Parkin Regulates Kainate Receptors by Interacting with the Gluk2 Subunit
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Expression of the P53 Inhibitors MDM2 and MDM4 As Outcome
ANTICANCER RESEARCH 36 : 5205-5214 (2016) doi:10.21873/anticanres.11091 Expression of the p53 Inhibitors MDM2 and MDM4 as Outcome Predictor in Muscle-invasive Bladder Cancer MAXIMILIAN CHRISTIAN KRIEGMAIR 1* , MA TT HIAS BALK 1, RALPH WIRTZ 2* , ANNETTE STEIDLER 1, CLEO-ARON WEIS 3, JOHANNES BREYER 4* , ARNDT HARTMANN 5* , CHRISTIAN BOLENZ 6* and PHILIPP ERBEN 1* 1Department of Urology, University Medical Centre Mannheim, Mannheim, Germany; 2Stratifyer Molecular Pathology, Köln, Germany; 3Institute of Pathology, University Medical Centre Mannheim, Mannheim, Germany; 4Department of Urology, University of Regensburg, Regensburg, Germany; 5Institute of Pathology, University Erlangen-Nuernberg, Erlangen, Germany; 6Department of Urology, University of Ulm, Ulm, Germany Abstract. Aim: To evaluate the prognostic role of the p53- Urothelical cell carcinoma (UCC) of the bladder is the second upstream inhibitors MDM2, MDM4 and its splice variant most common urogenital neoplasm worldwide (1). Whereas MDM4-S in patients undergoing radical cystectomy (RC) for non-muscle invasive UCC can be well treated and controlled muscle-invasive bladder cancer (MIBC). Materials and by endoscopic resection, for MIBC, which represents 30% of Methods: mRNA Expression levels of MDM2, MDM4 and tumor incidence, radical cystectomy (RC) remains the only MDM4-S were assessed by quantitative real-time polymerase curative option. However, MIBC progresses frequently to a chain reaction (qRT-PCR) in 75 RC samples. Logistic life-threatening metastatic disease with limited therapeutic regression analyses identified predictors of recurrence-free options (2). Standard clinical prognosis parameters in bladder (RFS) and cancer-specific survival (CSS). Results: High cancer such as stage, grade or patient’s age, have limitations expression was found in 42% (MDM2), 27% (MDMD4) and in assessing individual patient’s prognosis and response to 91% (MDM4-S) of tumor specimens. -
Gp78 E3 Ubiquitin Ligase Mediates Both Basal and Damage-Induced Mitophagy
bioRxiv preprint doi: https://doi.org/10.1101/407593; this version posted September 3, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Gp78 E3 ubiquitin ligase mediates both basal and damage-induced mitophagy Bharat Joshi, Yahya Mohammadzadeh, Guang Gao and Ivan R. Nabi Department of Cellular and Physiological Sciences, Life Sciences Institute, University of British Columbia, Vancouver, BC V6T 1Z3, Canada #Running title: Gp78 control of mitophagy §To whom correspondence should be addressed: Ivan R. Nabi, Department of Cellular and Physiological Sciences, Life Sciences Institute, University of British Columbia, 2350 Health Sciences Mall, Vancouver, BC V6T 1Z3 Canada. Tel: +1-(604) 822-7000 E-mail: [email protected] Key words: Gp78 ubiquitin ligase; mitochondria; autophagy; PINK1; Parkin bioRxiv preprint doi: https://doi.org/10.1101/407593; this version posted September 3, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Abstract Mitophagy, the elimination of mitochondria by the autophagy machinery, evolved to monitor mitochondrial health and maintain mitochondrial integrity. PINK1 is a sensor of mitochondrial health that recruits Parkin and other mitophagy-inducing ubiquitin ligases to depolarized mitochondria. However, mechanisms underlying mitophagic control of mitochondrial homeostasis, basal mitophagy, remain poorly understood. The Gp78 E3 ubiquitin ligase, an endoplasmic reticulum membrane protein, induces mitochondrial fission, endoplasmic reticulum- mitochondria contacts and mitophagy of depolarized mitochondria. CRISPR/Cas9 knockout of Gp78 in HT-1080 fibrosarcoma cells results in reduced ER-mitochondria contacts, increased mitochondrial volume and resistance to CCCP-induced mitophagy. -
