Influence of Sulfur and Cadmium on Antioxidants, Phytochelatins And

Total Page:16

File Type:pdf, Size:1020Kb

Influence of Sulfur and Cadmium on Antioxidants, Phytochelatins And Research Article Influence of sulfur and cadmium on antioxidants, phytochelatins and growth in Indian mustard Humayra Bashir1, Mohamed M. Ibrahim2,3, Rita Bagheri1, Javed Ahmad1, Ibrahim A. Arif2,3, M. Affan Baig1 and M. Irfan Qureshi1* 1 Proteomics and Bioinformatics Lab, Department of Biotechnology, Jamia Millia Islamia, New Delhi 110025, India 2 Department of Botany and Microbiology, Science College, King Saud University, PO Box 2455, Riyadh, Saudi Arabia 3 Department of Botany and Microbiology, Faculty of Science, Alexandria University, PO Box 21511, Alexandria, Egypt Received: 13 August 2014; Accepted: 16 December 2014; Published: 12 January 2015 Associate Editor: Wen-Hao Zhang Citation: Bashir H, Ibrahim MM, Bagheri R, Ahmad J, Arif IA, Baig MA, Qureshi MI. 2015. Influence of sulfur and cadmium on antioxidants, phytochelatins and growth in Indian mustard. AoB PLANTS 7: plv001; doi:10.1093/aobpla/plv001 Abstract. Soils in many parts of the world are contaminated with heavy metals, leading to multiple, deleterious effects on plants and threats to world food production efficiency. Cadmium (Cd) is one such metal, being toxic at rela- tively low concentrations as it is readily absorbed and translocated in plants. Sulfur-rich compounds are critical to the impact of Cd toxicity, enabling plants to increase their cellular defence and/or sequester Cd into vacuoles mediated by phytochelatins (PCs). The influence of sulfur on Cd-induced stress was studied in the hyperaccumulator plant Indian 2− 2− mustard (Brassica juncea) using two sulfur concentrations (+S, 300 mMSO4 and S-deficient 2S, 30 mMSO4 ) with and without the addition of Cd (100 mM CdCl2) at two different time intervals (7 and 14 days after treatment). Com- pared with control plants (+S/2Cd), levels of oxidative stress were higher in S-deficient (2S/2Cd) plants, and greatest in S-deficient Cd-treated (2S/+Cd) plants. However, additional S (+S/+Cd) helped plants cope with oxidative stress. Superoxide dismutase emerged as a key player against Cd stress under both 2S and +S conditions. The activity of ascorbate peroxidase, glutathione reductase and catalase declined in Cd-treated and S-deficient plants, but was up-regulated in the presence of sulfur. Sulfur deficiency mediated a decrease in ascorbate and glutathione (GSH) con- tent but changes in ascorbate (reduced : oxidized) and GSH (reduced : oxidized) ratios were alleviated by sulfur. Our data clearly indicate that a sulfur pool is needed for synthesis of GSH, non-protein thiols and PCs and is also important for growth. Sulfur-based defence mechanisms and the cellular antioxidant pathway, which are critical for tolerance and growth, collapsed as a result of a decline in the sulfur pool. Keywords: Antioxidants; cadmium; growth; oxidative stress; phytochelatins; sulfur. sulfur on agricultural land. Based on crop demand, Introduction fertilizer-use efficiency and current inputs, the worldwide In recent years, sulfur deficiency has become a major sulfur-deficit has been estimated to be 10.4 million problem for agricultural productivity, reducing both crop tonnes annually (Haneklaus et al. 2007). Increased food quality and yields. Legitimate approaches to reducing production will further raise sulfur requirements, elevat- emissions of sulfur into the atmosphere have resulted ing this sulfur-deficit to 12.5 million tonnes by 2015 in a concomitant decrease in atmospheric deposition of (Randazzo 2009). * Corresponding author’s e-mail address: [email protected]; [email protected] Published by Oxford University Press on behalf of the Annals of Botany Company. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/ licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. AoB PLANTS www.aobplants.oxfordjournals.org & The Authors 2015 1 Bashir et al. — Synergistic effects of S-deficiency and Cd on mustard As an essential macronutrient required for the proper reported that Cd induces the production of thiol com- growth and development of plants, sulfur plays a critical pounds and transcripts of the S-assimilation pathway. It role in a number of cellular processes, such as in protein is noteworthy that a PC-deficient Arabidopsis thaliana disulfide bridges (Saito 2000), mediating electron trans- mutant, cad1, exhibits Cd, As and Zn hypersensitivity port in iron–sulfur (Fe–S) clusters, the redox cycle, detoxi- (Cobbett and Goldsbrough 2002; Tennstedt et al. 2009). fication of heavy metals and xenobiotics, vitamin Cadmium activates the S-assimilation pathway respon- co-factors (Hell and Hillebrand 2001) and the metabolism sible for the synthesis of cysteine (Cys), a precursor of of secondary products (Hell 1997; Saito 2000). Sulfur is thus GSH biosynthesis. Glutathione (an NPT) acts as an import- a major plant nutrient (Takahashi et al. 1997; Leustek et al. ant antioxidant in mitigating Cd-induced stress (Meuwly 2000; Saito 2000; Lee and Korban 2002) that contributes to and Rauser 1992). It also plays an important role in PC an increase in crop yield, directly adding nutritional value synthesis, which has a proven role in Cd detoxification and improving the efficiency of use of other essential plant (Park et al. 2012). nutrients (Salvagiotti et al.2009), particularly nitrogen and Plants are also provided with an efficient mechanism phosphorus. Research on plant adaptations to S-related for protection against ROS and peroxidation reactions. stresses has shifted from an emphasis on excessive inputs The majority of ROS-scavenging pathways in plants and acidification to how deficiencies impact crop produc- involve superoxide dismutase (SOD), which is found in tion. Sulfur deficiency not only impacts crop quality and almost all cellular compartments, the water–water cycle yield, but it also raises the demand for adequate fertiliza- in chloroplasts and the ascorbic acid (AsA)–GSH cycle in tion to resist biotic and abiotic stresses. Exposure of plants chloroplasts, cytosol, mitochondria, apoplast and peroxi- to excessive toxic metals like cadmium (Cd) may affect the somes, in which ascorbate peroxidase (APX) and GR play uptake and metabolism of S and negatively impact the crucial roles. Catalase (CAT) removes H2O2 in peroxisomes yield and plant resistance to abiotic stresses (Gill and (Mittler 2002). Tuteja 2011). A varying degree of antioxidative response and toler- Cadmium is a non-essential heavy metal that is readily ance is exhibited by different plant species. Several studies absorbed and rapidly translocated in plants, which makes have demonstrated that most of the main S-responsive it highly bio-available and thus toxic, even at relatively low genes involved in sulfate assimilation are induced by Cd, concentrations. Cadmium exerts its phytotoxicity by inter- suggesting the existence of a general adaptive response fering with several basic events of plant growth, develop- to an increase in cellular demand for reduced S (Nocito ment and physiology (Qadir et al.2004). Cadmium induces et al.2006). Hence the availability of S to plants is crucial. oxidative stress leading to the overproduction of harmful Brassica juncea (L.) Czern. (Indian Mustard) belongs to reactive oxygen species (ROS) (Zhang et al. 2010). These the Brassicaceae family and is an important oilseed crop ROS may cause damage to cell membranes, proteins, that is known to tolerate considerable amounts of Cd DNA replication and repair. A major effect of this metal, (Qadir et al. 2004). In this study, we investigated the observed in most plants studied to date, is the inhibition effects of Cd, S-deficiency and their combination on of photosynthesis by altering chlorophyll synthesis (Pietrini S-assisted defence against oxidative stress, and changes et al.2003; Maksymiec and Krupa 2006) and the light- in cellular antioxidant activity, the contents of NPTs, PCs harvesting Chl a/Chl b protein complex II (Qureshi et al. and photosynthetic pigments, and growth parameters 2010), and interfering with RuBisCO activation (Prasad in B. juncea. 