Plant SGCN by Habitat Type
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Comparative Gene Mapping in Arabidopsis Lyrata Chromosomes 1 and 2 and the Corresponding A
Genet. Res., Camb. (2006), 87, pp. 75–85. f 2006 Cambridge University Press 75 doi:10.1017/S0016672306008020 Printed in the United Kingdom Comparative gene mapping in Arabidopsis lyrata chromosomes 1 and 2 and the corresponding A. thaliana chromosome 1: recombination rates, rearrangements and centromere location BENGT HANSSON1 #, AKIRA KAWABE1,SONJAPREUSS1, HELMI KUITTINEN2 AND DEBORAH CHARLESWORTH1* 1Institute of Evolutionary Biology, School of Biological Sciences, University of Edinburgh, West Mains Road, Edinburgh EH9 3JT, UK 2 Department of Biology, PL 3000, FIN-90014 University of Oulu, Finland (Received 7 November 2005 and in revised form 23 December 2006) Summary To add detail to the genetic map of Arabidopsis lyrata, and compare it with that of A. thaliana, we have developed many additional markers in the A. lyrata linkage groups, LG1 and LG2, corresponding to A. thaliana chromosome 1. We used a newly developed method for marker development for single nucleotide polymorphisms present in gene sequences, plus length differences, to map genes in an A. lyrata family, including variants in several genes close to the A. thaliana centromere 1, providing the first data on the location of an A. lyrata centromere; we discuss the implications for the evolution of chromosome 1 of A. thaliana. With our larger marker density, large rearrangements between the two Arabidopsis species are excluded, except for a large inversion on LG2. This was previously known in Capsella; its presence in A. lyrata suggests that, like most other rearrangements, it probably arose in the A. thaliana lineage. Knowing that marker orders are similar, we can now compare homologous, non-rearranged map distances to test the prediction of more frequent crossing-over in the more inbreeding species. -
State of New York City's Plants 2018
STATE OF NEW YORK CITY’S PLANTS 2018 Daniel Atha & Brian Boom © 2018 The New York Botanical Garden All rights reserved ISBN 978-0-89327-955-4 Center for Conservation Strategy The New York Botanical Garden 2900 Southern Boulevard Bronx, NY 10458 All photos NYBG staff Citation: Atha, D. and B. Boom. 2018. State of New York City’s Plants 2018. Center for Conservation Strategy. The New York Botanical Garden, Bronx, NY. 132 pp. STATE OF NEW YORK CITY’S PLANTS 2018 4 EXECUTIVE SUMMARY 6 INTRODUCTION 10 DOCUMENTING THE CITY’S PLANTS 10 The Flora of New York City 11 Rare Species 14 Focus on Specific Area 16 Botanical Spectacle: Summer Snow 18 CITIZEN SCIENCE 20 THREATS TO THE CITY’S PLANTS 24 NEW YORK STATE PROHIBITED AND REGULATED INVASIVE SPECIES FOUND IN NEW YORK CITY 26 LOOKING AHEAD 27 CONTRIBUTORS AND ACKNOWLEGMENTS 30 LITERATURE CITED 31 APPENDIX Checklist of the Spontaneous Vascular Plants of New York City 32 Ferns and Fern Allies 35 Gymnosperms 36 Nymphaeales and Magnoliids 37 Monocots 67 Dicots 3 EXECUTIVE SUMMARY This report, State of New York City’s Plants 2018, is the first rankings of rare, threatened, endangered, and extinct species of what is envisioned by the Center for Conservation Strategy known from New York City, and based on this compilation of The New York Botanical Garden as annual updates thirteen percent of the City’s flora is imperiled or extinct in New summarizing the status of the spontaneous plant species of the York City. five boroughs of New York City. This year’s report deals with the City’s vascular plants (ferns and fern allies, gymnosperms, We have begun the process of assessing conservation status and flowering plants), but in the future it is planned to phase in at the local level for all species. -
Concerted Genomic and Epigenomic Changes Accompany Stabilization of Arabidopsis Allopolyploids
