Zoanthid (Cnidaria: Anthozoa: Hexacorallia: Zoantharia) Species of Coral Reefs in Palau
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Characterization of Translationally Controlled Tumour Protein from the Sea Anemone Anemonia Viridis and Transcriptome Wide Identification of Cnidarian Homologues
G C A T T A C G G C A T genes Article Characterization of Translationally Controlled Tumour Protein from the Sea Anemone Anemonia viridis and Transcriptome Wide Identification of Cnidarian Homologues Aldo Nicosia 1,* ID , Carmelo Bennici 1, Girolama Biondo 1, Salvatore Costa 2 ID , Marilena Di Natale 1, Tiziana Masullo 1, Calogera Monastero 1, Maria Antonietta Ragusa 2, Marcello Tagliavia 1 and Angela Cuttitta 1,* 1 National Research Council-Institute for Marine and Coastal Environment (IAMC-CNR), Laboratory of Molecular Ecology and Biotechnology, Detached Unit of Capo Granitola, Via del mare, 91021 Torretta Granitola (TP), Sicily, Italy; [email protected] (C.B.); [email protected] (G.B.); [email protected] (M.D.N.); [email protected] (T.M.); [email protected] (C.M.); [email protected] (M.T.) 2 Department of Biological, Chemical and Pharmaceutical Sciences and Technologies, University of Palermo, Viale delle Scienze, Ed. 16, 90128 Palermo, Sicily, Italy; [email protected] (S.C.); [email protected] (M.A.R.) * Correspondence: [email protected] (A.N.); [email protected] (A.C.); Tel.: +39-0924-40600 (A.N. & A.C.) Received: 10 November 2017; Accepted: 5 January 2018; Published: 11 January 2018 Abstract: Gene family encoding translationally controlled tumour protein (TCTP) is defined as highly conserved among organisms; however, there is limited knowledge of non-bilateria. In this study, the first TCTP homologue from anthozoan was characterised in the Mediterranean Sea anemone, Anemonia viridis. The release of the genome sequence of Acropora digitifera, Exaiptasia pallida, Nematostella vectensis and Hydra vulgaris enabled a comprehensive study of the molecular evolution of TCTP family among cnidarians. -
Hexacorallia: Zoantharia) Populations on Shores in Kwazulu-Natal, South Africa
Zootaxa 3986 (2): 332–356 ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2015 Magnolia Press ISSN 1175-5334 (online edition) http://dx.doi.org/10.11646/zootaxa.3986.3.4 http://zoobank.org/urn:lsid:zoobank.org:pub:DCF49848-49C7-4972-B88D-05986300F30E Size-defined morphotypes in Zoanthus (Hexacorallia: Zoantharia) populations on shores in KwaZulu-Natal, South Africa JOHN S. RYLAND Department of Biosciences, Wallace Building, Swansea University, Swansea SA2 8PP, Wales UK. E-mail: [email protected] Abstract Colonial zoanthids are a conspicuous feature of the subtropical rocky intertidal in KwaZulu-Natal but those of the genus Zoanthus have a confused taxonomy with 10, difficult to separate, nominal species described from the region. This paper presents an analysis of polyp size, measured as mean diameter determined photographically from the number of polyps occupying an area of 6 × 4 cm2. The results, based on diameter frequency of 127 samples from five shores, indicate three populations (morphotypes) with means of 4.3 (SD ±0.53), 5.7 (SD ±0.70) and 8.4 (SD ±0.58) mm occurring in the ap- proximate abundance ratios of 10:5:1, possibly corresponding to Zoanthus sansibaricus, Z. natalensis and Z. lawrencei. The underlying assumptions with regard to population structure (the number, size and degree of fragmentation of clones) and the normality of data are discussed, as are trans-oceanic larval dispersal, recruitment, and genetic connectivity. The essential, traditional species description in Zoanthus, using internal morphology, on its own may be an inadequate discrim- inator of species. -
Guide to the Identification of Precious and Semi-Precious Corals in Commercial Trade
