Preliminary Survey of Zooxanthellate Zoanthids (Cnidaria : Hexacorallia) of the Galapagos, and Associated Symbiotic Dinoflagellates (Symbiodinium Spp.)
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Characterization of Translationally Controlled Tumour Protein from the Sea Anemone Anemonia Viridis and Transcriptome Wide Identification of Cnidarian Homologues
G C A T T A C G G C A T genes Article Characterization of Translationally Controlled Tumour Protein from the Sea Anemone Anemonia viridis and Transcriptome Wide Identification of Cnidarian Homologues Aldo Nicosia 1,* ID , Carmelo Bennici 1, Girolama Biondo 1, Salvatore Costa 2 ID , Marilena Di Natale 1, Tiziana Masullo 1, Calogera Monastero 1, Maria Antonietta Ragusa 2, Marcello Tagliavia 1 and Angela Cuttitta 1,* 1 National Research Council-Institute for Marine and Coastal Environment (IAMC-CNR), Laboratory of Molecular Ecology and Biotechnology, Detached Unit of Capo Granitola, Via del mare, 91021 Torretta Granitola (TP), Sicily, Italy; [email protected] (C.B.); [email protected] (G.B.); [email protected] (M.D.N.); [email protected] (T.M.); [email protected] (C.M.); [email protected] (M.T.) 2 Department of Biological, Chemical and Pharmaceutical Sciences and Technologies, University of Palermo, Viale delle Scienze, Ed. 16, 90128 Palermo, Sicily, Italy; [email protected] (S.C.); [email protected] (M.A.R.) * Correspondence: [email protected] (A.N.); [email protected] (A.C.); Tel.: +39-0924-40600 (A.N. & A.C.) Received: 10 November 2017; Accepted: 5 January 2018; Published: 11 January 2018 Abstract: Gene family encoding translationally controlled tumour protein (TCTP) is defined as highly conserved among organisms; however, there is limited knowledge of non-bilateria. In this study, the first TCTP homologue from anthozoan was characterised in the Mediterranean Sea anemone, Anemonia viridis. The release of the genome sequence of Acropora digitifera, Exaiptasia pallida, Nematostella vectensis and Hydra vulgaris enabled a comprehensive study of the molecular evolution of TCTP family among cnidarians. -
Resurrecting a Subgenus to Genus: Molecular Phylogeny of Euphyllia and Fimbriaphyllia (Order Scleractinia; Family Euphylliidae; Clade V)
Resurrecting a subgenus to genus: molecular phylogeny of Euphyllia and Fimbriaphyllia (order Scleractinia; family Euphylliidae; clade V) Katrina S. Luzon1,2,3,*, Mei-Fang Lin4,5,6,*, Ma. Carmen A. Ablan Lagman1,7, Wilfredo Roehl Y. Licuanan1,2,3 and Chaolun Allen Chen4,8,9,* 1 Biology Department, De La Salle University, Manila, Philippines 2 Shields Ocean Research (SHORE) Center, De La Salle University, Manila, Philippines 3 The Marine Science Institute, University of the Philippines, Quezon City, Philippines 4 Biodiversity Research Center, Academia Sinica, Taipei, Taiwan 5 Department of Molecular and Cell Biology, James Cook University, Townsville, Australia 6 Evolutionary Neurobiology Unit, Okinawa Institute of Science and Technology Graduate University, Okinawa, Japan 7 Center for Natural Sciences and Environmental Research (CENSER), De La Salle University, Manila, Philippines 8 Taiwan International Graduate Program-Biodiversity, Academia Sinica, Taipei, Taiwan 9 Institute of Oceanography, National Taiwan University, Taipei, Taiwan * These authors contributed equally to this work. ABSTRACT Background. The corallum is crucial in building coral reefs and in diagnosing systematic relationships in the order Scleractinia. However, molecular phylogenetic analyses revealed a paraphyly in a majority of traditional families and genera among Scleractinia showing that other biological attributes of the coral, such as polyp morphology and reproductive traits, are underutilized. Among scleractinian genera, the Euphyllia, with nine nominal species in the Indo-Pacific region, is one of the groups Submitted 30 May 2017 that await phylogenetic resolution. Multiple genetic markers were used to construct Accepted 31 October 2017 Published 4 December 2017 the phylogeny of six Euphyllia species, namely E. ancora, E. divisa, E. -
Anthozoa: Hexacorallia: Scleractinia: Dendrophylliidae) from Korea
