Deep-Sea Hydrothermal Vent Communities C
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Diversity of Bacteria and Archaea in the Deep-Sea Low-Temperature Hydrothermal Sulfide Chimney of the Northeastern Pacific Ocean
African Journal of Biotechnology Vol. 11(2), pp. 337-345, 5 January, 2012 Available online at http://www.academicjournals.org/AJB DOI: 10.5897/AJB11.2692 ISSN 1684–5315 © 2012 Academic Journals Full Length Research Paper Diversity of bacteria and archaea in the deep-sea low-temperature hydrothermal sulfide chimney of the Northeastern Pacific Ocean Xia Ding1*, Xiao-Jue Peng1#, Xiao-Tong Peng2 and Huai-Yang Zhou3 1College of Life Sciences and Key Laboratory of Poyang Lake Environment and Resource Utilization, Ministry of Education, Nanchang University, Nanchang 330031, China. 2Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou 510640, China. 3National Key Laboratory of Marine Geology, Tongji University, Shanghai 200092, China. Accepted 4 November, 2011 Our knowledge of the diversity and role of hydrothermal vents microorganisms has considerably expanded over the past decade, while little is known about the diversity of microorganisms in low-temperature hydrothermal sulfide chimney. In this study, denaturing gradient gel electrophoresis (DGGE) and 16S rDNA sequencing were used to examine the abundance and diversity of microorganisms from the exterior to the interior of the deep sea low-temperature hydrothermal sulfide chimney of the Northeastern Pacific Ocean. DGGE profiles revealed that both bacteria and archaea could be examined in all three zones of the chimney wall and the compositions of microbial communities within different zones were vastly different. Overall, for archaea, cell abundance was greatest in the outermost zone of the chimney wall. For bacteria, there was no significant difference in cell abundance among three zones. In addition, phylogenetic analysis revealed that Verrucomicrobia and Deltaproteobacteria were the predominant bacterial members in exterior zone, beta Proteobacteria were the dominant members in middle zone, and Bacillus were the abundant microorganisms in interior zone. -
Sponge–Microbe Interactions on Coral Reefs: Multiple Evolutionary Solutions to a Complex Environment
fmars-08-705053 July 14, 2021 Time: 18:29 # 1 REVIEW published: 20 July 2021 doi: 10.3389/fmars.2021.705053 Sponge–Microbe Interactions on Coral Reefs: Multiple Evolutionary Solutions to a Complex Environment Christopher J. Freeman1*, Cole G. Easson2, Cara L. Fiore3 and Robert W. Thacker4,5 1 Department of Biology, College of Charleston, Charleston, SC, United States, 2 Department of Biology, Middle Tennessee State University, Murfreesboro, TN, United States, 3 Department of Biology, Appalachian State University, Boone, NC, United States, 4 Department of Ecology and Evolution, Stony Brook University, Stony Brook, NY, United States, 5 Smithsonian Tropical Research Institute, Panama City, Panama Marine sponges have been successful in their expansion across diverse ecological niches around the globe. Pioneering work attributed this success to both a well- developed aquiferous system that allowed for efficient filter feeding on suspended organic matter and the presence of microbial symbionts that can supplement host Edited by: heterotrophic feeding with photosynthate or dissolved organic carbon. We now know Aldo Cróquer, The Nature Conservancy, that sponge-microbe interactions are host-specific, highly nuanced, and provide diverse Dominican Republic nutritional benefits to the host sponge. Despite these advances in the field, many current Reviewed by: hypotheses pertaining to the evolution of these interactions are overly generalized; these Ryan McMinds, University of South Florida, over-simplifications limit our understanding of the evolutionary processes shaping these United States symbioses and how they contribute to the ecological success of sponges on modern Alejandra Hernandez-Agreda, coral reefs. To highlight the current state of knowledge in this field, we start with seminal California Academy of Sciences, United States papers and review how contemporary work using higher resolution techniques has Torsten Thomas, both complemented and challenged their early hypotheses. -