PICK1-Deficient Mice Exhibit Impaired Response to Cocaine and Dysregulated Dopamine Homeostasis
PICK1-Deficient Mice Exhibit Impaired Response to Cocaine and Dysregulated Dopamine Homeostasis Jensen, Kathrine Louise; Sørensen, Gunnar; Dencker, Ditte; Owens, William Anthony; Rahbek-Clemmensen, Troels; Brett Lever, Michael; Runegaard, Annika H; Riis Christensen, Nikolaj; Weikop, Pia; Wörtwein, Gitta; Fink-Jensen, Anders; Madsen, Kenneth L; Daws, Lynette; Gether, Ulrik; Rickhag, Mattias Published in: eNeuro DOI: 10.1523/ENEURO.0422-17.2018 Publication date: 2018 Document version Publisher's PDF, also known as Version of record Document license: CC BY Citation for published version (APA): Jensen, K. L., Sørensen, G., Dencker, D., Owens, W. A., Rahbek-Clemmensen, T., Brett Lever, M., Runegaard, A. H., Riis Christensen, N., Weikop, P., Wörtwein, G., Fink-Jensen, A., Madsen, K. L., Daws, L., Gether, U., & Rickhag, M. (2018). PICK1-Deficient Mice Exhibit Impaired Response to Cocaine and Dysregulated Dopamine Homeostasis. eNeuro, 5(3). https://doi.org/10.1523/ENEURO.0422-17.2018 Download date: 25. sep.. 2021 New Research Disorders of the Nervous System PICK1-Deficient Mice Exhibit Impaired Response to Cocaine and Dysregulated Dopamine Homeostasis ء ء Kathrine Louise Jensen,1, Gunnar Sørensen,1,2, Ditte Dencker,2 William Anthony Owens,3 Troels Rahbek-Clemmensen,1 Michael Brett Lever,1 Annika H. Runegaard,1 Nikolaj Riis Christensen,1 Pia Weikop,2 Gitta Wörtwein,2 Anders Fink-Jensen,2 Kenneth L. Madsen,1 Lynette Daws,3 Ulrik Gether,1 and Mattias Rickhag1 DOI:http://dx.doi.org/10.1523/ENEURO.0422-17.2018 1Molecular Neuropharmacology and Genetics -
AMPA Receptor Dysregulation and Therapeutic Interventions in a Mouse Model of CDKL5 Deficiency Disorder
4814 • The Journal of Neuroscience, June 12, 2019 • 39(24):4814–4828 Neurobiology of Disease AMPA Receptor Dysregulation and Therapeutic Interventions in a Mouse Model of CDKL5 Deficiency Disorder Madhumita Yennawar,1 XRachel S. White,2 and XFrances E. Jensen2 1Department of Systems Pharmacology and Translational Therapeutics, and 2Department of Neurology, University of Pennsylvania Perelman School of Medicine, Philadelphia, Pennsylvania 19104 Pathogenic mutations in cyclin-dependent kinase-like 5 (CDKL5) result in CDKL5 deficiency disorder (CDD), a rare disease marked by early-life seizures, autistic behaviors, and intellectual disability. Although mouse models of CDD exhibit dendritic instability and alter- ations in synaptic scaffolding proteins, studies of glutamate receptor levels and function are limited. Here we used a novel mouse model of CDD, the Cdkl5R59X knock-in mouse (R59X), to investigate changes in synaptic glutamate receptor subunits and functional conse- quences. Male mice were used for all experiments to avoid the confounding effects of X-inactivation that would be present in female heterozygous mice. We showed that adult male R59X mice recapitulated the behavioral outcomes observed in other mouse models of CDD, including social deficits and memory and learning impairments, and exhibited decreased latency to seizure upon pentylenetetrazol administration. Furthermore, we observed a specific increase in GluA2-lacking ␣-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid)-type glutamate receptors (AMPARs) in the adult R59X hippocampus, which is accompanied electrophysiologically by increased rectification ratio of AMPAR EPSCs and elevated early-phase long term potentiation (LTP). Finally, we showed that acute treatment with the GluA2-lacking AMPAR blocker IEM-1460 decreased AMPAR currents, and rescued social deficits, working memory impairments, and seizure behavior latency in R59X mice. -