'l'llA FFIC YvALE ,.._,..---...- guide to the identification of precious and semi-precious corals in commercial trade Ernest W.T. Cooper, Susan J. Torntore, Angela S.M. Leung, Tanya Shadbolt and Carolyn Dawe September 2011 © 2011 World Wildlife Fund and TRAFFIC. All rights reserved. ISBN 978-0-9693730-3-2 Reproduction and distribution for resale by any means photographic or mechanical, including photocopying, recording, taping or information storage and retrieval systems of any parts of this book, illustrations or texts is prohibited without prior written consent from World Wildlife Fund (WWF). Reproduction for CITES enforcement or educational and other non-commercial purposes by CITES Authorities and the CITES Secretariat is authorized without prior written permission, provided the source is fully acknowledged. Any reproduction, in full or in part, of this publication must credit WWF and TRAFFIC North America. The views of the authors expressed in this publication do not necessarily reflect those of the TRAFFIC network, WWF, or the International Union for Conservation of Nature (IUCN). The designation of geographical entities in this publication and the presentation of the material do not imply the expression of any opinion whatsoever on the part of WWF, TRAFFIC, or IUCN concerning the legal status of any country, territory, or area, or of its authorities, or concerning the delimitation of its frontiers or boundaries. The TRAFFIC symbol copyright and Registered Trademark ownership are held by WWF. TRAFFIC is a joint program of WWF and IUCN. Suggested citation: Cooper, E.W.T., Torntore, S.J., Leung, A.S.M, Shadbolt, T. and Dawe, C. -
From Southern Shikoku, Japan
Kuroshio Biosphere Vol. 3, Mar. 2007, pp. 1-16 + 7 pls. PRELIMINARY SURVEY OF ZOOXANTHELLATE ZOANTHID DIVERSITY (HEXACORALLIA: ZOANTHARIA) FROM SOUTHERN SHIKOKU, JAPAN by James Davis REIMER1, 2 Abstract Zooxanthellate members of the order Zoantharia (Anthozoa: Hexacorallia) previously reported from Japan consist of the genera Zoanthus and Isaurus in the family Zoanthidae as well as the genus Palythoa in the family Sphenopidae. In particular, Zoanthus and Palythoa are common in shallow tropical and sub-tropical waters from the southern limits of Japan in Okinawa to their northern limits in the Izu Islands (Miyakejima Island). Previous studies have documented the occurrence of zooxanthellate zoanthids in Okinawa, the Nansei Islands, Kyushu, mid-Honshu (Wakayama), and the Izu Islands, but until now no formal survey of zoanthids occurring in the waters of Shikoku has been conducted. The area surveyed in this study was divided into two regions: zooxanthellate zoanthid diversity was higher (8 species) along the southern Pacific Coast region of Kochi, and lower in waters of the Bungo Strait region (5 species). The majority of observed species listed here were found below the extreme low tide line to depths of approximately 5 m. Zoanthus and Palythoa were found in most sites surveyed, while Isaurus was limited to sites on the Pacific coast. Zooxanthellate zoanthids in southern Shikoku are most abundant in shallow hard substrate marine habitats with a well-developed coastal terrace, and consistent high amounts of wave activity, current, and light levels. Introduction In recent years, research has begun to investigate the diversity of zooxanthellate zoanthids (Anthozoa: Hexacorallia: Zoantharia) from Japanese waters. -
Resurrecting a Subgenus to Genus: Molecular Phylogeny of Euphyllia and Fimbriaphyllia (Order Scleractinia; Family Euphylliidae; Clade V)
Resurrecting a subgenus to genus: molecular phylogeny of Euphyllia and Fimbriaphyllia (order Scleractinia; family Euphylliidae; clade V) Katrina S. Luzon1,2,3,*, Mei-Fang Lin4,5,6,*, Ma. Carmen A. Ablan Lagman1,7, Wilfredo Roehl Y. Licuanan1,2,3 and Chaolun Allen Chen4,8,9,* 1 Biology Department, De La Salle University, Manila, Philippines 2 Shields Ocean Research (SHORE) Center, De La Salle University, Manila, Philippines 3 The Marine Science Institute, University of the Philippines, Quezon City, Philippines 4 Biodiversity Research Center, Academia Sinica, Taipei, Taiwan 5 Department of Molecular and Cell Biology, James Cook University, Townsville, Australia 6 Evolutionary Neurobiology Unit, Okinawa Institute of Science and Technology Graduate University, Okinawa, Japan 7 Center for Natural Sciences and Environmental Research (CENSER), De La Salle University, Manila, Philippines 8 Taiwan International Graduate Program-Biodiversity, Academia Sinica, Taipei, Taiwan 9 Institute of Oceanography, National Taiwan University, Taipei, Taiwan * These authors contributed equally to this work. ABSTRACT Background. The corallum is crucial in building coral reefs and in diagnosing systematic relationships in the order Scleractinia. However, molecular phylogenetic analyses revealed a paraphyly in a majority of traditional families and genera among Scleractinia showing that other biological attributes of the coral, such as polyp morphology and reproductive traits, are underutilized. Among scleractinian genera, the Euphyllia, with nine nominal species in the Indo-Pacific region, is one of the groups Submitted 30 May 2017 that await phylogenetic resolution. Multiple genetic markers were used to construct Accepted 31 October 2017 Published 4 December 2017 the phylogeny of six Euphyllia species, namely E. ancora, E. divisa, E. -
