Naturally Occurring Polymorphisms of the Mouse Gammaretrovirus Receptors CAT-1 and XPR1 Alter Virus Tropism and Pathogenicity
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Non-Primate Lentiviral Vectors and Their Applications in Gene Therapy for Ocular Disorders
viruses Review Non-Primate Lentiviral Vectors and Their Applications in Gene Therapy for Ocular Disorders Vincenzo Cavalieri 1,2,* ID , Elena Baiamonte 3 and Melania Lo Iacono 3 1 Department of Biological, Chemical and Pharmaceutical Sciences and Technologies (STEBICEF), University of Palermo, Viale delle Scienze Edificio 16, 90128 Palermo, Italy 2 Advanced Technologies Network (ATeN) Center, University of Palermo, Viale delle Scienze Edificio 18, 90128 Palermo, Italy 3 Campus of Haematology Franco e Piera Cutino, Villa Sofia-Cervello Hospital, 90146 Palermo, Italy; [email protected] (E.B.); [email protected] (M.L.I.) * Correspondence: [email protected] Received: 30 April 2018; Accepted: 7 June 2018; Published: 9 June 2018 Abstract: Lentiviruses have a number of molecular features in common, starting with the ability to integrate their genetic material into the genome of non-dividing infected cells. A peculiar property of non-primate lentiviruses consists in their incapability to infect and induce diseases in humans, thus providing the main rationale for deriving biologically safe lentiviral vectors for gene therapy applications. In this review, we first give an overview of non-primate lentiviruses, highlighting their common and distinctive molecular characteristics together with key concepts in the molecular biology of lentiviruses. We next examine the bioengineering strategies leading to the conversion of lentiviruses into recombinant lentiviral vectors, discussing their potential clinical applications in ophthalmological research. Finally, we highlight the invaluable role of animal organisms, including the emerging zebrafish model, in ocular gene therapy based on non-primate lentiviral vectors and in ophthalmology research and vision science in general. Keywords: FIV; EIAV; BIV; JDV; VMV; CAEV; lentiviral vector; gene therapy; ophthalmology; zebrafish 1. -
Guide for Common Viral Diseases of Animals in Louisiana
Sampling and Testing Guide for Common Viral Diseases of Animals in Louisiana Please click on the species of interest: Cattle Deer and Small Ruminants The Louisiana Animal Swine Disease Diagnostic Horses Laboratory Dogs A service unit of the LSU School of Veterinary Medicine Adapted from Murphy, F.A., et al, Veterinary Virology, 3rd ed. Cats Academic Press, 1999. Compiled by Rob Poston Multi-species: Rabiesvirus DCN LADDL Guide for Common Viral Diseases v. B2 1 Cattle Please click on the principle system involvement Generalized viral diseases Respiratory viral diseases Enteric viral diseases Reproductive/neonatal viral diseases Viral infections affecting the skin Back to the Beginning DCN LADDL Guide for Common Viral Diseases v. B2 2 Deer and Small Ruminants Please click on the principle system involvement Generalized viral disease Respiratory viral disease Enteric viral diseases Reproductive/neonatal viral diseases Viral infections affecting the skin Back to the Beginning DCN LADDL Guide for Common Viral Diseases v. B2 3 Swine Please click on the principle system involvement Generalized viral diseases Respiratory viral diseases Enteric viral diseases Reproductive/neonatal viral diseases Viral infections affecting the skin Back to the Beginning DCN LADDL Guide for Common Viral Diseases v. B2 4 Horses Please click on the principle system involvement Generalized viral diseases Neurological viral diseases Respiratory viral diseases Enteric viral diseases Abortifacient/neonatal viral diseases Viral infections affecting the skin Back to the Beginning DCN LADDL Guide for Common Viral Diseases v. B2 5 Dogs Please click on the principle system involvement Generalized viral diseases Respiratory viral diseases Enteric viral diseases Reproductive/neonatal viral diseases Back to the Beginning DCN LADDL Guide for Common Viral Diseases v. -
Enhancement of Antitumor Activity of Gammaretrovirus Carrying IL-12