1995). Therefore, Cd-mediated reductions in photosyn- thetic activity lead to declines in crop yield (Ouzounidou Methods et al. 1997). Cadmium also interferes with processes such as carbohydrate and nitrogen metabolism (Sanita` di Toppi Experimental design and Gabbrielli 1999), enzyme catalysis (Van Assche and Seeds of mustard (B. juncea cv. Pusa Jaikisan), procured Clijsters 1990) and water balance (Perfus-Barbeoch et al. from the Indian Agriculture Research Institute (IARI), 2002). were treated with 1 % (v/v) sodium hypochlorite solution Sulfur plays a critical role in allowing plants to protect for 10 min followed by thorough washing in deionized themselves against heavy metal toxicity, especially Cd water. The seeds were germinated on moist soil (Soilritew; toxicity (Gill and Tuteja 2011). Numerous studies have 1 kg per pot). For S-nutrition, conditions were as described shown that S is involved in the biosynthesis of heavy in Abdallah et al. (2010). One set of plant cultures, consid- metal detoxification agents (Anjum et al. 2012), such as ered as the control, received Hoagland nutrient solution 2− non-protein thiols (NPTs) including phytochelatins (PCs), (Hoagland and Arnon 1950) with 300 mMSO4 (herein glutathione (GSH) (Noctor et al. 2011) and Cd -sulfide referred to as ‘S-sufficient’) and was designated as (+S). crystallites (Robinson et al. 1993). Harada et al. (2002) A second set received the same
Recommended publications
  • Revisiting Sulphur—The Once Neglected Nutrient: It's Roles in Plant Growth, Metabolism, Stress Tolerance and Crop Production
    agriculture Review Revisiting Sulphur—The Once Neglected Nutrient: It’s Roles in Plant Growth, Metabolism, Stress Tolerance and Crop Production Tinashe Zenda 1,2,3,4 , Songtao Liu 1,2,3, Anyi Dong 1,2,3 and Huijun Duan 1,2,3,* 1 State Key Laboratory of North China Crop Improvement and Regulation, Hebei Agricultural University, Baoding 071001, China; [email protected] (T.Z.); [email protected] (S.L.); [email protected] (A.D.) 2 North China Key Laboratory for Crop Germplasm Resources of the Education Ministry, Hebei Agricultural University, Baoding 071001, China 3 Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding 071001, China 4 Department of Crop Science, Faculty of Agriculture and Environmental Sciences, Bindura University of Science Education, Bindura P. Bag 1020, Zimbabwe * Correspondence: [email protected]; Tel.: +86-139-3127-9716 Abstract: Sulphur plays crucial roles in plant growth and development, with its functions ranging from being a structural constituent of macro-biomolecules to modulating several physiological processes and tolerance to abiotic stresses. In spite of these numerous sulphur roles being well acknowledged, agriculture has paid scant regard for sulphur nutrition, until only recently. Serious problems related to soil sulphur deficiencies have emerged and the intensification of food, fiber, and animal production is escalating to feed the ever-increasing human population. In the wake of huge Citation: Zenda, T.; Liu, S.; Dong, A.; demand for high quality cereal and vegetable diets, sulphur can play a key role in augmenting the Duan, H. Revisiting Sulphur—The production, productivity, and quality of crops.