ARTICLES https://doi.org/10.1038/s41559-021-01523-y Concerted genomic and epigenomic changes accompany stabilization of Arabidopsis allopolyploids Xinyu Jiang 1, Qingxin Song 1,2, Wenxue Ye 1 and Z. Jeffrey Chen 2 ✉ During evolution successful allopolyploids must overcome ‘genome shock’ between hybridizing species but the underlying pro- cess remains elusive. Here, we report concerted genomic and epigenomic changes in resynthesized and natural Arabidopsis suecica (TTAA) allotetraploids derived from Arabidopsis thaliana (TT) and Arabidopsis arenosa (AA). A. suecica shows con- served gene synteny and content with more gene family gain and loss in the A and T subgenomes than respective progenitors, although A. arenosa-derived subgenome has more structural variation and transposon distributions than A. thaliana-derived subgenome. These balanced genomic variations are accompanied by pervasive convergent and concerted changes in DNA methylation and gene expression among allotetraploids. The A subgenome is hypomethylated rapidly from F1 to resynthesized allotetraploids and convergently to the T-subgenome level in natural A. suecica, despite many other methylated loci being inher- ited from F1 to all allotetraploids. These changes in DNA methylation, including small RNAs, in allotetraploids may affect gene expression and phenotypic variation, including flowering, silencing of self-incompatibility and upregulation of meiosis- and mitosis-related genes. In conclusion, concerted genomic and epigenomic changes may improve stability and adaptation during polyploid evolution. olyploidy or whole-genome duplication (WGD) is a perva- species, including Aly24, Aha25 and Aka26, having been sequenced, sive feature of genome evolution in animals and flowering A. arenosa and A. suecica genomes are unavailable, except for a draft Pplants1–6. -
Creating a Pollinator Garden for Native Specialist Bees of New York and the Northeast
Creating a pollinator garden for native specialist bees of New York and the Northeast Maria van Dyke Kristine Boys Rosemarie Parker Robert Wesley Bryan Danforth From Cover Photo: Additional species not readily visible in photo - Baptisia australis, Cornus sp., Heuchera americana, Monarda didyma, Phlox carolina, Solidago nemoralis, Solidago sempervirens, Symphyotrichum pilosum var. pringlii. These shade-loving species are in a nearby bed. Acknowledgements This project was supported by the NYS Natural Heritage Program under the NYS Pollinator Protection Plan and Environmental Protection Fund. In addition, we offer our appreciation to Jarrod Fowler for his research into compiling lists of specialist bees and their host plants in the eastern United States. Creating a Pollinator Garden for Specialist Bees in New York Table of Contents Introduction _________________________________________________________________________ 1 Native bees and plants _________________________________________________________________ 3 Nesting Resources ____________________________________________________________________ 3 Planning your garden __________________________________________________________________ 4 Site assessment and planning: ____________________________________________________ 5 Site preparation: _______________________________________________________________ 5 Design: _______________________________________________________________________ 6 Soil: _________________________________________________________________________ 6 Sun Exposure: _________________________________________________________________ -
Polygonaceae of Alberta
AN ILLUSTRATED KEY TO THE POLYGONACEAE OF ALBERTA Compiled and writen by Lorna Allen & Linda Kershaw April 2019 © Linda J. Kershaw & Lorna Allen This key was compiled using informaton primarily from Moss (1983), Douglas et. al. (1999) and the Flora North America Associaton (2005). Taxonomy follows VAS- CAN (Brouillet, 2015). The main references are listed at the end of the key. Please let us know if there are ways in which the kay can be improved. The 2015 S-ranks of rare species (S1; S1S2; S2; S2S3; SU, according to ACIMS, 2015) are noted in superscript (S1;S2;SU) afer the species names. For more details go to the ACIMS web site. Similarly, exotc species are followed by a superscript X, XX if noxious and XXX if prohibited noxious (X; XX; XXX) according to the Alberta Weed Control Act (2016). POLYGONACEAE Buckwheat Family 1a Key to Genera 01a Dwarf annual plants 1-4(10) cm tall; leaves paired or nearly so; tepals 3(4); stamens (1)3(5) .............Koenigia islandica S2 01b Plants not as above; tepals 4-5; stamens 3-8 ..................................02 02a Plants large, exotic, perennial herbs spreading by creeping rootstocks; fowering stems erect, hollow, 0.5-2(3) m tall; fowers with both ♂ and ♀ parts ............................03 02b Plants smaller, native or exotic, perennial or annual herbs, with or without creeping rootstocks; fowering stems usually <1 m tall; fowers either ♂ or ♀ (unisexual) or with both ♂ and ♀ parts .......................04 3a 03a Flowering stems forming dense colonies and with distinct joints (like bamboo -