Cancer Gene Therapy (2010) 17, 37–48 r 2010 Nature Publishing Group All rights reserved 0929-1903/10 $32.00 www.nature.com/cgt ORIGINAL ARTICLE Enhancement of antitumor activity of gammaretrovirus carrying IL-12 gene through genetic modification of envelope targeting HER2 receptor: a promising strategy for bladder cancer therapy Y-S Tsai1,2,3, A-L Shiau1,4, Y-F Chen4, H-T Tsai3, T-S Tzai3 and C-L Wu1,5 1Institute of Clinical Medicine, National Cheng Kung University Medical College, Tainan, Taiwan; 2Department of Urology, National Cheng Kung University Hospital, Dou-Liou Branch, Yunlin, Taiwan; 3Department of Urology, National Cheng Kung University Medical College, Tainan, Taiwan; 4Department of Microbiology and Immunology, National Cheng Kung University Medical College, Tainan, Taiwan and 5Department of Biochemistry and Molecular Biology, National Cheng Kung University Medical College, Tainan, Taiwan The objective of this study was to develop an HER2-targeted, envelope-modified Moloney murine leukemia virus (MoMLV)-based gammaretroviral vector carrying interleukin (IL)-12 gene for bladder cancer therapy. It displayed a chimeric envelope protein containing a single-chain variable fragment (scFv) antibody to the HER2 receptor and carried the mouse IL-12 gene. The fragment of anti-erbB2scFv was constructed into the proline-rich region of the viral envelope of the packaging vector lacking a transmembrane subunit of the carboxyl terminal region of surface subunit. As compared with envelope-unmodified gammaretroviruses, envelope- modified ones -
Toll-Like Receptor and Cytokine Responses to Infection with Endogenous and Exogenous Koala Retrovirus, and Vaccination As a Control Strategy
Review Toll-Like Receptor and Cytokine Responses to Infection with Endogenous and Exogenous Koala Retrovirus, and Vaccination as a Control Strategy Mohammad Enamul Hoque Kayesh 1,2 , Md Abul Hashem 1,3,4 and Kyoko Tsukiyama-Kohara 1,4,* 1 Transboundary Animal Diseases Centre, Joint Faculty of Veterinary Medicine, Kagoshima University, Kagoshima 890-0065, Japan; [email protected] (M.E.H.K.); [email protected] (M.A.H.) 2 Department of Microbiology and Public Health, Faculty of Animal Science and Veterinary Medicine, Patuakhali Science and Technology University, Barishal 8210, Bangladesh 3 Department of Health, Chattogram City Corporation, Chattogram 4000, Bangladesh 4 Laboratory of Animal Hygiene, Joint Faculty of Veterinary Medicine, Kagoshima University, Kagoshima 890-0065, Japan * Correspondence: [email protected]; Tel.: +81-99-285-3589 Abstract: Koala populations are currently declining and under threat from koala retrovirus (KoRV) infection both in the wild and in captivity. KoRV is assumed to cause immunosuppression and neoplastic diseases, favoring chlamydiosis in koalas. Currently, 10 KoRV subtypes have been identified, including an endogenous subtype (KoRV-A) and nine exogenous subtypes (KoRV-B to KoRV-J). The host’s immune response acts as a safeguard against pathogens. Therefore, a proper understanding of the immune response mechanisms against infection is of great importance for Citation: Kayesh, M.E.H.; Hashem, the host’s survival, as well as for the development of therapeutic and prophylactic interventions. M.A.; Tsukiyama-Kohara, K. Toll-Like A vaccine is an important protective as well as being a therapeutic tool against infectious disease, Receptor and Cytokine Responses to Infection with Endogenous and and several studies have shown promise for the development of an effective vaccine against KoRV. -
Koala Retrovirus in Free-Ranging Populations—Prevalence
The Koala and its Retroviruses: Implications for Sustainability and Survival edited by Geoffrey W. Pye, Rebecca N. Johnson, and Alex D. Greenwood Preface .................................................................... Pye, Johnson, & Greenwood 1 A novel exogenous retrovirus ...................................................................... Eiden 3 KoRV and other endogenous retroviruses ............................. Roca & Greenwood 5 Molecular biology and evolution of KoRV ............................. Greenwood & Roca 11 Prevalence of KoRV ............................. Meers, Simmons, Jones, Clarke, & Young 15 Disease in wild koalas ............................................................... Hanger & Loader 19 Origins and impact of KoRV ........................................ Simmons, Meers, Clarke, Young, Jones, Hanger, Loader, & McKee 31 Koala immunology .......................................................... Higgins, Lau, & Maher 35 Disease in captive Australian koalas ........................................................... Gillett 39 Molecular characterization of KoRV ..................................................... Miyazawa 47 European zoo-based koalas ........................................................................ Mulot 51 KoRV in North American zoos ......................................... Pye, Zheng, & Switzer 55 Disease at the genomic level ........................................................................... Neil 57 Koala retrovirus variants ........................................................................... -