Generation of Isogenic Human Pluripotent Stem Cell-Derived
University of Connecticut OpenCommons@UConn Doctoral Dissertations University of Connecticut Graduate School 11-9-2018 Generation of Isogenic Human Pluripotent Stem Cell-Derived Neurons to Establish a Molecular Angelman Syndrome Phenotype and to Study the UBE3A Protein Isoforms Carissa Sirois University of Connecticut - Storrs, [email protected] Follow this and additional works at: https://opencommons.uconn.edu/dissertations Recommended Citation Sirois, Carissa, "Generation of Isogenic Human Pluripotent Stem Cell-Derived Neurons to Establish a Molecular Angelman Syndrome Phenotype and to Study the UBE3A Protein Isoforms" (2018). Doctoral Dissertations. 1988. https://opencommons.uconn.edu/dissertations/1988 Generation of Isogenic Human Pluripotent Stem Cell-Derived Neurons to Establish a Molecular Angelman Syndrome Phenotype and to Study the UBE3A Protein Isoforms Carissa L. Sirois, Ph.D. University of Connecticut, 2018 Abstract Angelman Syndrome (AS) is a neurodevelopment disorder for which there is currently no cure that is characterized by severe seizures, intellectual disability, absent speech, ataxia, and happy affect. Loss of expression from the maternally inherited copy of UBE3A, a gene regulated by genomic imprinting, causes AS. Currently there are multiple promising therapeutic approaches being explored and developed for AS, some of which involve targeting or expression of the human genetic sequence. Subsequently, it is necessary to establish robust cellular models for AS that can be used to test these, as well as future, potential AS therapies. Toward this aim, here we have used the CRISPR/Cas9 genome editing system to generate several isogenic human pluripotent stem cell lines two achieve two primary goals. First, we aimed to establish a robust quantitative molecular phenotype for cultured human AS neurons using the transcriptome. -
PICK1 Is Implicated in Organelle Motility in an Arp2/3 Complex–Independent Manner
M BoC | ARTICLE PICK1 is implicated in organelle motility in an Arp2/3 complex–independent manner Yadaiah Madasua, Changsong Yangb, Malgorzata Boczkowskaa, Kelley A. Bethoneya, Adam Zwolaka, Grzegorz Rebowskia, Tatyana Svitkinab, and Roberto Domingueza aDepartment of Physiology, Perelman School of Medicine, and bDepartment of Biology, University of Pennsylvania, Philadelphia, PA 19104 ABSTRACT PICK1 is a modular scaffold implicated in synaptic receptor trafficking. It features Monitoring Editor a PDZ domain, a BAR domain, and an acidic C-terminal tail (ACT). Analysis by small- angle x- Thomas D. Pollard ray scattering suggests a structural model that places the receptor-binding site of the PDZ Yale University domain and membrane-binding surfaces of the BAR and PDZ domains adjacent to each other Received: Oct 14, 2014 on the concave side of the banana-shaped PICK1 dimer. In the model, the ACT of one subunit Revised: Dec 23, 2014 of the dimer interacts with the PDZ and BAR domains of the other subunit, possibly account- Accepted: Jan 26, 2015 ing for autoinhibition. Consistently, full-length PICK1 shows diffuse cytoplasmic localization, but it clusters on vesicle-like structures that colocalize with the trans-Golgi network marker TGN38 upon deletion of either the ACT or PDZ domain. This localization is driven by the BAR domain. Live-cell imaging further reveals that PICK1-associated vesicles undergo fast, nondi- rectional motility in an F-actin–dependent manner, but deleting the ACT dramatically reduces vesicle speed. Thus the ACT links PICK1-associated vesicles to a motility factor, likely myosin, but, contrary to previous reports, PICK1 neither binds nor inhibits Arp2/3 complex. -
