From Synthesis to Applications for Recognition, Molecular Machines, and Supramolecular Catalysis Dawei Zhang, Alexandre Martinez, Jean-Pierre Dutasta
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NBO Applications, 2020
NBO Bibliography 2020 2531 publications – Revised and compiled by Ariel Andrea on Aug. 9, 2021 Aarabi, M.; Gholami, S.; Grabowski, S. J. S-H ... O and O-H ... O Hydrogen Bonds-Comparison of Dimers of Thiocarboxylic and Carboxylic Acids Chemphyschem, (21): 1653-1664 2020. 10.1002/cphc.202000131 Aarthi, K. V.; Rajagopal, H.; Muthu, S.; Jayanthi, V.; Girija, R. Quantum chemical calculations, spectroscopic investigation and molecular docking analysis of 4-chloro- N-methylpyridine-2-carboxamide Journal of Molecular Structure, (1210) 2020. 10.1016/j.molstruc.2020.128053 Abad, N.; Lgaz, H.; Atioglu, Z.; Akkurt, M.; Mague, J. T.; Ali, I. H.; Chung, I. M.; Salghi, R.; Essassi, E.; Ramli, Y. Synthesis, crystal structure, hirshfeld surface analysis, DFT computations and molecular dynamics study of 2-(benzyloxy)-3-phenylquinoxaline Journal of Molecular Structure, (1221) 2020. 10.1016/j.molstruc.2020.128727 Abbenseth, J.; Wtjen, F.; Finger, M.; Schneider, S. The Metaphosphite (PO2-) Anion as a Ligand Angewandte Chemie-International Edition, (59): 23574-23578 2020. 10.1002/anie.202011750 Abbenseth, J.; Goicoechea, J. M. Recent developments in the chemistry of non-trigonal pnictogen pincer compounds: from bonding to catalysis Chemical Science, (11): 9728-9740 2020. 10.1039/d0sc03819a Abbenseth, J.; Schneider, S. A Terminal Chlorophosphinidene Complex Zeitschrift Fur Anorganische Und Allgemeine Chemie, (646): 565-569 2020. 10.1002/zaac.202000010 Abbiche, K.; Acharjee, N.; Salah, M.; Hilali, M.; Laknifli, A.; Komiha, N.; Marakchi, K. Unveiling the mechanism and selectivity of 3+2 cycloaddition reactions of benzonitrile oxide to ethyl trans-cinnamate, ethyl crotonate and trans-2-penten-1-ol through DFT analysis Journal of Molecular Modeling, (26) 2020. -
Biocatalytic Process Design and Reaction Engineering* This Work Is Licensed Under a ** Creative Commons Attribution 4.0 R
R. Wohlgemuth, Biocatalytic Process Design and Reaction Engineering, Chem. Biochem. Eng. Q., 31 (2) 131–138 (2017) 131 Biocatalytic Process Design and Reaction Engineering* This work is licensed under a ** Creative Commons Attribution 4.0 R. Wohlgemuth International License Sigma-Aldrich, Member of Merck Group, doi: 10.15255/CABEQ.2016.1029 Industriestrasse 25, CH-9470 Buchs, Switzerland Review Received: November 2, 2016 Accepted: May 31, 2017 Biocatalytic processes occurring in nature provide a wealth of inspiration for manu- facturing processes with high molecular economy. The molecular and engineering as- pects of bioprocesses converting available raw materials into valuable products are there- fore of much industrial interest. Modular reaction platforms and straightforward working paths, from the fundamental understanding of biocatalytic systems in nature to the design and reaction engineering of novel biocatalytic processes, have been important for short- ening development times. Building on broadly applicable reaction platforms and tools for designing biocatalytic processes and their reaction engineering are key success factors. Process integration and intensification aspects are illustrated with biocatalytic processes to numerous small-molecular weight compounds, which have been prepared by novel and highly selective routes, for applications in the life sciences and biomedical sciences. Key words: molecular economy, retrosynthetic analysis, route selection, biocatalytic asymmetric synthesis, biocatalysts, biocatalytic process assembly, -
Dynamic Approaches Towards Catalyst Discovery
MICROREVIEW DOI: 10.1002/ejoc.200901338 Dynamic Approaches towards Catalyst Discovery Giulio Gasparini,[a] Marta Dal Molin,[a] and Leonard J. Prins*[a] Keywords: Catalyst discovery / Dynamic combinatorial chemistry / Supramolecular catalysis / Noncovalent interactions / Molecular recognition Catalyst development is a challenging task, caused by the tion as it allows for self-assembly and self-selection pro- subtle effects that determine whether a catalyst is efficient or cesses. Synthesis is restricted to the building blocks after not. Success is enhanced by using methodology that relies which diversity is simply generated upon mixing. Self-selec- to a