Arabidopsis and Relatives As Models for the Study of Genetic And
Downloaded from http://rstb.royalsocietypublishing.org/ on March 29, 2015 Phil. Trans. R. Soc. B (2010) 365, 1815–1823 doi:10.1098/rstb.2009.0304 Review Arabidopsis and relatives as models for the study of genetic and genomic incompatibilities Kirsten Bomblies† and Detlef Weigel* Department of Molecular Biology, Max Planck Institute for Developmental Biology, 72076 Tu¨bingen, Germany The past few years have seen considerable advances in speciation research, but whether drift or adaptation is more likely to lead to genetic incompatibilities remains unknown. Some of the answers will probably come from not only studying incompatibilities between well-established species, but also from investigating incipient speciation events, to learn more about speciation as an evolutionary process. The genus Arabidopsis, which includes the widely used Arabidopsis thaliana, provides a useful set of model species for studying many aspects of population divergence. The genus contains both self-incompatible and incompatible species, providing a platform for studying the impact of mating system changes on genetic differentiation. Another important path to plant speciation is via formation of polyploids, and this can be investigated in the young allotetraploid species A. arenosa. Finally, there are many cases of intraspecific incompatibilities in A. thaliana, and recent progress has been made in discovering the genes underlying both F1 and F2 breakdown. In the near future, all these studies will be greatly empowered by complete genome sequences not only for all members of this relatively small genus, but also for many different individuals within each species. Keywords: speciation; Arabidopsis; hybrid incompatibility; self-incompatibility; polyploid speciation 1. INTRODUCTION thaliana, provide a useful set of model plants for study- It is widely accepted that a common path to speciation ing several aspects of speciation processes. -
Wetland Value and Function Assessment, Anglican Synod Wetland
Wetland Value and Function Assessment, Anglican Synod Wetland Stantec Consulting Limited 607 Torbay Road St. John’s, NL A1A 4Y6 Tel: (709) 576-1458 Fax: (709) 576-2126 Prepared for Powderhouse Hill Investments Limited. 12 Caldwell Place St. John’s, NL A1E 6A4 Draft Report File No. 121511075 Date: September 27, 2012 WETLAND VALUE AND FUNCTION ASSESSMENT, ANGLICAN SYNOD WETLAND Table of Contents 1.0 INTRODUCTION ............................................................................................................... 1 1.1 Application Contact Information ................................................................................ 1 1.2 Project Scope ........................................................................................................... 1 1.3 Project Objectives ..................................................................................................... 3 1.4 Study Team .............................................................................................................. 3 2.0 WETLANDS, WETLAND VALUES AND FUNCTION AND REGULATORY CONTEXT .... 5 2.1 Wetlands .................................................................................................................. 5 2.2 Wetland Values ........................................................................................................ 5 2.3 Wetland Function ...................................................................................................... 5 2.4 Regulatory Context .................................................................................................. -
Flora of the Carolinas, Virginia, and Georgia, Working Draft of 17 March 2004 -- BIBLIOGRAPHY