    [Show full text]
  • From Sulfur to Homoglutathione: Thiol Metabolism in Soybean
    Amino Acids (2010) 39:963–978 DOI 10.1007/s00726-010-0572-9 REVIEW ARTICLE From sulfur to homoglutathione: thiol metabolism in soybean Hankuil Yi • Geoffrey E. Ravilious • Ashley Galant • Hari B. Krishnan • Joseph M. Jez Received: 19 December 2009 / Accepted: 16 March 2010 / Published online: 3 April 2010 Ó Springer-Verlag 2010 Abstract Sulfur is an essential plant nutrient and is soybean genome may guide the next steps in exploring this metabolized into the sulfur-containing amino acids (cys- biochemical system. teine and methionine) and into molecules that protect plants against oxidative and environmental stresses. Keywords Soybean Á Sulfur Á Cysteine Á Glutathione Á Although studies of thiol metabolism in the model plant Homoglutathione Á Metabolism Á Seed Á Biotechnology Á Arabidopsis thaliana (thale cress) have expanded our Food and feed understanding of these dynamic processes, our knowledge of how sulfur is assimilated and metabolized in crop plants, such as soybean (Glycine max), remains limited in com- Overview parison. Soybean is a major crop used worldwide for food and animal feed. Although soybeans are protein-rich, they Amino acid metabolism in plants not only provides basic do not contain high levels of the sulfur-containing amino metabolic building blocks for small molecules and pro- acids, cysteine and methionine. Ultimately, unraveling the teins, but also is a critical determinant of both the nutri- fundamental steps and regulation of thiol metabolism in tional composition of plants and the value of crops for food soybean is important for optimizing crop yield and quality. and feed purposes (Jez and Fukagawa 2008). For normal Here we review the pathways from sulfur uptake to glu- plant growth, sulfur, along with nitrogen, phosphorus, and tathione and homoglutathione synthesis in soybean, the potassium, is an essential nutrient.
    [Show full text]
  • The Eruca Sativa Genome and Transcriptome
    bioRxiv preprint doi: https://doi.org/10.1101/2019.12.23.886937; this version posted December 23, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 FRONT MATTER 2 3 Title 4 The Eruca sativa genome and transcriptome: A targeted analysis of sulfur metabolism and 5 glucosinolate biosynthesis pre and postharvest 6 7 Authors 8 Luke Bell 1*, Martin Chadwick 2, Manik Puranik 2, Richard Tudor 3, Lisa Methven 2, Sue 9 Kennedy 3, Carol Wagstaff 2 10 11 Affiliations 12 1 School of Agriculture, Policy & Development, PO Box 237, University of Reading, 13 Whiteknights, Reading, Berkshire. RG6 6AR. UK. 14 15 2 School of Chemistry Food & Pharmacy, PO Box 226, University of Reading, 16 Whiteknights, Reading, Berkshire. RG6 6AP. UK. 17 18 3 Elsoms Seeds Ltd., Pinchbeck Road, Spalding, Lincolnshire. PE11 1QG. UK. 19 20 * [email protected] 21 22 Abstract 23 Rocket (Eruca sativa) is a source of health-related metabolites called glucosinolates (GSLs) 24 and isothiocyanates (ITCs) but little is known of the genetic and transcriptomic mechanisms 25 responsible for regulating pre and postharvest accumulations. We present the first de novo reference 26 genome assembly and annotation, with ontogenic and postharvest transcriptome data relating to 27 sulfur assimilation, transport, and utilization. Diverse gene expression patterns related to sulfur 28 metabolism and GSL biosynthesis are present between inbred lines of rocket.
    [Show full text]
  • Effect of Sulphur Application and Water Salinity on Soil and Plant Properties
    Vol. 10(2), pp. 29-38, February 2019 DOI: 10.5897/JSSEM2018.0625 Articles Number: 4FB200760067 ISSN: 2141-2391 Copyright ©2019 Journal of Soil Science and Environmental Author(s) retain the copyright of this article http://www.academicjournals.org/JSSEM Management Full Length Research Paper Effect of Sulphur application and water salinity on soil and plant properties Ahmed Ibrahim Mohamed*, Ahmed Osman Mohamed and Ozories Mohamed Ali Soil and Water Department, Faculty of Agriculture, Suez Canal University, Ismailia, Egypt. Received 25 March 2017; Accepted 19 May 2017 The main objective of this work was to study the effect of sulphur application and irrigation water quality on some soil properties of the calcareous, alluvial and sandy soils. A lysimeter experiment was conducted and filled with calcareous, alluvial and sandy soils to evaluate the impact of using elemental sulfur on the yields and mineral uptake of wheat plant. The experiment was cultivated with wheat plant (Triticum Vulgare L.), and irrigated by saline water (diluted sea water recording EC values of 2000, 3000 and 4000 mgl-1). The rate of sulfur applications were 0, 476 and 952 kg Sha-1. The results showed that increasing salinity to 4000 mgl-1 gradually and significantly decreased the fresh and dry weights of wheat were as follow: Sandy > alluvial > calcareous soils, and the reductions in the grain yield under the same condition were 27, 15 and 23% relative to the control for calcareous, alluvial and sandy soils, respectively. Salinity levels also significantly reduced the total uptake of NPK of all crops cultivated in different soils under study.