Anim. Syst. Evol. Divers. Vol. 32, No. 1: 38-43, January 2016 http://dx.doi.org/10.5635/ASED.2016.32.1.038 Short communication A New Record of Dendrophyllia compressa (Anthozoa: Hexacorallia: Scleractinia: Dendrophylliidae) from Korea Eunae Choi, Jun-Im Song* College of Natural Sciences, Ewha Womans University, Seoul 03760, Korea ABSTRACT Dendrophyllia compressa Ogawa and Takahashi, 1995 is newly reported from Korea. The specimen was collected off Seogwipo, Jeju-do, Korea in 1969. It is described herein based on the morphological characters of the skeletal structures. Dendrophyllia compressa is characterized by its small and bushy growth form with branches, vertical growth direction, small calicular diameter, compressed calice, Pourtalès Plan with vertical septal inner edges, flat and spongy columella, exserted septal upper margins, and epitheca. Dendrophyllia compressa has been synonymized with Cladopsammia eguchii (Wells, 1982). However, the former species differs from the latter species in its growth form, growth direction, colony size, corallite size, and corallite shape. Keywords: Anthozoa, Scleractinia, Dendrophylliidae, Dendrophyllia, Korea INTRODUCTION cribed. The specimen was collected from the subtidal zone off The family Dendrophylliidae Gray, 1847 comprises 167 Seogwipo, Jeju-do, Korea in 1969. It was dissolved in sod- species in 21 genera (Cairns, 2001; Roberts et al., 2009; ium hypochlorite solution diluted with distilled water for World Register of Marine Species, 2015). Among these 24 hours to remove all the soft tissues, washed in distilled species, 29 species in the genus Dendrophyllia have been water, and dried for the examination of the skeletal struc- reported worldwide (Roberts et al., 2009; World Register of tures. The external growth forms and shapes of the coralla Marine Species, 2015). -
The Earliest Diverging Extant Scleractinian Corals Recovered by Mitochondrial Genomes Isabela G
www.nature.com/scientificreports OPEN The earliest diverging extant scleractinian corals recovered by mitochondrial genomes Isabela G. L. Seiblitz1,2*, Kátia C. C. Capel2, Jarosław Stolarski3, Zheng Bin Randolph Quek4, Danwei Huang4,5 & Marcelo V. Kitahara1,2 Evolutionary reconstructions of scleractinian corals have a discrepant proportion of zooxanthellate reef-building species in relation to their azooxanthellate deep-sea counterparts. In particular, the earliest diverging “Basal” lineage remains poorly studied compared to “Robust” and “Complex” corals. The lack of data from corals other than reef-building species impairs a broader understanding of scleractinian evolution. Here, based on complete mitogenomes, the early onset of azooxanthellate corals is explored focusing on one of the most morphologically distinct families, Micrabaciidae. Sequenced on both Illumina and Sanger platforms, mitogenomes of four micrabaciids range from 19,048 to 19,542 bp and have gene content and order similar to the majority of scleractinians. Phylogenies containing all mitochondrial genes confrm the monophyly of Micrabaciidae as a sister group to the rest of Scleractinia. This topology not only corroborates the hypothesis of a solitary and azooxanthellate ancestor for the order, but also agrees with the unique skeletal microstructure previously found in the family. Moreover, the early-diverging position of micrabaciids followed by gardineriids reinforces the previously observed macromorphological similarities between micrabaciids and Corallimorpharia as -
The Aquaculture of Live Rock, Live Sand, Coral and Associated Products
AQUACULTURE OF LIVE ROCKS, LIVE SAND, CORAL AND ASSOCIATED PRODUCTS A DISCUSSION AND DRAFT POLICY PAPER FISHERIES MANAGEMENT PAPER NO. 196 Department of Fisheries 168 St. Georges Terrace Perth WA 6000 April 2006 ISSN 0819-4327 The Aquaculture of Live Rock, Live Sand, Coral and Associated Products A Discussion and Draft Policy Paper Project Managed by Andrew Beer April 2006 Fisheries Management Paper No. 196 ISSN 0819-4327 Fisheries Management Paper No. 196 CONTENTS OPPORTUNITY FOR PUBLIC COMMENT...............................................................IV DISCLAIMER V ACKNOWLEDGEMENT..................................................................................................V SECTION 1 EXECUTIVE SUMMARY & PROPOSED POLICY OPTIONS ....... 1 SECTION 2 INTRODUCTION.................................................................................... 