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Development and Evaluation of Rrna Targeted in Situ Probes and Phylogenetic Relationships of Freshwater Fungi
Development and evaluation of rRNA targeted in situ probes and phylogenetic relationships of freshwater fungi vorgelegt von Diplom-Biologin Christiane Baschien aus Berlin Von der Fakultät III - Prozesswissenschaften der Technischen Universität Berlin zur Erlangung des akademischen Grades Doktorin der Naturwissenschaften - Dr. rer. nat. - genehmigte Dissertation Promotionsausschuss: Vorsitzender: Prof. Dr. sc. techn. Lutz-Günter Fleischer Berichter: Prof. Dr. rer. nat. Ulrich Szewzyk Berichter: Prof. Dr. rer. nat. Felix Bärlocher Berichter: Dr. habil. Werner Manz Tag der wissenschaftlichen Aussprache: 19.05.2003 Berlin 2003 D83 Table of contents INTRODUCTION ..................................................................................................................................... 1 MATERIAL AND METHODS .................................................................................................................. 8 1. Used organisms ............................................................................................................................. 8 2. Media, culture conditions, maintenance of cultures and harvest procedure.................................. 9 2.1. Culture media........................................................................................................................... 9 2.2. Culture conditions .................................................................................................................. 10 2.3. Maintenance of cultures.........................................................................................................10 -
Annotated Check List and Host Index Arizona Wood
Annotated Check List and Host Index for Arizona Wood-Rotting Fungi Item Type text; Book Authors Gilbertson, R. L.; Martin, K. J.; Lindsey, J. P. Publisher College of Agriculture, University of Arizona (Tucson, AZ) Rights Copyright © Arizona Board of Regents. The University of Arizona. Download date 28/09/2021 02:18:59 Link to Item http://hdl.handle.net/10150/602154 Annotated Check List and Host Index for Arizona Wood - Rotting Fungi Technical Bulletin 209 Agricultural Experiment Station The University of Arizona Tucson AÏfJ\fOTA TED CHECK LI5T aid HOST INDEX ford ARIZONA WOOD- ROTTlNg FUNGI /. L. GILßERTSON K.T IyIARTiN Z J. P, LINDSEY3 PRDFE550I of PLANT PATHOLOgY 2GRADUATE ASSISTANT in I?ESEARCI-4 36FZADAATE A5 S /STANT'" TEACHING Z z l'9 FR5 1974- INTRODUCTION flora similar to that of the Gulf Coast and the southeastern United States is found. Here the major tree species include hardwoods such as Arizona is characterized by a wide variety of Arizona sycamore, Arizona black walnut, oaks, ecological zones from Sonoran Desert to alpine velvet ash, Fremont cottonwood, willows, and tundra. This environmental diversity has resulted mesquite. Some conifers, including Chihuahua pine, in a rich flora of woody plants in the state. De- Apache pine, pinyons, junipers, and Arizona cypress tailed accounts of the vegetation of Arizona have also occur in association with these hardwoods. appeared in a number of publications, including Arizona fungi typical of the southeastern flora those of Benson and Darrow (1954), Nichol (1952), include Fomitopsis ulmaria, Donkia pulcherrima, Kearney and Peebles (1969), Shreve and Wiggins Tyromyces palustris, Lopharia crassa, Inonotus (1964), Lowe (1972), and Hastings et al. -
Spore Prints