Human Induced Pluripotent Stem Cell–Derived Podocytes Mature Into Vascularized Glomeruli Upon Experimental Transplantation
BASIC RESEARCH www.jasn.org Human Induced Pluripotent Stem Cell–Derived Podocytes Mature into Vascularized Glomeruli upon Experimental Transplantation † Sazia Sharmin,* Atsuhiro Taguchi,* Yusuke Kaku,* Yasuhiro Yoshimura,* Tomoko Ohmori,* ‡ † ‡ Tetsushi Sakuma, Masashi Mukoyama, Takashi Yamamoto, Hidetake Kurihara,§ and | Ryuichi Nishinakamura* *Department of Kidney Development, Institute of Molecular Embryology and Genetics, and †Department of Nephrology, Faculty of Life Sciences, Kumamoto University, Kumamoto, Japan; ‡Department of Mathematical and Life Sciences, Graduate School of Science, Hiroshima University, Hiroshima, Japan; §Division of Anatomy, Juntendo University School of Medicine, Tokyo, Japan; and |Japan Science and Technology Agency, CREST, Kumamoto, Japan ABSTRACT Glomerular podocytes express proteins, such as nephrin, that constitute the slit diaphragm, thereby contributing to the filtration process in the kidney. Glomerular development has been analyzed mainly in mice, whereas analysis of human kidney development has been minimal because of limited access to embryonic kidneys. We previously reported the induction of three-dimensional primordial glomeruli from human induced pluripotent stem (iPS) cells. Here, using transcription activator–like effector nuclease-mediated homologous recombination, we generated human iPS cell lines that express green fluorescent protein (GFP) in the NPHS1 locus, which encodes nephrin, and we show that GFP expression facilitated accurate visualization of nephrin-positive podocyte formation in -
Role of Ubiquitin and the HPV E6 Oncoprotein in E6AP- Mediated Ubiquitination
Role of ubiquitin and the HPV E6 oncoprotein in E6AP- mediated ubiquitination Franziska Mortensena,b, Daniel Schneidera,c, Tanja Barbica, Anna Sladewska-Marquardta, Simone Kühnlea,1, Andreas Marxb,c, and Martin Scheffnera,b,2 aDepartment of Biology, University of Konstanz, 78457 Konstanz, Germany; bKonstanz Research School Chemical Biology, University of Konstanz, 78457 Konstanz, Germany; and cDepartment of Chemistry, University of Konstanz, 78457 Konstanz, Germany Edited by Aaron Ciechanover, Technion-Israel Institute of Technology, Bat Galim, Haifa, Israel, and approved July 7, 2015 (received for review March 25, 2015) Deregulation of the ubiquitin ligase E6 associated protein (E6AP) autism spectrum disorders (15, 16) and (ii) in mice, results in encoded by the UBE3A gene has been associated with three dif- increased E6AP levels and autistic phenotypes (17). ferent clinical pictures. Hijacking of E6AP by the E6 oncoprotein of The notion that alteration of the substrate spectrum, loss of distinct human papillomaviruses (HPV) contributes to the develop- E3 function, and increased E3 function of E6AP contribute to ment of cervical cancer, whereas loss of E6AP expression or func- the development of distinct disorders indicates that expression tion is the cause of Angelman syndrome, a neurodevelopmental and/or E3 activity of E6AP have to be tightly controlled. Whereas disorder, and increased expression of E6AP has been involved in some mechanisms controlling transcription of the UBE3A gene autism spectrum disorders. Although these observations indicate have been identified (e.g., the paternal allele is silenced by a that the activity of E6AP has to be tightly controlled, only little is UBE3A antisense transcript) (14, 18), only little is known about known about how E6AP is regulated at the posttranslational level. -
The Glutamate Receptor Ion Channels