    [Show full text]
  • Plant Sulphur Metabolism Is Stimulated by Photorespiration
    ARTICLE https://doi.org/10.1038/s42003-019-0616-y OPEN Plant sulphur metabolism is stimulated by photorespiration Cyril Abadie1,2 & Guillaume Tcherkez 1* 1234567890():,; Intense efforts have been devoted to describe the biochemical pathway of plant sulphur (S) assimilation from sulphate. However, essential information on metabolic regulation of S assimilation is still lacking, such as possible interactions between S assimilation, photo- synthesis and photorespiration. In particular, does S assimilation scale with photosynthesis thus ensuring sufficient S provision for amino acids synthesis? This lack of knowledge is problematic because optimization of photosynthesis is a common target of crop breeding and furthermore, photosynthesis is stimulated by the inexorable increase in atmospheric CO2. Here, we used high-resolution 33S and 13C tracing technology with NMR and LC-MS to access direct measurement of metabolic fluxes in S assimilation, when photosynthesis and photorespiration are varied via the gaseous composition of the atmosphere (CO2,O2). We show that S assimilation is stimulated by photorespiratory metabolism and therefore, large photosynthetic fluxes appear to be detrimental to plant cell sulphur nutrition. 1 Research School of Biology, Australian National University, Canberra, ACT 2601, Australia. 2Present address: IRHS (Institut de Recherche en Horticulture et Semences), UMR 1345, INRA, Agrocampus-Ouest, Université d’Angers, SFR 4207 QuaSaV, 49071 Angers, Beaucouzé, France. *email: guillaume. [email protected] COMMUNICATIONS BIOLOGY
    [Show full text]
  • Chapter 12 Assimilation of Mineral Nutrients
    Chapter 12 Assimilation of Mineral Nutrients BIOL 5130/6130 Bob Locy Auburn University Chapter 12.01. Introduction - 01 Chapter 12.02. Nitrogen in the Environment - 02 02.01. Nitrogen passes through several forms in a biogeochemical cycle Chapter 12.02. Nitrogen in the Environment - 03 02.02. Unassimilated ammonium or nitrate may be dangerous – Although nitrate and ammonium are preferred nitrogen sources to support plant growth and development, both substances can be toxic at highlevels. – Ammonium ion dissipates the proton gradient – Nitrate can geneate toxic biproducts. Chapter 12.03. Nitrate Assimilation - 04 - + - + NO3 + NAD(P)H + H NO2 + NAD(P) + H20 03.01a. Many factors regulate nitrate reductase – Tight control of NR activity is required to keep toxic levels of nitrite from accumulating in cells – The induction of nitrate reductase activity is regulated transcriptionally by the control of NR mRNA levels. Chapter 12.03. Nitrate Assimilation - 05 03.01b. Many factors regulate nitrate reductase – Nitrate reductase activity is also regulated posttranslationally by a number of physiological parameters. – This control involves activating 14-3-3 protein, and phosphorylation of a serine residue in the hinge region of the protein between the MoCo and the heme. – Phosphorylation activates and dephosphorylation inhibits NR activity. Chapter 12.03. Nitrate Assimilation - 06 03.02. Nitrite reductase converts nitrite to ammonium - + + NO2 + 6 Fdred + 8 H NH4 + 6 Fdox + 2H20 – Nitrite derived from nitrate reductase is immediately taken up by choroplasts (in leaves) or plastids (in roots), where it is reduced to amonia by nitrite reductase (Nit) Chapter 12.03. Nitrate Assimilation - 07 03.03. Both roots and shoots assimilate nitrate – Varies from one species to another – GENERALLY – temperate species are root assimilators, tropical species are leaf assimilators Chapter 12.04.