Flora of the Carolinas, Virginia, and Georgia, Working Draft of 17 March 2004 -- BIBLIOGRAPHY BIBLIOGRAPHY Ackerfield, J., and J. Wen. 2002. A morphometric analysis of Hedera L. (the ivy genus, Araliaceae) and its taxonomic implications. Adansonia 24: 197-212. Adams, P. 1961. Observations on the Sagittaria subulata complex. Rhodora 63: 247-265. Adams, R.M. II, and W.J. Dress. 1982. Nodding Lilium species of eastern North America (Liliaceae). Baileya 21: 165-188. Adams, R.P. 1986. Geographic variation in Juniperus silicicola and J. virginiana of the Southeastern United States: multivariant analyses of morphology and terpenoids. Taxon 35: 31-75. ------. 1995. Revisionary study of Caribbean species of Juniperus (Cupressaceae). Phytologia 78: 134-150. ------, and T. Demeke. 1993. Systematic relationships in Juniperus based on random amplified polymorphic DNAs (RAPDs). Taxon 42: 553-571. Adams, W.P. 1957. A revision of the genus Ascyrum (Hypericaceae). Rhodora 59: 73-95. ------. 1962. Studies in the Guttiferae. I. A synopsis of Hypericum section Myriandra. Contr. Gray Herbarium Harv. 182: 1-51. ------, and N.K.B. Robson. 1961. A re-evaluation of the generic status of Ascyrum and Crookea (Guttiferae). Rhodora 63: 10-16. Adams, W.P. 1973. Clusiaceae of the southeastern United States. J. Elisha Mitchell Sci. Soc. 89: 62-71. Adler, L. 1999. Polygonum perfoliatum (mile-a-minute weed). Chinquapin 7: 4. Aedo, C., J.J. Aldasoro, and C. Navarro. 1998. Taxonomic revision of Geranium sections Batrachioidea and Divaricata (Geraniaceae). Ann. Missouri Bot. Gard. 85: 594-630. Affolter, J.M. 1985. A monograph of the genus Lilaeopsis (Umbelliferae). Systematic Bot. Monographs 6. Ahles, H.E., and A.E. -
Floristic Quality Assessment Report
FLORISTIC QUALITY ASSESSMENT IN INDIANA: THE CONCEPT, USE, AND DEVELOPMENT OF COEFFICIENTS OF CONSERVATISM Tulip poplar (Liriodendron tulipifera) the State tree of Indiana June 2004 Final Report for ARN A305-4-53 EPA Wetland Program Development Grant CD975586-01 Prepared by: Paul E. Rothrock, Ph.D. Taylor University Upland, IN 46989-1001 Introduction Since the early nineteenth century the Indiana landscape has undergone a massive transformation (Jackson 1997). In the pre-settlement period, Indiana was an almost unbroken blanket of forests, prairies, and wetlands. Much of the land was cleared, plowed, or drained for lumber, the raising of crops, and a range of urban and industrial activities. Indiana’s native biota is now restricted to relatively small and often isolated tracts across the State. This fragmentation and reduction of the State’s biological diversity has challenged Hoosiers to look carefully at how to monitor further changes within our remnant natural communities and how to effectively conserve and even restore many of these valuable places within our State. To meet this monitoring, conservation, and restoration challenge, one needs to develop a variety of appropriate analytical tools. Ideally these techniques should be simple to learn and apply, give consistent results between different observers, and be repeatable. Floristic Assessment, which includes metrics such as the Floristic Quality Index (FQI) and Mean C values, has gained wide acceptance among environmental scientists and decision-makers, land stewards, and restoration ecologists in Indiana’s neighboring states and regions: Illinois (Taft et al. 1997), Michigan (Herman et al. 1996), Missouri (Ladd 1996), and Wisconsin (Bernthal 2003) as well as northern Ohio (Andreas 1993) and southern Ontario (Oldham et al. -
Complete Iowa Plant Species List
!PLANTCO FLORISTIC QUALITY ASSESSMENT TECHNIQUE: IOWA DATABASE This list has been modified from it's origional version which can be found on the following website: http://www.public.iastate.edu/~herbarium/Cofcons.xls IA CofC SCIENTIFIC NAME COMMON NAME PHYSIOGNOMY W Wet 9 Abies balsamea Balsam fir TREE FACW * ABUTILON THEOPHRASTI Buttonweed A-FORB 4 FACU- 4 Acalypha gracilens Slender three-seeded mercury A-FORB 5 UPL 3 Acalypha ostryifolia Three-seeded mercury A-FORB 5 UPL 6 Acalypha rhomboidea Three-seeded mercury A-FORB 3 FACU 0 Acalypha virginica Three-seeded mercury A-FORB 3 FACU * ACER GINNALA Amur maple TREE 5 UPL 0 Acer negundo Box elder TREE -2 FACW- 5 Acer nigrum Black maple TREE 5 UPL * Acer rubrum Red maple TREE 0 FAC 1 Acer saccharinum Silver maple TREE -3 FACW 5 Acer saccharum Sugar maple TREE 3 FACU 10 Acer spicatum Mountain maple TREE