0031-6997/99/5101-0007$03.00/0 PHARMACOLOGICAL REVIEWS Vol. 51, No. 1 Copyright © 1999 by The American Society for Pharmacology and Experimental Therapeutics Printed in U.S.A. The Glutamate Receptor Ion Channels RAYMOND DINGLEDINE,1 KARIN BORGES, DEREK BOWIE, AND STEPHEN F. TRAYNELIS Department of Pharmacology, Emory University School of Medicine, Atlanta, Georgia This paper is available online at http://www.pharmrev.org I. Introduction ............................................................................. 8 II. Gene families ............................................................................ 9 III. Receptor structure ...................................................................... 10 A. Transmembrane topology ............................................................. 10 B. Subunit stoichiometry ................................................................ 10 C. Ligand-binding sites located in a hinged clamshell-like gorge............................. 13 IV. RNA modifications that promote molecular diversity ....................................... 15 A. Alternative splicing .................................................................. 15 B. Editing of AMPA and kainate receptors ................................................ 17 V. Post-translational modifications .......................................................... 18 A. Phosphorylation of AMPA and kainate receptors ........................................ 18 B. Serine/threonine phosphorylation of NMDA receptors .................................. -
Role of Zinc in Parkin RING2 E3 Ubiquitin Ligase Ubiquitination By
Role of Zinc in Parkin RING2 E3 Ubiquitin Ligase Ubiquitination By Copyright 2016 KyeongMin Bae Submitted to the graduate degree program in Molecular Biosciences and the Graduate Faculty of the University of Kansas in partial fulfillment of the requirements for the degree of Master of Arts. Committee members: ________________________________ Chairperson: Mark Richter ________________________________ Roberto N. De Guzman ________________________________ Wonpil Im Date Defended: 27 April, 2016 ii The Thesis Committee for KyeongMin Bae certifies that this is the approved version of the following thesis: Role of Zinc in Parkin RING2 E3 Ubiquitin Ligase Ubiquitination ________________________________ Chairperson: Mark Richter Date approved: 28 April, 2016 iii Abstract In common neurodegenerative diseases among older adults, Parkinson’s disease (PD) ranks the second after Alzheimer’s disease. Symptoms of Parkinson’s disease are shaking, slowness of movement, rigidity of the extremities and neck, minimal facial expressions, short-walking steps, stopped posture, and arm swinging. Autosomal-Recessive Juvenile Parkinsonism (AR-JP) is the most frequent cause of familial PD, and results from mutations in the Parkin gene. The parkin protein acts as an E3 ubiquitin ligase and plays an important role in the ubiquitin proteasome system (UPS). Parkin’s role is to identify and tag proteins that are damaged or no longer needed. Mutations in Parkin represent ~50% of disease- causing defects in AR-JP. It is believed that the E3 ubiquitin ligase activity of the parkin protein may play a protective role in neurodegenerative disorders including Parkinson’s, Huntington’s, and Alzheimer’s diseases. Parkin belongs to a class of multiple RING (Really Interesting New Gene) domain proteins designated as RBR (RING, in between RING, RING) proteins. -
Mdm2 Enhances Ligase Activity of Parkin and Facilitates Mitophagy Seunghyi Kook1,2, Xuanzhi Zhan1,3, Kimberly Thibeault1, Mohamed R