SPORE PRINTS BULLETIN OF THE PUGET SOUND MYCOLOGICAL SOCIETY Number 473 June 2011 OLDEST, ODDEST FUNGI FINALLY “The big message here is that most fungi and most fungal diversity PHOTOGRAPHED Susan Milius reside in fungi that have neither been collected nor cultivated,” Science News, May 12, 2011 says John W. Taylor of the University of California, Berkeley. Exeter team member Meredith Jones spotted the hard-to-detect organisms by marking them with fluorescent tags. The trick re- vealed fungal cells attached to algal cells as if parasitizing them. M. Jones One of the big questions about early fungi is whether they might have arisen from “some kind of parasitic ancestor like Rozella,” says Rytas Vilgalys of Duke University. Interesting, yes. But loosening the definition of fungi to include organisms without chitin walls could wreak havoc in the concept of that group, objects Robert Lücking of the Field Museum in Chicago. “I would actually conclude, based on the evidence, that these are not fungi,” he says. Instead, they might be near rela- tives—an almost-fungus. Two fungal cells, possibly from an ancient lineage, each show a curvy, taillike flagellum (red) during a mobile stage in their life cycle. IS MUTATED FUNGUS KILLING AMERICAN BATS? Andy Coghlan Images of little dots, some wriggling a skinny tail, give scientists New Scientist, May 24, 2011 a first glimpse of a vast swath of the oldest, and perhaps oddest, fungal group alive today. A fungus blamed for killing more than a mil- The first views suggest that, unlike any other fungi known, these lion bats in the US since 2006 has been found might live as essentially naked cells without the rigid cell wall to differ only slightly from an apparently that supposedly defines a fungus, says Tom Richards of the Natu- harmless European version. -
Download The
METHODS FOR DESCRIBING DISTRIBUTION OF SOUNDWOOD IN MATURE WESTERN HEMLOCK TREES by DONALD D. MONRO B.S.F„, University, of British Columbia, 1960 M.S., Oregon State University, 1964 A THESIS SUBMITTED IN PARTIAL FULFILMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY in the Department of FORESTRY We accept this thesis as conforming to the required standard . THE UNIVERSITY OF BRITISH COLUMBIA May, 1968 In presenting this thesis in partial fulfilment of the requirements for an advanced degree at the University of British Columbia, I agree that the Library shall make it freely available for reference and Study. I further agree that permission for extensive copying of this thesis for scholarly purposes may be granted by the Head of my Department or by hiis representatives. It is understood that copying or publication of this thesis for financial gain shall not be allowed without my written permission. Department of The University of British Columbia Vancouver^ 8, Canada . ABSTRACT Supervisor: Professor J. H. G. Smith Estimation of soundwood volume and value is particularly important in British Columbia because nearly half of the forests are overmature or decadent. The objective of this thesis was to develop -analytical techniques to define distribution of gross and net volumes within individual standing trees in order that appropriate reductions for decay could be made for estimates of volumes of logs of specified sizes and grades. Relationships of heartr-ot to stand and tree characteristics and to external abnormalities were analysed for 369 western hemlock (Tsuga heterophilla (Rafn.) Sarg.) trees from the Yale Public Sustained Yield Unit in British Columbia. -
Molecular Identification of Fungi