Tube Worm Riftia Pachyptila to Severe Hypoxia
l MARINE ECOLOGY PROGRESS SERIES Vol. 174: 151-158,1998 Published November 26 Mar Ecol Prog Ser Metabolic responses of the hydrothermal vent tube worm Riftia pachyptila to severe hypoxia Cordelia ~rndt',~.*,Doris Schiedek2,Horst Felbeckl 'University of California San Diego, Scripps Institution of Oceanography. La Jolla. California 92093-0202. USA '~alticSea Research Institute at the University of Rostock, Seestrasse 15. D-181 19 Rostock-Warnemuende. Germany ABSTRACT: The metabolic capabilit~esof the hydrothermal vent tube worm Riftia pachyptila to toler- ate short- and long-term exposure to hypoxia were investigated After incubating specimens under anaerobic conditions the metabolic changes in body fluids and tissues were analyzed over time. The tube worms tolerated anoxic exposure up to 60 h. Prior to hypoxia the dicarboxylic acid, malate, was found in unusually high concentrations in the blood (up to 26 mM) and tissues (up to 5 pm01 g-' fresh wt). During hypoxia, most of the malate was degraded very quickly, while large quantities of succinate accumulated (blood: about 17 mM; tissues: about 13 pm01 g-l fresh wt). Volatile, short-chain fatty acids were apparently not excreted under these conditions. The storage compound, glycogen, was mainly found in the trophosome and appears to be utilized only during extended anaerobiosis. The succinate formed during hypoxia does not account for the use of malate and glycogen, which possibly indicates the presence of yet unidentified metabolic end products. Glutamate concentration in the trophosome decreased markedly durlng hypoxia, presumably due to a reduction in the autotrophic function of the symb~ontsduring hypoxia. In conclusion, R. pachyptila is phys~ologicallywell adapted to the oxygen fluctuations freq.uently occurring In the vent habitat. -
Hydrothermal Vents. Teacher's Notes
Hydrothermal Vents Hydrothermal Vents. Teacher’s notes. A hydrothermal vent is a fissure in a planet's surface from which geothermally heated water issues. They are usually volcanically active. Seawater penetrates into fissures of the volcanic bed and interacts with the hot, newly formed rock in the volcanic crust. This heated seawater (350-450°) dissolves large amounts of minerals. The resulting acidic solution, containing metals (Fe, Mn, Zn, Cu) and large amounts of reduced sulfur and compounds such as sulfides and H2S, percolates up through the sea floor where it mixes with the cold surrounding ocean water (2-4°) forming mineral deposits and different types of vents. In the resulting temperature gradient, these minerals provide a source of energy and nutrients to chemoautotrophic organisms that are, thus, able to live in these extreme conditions. This is an extreme environment with high pressure, steep temperature gradients, and high concentrations of toxic elements such as sulfides and heavy metals. Black and white smokers Some hydrothermal vents form a chimney like structure that can be as 60m tall. They are formed when the minerals that are dissolved in the fluid precipitates out when the super-heated water comes into contact with the freezing seawater. The minerals become particles with high sulphur content that form the stack. Black smokers are very acidic typically with a ph. of 2 (around that of vinegar). A black smoker is a type of vent found at depths typically below 3000m that emit a cloud or black material high in sulphates. White smokers are formed in a similar way but they emit lighter-hued minerals, for example barium, calcium and silicon. -