Discovery of Prosimian and Afrotherian Foamy Viruses And
Katzourakis et al. Retrovirology 2014, 11:61 http://www.retrovirology.com/content/11/1/61 RESEARCH Open Access Discovery of prosimian and afrotherian foamy viruses and potential cross species transmissions amidst stable and ancient mammalian co-evolution Aris Katzourakis1*†, Pakorn Aiewsakun1†, Hongwei Jia2, Nathan D Wolfe3,4,5, Matthew LeBreton6, Anne D Yoder7 and William M Switzer2* Abstract Background: Foamy viruses (FVs) are a unique subfamily of retroviruses that are widely distributed in mammals. Owing to the availability of sequences from diverse mammals coupled with their pattern of codivergence with their hosts, FVs have one of the best-understood viral evolutionary histories ever documented, estimated to have an ancient origin. Nonetheless, our knowledge of some parts of FV evolution, notably that of prosimian and afrotherian FVs, is far from complete due to the lack of sequence data. Results: Here, we report the complete genome of the first extant prosimian FV (PSFV) isolated from a lorisiforme galago (PSFVgal), and a novel partial endogenous viral element with high sequence similarity to FVs, present in the afrotherian Cape golden mole genome (ChrEFV). We also further characterize a previously discovered endogenous PSFV present in the aye-aye genome (PSFVaye). Using phylogenetic methods and available FV sequence data, we show a deep divergence and stable co-evolution of FVs in eutherian mammals over 100 million years. Nonetheless, we found that the evolutionary histories of bat, aye-aye, and New World monkey FVs conflict with the evolutionary histories of their hosts. By combining sequence analysis and biogeographical knowledge, we propose explanations for these mismatches in FV-host evolutionary history. -
An Introduction to Viral Vectors: Safety Considerations
An Introduction to Viral Vectors: Safety Considerations Dawn P. Wooley, Ph.D., SM(NRCM), RBP, CBSP Learning Objectives Recognize hazards associated with viral vectors in research and animal testing laboratories. Interpret viral vector modifications pertinent to risk assessment. Understand the difference between gene delivery vectors and viral research vectors. 2 Outline Introduction to Viral Vectors Retroviral & Lentiviral Vectors (+RNA virus) Adeno and Adeno-Assoc. Vectors (DNA virus) Novel (-)RNA virus vectors NIH Guidelines and Other Resources Conclusions 3 Increased Use of Viral Vectors in Research Difficulties in DNA delivery to mammalian cells <50% with traditional transfection methods Up to ~90% with viral vectors Increased knowledge about viral systems Commercialization has made viral vectors more accessible Many new genes identified and cloned (transgenes) Gene therapy 4 5 6 What is a Viral Vector? Viral Vector: A viral genome with deletions in some or all essential genes and possibly insertion of a transgene Plasmid: Small (~2-20 kbp) circular DNA molecules that replicates in bacterial cells independently of the host cell chromosome 7 Molecular Biology Essentials Flow of genetic information Nucleic acid polarity Infectivity of viral genomes Understanding cDNA cis- vs. trans-acting sequences cis (Latin) – on the same side trans (Latin) – across, over, through 8 Genetic flow & nucleic acid polarity Coding DNA Strand (+) 5' 3' 5' 3' 5' 3' 3' 5' Noncoding DNA Strand (-) mRNA (+) RT 3' 5' cDNA(-) Proteins (Copy DNA aka complementary DNA) 3' 5' 3' 5' 5' 3' mRNA (+) ds DNA in plasmid 9 Virology Essentials Replication-defective vs. infectious virus Helper virus vs. helper plasmids Pathogenesis Original disease Disease caused by transgene Mechanisms of cancer Insertional mutagenesis Transduction 10 Viral Vector Design and Production 1 + Vector Helper Cell 2 + Helper Constructs Vector 3 + + Vector Helper Constructs Note: These viruses are replication-defective but still infectious. -
Genetic Modification of T Cells