Molecular Identification of Fungi Youssuf Gherbawy l Kerstin Voigt Editors Molecular Identification of Fungi Editors Prof. Dr. Youssuf Gherbawy Dr. Kerstin Voigt South Valley University University of Jena Faculty of Science School of Biology and Pharmacy Department of Botany Institute of Microbiology 83523 Qena, Egypt Neugasse 25 [email protected] 07743 Jena, Germany [email protected] ISBN 978-3-642-05041-1 e-ISBN 978-3-642-05042-8 DOI 10.1007/978-3-642-05042-8 Springer Heidelberg Dordrecht London New York Library of Congress Control Number: 2009938949 # Springer-Verlag Berlin Heidelberg 2010 This work is subject to copyright. All rights are reserved, whether the whole or part of the material is concerned, specifically the rights of translation, reprinting, reuse of illustrations, recitation, broadcasting, reproduction on microfilm or in any other way, and storage in data banks. Duplication of this publication or parts thereof is permitted only under the provisions of the German Copyright Law of September 9, 1965, in its current version, and permission for use must always be obtained from Springer. Violations are liable to prosecution under the German Copyright Law. The use of general descriptive names, registered names, trademarks, etc. in this publication does not imply, even in the absence of a specific statement, that such names are exempt from the relevant protective laws and regulations and therefore free for general use. Cover design: WMXDesign GmbH, Heidelberg, Germany, kindly supported by ‘leopardy.com’ Printed on acid-free paper Springer is part of Springer Science+Business Media (www.springer.com) Dedicated to Prof. Lajos Ferenczy (1930–2004) microbiologist, mycologist and member of the Hungarian Academy of Sciences, one of the most outstanding Hungarian biologists of the twentieth century Preface Fungi comprise a vast variety of microorganisms and are numerically among the most abundant eukaryotes on Earth’s biosphere. -
The Fungi of Slapton Ley National Nature Reserve and Environs
THE FUNGI OF SLAPTON LEY NATIONAL NATURE RESERVE AND ENVIRONS APRIL 2019 Image © Visit South Devon ASCOMYCOTA Order Family Name Abrothallales Abrothallaceae Abrothallus microspermus CY (IMI 164972 p.p., 296950), DM (IMI 279667, 279668, 362458), N4 (IMI 251260), Wood (IMI 400386), on thalli of Parmelia caperata and P. perlata. Mainly as the anamorph <it Abrothallus parmeliarum C, CY (IMI 164972), DM (IMI 159809, 159865), F1 (IMI 159892), 2, G2, H, I1 (IMI 188770), J2, N4 (IMI 166730), SV, on thalli of Parmelia carporrhizans, P Abrothallus parmotrematis DM, on Parmelia perlata, 1990, D.L. Hawksworth (IMI 400397, as Vouauxiomyces sp.) Abrothallus suecicus DM (IMI 194098); on apothecia of Ramalina fustigiata with st. conid. Phoma ranalinae Nordin; rare. (L2) Abrothallus usneae (as A. parmeliarum p.p.; L2) Acarosporales Acarosporaceae Acarospora fuscata H, on siliceous slabs (L1); CH, 1996, T. Chester. Polysporina simplex CH, 1996, T. Chester. Sarcogyne regularis CH, 1996, T. Chester; N4, on concrete posts; very rare (L1). Trimmatothelopsis B (IMI 152818), on granite memorial (L1) [EXTINCT] smaragdula Acrospermales Acrospermaceae Acrospermum compressum DM (IMI 194111), I1, S (IMI 18286a), on dead Urtica stems (L2); CY, on Urtica dioica stem, 1995, JLT. Acrospermum graminum I1, on Phragmites debris, 1990, M. Marsden (K). Amphisphaeriales Amphisphaeriaceae Beltraniella pirozynskii D1 (IMI 362071a), on Quercus ilex. Ceratosporium fuscescens I1 (IMI 188771c); J1 (IMI 362085), on dead Ulex stems. (L2) Ceriophora palustris F2 (IMI 186857); on dead Carex puniculata leaves. (L2) Lepteutypa cupressi SV (IMI 184280); on dying Thuja leaves. (L2) Monographella cucumerina (IMI 362759), on Myriophyllum spicatum; DM (IMI 192452); isol. ex vole dung. (L2); (IMI 360147, 360148, 361543, 361544, 361546). -
Preliminary Classification of Leotiomycetes