FACU* 0 Achillea millefolium lanulosa Western yarrow P-FORB 3 FACU 10 Aconitum noveboracense Northern wild monkshood P-FORB 8 Acorus calamus Sweetflag P-FORB -5 OBL 7 Actaea pachypoda White baneberry P-FORB 5 UPL 7 Actaea rubra Red baneberry P-FORB 5 UPL 7 Adiantum pedatum Northern maidenhair fern FERN 1 FAC- * ADLUMIA FUNGOSA Allegheny vine B-FORB 5 UPL 10 Adoxa moschatellina Moschatel P-FORB 0 FAC * AEGILOPS CYLINDRICA Goat grass A-GRASS 5 UPL 4 Aesculus glabra Ohio buckeye TREE -1 FAC+ * AESCULUS HIPPOCASTANUM Horse chestnut TREE 5 UPL 10 Agalinis aspera Rough false foxglove A-FORB 5 UPL 10 Agalinis gattingeri Round-stemmed false foxglove A-FORB 5 UPL 8 Agalinis paupercula False foxglove -
Don Robinson State Park Species Count: 544
Trip Report for: Don Robinson State Park Species Count: 544 Date: Multiple Visits Jefferson County Agency: MODNR Location: LaBarque Creek Watershed - Vascular Plants Participants: Nels Holmberg, WGNSS, MONPS, Justin Thomas, George Yatskievych This list was compiled by Nels Holmbeg over a period of > 10 years Species Name (Synonym) Common Name Family COFC COFW Acalypha gracilens slender three-seeded mercury Euphorbiaceae 3 5 Acalypha monococca (A. gracilescens var. monococca) one-seeded mercury Euphorbiaceae 3 5 Acalypha rhomboidea rhombic copperleaf Euphorbiaceae 1 3 Acalypha virginica Virginia copperleaf Euphorbiaceae 2 3 Acer rubrum var. undetermined red maple Sapindaceae 5 0 Acer saccharinum silver maple Sapindaceae 2 -3 Achillea millefolium yarrow Asteraceae/Anthemideae 1 3 Actaea pachypoda white baneberry Ranunculaceae 8 5 Adiantum pedatum var. pedatum northern maidenhair fern Pteridaceae Fern/Ally 6 1 Agalinis tenuifolia (Gerardia, A. tenuifolia var. common gerardia Orobanchaceae 4 -3 macrophylla) Ageratina altissima var. altissima (Eupatorium rugosum) white snakeroot Asteraceae/Eupatorieae 2 3 Agrimonia parviflora swamp agrimony Rosaceae 5 -1 Agrimonia pubescens downy agrimony Rosaceae 4 5 Agrimonia rostellata woodland agrimony Rosaceae 4 3 Agrostis perennans upland bent Poaceae/Aveneae 3 1 * Ailanthus altissima tree-of-heaven Simaroubaceae 0 5 * Ajuga reptans carpet bugle Lamiaceae 0 5 Allium canadense var. undetermined wild garlic Liliaceae 2 3 Allium stellatum wild onion Liliaceae 6 5 * Allium vineale field garlic Liliaceae 0 3 Ambrosia artemisiifolia common ragweed Asteraceae/Heliantheae 0 3 Ambrosia bidentata lanceleaf ragweed Asteraceae/Heliantheae 0 4 Amelanchier arborea var. arborea downy serviceberry Rosaceae 6 3 Amorpha canescens lead plant Fabaceae/Faboideae 8 5 Amphicarpaea bracteata hog peanut Fabaceae/Faboideae 4 0 Andropogon gerardii var. -
The Vascular Flora of Boone County, Iowa (2005-2008)
Journal of the Iowa Academy of Science: JIAS Volume 117 Number 1-4 Article 5 2010 The Vascular Flora of Boone County, Iowa (2005-2008) Jimmie D. Thompson Let us know how access to this document benefits ouy Copyright © Copyright 2011 by the Iowa Academy of Science, Inc. Follow this and additional works at: https://scholarworks.uni.edu/jias Part of the Anthropology Commons, Life Sciences Commons, Physical Sciences and Mathematics Commons, and the Science and Mathematics Education Commons Recommended Citation Thompson, Jimmie D. (2010) "The Vascular Flora of Boone County, Iowa (2005-2008)," Journal of the Iowa Academy of Science: JIAS, 117(1-4), 9-46. Available at: https://scholarworks.uni.edu/jias/vol117/iss1/5 This Research is brought to you for free and open access by the Iowa Academy of Science at UNI ScholarWorks. It has been accepted for inclusion in Journal of the Iowa Academy of Science: JIAS by an authorized editor of UNI ScholarWorks. For more information, please contact [email protected]. Jour. Iowa Acad. Sci. 117(1-4):9-46, 2010 The Vascular Flora of Boone County, Iowa (2005-2008) JIMMIE D. THOMPSON 19516 515'h Ave. Ames, Iowa 50014-9302 A vascular plant survey of Boone County, Iowa was conducted from 2005 to 2008 during which 1016 taxa (of which 761, or 75%, are native to central Iowa) were encountered (vouchered and/or observed). A search of literature and the vouchers of Iowa State University's Ada Hayden Herbarium (ISC) revealed 82 additional taxa (of which 57, or 70%, are native to Iowa), unvouchered or unobserved during the current study, as having occurred in the county.