biomedicines Review Genetic Modification of T Cells Richard A. Morgan * and Benjamin Boyerinas Bluebird bio, 150 Second Street, Cambridge, MA 02141, USA; [email protected] * Correspondence: [email protected]; Tel.: +1-339-499-9359; Fax: +1-339-499-9932 Academic Editor: Vincenzo Cerullo Received: 27 February 2016; Accepted: 13 April 2016; Published: 20 April 2016 Abstract: Gene transfer technology and its application to human gene therapy greatly expanded in the last decade. One area of investigation that appears particularly promising is the transfer of new genetic material into T cells for the potential treatment of cancer. Herein, we describe several core technologies that now yield high-efficiency gene transfer into primary human T cells. These gene transfer techniques include viral-based gene transfer methods based on modified Retroviridae and non-viral methods such as DNA-based transposons and direct transfer of mRNA by electroporation. Where specific examples are cited, we emphasize the transfer of chimeric antigen receptors (CARs) to T cells, which permits engineered T cells to recognize potential tumor antigens. Keywords: CAR (chimeric antigen receptor) T cells; immunotherapy; retroviral vector; lentiviral vector; CD19 CAR 1. Introduction The field of cancer immunotherapy is in the midst of a renaissance, with both passive and active immunotherapies yielding promising results in clinical trials. Treatment with chimeric antigen receptor-expressing T cells (CARTs) is one such therapeutic intervention that has the potential to permanently alter the face of cancer treatment. While we are just now beginning to understand the complexities involved with implementation of autologous cell transfer therapies such as CART, this type of therapy is dependent on efficient, stable, and safe gene transfer platforms. -
Foamy-Like Endogenous Retroviruses Are Extensive and Abundant in Teleosts Ryan Ruboyianes1,* and Michael Worobey1,*
Virus Evolution, 2016, 2(2): vew032 doi: 10.1093/ve/vew032 Research article Foamy-like endogenous retroviruses are extensive and abundant in teleosts Ryan Ruboyianes1,* and Michael Worobey1,* 1Department of Ecology and Evolutionary Biology, University of Arizona, 1041 E Lowell St., Tucson, AZ 85721, USA *Corresponding authors: E-mail: [email protected], [email protected] Abstract Recent discoveries indicate that the foamy virus (FV) (Spumavirus) ancestor may have been among the first retroviruses to appear during the evolution of vertebrates, demonstrated by foamy endogenous retroviruses present within deeply diver- gent hosts including mammals, coelacanth, and ray-finned fish. If they indeed existed in ancient marine environments hundreds of millions of years ago, significant undiscovered diversity of foamy-like endogenous retroviruses might be pre- sent in fish genomes. By screening published genomes and by applying PCR-based assays of preserved tissues, we discov- ered 23 novel foamy-like elements in teleost hosts. These viruses form a robust, reciprocally monophyletic sister clade with sarcopterygian host FV, with class III mammal endogenous retroviruses being the sister group to both clades. Some of these foamy-like retroviruses have larger genomes than any known retrovirus, exogenous or endogenous, due to unusually long gag-like genes and numerous accessory genes. The presence of genetic features conserved between mammalian FV and these novel retroviruses attests to a foamy-like replication biology conserved for hundreds of millions of years. We estimate that some of these viruses integrated recently into host genomes; exogenous forms of these viruses may still circulate. Key words: paleovirology, endogenous retrovirus, foamy virus, fish, phylogeny. -
2002.V043.04: to Create Two Subfamilies Within the Family
February 19, 2002 From the Retroviridae Study Group 2002.V043.04: To create two subfamilies within the family Retroviridae, the first one would contain the six genera as previously defined: Alpharetrovirus, Betaretrovirus, Gammaretrovirus, Deltaretrovirus, Epsilonretrovirus and Lentivirus. The second one would contain a single genus, Spumavirus. 2002.V044.04: to name the first subfamily Orthoretrovirinae 2002.V045.04: to name the second subfamily Spumaretrovirinae. 2002.V046.04: To incorporate the genera Alpharetrovirus, Betaretrovirus, Gammaretrovirus, Deltaretrovirus, Epsilonretrovirus and Lentivirus, currently genera of the family Retroviridae, within the new subfamily Spumaretrovirinae. 2002.V047.04: To incorporate the genus Spumavirus, currently a genus of the family Retroviridae, within the new subfamily Spumaretrovirinae. 2002.V048.04: To designate Simian foamy virus as the new type species of the genus Spumavirus instead of Champazee foamy virus, now a strain of the species Simian foamy virus. 2002.V049.04: To incorporate in the species Simian foamy virus, the new type species of the genus Spumavirus the strains Chimpanzee foamy virus, Simian foamy virus 1 and Simian foamy virus 3, previously listed as species in the Spumavirus genus _______________________________ 2002.V043.04: To create two subfamilies within the family Retroviridae, the first one would contain the six genera as previously defined: Alpharetrovirus, Betaretrovirus, Gammaretrovirus, Deltaretrovirus, Epsilonretrovirus and Lentivirus. The second one would contain a single genus, Spumavirus. 2002.V044.04: to name the first subfamily Orthoretrovirinae 2002.V045.04: to name the second subfamily Spumaretrovirinae. Background: The background of this proposal is as follows: The Retroviridae Study Group had proposed in the past to separate the family Retroviridae into two subfamilies, to be called Orthoretrovirinae and the Spumaretrovirinae. -