Revision of Isaurus Sp. Diversity Through Molecular Investigation Along the Saurashtra Coast, Gujarat, India
International Journal of Zoology Studies International Journal of Zoology Studies ISSN: 2455-7269 Impact Factor: RJIF 5.14 www.zoologyjournals.com Volume 3; Issue 1; January 2018; Page No. 204-208 Revision of Isaurus sp. diversity through molecular investigation along the Saurashtra coast, Gujarat, India Nevya Thakkar, Kinjal Shah, Pinal Shah, Pradeep Mankodi Division of Freshwater and Marine Biology, Department of Zoology, Faculty of Science, The Maharaja Sayajirao University of Baroda, Vadodara, Gujarat, India Abstract Zoanthids (Order-Zoantheria, Class-Anthozoa) are benthic cnidarians which occupies the larger extent of rocky littoral zone of the tropical seas. The current paper deals with the relationship and phylogenetic confirmation of different Isaurus spp. (Anthozoa: Zoathidae) within the genera. Isaurus sp. are having, non-erect, recumbent polyp and are having tubercles on their body surface except Isaurus cliftoni. This genera is known from both the Atlantic and Indo-Pacific regions and is generally found in intertidal areas. In India, Isaurus spp. are believed to be very rare and have been reported from only a handful of locations like Veraval from a previous survey and Okha, Sutrapada and Vadodara Jhala in the present study. Total 07 specimens of the species were collected. Two species of Isaurus viz., Isaurus tuberculatus and Isaurus maculatus were observed and identified morphologically, however upon doing molecular phylogeny using separate genes like COI, 12s rRNA and 16s rRNA, Isaurus tuberculatus was the only species confirmed. The phylogenetic tree was constructed using 16s rRNA gene. Phylogenetic relationship of the confirmed species also showed 98% similarity with Isaurus tuberculatus of Japan, South Africa and Florida. -
Anthozoa: Hexacorallia: Scleractinia: Dendrophylliidae) from Korea
Anim. Syst. Evol. Divers. Vol. 32, No. 1: 38-43, January 2016 http://dx.doi.org/10.5635/ASED.2016.32.1.038 Short communication A New Record of Dendrophyllia compressa (Anthozoa: Hexacorallia: Scleractinia: Dendrophylliidae) from Korea Eunae Choi, Jun-Im Song* College of Natural Sciences, Ewha Womans University, Seoul 03760, Korea ABSTRACT Dendrophyllia compressa Ogawa and Takahashi, 1995 is newly reported from Korea. The specimen was collected off Seogwipo, Jeju-do, Korea in 1969. It is described herein based on the morphological characters of the skeletal structures. Dendrophyllia compressa is characterized by its small and bushy growth form with branches, vertical growth direction, small calicular diameter, compressed calice, Pourtalès Plan with vertical septal inner edges, flat and spongy columella, exserted septal upper margins, and epitheca. Dendrophyllia compressa has been synonymized with Cladopsammia eguchii (Wells, 1982). However, the former species differs from the latter species in its growth form, growth direction, colony size, corallite size, and corallite shape. Keywords: Anthozoa, Scleractinia, Dendrophylliidae, Dendrophyllia, Korea INTRODUCTION cribed. The specimen was collected from the subtidal zone off The family Dendrophylliidae Gray, 1847 comprises 167 Seogwipo, Jeju-do, Korea in 1969. It was dissolved in sod- species in 21 genera (Cairns, 2001; Roberts et al., 2009; ium hypochlorite solution diluted with distilled water for World Register of Marine Species, 2015). Among these 24 hours to remove all the soft tissues, washed in distilled species, 29 species in the genus Dendrophyllia have been water, and dried for the examination of the skeletal struc- reported worldwide (Roberts et al., 2009; World Register of tures. The external growth forms and shapes of the coralla Marine Species, 2015). -
The Earliest Diverging Extant Scleractinian Corals Recovered by Mitochondrial Genomes Isabela G