    [Show full text]
  • Plant Sulfur Metabolism — the Reduction of Sulfate to Sulfite Julie Ann Bick and Thomas Leustek∗
    240 Plant sulfur metabolism Ð the reduction of sulfate to sul®te Julie Ann Bick and Thomas Leustek∗ Until recently the pathway by which plants reduce activated matter of contention and is the focus of this review. sulfate to sul®te was unresolved. Recent ®ndings on two Skipping this step for the moment, the remaining reactions enzymes termed 5′-adenylylsulfate (APS) sulfotransferase and in the pathway to cysteine include the reduction of APS reductase have provided new information on this topic. sul®te to sul®de catalyzed by ferredoxin-dependent sul®te On the basis of their similarities it is now proposed that these reductase [6], then assimilation of inorganic sul®de by proteins are the same enzyme. These discoveries con®rm that the sulfhydration of O-acetylserine [7••]. The second the sulfate assimilation pathway in plants differs from that in assimilation pathway branching from APS is used for the other sulfate assimilating organisms. synthesis of a variety of sulfated compounds carried out by speci®c sulfotransferases (ST's). These enzymes use the phosphorylated derivative of APS, 3-phosphoadenosine- Addresses 5′-phosphosulfate (PAPS)[4••,5••], formed by APS kinase Biotechnology Center for Agriculture and the Environment, Rutgers University, 59 Dudley Road, Foran Hall, New Brunswick, New Jersey (AK). 08901-8520 USA ∗e-mail: [email protected] This paper focuses on the latest information on the Current Opinion in Plant Biology 1998, 1:240±244 enzyme catalyzing the reduction of APS. The recent puri®cation of APSSTase from a marine alga provides the http://biomednet.com/elecref/1369526600100240 ®rst evidence on the catalytic properties of this enzyme.
    [Show full text]
  • Effects of Organic Compost, Gypsum, and Topdress Sulfur Rates on Bioactive Compounds and Physicochemical Characteristics of Collard Greens
    VOL. 16, NUM. 9 2020 www.scientiaplena.org.br doi: 10.14808/sci.plena.2020.090201 Effects of organic compost, gypsum, and topdress sulfur rates on bioactive compounds and physicochemical characteristics of collard greens Compostos bioativos e caracterização físico-química da couve-de-folha sob composto orgânico, gessagem e doses de enxofre em cobertura M. D. Nasser1*; A. I. I. Cardoso2; R. L. Vieites2; F. A. C. M. Nasser2; K. A. Furlaneto2; J. A. Ramos2; P. K. Caetano2; J. A. Santos2 1Polo Regional Alta Paulista, Agência Paulista de Tecnologia dos Agronegócios, APTA, 17800-000, Adamantina - SP, Brasil 2Departamento de Horticultura, Universidade Estadual Paulista "Júlio de Mesquita Filho" (UNESP), 18610-034, Botucatu-SP, Brasil * [email protected] (Recebido em 10 de outubro de 2019; aceito em 18 de setembro de 2020) This study evaluates the use of sulfur, gypsum, and organic compost as to their effects on bioactive compounds and physicochemical characteristics of collard greens. Twelve treatments were assessed in randomized blocks in a split-plot scheme, where the main plots received three types of soil amendments (pre- planting incorporation of organic compost; gypsum; and organic compost + gypsum), and the subplots received four rates of topdress-applied sulfur (0; 80; 160; and 240 kg ha-1 of S). Flavonoid bioactive compounds, total antioxidant activity, and total phenolic compounds were evaluated. The physicochemical characteristics assessed were: reducing sugars, total sugars, sucrose, soluble solids, pH, titratable acidity, fiber, protein, pigments (chlorophyll a, b, anthocyanins, and total carotenoids), and the relative chlorophyll index (SPAD index). The treatment whose soil was prepared with organic compost and a topdressing of sulfur from ammonium sulfate increased the flavonoid content in the collard plants.