Post-Entry Blockade of Small Ruminant Lentiviruses by Wild Ruminants
Sanjosé et al. Vet Res (2016) 47:1 DOI 10.1186/s13567-015-0288-7 Veterinary Research RESEARCH ARTICLE Open Access Post‑entry blockade of small ruminant lentiviruses by wild ruminants Leticia Sanjosé1, Helena Crespo1, Laure Blatti‑Cardinaux3, Idoia Glaria1, Carlos Martínez‑Carrasco2, Eduardo Berriatua2, Beatriz Amorena1, Damián De Andrés1, Giuseppe Bertoni3 and Ramses Reina1* Abstract Small ruminant lentivirus (SRLV) infection causes losses in the small ruminant industry due to reduced animal produc‑ tion and increased replacement rates. Infection of wild ruminants in close contact with infected domestic animals has been proposed to play a role in SRLV epidemiology, but studies are limited and mostly involve hybrids between wild and domestic animals. In this study, SRLV seropositive red deer, roe deer and mouflon were detected through modified ELISA tests, but virus was not successfully amplified using a set of different PCRs. Apparent restriction of SRLV infection in cervids was not related to the presence of neutralizing antibodies. In vitro cultured skin fibroblastic cells from red deer and fallow deer were permissive to the SRLV entry and integration, but produced low quantities of virus. SRLV got rapidly adapted in vitro to blood-derived macrophages and skin fibroblastic cells from red deer but not from fallow deer. Thus, although direct detection of virus was not successfully achieved in vivo, these findings show the potential susceptibility of wild ruminants to SRLV infection in the case of red deer and, on the other hand, an in vivo SRLV restriction in fallow deer. Altogether these results may highlight the importance of surveilling and controlling SRLV infection in domestic as well as in wild ruminants sharing pasture areas, and may provide new natural tools to control SRLV spread in sheep and goats. -
Identification of Diverse Full-Length Endogenous Betaretroviruses In
Hayward et al. Retrovirology 2013, 10:35 http://www.retrovirology.com/content/10/1/35 RESEARCH Open Access Identification of diverse full-length endogenous betaretroviruses in megabats and microbats Joshua A Hayward1,2, Mary Tachedjian3†, Jie Cui4†, Hume Field5, Edward C Holmes4,6, Lin-Fa Wang3,7,8 and Gilda Tachedjian1,2,9* Abstract Background: Betaretroviruses infect a wide range of species including primates, rodents, ruminants, and marsupials. They exist in both endogenous and exogenous forms and are implicated in animal diseases such as lung cancer in sheep, and in human disease, with members of the human endogenous retrovirus-K (HERV-K) group of endogenous betaretroviruses (βERVs) associated with human cancers and autoimmune diseases. To improve our understanding of betaretroviruses in an evolutionarily distinct host species, we characterized βERVs present in the genomes and transcriptomes of mega- and microbats, which are an important reservoir of emerging viruses. Results: A diverse range of full-length βERVs were discovered in mega- and microbat genomes and transcriptomes including the first identified intact endogenous retrovirus in a bat. Our analysis revealed that the genus Betaretrovirus can be divided into eight distinct sub-groups with evidence of cross-species transmission. Betaretroviruses are revealed to be a complex retrovirus group, within which one sub-group has evolved from complex to simple genomic organization through the acquisition of an env gene from the genus Gammaretrovirus. Molecular dating suggests that bats have contended with betaretroviral infections for over 30 million years. Conclusions: Our study reveals that a diverse range of betaretroviruses have circulated in bats for most of their evolutionary history, and cluster with extant betaretroviruses of divergent mammalian lineages suggesting that their distribution may be largely unrestricted by host species barriers.