www.nature.com/scientificreports OPEN Mdm2 enhances ligase activity of parkin and facilitates mitophagy Seunghyi Kook1,2, Xuanzhi Zhan1,3, Kimberly Thibeault1, Mohamed R. Ahmed1,4, Vsevolod V. Gurevich 1 & Eugenia V. Gurevich1* Loss-of-function mutations in the E3 ubiquitin ligase parkin have been implicated in the death of dopaminergic neurons in the substantia nigra, which is the root cause of dopamine defcit in the striatum in Parkinson's disease. Parkin ubiquitinates proteins on mitochondria that lost membrane potential, promoting the elimination of damaged mitochondria. Neuroprotective activity of parkin has been linked to its critical role in the mitochondria maintenance. Here we report a novel regulatory mechanism: another E3 ubiquitin ligase Mdm2 directly binds parkin and enhances its enzymatic activity in vitro and in intact cells. Mdm2 translocates to damaged mitochondria independently of parkin, enhances parkin-dependent ubiquitination of the outer mitochondria membrane protein mitofusin1. Mdm2 facilitates and its knockdown reduces parkin-dependent mitophagy. Thus, ubiquitously expressed Mdm2 might enhance cytoprotective parkin activity. The data suggest that parkin activation by Mdm2 could be targeted to increase its neuroprotective functions, which has implications for anti- parkinsonian therapy. Parkin was frst identifed through its association with autosomal recessive juvenile parkinsonism, a familial form of Parkinson's disease (PD) with early onset1. Loss-of-function mutations in parkin gene, including exon deletions and rearrangements, as well as nonsense and missense mutations, are commonly associated not only with familial, but also with apparently sporadic early onset PD2–5. Functionally, parkin is an E3 ubiquitin ligase6. Initially, the studies of parkin function in PD concentrated on the search for parkin substrates and the role of parkin loss in the dysfunction of the ubiquitin-proteasome system (UBS), which appears to play a prominent role in the PD-related neurodegeneration7. -
Alternative Splicing of AMPA Subunits in Prefrontal Cortical Fields Of
View metadata, citation and similar papers at core.ac.uk brought to you by CORE ORIGINAL RESEARCH ARTICLE published: 03 Januaryprovided 2012 by Frontiers - Publisher Connector PSYCHIATRY doi: 10.3389/fpsyt.2011.00072 Alternative splicing of AMPA subunits in prefrontal cortical fields of cynomolgus monkeys following chronic ethanol self-administration Glen Acosta1, David P.Freidman1, Kathleen A. Grant 2 and Scott E. Hemby 1,3* 1 Department of Physiology and Pharmacology, Wake Forest University, Winston-Salem, NC, USA 2 Oregon National Primate Research Center, Oregon Health and Sciences University, Beaverton, OR, USA 3 Department of Psychiatry and Behavioral Sciences, Wake Forest University, Winston-Salem, NC, USA Edited by: Functional impairment of the orbital and medial prefrontal cortex underlies deficits in exec- Lara Ray, University of California, USA utive control that characterize addictive disorders, including alcohol addiction. Previous Reviewed by: studies indicate that alcohol alters glutamate neurotransmission and one substrate of these Raj Sevak, University of California, USA effects may be through the reconfiguration of the subunits constituting ionotropic gluta- Shaolin Wang, University of Virginia, mate receptor (iGluR) complexes. Glutamatergic transmission is integral to cortico-cortical USA and cortico-subcortical communication and alcohol-induced changes in the abundance of *Correspondence: the receptor subunits and/or their splice variants may result in critical functional impair- Scott E. Hemby, Medical Center ments of prefrontal cortex in alcohol dependence. To this end, the effects of chronic Boulevard, Wake Forest University School of Medicine, Winston-Salem, ethanol self-administration on glutamate receptor ionotropic AMPA (GRIA) subunit vari- NC 27157, USA. ant and kainate (GRIK) subunit mRNA expression were studied in the orbitofrontal cortex e-mail: [email protected] (OFC), dorsolateral prefrontal cortex (DLPFC), and anterior cingulate cortex (ACC) of male cynomolgus monkeys.