smaller extent on rational design. Combinatorial high- tion of the best catalyst by the target reaction relieves the throughput approaches allow for a systematic exploration of burden of rational design. Molecular systems exhibiting ca- chemical space, but require an easy synthetic access to struc- talysis as an emerging property due to a cooperative inter- turally diverse catalysts. The use of dynamic or reversible play of the molecular components are envisioned for the fu- chemistry for the construction of catalysts is an attractive op- ture. 1. Introduction noncovalent[5] or a combination[6]), to connect these sub- units offers a series of unique advantages and possibilities Catalyst discovery is one of the central themes of chemis- that will be discussed here. try because of the growing need for highly efficient and se- In this review we describe our own contributions in this lective chemical transformations with a low environmental area embedded within the context of other dynamic ap- [1] impact. Catalyst discovery is very challenging as it re- proaches towards catalyst discovery. -
Computational Studies on Host-Guest Catalysis
COMPUTATIONAL STUDIES ON HOST-GUEST CATALYSIS. Charles Goehry Dipòsit Legal: T 1545-2014 ADVERTIMENT. L'accés als continguts d'aquesta tesi doctoral i la seva utilització ha de respectar els drets de la persona autora. Pot ser utilitzada per a consulta o estudi personal, així com en activitats o materials d'investigació i docència en els termes establerts a l'art. 32 del Text Refós de la Llei de Propietat Intel·lectual (RDL 1/1996). Per altres utilitzacions es requereix l'autorització prèvia i expressa de la persona autora. En qualsevol cas, en la utilització dels seus continguts caldrà indicar de forma clara el nom i cognoms de la persona autora i el títol de la tesi doctoral. No s'autoritza la seva reproducció o altres formes d'explotació efectuades amb finalitats de lucre ni la seva comunicació pública des d'un lloc aliè al servei TDX. Tampoc s'autoritza la presentació del seu contingut en una finestra o marc aliè a TDX (framing). Aquesta reserva de drets afecta tant als continguts de la tesi com als seus resums i índexs. ADVERTENCIA. El acceso a los contenidos de esta tesis doctoral y su utilización debe respetar los derechos de la persona autora. Puede ser utilizada para consulta o estudio personal, así como en actividades o materiales de investigación y docencia en los términos establecidos en el art. 32 del Texto Refundido de la Ley de Propiedad Intelectual (RDL 1/1996). Para otros usos se requiere la autorización previa y expresa de la persona autora. En cualquier caso, en la utilización de sus contenidos se deberá indicar de forma clara el nombre y apellidos de la persona autora y el título de la tesis doctoral. -
Nanoparticle As Supramolecular Platform for Delivery and Bioorthogonal Catalysis
University of Massachusetts Amherst ScholarWorks@UMass Amherst Doctoral Dissertations Dissertations and Theses November 2017 NANOPARTICLE AS SUPRAMOLECULAR PLATFORM FOR DELIVERY AND BIOORTHOGONAL CATALYSIS Gulen Yesilbag Tonga University of Massachusetts Amherst Follow this and additional works at: https://scholarworks.umass.edu/dissertations_2 Part of the Materials Chemistry Commons, Medicinal-Pharmaceutical Chemistry Commons, and the Organic Chemistry Commons Recommended Citation Yesilbag Tonga, Gulen, "NANOPARTICLE AS SUPRAMOLECULAR PLATFORM FOR DELIVERY AND BIOORTHOGONAL CATALYSIS" (2017). Doctoral Dissertations. 1141. https://doi.org/10.7275/10521708.0 https://scholarworks.umass.edu/dissertations_2/1141 This Open Access Dissertation is brought to you for free and open access by the Dissertations and Theses at ScholarWorks@UMass Amherst. It has been accepted for inclusion in Doctoral Dissertations by an authorized administrator of ScholarWorks@UMass Amherst. For more information, please contact [email protected]. NANOPARTICLE AS SUPRAMOLECULAR PLATFORM FOR DELIVERY AND BIOORTHOGONAL CATALYSIS A Dissertation Presented by GULEN YESILBAG TONGA Submitted to the Graduate School of the University of Massachusetts Amherst in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY September 2017 Department of Chemistry i © Copyright by Gulen Yesilbag Tonga 2017 All Rights Reserved ii NANOPARTICLE AS SUPRAMOLECULAR PLATFORM FOR DELIVERY AND BIOORTHOGONAL CATALYSIS A Dissertation Presented by GULEN YESILBAG -