EXPLORING DEEP SEA HYDROTHERMAL VENTS on EARTH and OCEAN WORLDS. P. Sobron1,2, L. M. Barge3, the Invader Team. 1Impossible Sensing, St
52nd Lunar and Planetary Science Conference 2021 (LPI Contrib. No. 2548) 2505.pdf EXPLORING DEEP SEA HYDROTHERMAL VENTS ON EARTH AND OCEAN WORLDS. P. Sobron1,2, L. M. Barge3, the InVADER Team. 1Impossible Sensing, St. Louis, MO ([email protected]) 2SETI Institute, Mtn. View, CA, , 3Jet Propulsion Laboratory, Pasadena, CA The Mission: InVADER (In-situ Vent Analysis precipitates showing exposed minerals and organic Divebot for Exobiology Research, Figure 4.1, content. The UNOLS ROV will use our coring tool and https://invader-mission.org/) is NASA’s most advanced its own manipulator and cameras to take ground truth subsea sensing payload, a tightly integrated imaging and samples as part of the InVADER deplotment. laser Raman spectroscopy/laser-induced breakdown In contrast to existing methods, InVADER allows spectroscopy/laser induced native fluorescence in-situ, autonomous, non-destructive measurements of instrument capable of in-situ, rapid, long-term these vent characteristics. InVADER will fill these gaps, underwater analyses of vent fluid and precipitates. and advance readiness in vent exploration on Earth and Such analyses are critical for finding and studying Ocean Worlds by simplifying operational strategies for life and life’s precursors at vent systems on Ocean identifying and characterizing seafloor environments. Worlds. To demonstrate the scientific potential and We will use statistical analysis tools for the fusion of functionality of the instrument, in July 2021 our team multi-sensor datasets, and develop real-time science will deploy InVADER on the Ocean Observatories data evaluation and payload control routines to Initiative’s (OOI) Regional Cabled Array (RCA), a establish, and then validate, adaptive science operations power/data distribution network off the Oregon coast, at strategies that maximize science return in a mission-like the underwater hydrothermal systems of Axial scenario. -
Significant Dissipation of Tidal Energy in the Deep Ocean Inferred from Satellite Altimeter Data
letters to nature 3. Rein, M. Phenomena of liquid drop impact on solid and liquid surfaces. Fluid Dynamics Res. 12, 61± water is created at high latitudes12. It has thus been suggested that 93 (1993). much of the mixing required to maintain the abyssal strati®cation, 4. Fukai, J. et al. Wetting effects on the spreading of a liquid droplet colliding with a ¯at surface: experiment and modeling. Phys. Fluids 7, 236±247 (1995). and hence the large-scale meridional overturning, occurs at 5. Bennett, T. & Poulikakos, D. Splat±quench solidi®cation: estimating the maximum spreading of a localized `hotspots' near areas of rough topography4,16,17. Numerical droplet impacting a solid surface. J. Mater. Sci. 28, 963±970 (1993). modelling studies further suggest that the ocean circulation is 6. Scheller, B. L. & Bous®eld, D. W. Newtonian drop impact with a solid surface. Am. Inst. Chem. Eng. J. 18 41, 1357±1367 (1995). sensitive to the spatial distribution of vertical mixing . Thus, 7. Mao, T., Kuhn, D. & Tran, H. Spread and rebound of liquid droplets upon impact on ¯at surfaces. Am. clarifying the physical mechanisms responsible for this mixing is Inst. Chem. Eng. J. 43, 2169±2179, (1997). important, both for numerical ocean modelling and for general 8. de Gennes, P. G. Wetting: statics and dynamics. Rev. Mod. Phys. 57, 827±863 (1985). understanding of how the ocean works. One signi®cant energy 9. Hayes, R. A. & Ralston, J. Forced liquid movement on low energy surfaces. J. Colloid Interface Sci. 159, 429±438 (1993). source for mixing may be barotropic tidal currents. -