www.nature.com/scientificreports OPEN The earliest diverging extant scleractinian corals recovered by mitochondrial genomes Isabela G. L. Seiblitz1,2*, Kátia C. C. Capel2, Jarosław Stolarski3, Zheng Bin Randolph Quek4, Danwei Huang4,5 & Marcelo V. Kitahara1,2 Evolutionary reconstructions of scleractinian corals have a discrepant proportion of zooxanthellate reef-building species in relation to their azooxanthellate deep-sea counterparts. In particular, the earliest diverging “Basal” lineage remains poorly studied compared to “Robust” and “Complex” corals. The lack of data from corals other than reef-building species impairs a broader understanding of scleractinian evolution. Here, based on complete mitogenomes, the early onset of azooxanthellate corals is explored focusing on one of the most morphologically distinct families, Micrabaciidae. Sequenced on both Illumina and Sanger platforms, mitogenomes of four micrabaciids range from 19,048 to 19,542 bp and have gene content and order similar to the majority of scleractinians. Phylogenies containing all mitochondrial genes confrm the monophyly of Micrabaciidae as a sister group to the rest of Scleractinia. This topology not only corroborates the hypothesis of a solitary and azooxanthellate ancestor for the order, but also agrees with the unique skeletal microstructure previously found in the family. Moreover, the early-diverging position of micrabaciids followed by gardineriids reinforces the previously observed macromorphological similarities between micrabaciids and Corallimorpharia as -
Morphological and Molecular Revision of Zoanthus (Anthozoa: Hexacorallia) from Southwestern Japan, with Descriptions of Two New Species
ZOOLOGICAL SCIENCE 23: 261–275 (2006) 2006 Zoological Society of Japan Morphological and Molecular Revision of Zoanthus (Anthozoa: Hexacorallia) from Southwestern Japan, with Descriptions of Two New Species James Davis Reimer1*, Shusuke Ono2, Atsushi Iwama3, Kiyotaka Takishita1, Junzo Tsukahara3 and Tadashi Maruyama1 1Research Program for Marine Biology and Ecology, Extremobiosphere Research Center, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), 2-15 Natsushima, Yokosuka, Kanagawa 237-0061, Japan 2Miyakonojo Higashi High School, Mimata, Miyazaki 889-1996, Japan 3Department of Developmental Biology, Faculty of Science, Kagoshima University, Korimoto 1-21-35, Kagoshima, Kagoshima 890-0065, Japan No clear method of identifying species in the zoanthid genus Zoanthus has been established, due in part to the morphological plasticity of this genus (e.g., in polyp and colony form, oral disk color, tentacle number). Previous research utilizing the mitochondrial cytochrome oxidase I gene (COI) as a phylogenetic marker indicated that Zoanthus spp. in Japan may consist of only one or two species, despite a bewildering variety of observed morphotypes. Here we have utilized not only COI but also mitochondrial 16S ribosomal DNA (mt 16S rDNA) in order to clarify the extent of Zoanthus species diversity in southern Japan. Our molecular genetic results clearly show the presence of three monophyletic Zoanthus species groups with varying levels of morphological plasticity, including the new species Z. gigantus n. sp. and Z. kuroshio n. sp. We describe all three species found in this study, and identify potential morphological characters (coenenchyme and polyp struc- ture as well as polyp external surface pigmentation patterns) useful in Zoanthus species identifi- cation. -
Ibdiocc- Scor Wg
PROPOSAL FOR IBDIOCC- SCOR WG Submitted to: Dr. Edward Urban, Executive Secretary, Scientific Committee for Oceanic Research (SCOR) Submitted by: Dr. Robert Y. George, President, George Institute for Biodiversity and Sustainability (GIBS), 1320 Vanagrif Ct., Wake Forest, North Carolina. Date of Submission: April 15, 2016. IBDIOCC Interaction Between Drivers Impacting Ocean Carbonate Chemistry: How can Deep-Sea Coral Ecosystems respond to ASH/CSH Shoaling in Seamounts that pose imminent threats from Ocean Acidification? Summary/Abstract: We propose a new SCOR Working Group IBDIOCC (2017 to 2019) that seeks to assess new impacts on seamount ecosystems from ocean acidification (OA), that essentially looks at the impact of shoaling of ASH and CSH on the biota that include communities/species associated with deep sea scleractinian corals e.g. Lophelia pertusa and Solenosmilia variabilis) The WG, with members from both southern and northern hemispheres, seeks to re-evaluate and augment the science priorities defined in 2012 by the Census of the