5 2.1 BACKGROUND ............................................................................................. 5 2.2 OBJECTIVES................................................................................................. 5 2.3 WHY LIVE ROCK, SAND AND CORAL AQUACULTURE? ............................... 6 2.4 MARKET...................................................................................................... 6 SECTION 3 THE TAXONOMY AND BIOLOGY OF LIVE ROCK, SAND AND CORAL ..................................................................................................... 9 3.1 LIVE ROCK ................................................................................................. -
Target Substrata
TARGET SUBSTRATA OVERVIEW CORALS AND THEIR RELATIVES STONY HEXACORALS OTHER HEXACORALS OCTOCORALS HYDROZOANS Acropora Sea Anemones Soft Corals Fire Coral Non-Acropora Zoanthids Sea Fans Lace Coral Black Coral Blue Coral Hydroids Corallimorpharians Organ Pipe OTHER SUBSTRATA Sponge Macroalgae Dead Coral Rock Coralline Algae Dead Coral With Algae Rubble Algal Assemblage Turf Algae Sand Silt CORALS AND THEIR RELATIVES STONY CORALS ACROPORA Phylum Cnidaria | Class Anthozoa | Sub-Class Hexacorallia | Order Scleractinia (Hard Corals) | Family Acroporidae | Genus Acropora Acropora is one genus within the family of Acroporidae; Generally, the species are characterized by the presence of an axial (terminal) corallite (skeleton of an individual polyp) at the branch tips surrounded by radial corallites; The name Acropora is derived from the Greek “akron” which means summit. Acropora Branching Barefoot Conservation | TARGET SUBSTRATA | July 2016 1 Acropora Bottlebrush Acropora Digitate Acropora Tabulate Barefoot Conservation | TARGET SUBSTRATA | July 2016 2 Acropora Submassive Acropora Encrusting Non-Acropora Phylum Cnidaria | Class Anthozoa | Sub-Class Hexacorallia | Order Scleractinia (Hard Corals) | Family Acroporidae Coral Branching Barefoot Conservation | TARGET SUBSTRATA | July 2016 3 (continued) Coral Branching Coral Massive Barefoot Conservation | TARGET SUBSTRATA | July 2016 4 Coral Encrusting Coral Foliose Coral Submassive Barefoot Conservation | TARGET SUBSTRATA | July 2016 5 (continued) Coral Submassive Coral Mushroom Barefoot Conservation -
Radiocarbon-Based Ages and Growth Rates of Hawaiian Deep-Sea Corals
MARINE ECOLOGY PROGRESS SERIES Vol. 327: 1–14, 2006 Published December 7 Mar Ecol Prog Ser OPENPEN ACCESSCCESS FEATURE ARTICLE Radiocarbon-based ages and growth rates of Hawaiian deep-sea corals E. Brendan Roark1, 4,*, Thomas P. Guilderson2, 3, Robert B. Dunbar4, B. Lynn Ingram1, 5 1Department of Geography, University of California, Berkeley, California 94720-4740, USA 2Center for Accelerator Mass Spectrometry, LLNL, L-397 7000 East Avenue, Livermore, California 94551, USA 3Department of Ocean Sciences and Institute of Marine Sciences, University of California, Santa Cruz, California 95064, USA 4Geological and Environmental Sciences, Stanford University, Stanford, California 94305-2115, USA 5Department of Earth and Planetary Science, University of California, Berkeley, California 94720-4767, USA ABSTRACT: The radial growth rates and ages of 3 differ- ent groups of Hawaiian deep-sea ‘corals’ were deter- mined using radiocarbon measurements. Specimens of Corallium secundum, Gerardia sp., and Leiopathes glaberrima were collected from 450 ± 40 m depth at the Makapuu deep-sea coral bed off the southeast coast of Oahu, Hawaii, USA, using a submersible vessel (PISCES V). Specimens of Antipathes dichotoma were collected at 50 m depth off Lahaina, Maui, Hawaii. The primary source of carbon to the calcitic C. secundum skeleton is in situ dissolved inorganic carbon (DIC). Using ‘bomb 14C’ time markers we calculated radial growth rates of ~170 µm yr–1 and ages of 67 to 71 yr for specimens of C. secundum up to 28 cm tall. Gerardia sp., A. dichotoma, and L. glaberrima have proteinaceous skeletons, and la- bile particulate organic carbon (POC) is their primary Radiocarbon dating shows that deep-sea corals grow more source of architectural carbon. -
An Updated Overview of the Geographic and Bathymetric Distribution of Savalia Savaglia M