DEEP SEA LEBANON RESULTS of the 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project
DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project March 2018 DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project Citation: Aguilar, R., García, S., Perry, A.L., Alvarez, H., Blanco, J., Bitar, G. 2018. 2016 Deep-sea Lebanon Expedition: Exploring Submarine Canyons. Oceana, Madrid. 94 p. DOI: 10.31230/osf.io/34cb9 Based on an official request from Lebanon’s Ministry of Environment back in 2013, Oceana has planned and carried out an expedition to survey Lebanese deep-sea canyons and escarpments. Cover: Cerianthus membranaceus © OCEANA All photos are © OCEANA Index 06 Introduction 11 Methods 16 Results 44 Areas 12 Rov surveys 16 Habitat types 44 Tarablus/Batroun 14 Infaunal surveys 16 Coralligenous habitat 44 Jounieh 14 Oceanographic and rhodolith/maërl 45 St. George beds measurements 46 Beirut 19 Sandy bottoms 15 Data analyses 46 Sayniq 15 Collaborations 20 Sandy-muddy bottoms 20 Rocky bottoms 22 Canyon heads 22 Bathyal muds 24 Species 27 Fishes 29 Crustaceans 30 Echinoderms 31 Cnidarians 36 Sponges 38 Molluscs 40 Bryozoans 40 Brachiopods 42 Tunicates 42 Annelids 42 Foraminifera 42 Algae | Deep sea Lebanon OCEANA 47 Human 50 Discussion and 68 Annex 1 85 Annex 2 impacts conclusions 68 Table A1. List of 85 Methodology for 47 Marine litter 51 Main expedition species identified assesing relative 49 Fisheries findings 84 Table A2. List conservation interest of 49 Other observations 52 Key community of threatened types and their species identified survey areas ecological importanc 84 Figure A1. -
Microbial Community and Geochemical Analyses of Trans-Trench Sediments for Understanding the Roles of Hadal Environments
The ISME Journal (2020) 14:740–756 https://doi.org/10.1038/s41396-019-0564-z ARTICLE Microbial community and geochemical analyses of trans-trench sediments for understanding the roles of hadal environments 1 2 3,4,9 2 2,10 2 Satoshi Hiraoka ● Miho Hirai ● Yohei Matsui ● Akiko Makabe ● Hiroaki Minegishi ● Miwako Tsuda ● 3 5 5,6 7 8 2 Juliarni ● Eugenio Rastelli ● Roberto Danovaro ● Cinzia Corinaldesi ● Tomo Kitahashi ● Eiji Tasumi ● 2 2 2 1 Manabu Nishizawa ● Ken Takai ● Hidetaka Nomaki ● Takuro Nunoura Received: 9 August 2019 / Revised: 20 November 2019 / Accepted: 28 November 2019 / Published online: 11 December 2019 © The Author(s) 2019. This article is published with open access Abstract Hadal trench bottom (>6000 m below sea level) sediments harbor higher microbial cell abundance compared with adjacent abyssal plain sediments. This is supported by the accumulation of sedimentary organic matter (OM), facilitated by trench topography. However, the distribution of benthic microbes in different trench systems has not been well explored yet. Here, we carried out small subunit ribosomal RNA gene tag sequencing for 92 sediment subsamples of seven abyssal and seven hadal sediment cores collected from three trench regions in the northwest Pacific Ocean: the Japan, Izu-Ogasawara, and fi 1234567890();,: 1234567890();,: Mariana Trenches. Tag-sequencing analyses showed speci c distribution patterns of several phyla associated with oxygen and nitrate. The community structure was distinct between abyssal and hadal sediments, following geographic locations and factors represented by sediment depth. Co-occurrence network revealed six potential prokaryotic consortia that covaried across regions. Our results further support that the OM cycle is driven by hadal currents and/or rapid burial shapes microbial community structures at trench bottom sites, in addition to vertical deposition from the surface ocean. -
Biodiversity and Trophic Ecology of Hydrothermal Vent Fauna Associated with Tubeworm Assemblages on the Juan De Fuca Ridge