Template for Electronic Submission to ACS
© 2014 Carl Andre Denard ENGINEERING NOVEL TANDEM REACTIONS USING ORGANOMETALLIC CATALYSTS AND (METALLO)ENZYMES BY CARL ANDRE DENARD DISSERTATION Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy in Chemical Engineering in the Graduate College of the University of Illinois at Urbana-Champaign, 2014 Urbana, Illinois Doctoral Committee: Professor Huimin Zhao, Chair Professor John F. Hartwig, Co-Chair Professor Hong Yang Professor Paul Kenis Professor Mary Schuler ABSTRACT Catalytic asymmetric synthesis is founded on three pillars: organometallic catalysis, organoca- talysis and biocatalysis. Over the years, catalysts of these three classes have enabled ground- breaking chemical transformations. The application of chemocatalysis to the manufacturing of chemicals is widespread, and biocatalysis is increasingly being used industrially. To streamline chemical syntheses, there has been and continuous to be a push to develop one-pot reactions, within which several catalysts from the same or disciplines are combined to catalyze numerous chemical steps and yield enantiopure products in high yield and selectivity. While this strategy is widespread in the respective fields of chemocatalysis and biocatalysis, examples in which chemocatalysts are combined with biocatalysts in one-pot are few and far between, apart from the seminal works of Backväll and Kim in which metal racemization complexes combined with lipases catalyze dynamic kinetic resolutions. The work presented in this thesis vows to bridge the gap between chemical catalysts and en- zymes by engineering one-pot tandem reactions between these two catalytic systems, with a par- ticular interest on combining cytochrome P450s and enoate reductases with organometallic cata- lysts. On the one hand, considerable efforts in transition-metal catalysis have culminated in prac- tical and efficient transformations such as isomerization, olefin metathesis, carbene-mediated insertions and others. -
Inherently Chiral Calixarenes; Methodology and Applications
Inherently chiral calixarenes; methodology and applications by Dominic Christian Castell Submitted in partial fulfilment of the requirements for the degree Doctor of Philosophy at Stellenbosch University Department of Chemistry and Polymer Science Faculty of Science Supervisor: Dr. G. E. Arnott Date: August 2016 Stellenbosch University https://scholar.sun.ac.za DECLARATION By submitting this thesis electronically, I declare that the entirety of the work contained therein is my own, original work, that I am the owner of the copyright thereof (unless to the extent explicitly stated otherwise) and that I have not previously in its entirety or in part submitted it for obtaining any qualification. ______________________ Signature ______________________ Name in full ______/_____/__________ Date Copyright © 2016 Stellenbosch University All rights reserved i Stellenbosch University https://scholar.sun.ac.za Abstract The use of chiral directing groups has provided an efficient route to meta-functionalised inherently chiral calixarenes. Previously reported ortholithiation methods, incorporating chiral oxazolines have been reexamined, with the aim of revising the individual roles of the three major components of the reaction. The potential mechanistic ramifications of the solvent, additive and alkyllithium structure on the reaction outcomes were individually evaluated. The overarching complexity inherent in this chemistry, coupled with a wide scope of experimental results, point to a number of substrate, solvent and also reagent dependent reaction mechanisms. In addition to the oxazolines, the tert-butyl sulfoxide functional group has also been established as an effective chiral auxiliary for this ortholithiation strategy, yielding enriched diastereomeric mixtures of inherently chiral sulfoxide calixarenes. The absolute stereochemistry of these major and minor products were determined crystallographically. -
Stereoismerism Jeannecrassou