    [Show full text]
  • Studying the Microbiome of Cyanobacterial Biocrusts from Drylands and Its Functional Infuence on Biogeochemical Cycles
    Studying the Microbiome of Cyanobacterial Biocrusts From Drylands and Its Functional Inuence on Biogeochemical Cycles Isabel Miralles ( [email protected] ) University of Almería Raúl Ortega University of Almería Maria Carmen Montero-Calasanz Newcastle University Research Article Keywords: desert biome, soil bacterial taxa, shotgun, bacterial functions, MG-RAST, MicrobiomeAnalyst Posted Date: February 24th, 2021 DOI: https://doi.org/10.21203/rs.3.rs-252045/v1 License: This work is licensed under a Creative Commons Attribution 4.0 International License. Read Full License Page 1/51 Abstract Background: Drylands are areas under continuous degradation and desertication largely covered by cyanobacterial biocrusts. Several studies have already shown that soil microorganisms play a fundamental role in the correct soil functioning. Nevertheless, little is known about the relationship taxonomy-function in arid soils and, in particular, in cyanobacterial biocrusts. An in-depth study of the taxonomic composition and the functions carried out by soil microorganisms in biogeochemical cycles was here carried out by using a shotgun metagenomic approach. Results: Metagenomic analysis carried out in this study showed a high taxonomic and functional similarity in both incipient and mature cyanobacterial biocrusts types with a dominance of Proteobacteria, Actinobacteria and Cyanobacteria. The predominant functional categories related to soil biogeochemical cycles were “carbon metabolism” followed by “phosphorus, nitrogen, sulfur, potassium and iron metabolism”. Reads involved in the metabolism of carbohydrates and respiration were the most abundant functional classes. In the N cycle dominated “ammonia assimilation” and “Nitrate and nitrite ammonication”. The major taxonomic groups also seemed to drive phosphorus and potassium cycling by the production of organic acids and the presence of extracellular enzymes and specialised transporters.
    [Show full text]
  • Mitigating Soil Salinity Stress with Gypsum and Bio-Organic Amendments: a Review
    agronomy Review Mitigating Soil Salinity Stress with Gypsum and Bio-Organic Amendments: A Review Suleiman K. Bello 1,2,* , Abdullah H. Alayafi 1, Samir G. AL-Solaimani 1 and Kamal A. M. Abo-Elyousr 1,3 1 Department of Arid Land Agriculture, Faculty of Meteorology, Environment and Arid Land Agriculture, King Abdul-Aziz University, Jeddah 80200, Saudi Arabia; alayafi[email protected] (A.H.A.); [email protected] (S.G.A.-S.); [email protected] (K.A.M.A.-E.) 2 Department of Soil Science, Faculty of Agriculture/Institute for Agricultural Research, Ahmadu Bello University, Zaria P.M.B. 1044, Kaduna State, Nigeria 3 Department of Plant Pathology, Faculty of Agriculture, University of Assiut, Assiut 71526, Egypt * Correspondence: [email protected]; Tel.: +966-572006973 Abstract: Salinity impedes soil and crop productivity in over 900 million ha of arable lands worldwide due to the excessive accumulation of salt (NaCl). To utilize saline soils in agriculture, halophytes (salt-tolerant plants) are commonly cultivated. However, most food crops are glycophytes (salt-sensitive). Thus, to enhance the productivity of saline soils, gypsum (CaSO4·2H2O) as well as bio-organic (combined use of organic materials, such as compost and straw with the inoculation of beneficial microbes) amendments have been continuously recognized to improve the biological, physical and chemical + 2+ properties of saline soils. CaSO4·2H2O regulates the exchange of sodium (Na ) for calcium (Ca ) on the clay surfaces, thereby increasing the Ca2+/Na+ ratio in the soil solution. Intracellularly, Ca2+ also promotes a higher K+/Na+ ratio. Simultaneously, gypsum furnishes crops with sulfur (S) for enhanced growth and yield through the increased production of phytohormones, amino acids, glutathione and osmoprotectants, which are vital elicitors in plants’ responses to salinity stress.