Biogeosciences, 15, 2629–2647, 2018 https://doi.org/10.5194/bg-15-2629-2018 © Author(s) 2018. This work is distributed under the Creative Commons Attribution 4.0 License. Biodiversity and trophic ecology of hydrothermal vent fauna associated with tubeworm assemblages on the Juan de Fuca Ridge Yann Lelièvre1,2, Jozée Sarrazin1, Julien Marticorena1, Gauthier Schaal3, Thomas Day1, Pierre Legendre2, Stéphane Hourdez4,5, and Marjolaine Matabos1 1Ifremer, Centre de Bretagne, REM/EEP, Laboratoire Environnement Profond, 29280 Plouzané, France 2Département de sciences biologiques, Université de Montréal, C.P. 6128, succursale Centre-ville, Montréal, Québec, H3C 3J7, Canada 3Laboratoire des Sciences de l’Environnement Marin (LEMAR), UMR 6539 9 CNRS/UBO/IRD/Ifremer, BP 70, 29280, Plouzané, France 4Sorbonne Université, UMR7144, Station Biologique de Roscoff, 29680 Roscoff, France 5CNRS, UMR7144, Station Biologique de Roscoff, 29680 Roscoff, France Correspondence: Yann Lelièvre ([email protected]) Received: 3 October 2017 – Discussion started: 12 October 2017 Revised: 29 March 2018 – Accepted: 7 April 2018 – Published: 4 May 2018 Abstract. Hydrothermal vent sites along the Juan de Fuca community structuring. Vent food webs did not appear to be Ridge in the north-east Pacific host dense populations of organised through predator–prey relationships. For example, Ridgeia piscesae tubeworms that promote habitat hetero- although trophic structure complexity increased with ecolog- geneity and local diversity. A detailed description of the ical successional stages, showing a higher number of preda- biodiversity and community structure is needed to help un- tors in the last stages, the food web structure itself did not derstand the ecological processes that underlie the distribu- change across assemblages. -
I. Türkiye Derin Deniz Ekosistemi Çaliştayi Bildiriler Kitabi 19 Haziran 2017
I. TÜRKİYE DERİN DENİZ EKOSİSTEMİ ÇALIŞTAYI BİLDİRİLER KİTABI 19 HAZİRAN 2017 İstanbul Üniversitesi, Su Bilimleri Fakültesi, Gökçeada Deniz Araştırmaları Birimi, Çanakkale, Gökçeada EDİTÖRLER ONUR GÖNÜLAL BAYRAM ÖZTÜRK NURİ BAŞUSTA Bu kitabın bütün hakları Türk Deniz Araştırmaları Vakfı’na aittir. İzinsiz basılamaz, çoğaltılamaz. Kitapta bulunan makalelerin bilimsel sorumluluğu yazarlarına aittir. All rights are reserved. No part of this publication may be reproduced, stored in a retrieval system, or transmitted in any form or by any means without the prior permission from the Turkish Marine Research Foundation. Copyright © Türk Deniz Araştırmaları Vakfı ISBN-978-975-8825-37-0 Kapak fotoğrafları: Mustafa YÜCEL, Bülent TOPALOĞLU, Onur GÖNÜLAL Kaynak Gösterme: GÖNÜLAL O., ÖZTÜRK B., BAŞUSTA N., (Ed.) 2017. I. Türkiye Derin Deniz Ekosistemi Çalıştayı Bildiriler Kitabı, Türk Deniz Araştırmaları Vakfı, İstanbul, Türkiye, TÜDAV Yayın no: 45 Türk Deniz Araştırmaları Vakfı (TÜDAV) P. K: 10, Beykoz / İstanbul, TÜRKİYE Tel: 0 216 424 07 72, Belgegeçer: 0 216 424 07 71 Eposta: [email protected] www.tudav.org ÖNSÖZ Dünya denizlerinde 200 metre derinlikten sonra başlayan bölgeler ‘Derin Deniz’ veya ‘Deep Sea’ olarak bilinir. Son 50 yılda sualtı teknolojisindeki gelişmelere bağlı olarak birçok ulus bu bilinmeyen deniz ortamlarını keşfetmek için yarışırken yeni cihazlar denemekte ayrıca yeni türler keşfetmektedirler. Özellikle Amerika, İngiltere, Kanada, Japonya başta olmak üzere birçok ülke derin denizlerin keşfi yanında derin deniz madenciliğine de ilgi göstermektedirler. Daha şimdiden Yeni Gine izin ve ruhsatlandırma işlemlerine başladı bile. Bütün bunlar olurken ülkemizde bu konuda çalışan uzmanları bir araya getirerek sinerji oluşturma görevini yine TÜDAV üstlendi. Memnuniyetle belirtmek gerekir ki bu çalıştay amacına ulaşmış 17 değişik kurumdan 30 uzman değişik konularda bildiriler sunarak konuya katkı sunmuşlardır. -
Ocean-Climate.Org