CHIRASKOOL Jeanne Crassous Phosphore et Matériaux Moléculaires http://pmm.univ-rennes1.fr/ Institut des Sciences Chimiques de Rennes UMR CNRS 6226 Université Rennes1, Av. du Général Leclerc 35042 C Rennes Cedex, France, H I [email protected] R A F U N Historical aspects and properties of enantiomers Definitions Symmetry aspects Symmetry point groups for achiral molecules Symmetry point groups for chiral molecules Molecules with stereogenic centers Asymmetric carbon, chiral amines, sulfoxides, phosphines, … Half-sandwich complexes, metallocenes Tetrahedral or spiro-type complexes Octahedral Complexes Molecules displaying axial chirality Examples of allenes Atropoisomerism and axial chirality Planar chirality Inherent chirality Helicenes, fullerenes Trefoil knots and topological chirality Selected examples: stereochemistry of helicene derivatives Some (simplified) history… Bartholin (1669) birefringence Iceland Spar – Spath d’Islande (CaCO3) Malus (1808) Polarization of light Direction of propagation Wave seen Polarization plane by the observer Abbey Haüy (1809) modern crystallography, hemihedry Mitscherlich (1819) polymorphism Arago (1811) Herschel (1820) Hemihedral crystals of quartz They ‘turn the light’ : they have a rotatory power The Biot’s polarimeter (1815) Solutions of camphor, glucose, tartaric acid They ‘turn the light’ : they have a rotatory power (optical rotation) Camphor tree Grapes (tartaric acid) The tartrates by Pasteur (1848) 1820 Kessler (Alsacian chemist) Synthesis of a mysterious acid after refining the -
Parvulescu;García
Document downloaded from: http://hdl.handle.net/10251/147684 This paper must be cited as: Parvulescu, VI.; García Gómez, H. (2018). Heterogeneous catalysis based on supramolecular association. Catalysis Science & Technology. 8(19):4834-4857. https://doi.org/10.1039/c8cy01295d The final publication is available at https://doi.org/10.1039/c8cy01295d Copyright The Royal Society of Chemistry Additional Information Heterogeneous catalysis based on the supramolecular association Vasile I. Parvulescua and Hermenegildo Garcíab a Department of Organic Chemistry, Biochemistry and Catalysis ,Faculty of Chemistry, University of Bucharest, Bdul Regina Elisabeta 4-12, Bucharest 030016, Romania. E-mail: [email protected] b Instituto Universitario de Tecnología Química Consejo Superior de Investigaciones Científicas-Universitat Politecnica de Valencia, Universitat Poliecnica de Valencia, Av. De los Naranjos s/n, 46022 Valencia, Spain. E-mail: [email protected] Abstract. Heterogeneous catalysis is based mostly in materials that built with strong covalent bonds. However, supramolecular aggregation in which individual components self- assemble due to non-covalent interactions to create a larger entity offers also considerable potential for the preparation of materials with application in catalysis. The present article provides a perspective on the use of supramolecular aggregation for the development of heterogeneous catalysts. One of the main advantages of this approach is that the preparation procedure based on spontaneous self-assembly is frequently simpler than those that require the formation of covalent bonds. The emphasis in this article has been made on the use in the preparation of heterogeneous catalyst of carbon materials, particularly graphenes and carbon nantotubes, but also dendrimers and organic capsules. -
Applications of Metal-Organic Frameworks in Heterogeneous Supramolecular Catalysis
Chemical Society Reviews Applications of Metal -Organic Frameworks in Heterogeneous Supramolecular Catalysis Journal: Chemical Society Reviews Manuscript ID: CS-REV-02-2014-000094.R1 Article Type: Review Article Date Submitted by the Author: 07-May-2014 Complete List of Authors: Liu, Jiewei; Sun Yat-Sen University, Chen, Lianfen; Sun Yat-Sen University, Cui, Hao; Sun Yat-Sen University, Zhang, Jianyong; Sun Yat-Sen University, School of Chemistry and Chemical Engineering Zhang, Li; Sun Yat-sen University, School of chemistry and chemical engineering Su, Cheng-Yong; Sun Yat-Sen University, School of Chemistry and Chemical Engineering Page 1 of 52 Chemical Society Reviews Journal Name RSC Publishing ARTICLE Applications of Metal-Organic Frameworks in Heterogeneous Supramolecular Catalysis Cite this: DOI: 10.1039/x0xx00000x Jiewei Liu, Lianfen Chen, Hao Cui, Jianyong Zhang, Li Zhang* and Cheng-Yong Su* Received 00th January 2012, Accepted 00th January 2012 This review summarizes the use of metal-organic frameworks (MOFs) as a versatile supramolecular platform to develop heterogeneous catalysts for a variety of organic reactions, DOI: 10.1039/x0xx00000x especially in liquid-phase reactions. Following a background introduction about