Research Article Mediterranean Marine Science Indexed in WoS (Web of Science, ISI Thomson) and SCOPUS The journal is available on line at http://www.medit-mar-sc.net DOI: http://dx.doi.org/10.12681/mms890 An updated overview of the geographic and bathymetric distribution of Savalia savaglia M. GIUSTI1, C. CERRANO2, M. ANGIOLILLO1, L. TUNESI1 and S. CANESE1 1 Italian National Institute for Environmental Protection and Research (ISPRA), Via Brancati 60, 00144 Roma, Italy 2 Department of Life and Environmental Sciences, Polytechnic University of Marche, Ancona, Italy Corresponding author: [email protected] Handling Editor: Argyro Zenetos Received: 29 April 2014; Accepted: 8 October 2014; Published on line: 6 February 2015 Abstract The distribution of gold coral Savalia savaglia is modified on the basis of bibliographic information and recent occurrence data collected by ROV (Remotely Operated Vehicle) and SCUBA divers. The species is long-lived, rare and has been exploited in the past by divers for collection purposes. S. savaglia is listed in Annex II of the SPA/BD Protocol of the Barcelona Convention and has a wider distribution than previously thought, including both the Mediterranean Sea and the Atlantic Ocean. Our results highlighted that specimens mainly live at a depth range of 15-90 m, but may reach as deep as 900 m in the Mediterranean Sea. This species can form monospecific facies of hundreds of colonies, as observed in Montenegro (Adriatic Sea), between 10 and 20 m, and in the Canary Islands, at a depth range of 27-70 m. Recent data highlighted numerous cases of specimens that were endangered by lost fishing gear, which exposed this species to further threats. -
Adorable Anemone
inspirationalabout this guide | about anemones | colour index | species index | species pages | icons | glossary invertebratesadorable anemonesa guide to the shallow water anemones of New Zealand Version 1, 2019 Sadie Mills Serena Cox with Michelle Kelly & Blayne Herr 1 about this guide | about anemones | colour index | species index | species pages | icons | glossary about this guide Anemones are found everywhere in the sea, from under rocks in the intertidal zone, to the deepest trenches of our oceans. They are a colourful and diverse group, and we hope you enjoy using this guide to explore them further and identify them in the field. ADORABLE ANEMONES is a fully illustrated working e-guide to the most commonly encountered shallow water species of Actiniaria, Corallimorpharia, Ceriantharia and Zoantharia, the anemones of New Zealand. It is designed for New Zealanders like you who live near the sea, dive and snorkel, explore our coasts, make a living from it, and for those who educate and are charged with kaitiakitanga, conservation and management of our marine realm. It is one in a series of e-guides on New Zealand Marine invertebrates and algae that NIWA’s Coasts and Oceans group is presently developing. The e-guide starts with a simple introduction to living anemones, followed by a simple colour index, species index, detailed individual species pages, and finally, icon explanations and a glossary of terms. As new species are discovered and described, new species pages will be added and an updated version of this e-guide will be made available. Each anemone species page illustrates and describes features that will enable you to differentiate the species from each other. -
Zoanthid (Cnidaria: Anthozoa: Hexacorallia: Zoantharia) Species of Coral Reefs in Palau
Mar Biodiv DOI 10.1007/s12526-013-0180-5 ORIGINAL PAPER Zoanthid (Cnidaria: Anthozoa: Hexacorallia: Zoantharia) species of coral reefs in Palau James Davis Reimer & Doris Albinsky & Sung-Yin Yang & Julien Lorion Received: 3 June 2013 /Revised: 16 August 2013 /Accepted: 20 August 2013 # Senckenberg Gesellschaft für Naturforschung and Springer-Verlag Berlin Heidelberg 2013 Abstract Palau is world famous for its relatively pristine and Introduction highly diverse coral reefs, yet for many coral reef invertebrate taxa, few data exist on their diversity in this Micronesian coun- Palau is located at the southwestern corner of Micronesia, and try. One such taxon is the Zoantharia, an order of benthic is just outside the Coral Triangle, the region with the highest cnidarians within the Class Anthozoa (Subclass Hexacorallia) marine biodiversity in the world (Hoeksema 2007). Thus, Palau that are commonly found in shallow subtropical and tropical is an important link between the central Indo-Pacific and the waters. Here, we examine the species diversity of zoanthids in Pacific Islands, and diversity and distribution data of marine Palau for the first time, based on shallow-water (<35 m) scuba organisms from Palau can help us to understand the evolutionary surveys and morphological identification to create a preliminary and biogeographical history of the region. Because of Palau’s zoanthid species list for Palau. Our results indicated the presence combination of a high habitat diversity with a close proximity to of nine zoanthid species in Palau (Zoanthus sansibaricus, Z. the Coral Triangle, it has the most diverse marine flora and fauna gigantus, Palythoa tuberculosa, P. mutuki, P. -
Three New Species and the Molecular Phylogeny of Antipathozoanthus
A peer-reviewed open-access journal ZooKeys 725: 97–122Three (2017) new species and the molecular phylogeny ofAntipathozoanthus ... 97 doi: 10.3897/zookeys.725.21006 RESEARCH ARTICLE http://zookeys.pensoft.net Launched to accelerate biodiversity research Three new species and the molecular phylogeny of Antipathozoanthus from the Indo-Pacific Ocean (Anthozoa, Hexacorallia, Zoantharia) Hiroki Kise1,2, Takuma Fujii1,3, Giovanni Diego Masucci1, Piera Biondi1, James Davis Reimer1,2,4 1 Molecular Invertebrate Systematics and Ecology Laboratory, Graduate School of Engineering and Science, University of the Ryukyus, 1 Senbaru, Nishihara, Okinawa 903-0213, Japan 2 Palau International Coral Reef Center, 1-M-Dock Road, Koror, Palau 96940 3 Research Center for Island Studies Amami Station, Kagoshima University, Naze-Yanagimachi 2-1, Amami, Kagoshima 894-0032, Japan 4 Tropical Biosphere Research Cen- ter, University of the Ryukyus, 1 Senbaru, Nishihara, Okinawa 903-0213, Japan Corresponding author: Hiroki Kise ([email protected]) Academic editor: B.W. Hoeksema | Received 15 September 2017 | Accepted 7 November 2017 | Published 29 December 2017 http://zoobank.org/E47535C1-21CF-417C-A212-F6E819080565 Citation: Kise H, Fujii T, Masucci GD, Biondi P, Reimer JD (2017) Three new species and the molecular phylogeny of Antipathozoanthus from the Indo-Pacific Ocean (Anthozoa, Hexacorallia, Zoantharia). ZooKeys 725: 97–122.https:// doi.org/10.3897/zookeys.725.21006 Abstract In this study, three new species of macrocnemic zoantharians (Hexacorallia, Zoantharia) are described from localities in the Indo-Pacific Ocean including the Red Sea, the Maldives, Palau, and southern Ja- pan: Antipathozoanthus obscurus sp. n., A. remengesaui sp. n., and A. cavernus sp. -
Aquaculture of Coral, Live Rocks and Associated Products
AQUACULTURE OF CORAL, LIVE ROCKS AND ASSOCIATED PRODUCTS Aquaculture Policy FISHERIES MANAGEMENT PAPER NO. 245 Published by Department of Fisheries 168 St. Georges Terrace Perth WA 6000 August 2009 ISSN 0819-4327 The Aquaculture of Coral, Live Rocks and Associated Products Aquaculture Policy August 2009 Fisheries Management Paper No. 245 ISSN 0819-4327 ii Fisheries Management Paper No.245 CONTENTS DISCLAIMER...................................................................................................................... iv ACKNOWLEDGEMENT ................................................................................................... iv EXECUTIVE SUMMARY ................................................................................................. 1 SECTION 1 INTRODUCTION ........................................................................................ 2 SECTION 2 BACKGROUND .......................................................................................... 3 2.1 What is Coral? ...................................................................................................... 3 2.1.1 Stony Corals .......................................................................................... 3 2.1.2 Soft Corals ............................................................................................. 5 2.1.3 False Corals and Coral Anemones – the Coralliomorphs ...................... 6 2.1.4 Button Polyps – the Zoanthids ............................................................... 6 2.2 What are Live Rock and