    [Show full text]
  • The Role of 50-Adenylylsulfate Reductase in the Sulfur Assimilation Pathway of Soybean: Molecular Cloning, Kinetic Characterization, and Gene Expression
    Available online at www.sciencedirect.com PHYTOCHEMISTRY Phytochemistry 69 (2008) 356–364 www.elsevier.com/locate/phytochem The role of 50-adenylylsulfate reductase in the sulfur assimilation pathway of soybean: Molecular cloning, kinetic characterization, and gene expression Pallavi Phartiyal a, Won-Seok Kim b, Rebecca E. Cahoon c, Joseph M. Jez c, Hari B. Krishnan a,b,* a Department of Agronomy, University of Missouri, Columbia, MO 65211, USA b Plant Genetics Research Unit, USDA-Agricultural Research Service, University of Missouri, Columbia, MO 65211, USA c Donald Danforth Plant Science Center, St. Louis, MO 63132, USA Received 19 February 2007; received in revised form 28 June 2007 Available online 29 August 2007 Abstract Soybean seeds are a major source of protein, but contain low levels of sulfur-containing amino acids. With the objective of studying the sulfur assimilation pathway of soybean, a full-length cDNA clone for 50-adenylylsulfate reductase (APS reductase) was isolated and characterized. The cDNA clone contained an open reading frame of 1414 bp encoding a 52 kDa protein with a N-terminal chloroplast/ plastid transit peptide. Southern blot analysis of genomic DNA indicated that the APS reductase in soybean is encoded by a small multi- gene family. Biochemical characterization of the heterologously expressed and purified protein shows that the clone encoded a functional APS reductase. Although expressed in tissues throughout the plant, these analyses established an abundant expression of the gene and activity of the encoded protein in the early developmental stages of soybean seed, which declined with seed maturity. Sulfur and phos- phorus deprivation increased this expression level, while nitrogen starvation repressed APS reductase mRNA transcript and protein lev- els.
    [Show full text]
  • Sulfur Homeostasis in Plants
    International Journal of Molecular Sciences Review Sulfur Homeostasis in Plants ,§ ,§ Qian Li y , Yan Gao z and An Yang * State Key Laboratory of Vegetation and Environmental Change, Institute of Botany, The Chinese Academy of Sciences, Beijing 100093, China; [email protected] (Q.L.); [email protected] (Y.G.) * Correspondence: [email protected] Current address: College of Horticulture, Northwest A&F University, Yangling 712100, Shaanxi, China. y Current address: Duolun County Grassland Management Station, Inner Mongolia Autonomous Region, z Duolun 027300, Inner Mongolia, China. § These authors contributed equally to this work. Received: 2 November 2020; Accepted: 20 November 2020; Published: 25 November 2020 Abstract: Sulfur (S) is an essential macronutrient for plant growth and development. S is majorly absorbed as sulfate from soil, and is then translocated to plastids in leaves, where it is assimilated into organic products. Cysteine (Cys) is the first organic product generated from S, and it is used as a precursor to synthesize many S-containing metabolites with important biological functions, such as glutathione (GSH) and methionine (Met). The reduction of sulfate takes place in a two-step reaction involving a variety of enzymes. Sulfate transporters (SULTRs) are responsible for the 2 2 absorption of SO4 − from the soil and the transport of SO4 − in plants. There are 12–16 members in the S transporter family, which is divided into five categories based on coding sequence homology and biochemical functions. When exposed to S deficiency, plants will alter a series of morphological and physiological processes. Adaptive strategies, including cis-acting elements, transcription factors, non-coding microRNAs, and phytohormones, have evolved in plants to respond to S deficiency.
    [Show full text]