catalytic www.rsc.org/ relevance to various metal-organic materials, crystal engineering of MOFs, characterization and evaluation methods of MOF catalysis, we categorize catalytic MOFs based on the types of active sites, including coordinatively unsaturated metal sites (CUMs), metalloligands, functional organic sites (FOS), as well as metal nanoparticles (MNPs) embedded in the cavities. Throughout the review, we emphasize the incidental or deliberate formation of active sites, the stability, heterogeneity and shape/size selectivity for MOF catalysis. Finally, we briefly introduce their relevance to photo- and biomimetic catalysis, and compare MOFs with other typical porous solids such as zeolites and mesoporous silica with regard to their different attributes, and provide our view on future trends and developments of MOF-based catalysis. -
Coronenohelicenes with Dynamic Chirality Corinna Weiss,[A] Dmitry I
Full Paper Chemistry—A European Journal doi.org/10.1002/chem.202001703 & Chirality Coronenohelicenes with Dynamic Chirality Corinna Weiss,[a] Dmitry I. Sharapa,[b] and Andreas Hirsch*[a] Chem. Eur. J. 2020, 26,1–10 1 2020 The Authors. Published by Wiley-VCH GmbH && These are not the final page numbers! ÞÞ Full Paper Chemistry—A European Journal doi.org/10.1002/chem.202001703 Abstract: The synthesis of a new type of chiral and dynamic zation barriers the corresponding double [5]-helicenes re- À1 nonplanar aromatics containing a combination of fused per- vealed activation energies of Ea = 24.81 and 25.38 kcalmol , ylene-based coronenes and helicenes is reported. Either one which is slightly above the barrier of the parent [5]-helicene. or two helicene moieties were fused to the bay regions of Resolution of all possible regio- and stereoisomers allowed an extended perylene core. The target compounds contain for the systematic investigation of the chiroptical properties. either identical or two different helicene building blocks. They revealed remarkable dissymmetry factors IgabsI of up to The combination with two helicene units leads to six differ- 1.210À2, which mirror the synergy between the strong ab- ent isomers, including two pairs of enantiomers and two sorbing perylenes and the inherent chirality of helicenes. meso forms. The experimental determination of the isomeri- Introduction licenes, which are generated by incorporation of heteroatoms into the helicene framework.[5] 3) Combination of helicene The field of nonplanar polyaromatic -
Supramolecular Approaches to Control Activity and Selectivity in Hydroformylation Catalysis
UvA-DARE (Digital Academic Repository) Supramolecular Approaches To Control Activity and Selectivity in Hydroformylation Catalysis Nurttila, S.S.; Linnebank, P.R.; Krachko, T.; Reek, J.N.H. DOI 10.1021/acscatal.8b00288 Publication date 2018 Document Version Final published version Published in ACS Catalysis License CC BY-NC-ND Link to publication Citation for published version (APA): Nurttila, S. S., Linnebank, P. R., Krachko, T., & Reek, J. N. H. (2018). Supramolecular Approaches To Control Activity and Selectivity in Hydroformylation Catalysis. ACS Catalysis, 8(4), 3469-3488. https://doi.org/10.1021/acscatal.8b00288 General rights It is not permitted to download or to forward/distribute the text or part of it without the consent of the author(s) and/or copyright holder(s), other than for strictly personal, individual use, unless the work is under an open content license (like Creative Commons). Disclaimer/Complaints regulations If you believe that digital publication of certain material infringes any of your rights or (privacy) interests, please let the Library know, stating your reasons. In case of a legitimate complaint, the Library will make the material inaccessible and/or remove it from the website. Please Ask the Library: https://uba.uva.nl/en/contact, or a letter to: Library of the University of Amsterdam, Secretariat, Singel 425, 1012 WP Amsterdam, The Netherlands. You will be contacted as soon as possible. UvA-DARE is a service provided by the library of the University of Amsterdam (https://dare.uva.nl) Download date:30 Sep 2021 This is an open access article published under a Creative Commons Non-Commercial No Derivative Works (CC-BY-NC-ND) Attribution License, which permits copying and redistribution of the article, and creation of adaptations, all for non-commercial purposes.