endogenous cyclin A2, CYCA-Luc accumulates during S-phase and is degraded during G2/M-phase. Using Cdc20 siRNA we have demonstrated that Cdc20 can mediate CYCA-Luc degradation. Moreover, using noninvasive bioluminescent imaging, we demonstrated accumulation of CYCA-Luc in response to 10-hydroxycamptothecin (HCPT), an S-phase targeted anti-cancer drug, in human tumor cells in vivo and in vitro. -
Molecular and Cellular Networks in the Suprachiasmatic Nuclei
International Journal of Molecular Sciences Review Molecular and Cellular Networks in The Suprachiasmatic Nuclei Lama El Cheikh Hussein, Patrice Mollard and Xavier Bonnefont * Institut de Génomique Fonctionnelle (IGF), University Montpellier, CNRS, INSERM, 34094 Montpellier, France; [email protected] (L.E.C.H.); [email protected] (P.M.) * Correspondence: [email protected]; Tel.: +33-4-3435-9306 Received: 1 April 2019; Accepted: 23 April 2019; Published: 25 April 2019 Abstract: Why do we experience the ailments of jetlag when we travel across time zones? Why is working night-shifts so detrimental to our health? In other words, why can’t we readily choose and stick to non-24 h rhythms? Actually, our daily behavior and physiology do not simply result from the passive reaction of our organism to the external cycle of days and nights. Instead, an internal clock drives the variations in our bodily functions with a period close to 24 h, which is supposed to enhance fitness to regular and predictable changes of our natural environment. This so-called circadian clock relies on a molecular mechanism that generates rhythmicity in virtually all of our cells. However, the robustness of the circadian clock and its resilience to phase shifts emerge from the interaction between cell-autonomous oscillators within the suprachiasmatic nuclei (SCN) of the hypothalamus. Thus, managing jetlag and other circadian disorders will undoubtedly require extensive knowledge of the functional organization of SCN cell networks. Here, we review the molecular and cellular principles of circadian timekeeping, and their integration in the multi-cellular complexity of the SCN. -
Strongly Enhanced Bacterial Bioluminescence with the Ilux Operon for Single-Cell Imaging
Strongly enhanced bacterial bioluminescence with the ilux operon for single-cell imaging Carola Gregora,1, Klaus C. Gwoscha, Steffen J. Sahla, and Stefan W. Hella,b,1 aDepartment of NanoBiophotonics, Max Planck Institute for Biophysical Chemistry, 37077 Göttingen, Germany; and bDepartment of Optical Nanoscopy, Max Planck Institute for Medical Research, 69120 Heidelberg, Germany Contributed by Stefan W. Hell, December 8, 2017 (sent for review September 12, 2017; reviewed by David W. Piston and Alice Y. Ting) Bioluminescence imaging of single cells is often complicated by the filters are required, making the setup very simple. In addition, it is requirement of exogenous luciferins that can be poorly cell- possible to study processes where the intense excitation light re- permeable or produce high background signal. Bacterial biolumi- quired for fluorescence measurements would be disturbing, such + nescence is unique in that it uses reduced flavin mononucleotide as circadian rhythms or Ca2 activity in the retina (3, 4). Third, no as a luciferin, which is abundant in all cells, making this system phototoxicity or bleaching occurs, allowing image acquisition over purely genetically encodable by the lux operon. Unfortunately, the arbitrary timespans. Furthermore, bioluminescence is dependent use of bacterial bioluminescence has been limited by its low on metabolic energy, and hence, only metabolically active cells are brightness compared with other luciferases. Here, we report the visible, preventing artifacts due to the observation of severely generation of an improved lux operon named ilux with an approx- damaged or dead cells. imately sevenfold increased brightness when expressed in Escheri- In addition to the limitation by their low brightness, the lucif- chia coli; ilux can be used to image single E. -
Current Understanding of the Circadian Clock Within Cnidaria 31
Current Understanding of the Circadian Clock Within Cnidaria 31 Kenneth D. Hoadley , Peter D. Vize , and Sonja J. Pyott Abstract Molecularly-based timing systems drive many periodic biological processes in both animals and plants. In cnidarians these periodic processes include daily cycles in metabolism, growth, and tentacle and body wall movements and monthly or yearly reproductive activity. In this chapter we review the current understanding of biological clocks in the cnidaria, with an empha- sis on the molecular underpinnings of these processes. The genes that form this molecular clock and drive biological rhythms in well-characterized genetic systems such as Drosophila and mouse are highly conserved in cnidarians and, like these model systems, display diel cycles in transcription levels. In addition to describing the clock genes, we also review potential entrain- ing systems and discuss the broader implications of biological clocks in cnidarian biology. Keywords Circadian rhythms • Biological clocks • Reproductive timing • Non-visual photodetection • Light perception 31.1 Overview of studies focusing on the molecular basis of the circadian clock . Across species, from bacteria, to fungi, to plants and Entrainment of physiological rhythms to environmental cues animals, this molecular circadian clock involves transcription is ubiquitous among living organisms and allows coordination and translation feedback loops with a self-sustained period of of biology and behavior with daily environmental changes . about 24 h (reviewed in Dunlap 1999 ). Investigation in the This coordination improves survival and reproductive fi tness , model genetic species, mouse and fl y, has identifi ed a core set and, thus, it is not surprising that an endogenous “clock” has of genes that form the central oscillator in animals (reviewed evolved to maintain rhythmicity over a circadian (24 h) period. -