Mycosphere 10(1): 310–489 (2019) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/10/1/7 Preliminary classification of Leotiomycetes Ekanayaka AH1,2, Hyde KD1,2, Gentekaki E2,3, McKenzie EHC4, Zhao Q1,*, Bulgakov TS5, Camporesi E6,7 1Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, Yunnan, China 2Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand 3School of Science, Mae Fah Luang University, Chiang Rai, 57100, Thailand 4Landcare Research Manaaki Whenua, Private Bag 92170, Auckland, New Zealand 5Russian Research Institute of Floriculture and Subtropical Crops, 2/28 Yana Fabritsiusa Street, Sochi 354002, Krasnodar region, Russia 6A.M.B. Gruppo Micologico Forlivese “Antonio Cicognani”, Via Roma 18, Forlì, Italy. 7A.M.B. Circolo Micologico “Giovanni Carini”, C.P. 314 Brescia, Italy. Ekanayaka AH, Hyde KD, Gentekaki E, McKenzie EHC, Zhao Q, Bulgakov TS, Camporesi E 2019 – Preliminary classification of Leotiomycetes. Mycosphere 10(1), 310–489, Doi 10.5943/mycosphere/10/1/7 Abstract Leotiomycetes is regarded as the inoperculate class of discomycetes within the phylum Ascomycota. Taxa are mainly characterized by asci with a simple pore blueing in Melzer’s reagent, although some taxa have lost this character. The monophyly of this class has been verified in several recent molecular studies. However, circumscription of the orders, families and generic level delimitation are still unsettled. This paper provides a modified backbone tree for the class Leotiomycetes based on phylogenetic analysis of combined ITS, LSU, SSU, TEF, and RPB2 loci. In the phylogenetic analysis, Leotiomycetes separates into 19 clades, which can be recognized as orders and order-level clades. -
Rp Lexikon Web Arten
Dumontinia tuberosa Pilzportrait Fungi, Dikarya, Ascomycota, Pezizomycotina, Leotiomycetes, Leotiomycetidae, Helotiales, Sclerotiniacea Dumontinia tuberosa Anemonenbecherling Dumontinia tuberosa Dumontinia tuberosa (Bulliard) L.M. Kohn 1979 Octospora tuberosa Hedwig 1789 Peziza tuberosa (Hedwig) Dickson 1790 Peziza tuberosa Bulliard 1791 Macroscyphus tuberosus (Hedwig) Gray 1821 Sclerotinia tuberosa (Hedwig) Fuckel 1870 Hymenoscyphus tuberosus (Bulliard) W. Phillips 1887 Whetzelinia tuberosa (Hedwig) Korf & Dumont 1972 Dumontinia tuberosa (Bulliard) L.M. Kohn 1979 Der Anemonenbecherling, ein gestielter Becherling, ist ein Vertreter im Auenwald. Dieses Pilzchen ist ein Schmarotzer. Der Stiel entspringt einem Sklerotium, das sich in der Erde, in Verbindung mit Rhizomen von Anemonenarten entwickelt. makroskopisch Fruchtkörper / Habitus / Wachstumsform Meist in Gruppen. botanisch / ökologisch Standort Auenwälder, trockene, sandige und warme Standorte. Arten: Sclerotinia trifoliorum https://www.mycopedia.ch/pilze/9443.htm Gattung/en: Dumontinia https://www.mycopedia.ch/pilze/8939.htm Links Botanik Anemone ranunculoides https://www.mycopedia.ch/pilze/9555.htm Anemone nemorosa https://www.mycopedia.ch/pilze/9554.htm Verwandte Themen & weiterführende Links: Becherlinge https://www.mycopedia.ch/pilze/9454.htm DUMONTINIA_TUBEROSA www.mycopedia.ch - T. Flammer© 07.09.2021 Seite 1 Dumontinia tuberosa Pilzportrait Fungi, Dikarya, Ascomycota, Pezizomycotina, Leotiomycetes, Leotiomycetidae, Helotiales, Sclerotiniacea Dumontinia tuberosa Anemonenbecherling Flammer, T© 127 28.09.2009 Flammer, T© 129 28.09.2009 Anemone nemorosa Flammer, T© 128 21.04.2013 Flammer, T© 414 21.04.2013 DUMONTINIA_TUBEROSA www.mycopedia.ch - T. Flammer© 07.09.2021 Seite 2 Dumontinia tuberosa Pilzportrait Fungi, Dikarya, Ascomycota, Pezizomycotina, Leotiomycetes, Leotiomycetidae, Helotiales, Sclerotiniacea Dumontinia tuberosa Anemonenbecherling Flammer, T© 3581 21.04.2013 Flammer, T© 3582 21.04.2013 Asci Flammer, T© 3583 21.04.2013 Flammer, T© 3584 21.04.2013 DUMONTINIA_TUBEROSA www.mycopedia.ch - T. -