Marine Life, but taking into account the new climate change threats and challenges from shifts in ocean carbonate chemistry. The WG will incorporate recommendations from ‘Ocean In High Carbon World-Ocean Acidification international symposium which will be participated by Dr. George (chairman of WG) who will also present a paper on vulnerable deep sea ecosystems to ocean carbonate chemistry, especially seamounts southeast of Australia and New Zealand. The WG plans to develop a follow-on capacity building workshop in the ASLO annual meeting in Hawaii (2017) and in the AGU Ocean Sciences meeting in Portland, Oregon (2018). In 2017, the WG will meet for three days in 2017 at the ASLO annual meeting to generate two open-access publications; 1) the first global assessment of OA on seamount fauna, and 2) a peer-reviewed multi-authored paper to be submitted to NATURE CLIMATE. -
The Aquaculture of Live Rock, Live Sand, Coral and Associated Products
AQUACULTURE OF LIVE ROCKS, LIVE SAND, CORAL AND ASSOCIATED PRODUCTS A DISCUSSION AND DRAFT POLICY PAPER FISHERIES MANAGEMENT PAPER NO. 196 Department of Fisheries 168 St. Georges Terrace Perth WA 6000 April 2006 ISSN 0819-4327 The Aquaculture of Live Rock, Live Sand, Coral and Associated Products A Discussion and Draft Policy Paper Project Managed by Andrew Beer April 2006 Fisheries Management Paper No. 196 ISSN 0819-4327 Fisheries Management Paper No. 196 CONTENTS OPPORTUNITY FOR PUBLIC COMMENT...............................................................IV DISCLAIMER V ACKNOWLEDGEMENT..................................................................................................V SECTION 1 EXECUTIVE SUMMARY & PROPOSED POLICY OPTIONS ....... 1 SECTION 2 INTRODUCTION.................................................................................... 5 2.1 BACKGROUND ............................................................................................. 5 2.2 OBJECTIVES................................................................................................. 5 2.3 WHY LIVE ROCK, SAND AND CORAL AQUACULTURE? ............................... 6 2.4 MARKET...................................................................................................... 6 SECTION 3 THE TAXONOMY AND BIOLOGY OF LIVE ROCK, SAND AND CORAL ..................................................................................................... 9 3.1 LIVE ROCK ................................................................................................. -
CNIDARIA Corals, Medusae, Hydroids, Myxozoans
FOUR Phylum CNIDARIA corals, medusae, hydroids, myxozoans STEPHEN D. CAIRNS, LISA-ANN GERSHWIN, FRED J. BROOK, PHILIP PUGH, ELLIOT W. Dawson, OscaR OcaÑA V., WILLEM VERvooRT, GARY WILLIAMS, JEANETTE E. Watson, DENNIS M. OPREsko, PETER SCHUCHERT, P. MICHAEL HINE, DENNIS P. GORDON, HAMISH J. CAMPBELL, ANTHONY J. WRIGHT, JUAN A. SÁNCHEZ, DAPHNE G. FAUTIN his ancient phylum of mostly marine organisms is best known for its contribution to geomorphological features, forming thousands of square Tkilometres of coral reefs in warm tropical waters. Their fossil remains contribute to some limestones. Cnidarians are also significant components of the plankton, where large medusae – popularly called jellyfish – and colonial forms like Portuguese man-of-war and stringy siphonophores prey on other organisms including small fish. Some of these species are justly feared by humans for their stings, which in some cases can be fatal. Certainly, most New Zealanders will have encountered cnidarians when rambling along beaches and fossicking in rock pools where sea anemones and diminutive bushy hydroids abound. In New Zealand’s fiords and in deeper water on seamounts, black corals and branching gorgonians can form veritable trees five metres high or more. In contrast, inland inhabitants of continental landmasses who have never, or rarely, seen an ocean or visited a seashore can hardly be impressed with the Cnidaria as a phylum – freshwater cnidarians are relatively few, restricted to tiny hydras, the branching hydroid Cordylophora, and rare medusae. Worldwide, there are about 10,000 described species, with perhaps half as many again undescribed. All cnidarians have nettle cells known as nematocysts (or cnidae – from the Greek, knide, a nettle), extraordinarily complex structures that are effectively invaginated coiled tubes within a cell.