Mammalian Circadian Clock and Metabolism – the Epigenetic Link
Commentary 3837 Mammalian circadian clock and metabolism – the epigenetic link Marina Maria Bellet and Paolo Sassone-Corsi* Department of Pharmacology, Unite 904 Inserm ‘Epigenetics and Neuronal Plasticity’, School of Medicine, University of California, Irvine, Irvine, CA 92697, USA *Author for correspondence ([email protected]) Journal of Cell Science 123, 3837-3848 © 2010. Published by The Company of Biologists Ltd doi:10.1242/jcs.051649 Summary Circadian rhythms regulate a wide variety of physiological and metabolic processes. The clock machinery comprises complex transcriptional–translational feedback loops that, through the action of specific transcription factors, modulate the expression of as many as 10% of cellular transcripts. This marked change in gene expression necessarily implicates a global regulation of chromatin remodeling. Indeed, various descriptive studies have indicated that histone modifications occur at promoters of clock-controlled genes (CCGs) in a circadian manner. The finding that CLOCK, a transcription factor crucial for circadian function, has intrinsic histone acetyl transferase (HAT) activity has paved the way to unraveling the molecular mechanisms that govern circadian chromatin remodeling. A search for the histone deacetylase (HDAC) that counterbalances CLOCK activity revealed that SIRT1, a nicotinamide adenin dinucleotide (NAD+)-dependent HDAC, functions in a circadian manner. Importantly, SIRT1 is a regulator of aging, inflammation and metabolism. As many transcripts that oscillate in mammalian peripheral tissues encode proteins that have central roles in metabolic processes, these findings establish a functional and molecular link between energy balance, chromatin remodeling and circadian physiology. Here we review recent studies that support the existence of this link and discuss their implications for understanding mammalian physiology and pathology. -
Impact of Circadian Disruption on Glucose Metabolism: Implications for Type 2 Diabetes
Diabetologia (2020) 63:462–472 https://doi.org/10.1007/s00125-019-05059-6 REVIEW Impact of circadian disruption on glucose metabolism: implications for type 2 diabetes Ivy C. Mason1,2 & Jingyi Qian1,2 & Gail K. Adler3 & Frank A. J. L. Scheer1,2 Received: 6 June 2019 /Accepted: 19 August 2019 /Published online: 8 January 2020 # Springer-Verlag GmbH Germany, part of Springer Nature 2020 Abstract The circadian system generates endogenous rhythms of approximately 24 h, the synchronisation of which are vital for healthy bodily function. The timing of many physiological processes, including glucose metabolism, are coordinated by the circadian system, and circadian disruptions that desynchronise or misalign these rhythms can result in adverse health outcomes. In this review, we cover the role of the circadian system and its disruption in glucose metabolism in healthy individuals and individuals with type 2 diabetes mellitus. We begin by defining circadian rhythms and circadian disruption and then we provide an overview of circadian regulation of glucose metabolism. We next discuss the impact of circadian disruptions on glucose control and type 2 diabetes. Given the concurrent high prevalence of type 2 diabetes and circadian disruption, understanding the mechanisms underlying the impact of circadian disruption on glucose metabolism may aid in improving glycaemic control. Keywords Beta cell function . Circadian disruption . Circadian misalignment . Circadian rhythm . Diabetes . Glucose control . Glucose metabolism . Glucose tolerance . Insulin sensitivity . Review . Type 2 diabetes mellitus Abbreviation living with type 1 or type 2 diabetes. The prevalence of SCN Suprachiasmatic nucleus type 1 and type 2 diabetes is projected to increase to 693 million adults worldwide by 2045 [2]. -
Resetting the Biological Clock: Mediation of Nocturnal CREB Phosphorylation Via Light, Glutamate, and Nitric Oxide
The Journal of Neuroscience, January 15, 1997, 17(2):667–675 Resetting the Biological Clock: Mediation of Nocturnal CREB Phosphorylation via Light, Glutamate, and Nitric Oxide Jian M. Ding,1,3 Lia E. Faiman,1 William J. Hurst,1 Liana R. Kuriashkina,2 and Martha U. Gillette1,2,3 1Department of Cell and Structural Biology, 2Molecular and Integrative Physiology, and 3The Neuroscience Program, University of Illinois, Urbana, Illinois 61801 Synchronization between the environmental lighting cycle and neurons in which P-CREB-lir was induced by light were the biological clock in the suprachiasmatic nucleus (SCN) is NADPH-diaphorase-positive neurons of the SCN’s retinorecipi- correlated with phosphorylation of the Ca21/cAMP response ent area. Glu treatment increased the intensity of a 43 kDa band element binding protein (CREB) at the transcriptional activating recognized by anti-P-CREB antibodies in subjective night but site Ser133. Mechanisms mediating the formation of phospho- not day, whereas anti-aCREB-lir of this band remained con- CREB (P-CREB) and their relation to clock resetting are un- stant between night and day. Inhibition of NOS during Glu known. To address these issues, we probed the signaling stimulation diminished the anti-P-CREB-lir of this 43 kDa band. pathway between light and P-CREB. Nocturnal light rapidly and Together, these data couple nocturnal light, Glu, NMDA recep- transiently induced P-CREB-like immunoreactivity (P-CREB-lir) tor activation and NO signaling to CREB phosphorylation in the in the rat SCN. Glutamate (Glu) or nitric oxide (NO) donor transduction of brief environmental light stimulation of the ret- administration in vitro also induced P-CREB-lir in SCN neurons ina into molecular changes in the SCN resulting in phase re- only during subjective night.