A Preliminary Checklist of Arizona Macrofungi
A PRELIMINARY CHECKLIST OF ARIZONA MACROFUNGI Scott T. Bates School of Life Sciences Arizona State University PO Box 874601 Tempe, AZ 85287-4601 ABSTRACT A checklist of 1290 species of nonlichenized ascomycetaceous, basidiomycetaceous, and zygomycetaceous macrofungi is presented for the state of Arizona. The checklist was compiled from records of Arizona fungi in scientific publications or herbarium databases. Additional records were obtained from a physical search of herbarium specimens in the University of Arizona’s Robert L. Gilbertson Mycological Herbarium and of the author’s personal herbarium. This publication represents the first comprehensive checklist of macrofungi for Arizona. In all probability, the checklist is far from complete as new species await discovery and some of the species listed are in need of taxonomic revision. The data presented here serve as a baseline for future studies related to fungal biodiversity in Arizona and can contribute to state or national inventories of biota. INTRODUCTION Arizona is a state noted for the diversity of its biotic communities (Brown 1994). Boreal forests found at high altitudes, the ‘Sky Islands’ prevalent in the southern parts of the state, and ponderosa pine (Pinus ponderosa P.& C. Lawson) forests that are widespread in Arizona, all provide rich habitats that sustain numerous species of macrofungi. Even xeric biomes, such as desertscrub and semidesert- grasslands, support a unique mycota, which include rare species such as Itajahya galericulata A. Møller (Long & Stouffer 1943b, Fig. 2c). Although checklists for some groups of fungi present in the state have been published previously (e.g., Gilbertson & Budington 1970, Gilbertson et al. 1974, Gilbertson & Bigelow 1998, Fogel & States 2002), this checklist represents the first comprehensive listing of all macrofungi in the kingdom Eumycota (Fungi) that are known from Arizona. -
MMA MASTERLIST - Sorted by Taxonomy
MMA MASTERLIST - Sorted by Taxonomy Sunday, December 10, 2017 Page 1 of 86 Amoebozoa Mycetomycota Protosteliomycetes Protosteliales Ceratiomyxaceae Ceratiomyxa fruticulosa Ceratiomyxa fruticulosa var. fruticulosa Ceratiomyxa fruticulosa var. poroides Ceratiomyxa sp. Mycetozoa Myxogastrea Incertae Sedis in Myxogastrea Liceaceae Licea minima Stemonitidaceae Brefeldia maxima Comatricha pulchella Comatricha sp. Comatricha typhoides Stemonitis axifera Stemonitis fusca Stemonitis sp. Stemonitis splendens Chromista Oomycota Incertae Sedis in Oomycota Peronosporales Peronosporaceae Plasmopara viticola Pythiaceae Pythium deBaryanum Oomycetes Saprolegniales Saprolegniaceae Saprolegnia sp. Peronosporea Albuginales Albuginaceae Albugo candida Fungus Ascomycota Ascomycetes Boliniales Boliniaceae Camarops petersii Capnodiales Capnodiaceae Scorias spongiosa Diaporthales Gnomoniaceae Cryptodiaporthe corni Sydowiellaceae Stegophora ulmea Valsaceae Cryphonectria parasitica Valsella nigroannulata Elaphomycetales Elaphomycetaceae Elaphomyces granulatus Elaphomyces sp. Erysiphales Erysiphaceae Erysiphe aggregata Erysiphe cichoracearum Erysiphe polygoni Microsphaera extensa Phyllactinia guttata Podosphaera clandestina Uncinula adunca Uncinula necator Hysteriales Hysteriaceae Glonium stellatum Leotiales Bulgariaceae Crinula caliciiformis Crinula sp. Mycocaliciales Mycocaliciaceae Phaeocalicium polyporaeum Peltigerales Collemataceae Leptogium cyanescens Lobariaceae Sticta fimbriata Nephromataceae Nephroma helveticum Peltigeraceae Peltigera evansiana Peltigera -
Pseudotsuga Menziesii)