ocean-climate.org THE INTERACTIONS BETWEEN OCEAN AND CLIMATE 8 fact sheets WITH THE HELP OF: Authors: Corinne Bussi-Copin, Xavier Capet, Bertrand Delorme, Didier Gascuel, Clara Grillet, Michel Hignette, Hélène Lecornu, Nadine Le Bris and Fabrice Messal Coordination: Nicole Aussedat, Xavier Bougeard, Corinne Bussi-Copin, Louise Ras and Julien Voyé Infographics: Xavier Bougeard and Elsa Godet Graphic design: Elsa Godet CITATION OCEAN AND CLIMATE, 2016 – Fact sheets, Second Edition. First tome here: www.ocean-climate.org With the support of: ocean-climate.org HOW DOES THE OCEAN WORK? OCEAN CIRCULATION..............................………….....………................................……………….P.4 THE OCEAN, AN INDICATOR OF CLIMATE CHANGE...............................................…………….P.6 SEA LEVEL: 300 YEARS OF OBSERVATION.....................……….................................…………….P.8 The definition of words starred with an asterisk can be found in the OCP little dictionnary section, on the last page of this document. 3 ocean-climate.org (1/2) OCEAN CIRCULATION Ocean circulation is a key regulator of climate by storing and transporting heat, carbon, nutrients and freshwater all around the world . Complex and diverse mechanisms interact with one another to produce this circulation and define its properties. Ocean circulation can be conceptually divided into two Oceanic circulation is very sensitive to the global freshwater main components: a fast and energetic wind-driven flux. This flux can be described as the difference between surface circulation, and a slow and large density-driven [Evaporation + Sea Ice Formation], which enhances circulation which dominates the deep sea. salinity, and [Precipitation + Runoff + Ice melt], which decreases salinity. Global warming will undoubtedly lead Wind-driven circulation is by far the most dynamic. to more ice melting in the poles and thus larger additions Blowing wind produces currents at the surface of the of freshwaters in the ocean at high latitudes. -
Reproductive Ecology of Vestimentifera (Polychaeta: Siboglinidae) from Hydrothermal Vents and Cold Seeps
University of Southampton Research Repository ePrints Soton Copyright © and Moral Rights for this thesis are retained by the author and/or other copyright owners. A copy can be downloaded for personal non-commercial research or study, without prior permission or charge. This thesis cannot be reproduced or quoted extensively from without first obtaining permission in writing from the copyright holder/s. The content must not be changed in any way or sold commercially in any format or medium without the formal permission of the copyright holders. When referring to this work, full bibliographic details including the author, title, awarding institution and date of the thesis must be given e.g. AUTHOR (year of submission) "Full thesis title", University of Southampton, name of the University School or Department, PhD Thesis, pagination http://eprints.soton.ac.uk University of Southampton Reproductive Ecology of Vestimentifera (Polychaeta: Siboglinidae) from Hydrothermal Vents and Cold Seeps PhD Dissertation submitted by Ana Hil´ario to the Graduate School of the National Oceanography Centre, Southampton in partial fulfillment of the requirements for the degree of Doctor of Philosophy June 2005 Graduate School of the National Oceanography Centre, Southampton This PhD dissertation by Ana Hil´ario has been produced under the supervision of the following persons Supervisors Prof. Paul Tyler and Dr Craig Young Chair of Advisory Panel Dr Martin Sheader Member of Advisory Panel Dr Jonathan Copley I hereby declare that no part of this thesis has been submitted for a degree to the University of Southampton, or any other University, at any time previously. The material included is the work of the author, except where expressly stated.