120 - PART 1. CONSENSUS DOCUMENTS ON BIOLOGY OF TREES Section 4. Douglas-Fir (Pseudotsuga menziesii) 1. Taxonomy Pseudotsuga menziesii (Mirbel) Franco is generally called Douglas-fir (so spelled to maintain its distinction from true firs, the genus Abies). Pseudotsuga Carrière is in the kingdom Plantae, division Pinophyta (traditionally Coniferophyta), class Pinopsida, order Pinales (conifers), and family Pinaceae. The genus Pseudotsuga is most closely related to Larix (larches), as indicated in particular by cone morphology and nuclear, mitochondrial and chloroplast DNA phylogenies (Silen 1978; Wang et al. 2000); both genera also have non-saccate pollen (Owens et al. 1981, 1994). Based on a molecular clock analysis, Larix and Pseudotsuga are estimated to have diverged more than 65 million years ago in the Late Cretaceous to Paleocene (Wang et al. 2000). The earliest known fossil of Pseudotsuga dates from 32 Mya in the Early Oligocene (Schorn and Thompson 1998). Pseudostuga is generally considered to comprise two species native to North America, the widespread Pseudostuga menziesii and the southwestern California endemic P. macrocarpa (Vasey) Mayr (bigcone Douglas-fir), and in eastern Asia comprises three or fewer endemic species in China (Fu et al. 1999) and another in Japan. The taxonomy within the genus is not yet settled, and more species have been described (Farjon 1990). All reported taxa except P. menziesii have a karyotype of 2n = 24, the usual diploid number of chromosomes in Pinaceae, whereas the P. menziesii karyotype is unique with 2n = 26. The two North American species are vegetatively rather similar, but differ markedly in the size of their seeds and seed cones, the latter 4-10 cm long for P. -
Taxonomy and Systematics of Thelephorales – Glimpses Into Its Hidden Hyperdiversity
Taxonomy and Systematics of Thelephorales – Glimpses Into its Hidden Hyperdiversity Sten Svantesson 2020 UNIVERSITY OF GOTHENBURG Faculty of Science Department of Biological and Environmental Sciences Opponent Prof. Annemieke Verbeken Examiner Prof. Bengt Oxelman Supervisors Associate Prof. Ellen Larsson & Profs. Karl-Henrik Larsson, Urmas Kõljalg Associate Profs. Tom W. May, R. Henrik Nilsson © Sten Svantesson All rights reserved. No part of this publication may be reproduced or transmitted, in any form or by any means, without written permission. Svantesson S (2020) Taxonomy and systematics of Thelephorales – glimpses into its hidden hyperdiversity. PhD thesis. Department of Biological and Environmental Sciences, University of Gothenburg, Gothenburg, Sweden. Många är långa och svåra att fånga Cover image: Pseudotomentella alobata, a newly described species in the Pseudotomentella tristis group. Många syns inte men finns ändå Många är gula och fula och gröna ISBN print: 978-91-8009-064-3 Och sköna och röda eller blå ISBN digital: 978-91-8009-065-0 Många är stora som hus eller så NMÄ NENMÄRK ANE RKE VA ET SV T Digital version available at: http://hdl.handle.net/2077/66642 S Men de flesta är små, mycket små, mycket små Trycksak Trycksak 3041 0234 – Olle Adolphson, från visan Okända djur Printed by Stema Specialtryck AB 3041 0234 © Sten Svantesson All rights reserved. No part of this publication may be reproduced or transmitted, in any form or by any means, without written permission. Svantesson S (2020) Taxonomy and systematics of Thelephorales – glimpses into its hidden hyperdiversity. PhD thesis. Department of Biological and Environmental Sciences, University of Gothenburg, Gothenburg, Sweden. Många är långa och svåra att fånga Cover image: Pseudotomentella alobata, a newly described species in the Pseudotomentella tristis group.