Gastrulation in C. Elegans* Jeremy Nance1,§, Jen-Yi Lee2,§†, Bob Goldstein2,§ 1
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A Damage Sensor Associated with the Cuticle Coordinates Three Core Environmental Stress Responses in Caenorhabditis Elegans
HIGHLIGHTED ARTICLE | INVESTIGATION A Damage Sensor Associated with the Cuticle Coordinates Three Core Environmental Stress Responses in Caenorhabditis elegans William Dodd,*,1 Lanlan Tang,*,1 Jean-Christophe Lone,† Keon Wimberly,* Cheng-Wei Wu,* Claudia Consalvo,* Joni E. Wright,* Nathalie Pujol,†,2 and Keith P. Choe*,2 *Department of Biology, University of Florida, Gainesville, Florida 32611 and †Aix Marseille University, CNRS, INSERM, CIML, Marseille, France ORCID ID: 0000-0001-8889-3197 (N.P.) ABSTRACT Extracellular matrix barriers and inducible cytoprotective genes form successive lines of defense against chemical and microbial environmental stressors. The barrier in nematodes is a collagenous extracellular matrix called the cuticle. In Caenorhabditis elegans, disruption of some cuticle collagen genes activates osmolyte and antimicrobial response genes. Physical damage to the epidermis also activates antimicrobial responses. Here, we assayed the effect of knocking down genes required for cuticle and epidermal integrity on diverse cellular stress responses. We found that disruption of specific bands of collagen, called annular furrows, coactivates detoxification, hyperosmotic, and antimicrobial response genes, but not other stress responses. Disruption of other cuticle structures and epidermal integrity does not have the same effect. Several transcription factors act downstream of furrow loss. SKN-1/ Nrf and ELT-3/GATA are required for detoxification, SKN-1/Nrf is partially required for the osmolyte response, and STA-2/Stat and ELT- 3/GATA for antimicrobial gene expression. Our results are consistent with a cuticle-associated damage sensor that coordinates de- toxification, hyperosmotic, and antimicrobial responses through overlapping, but distinct, downstream signaling. KEYWORDS damage sensor; collagen; detoxification; osmotic stress; antimicrobial response XTRACELLULAR matrices (ECMs) are ubiquitous features Internal and epidermal tissues secrete ECMs as mechanical Eof animal tissues composed of secreted fibrous proteins support. -
A Transparent Window Into Biology: a Primer on Caenorhabditis Elegans* Ann K
A Transparent window into biology: A primer on Caenorhabditis elegans* Ann K. Corsi1§, Bruce Wightman2§, and Martin Chalfie3§ 1Biology Department, The Catholic University of America, Washington, DC 20064 2Biology Department, Muhlenberg College, Allentown, PA 18104 3Department of Biological Sciences, Columbia University, New York, NY 10027 Table of Contents 1. Introduction ............................................................................................................................2 2. C. elegans basics .....................................................................................................................4 2.1. Growth and maintenance ................................................................................................ 4 2.2. Sexual forms and their importance .................................................................................... 5 2.3. Life cycle ....................................................................................................................7 3. C. elegans genetics ...................................................................................................................8 4. Why choose C. elegans? ......................................................................................................... 10 5. C. elegans tissues ................................................................................................................... 11 5.1. Epidermis: a model for extracellular matrix production, wound healing, and cell fusion ............ 12 5.2. Muscles—controlling -
Drosophila Ric-8 Interacts with the Gα12/13 Subunit, Concertina, During Activation of the Folded Gastrulation Pathway
M BoC | ARTICLE Drosophila Ric-8 interacts with the Gα12/13 subunit, Concertina, during activation of the Folded gastrulation pathway Kimberly A. Petersa and Stephen L. Rogersa,b,c aDepartment of Biology and bCarolina Center for Genome Sciences, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599; cLineberger Comprehensive Cancer Center, Chapel Hill, NC 27514 ABSTRACT Heterotrimeric G proteins, composed of α, β, and γ subunits, are activated by Monitoring Editor exchange of GDP for GTP on the Gα subunit. Canonically, Gα is stimulated by the guanine- Denise Montell nucleotide exchange factor (GEF) activity of ligand-bound G protein–coupled receptors. University of California, Santa Barbara However, Gα subunits may also be activated in a noncanonical manner by members of the Ric-8 family, cytoplasmic proteins that also act as GEFs for Gα subunits. We used a signaling Received: Nov 15, 2012 pathway active during Drosophila gastrulation as a model system to study Ric-8/Gα interac- Revised: Jul 18, 2013 Accepted: Aug 28, 2013 tions. A component of this pathway, the Drosophila Gα12/13 subunit, Concertina (Cta), is necessary to trigger actomyosin contractility during gastrulation events. Ric-8 mutants ex- hibit similar gastrulation defects to Cta mutants. Here we use a novel tissue culture system to study a signaling pathway that controls cytoskeletal rearrangements necessary for cellular morphogenesis. We show that Ric-8 regulates this pathway through physical interaction with Cta and preferentially interacts with inactive Cta and directs its localization within the cell. We also use this system to conduct a structure–function analysis of Ric-8 and identify key residues required for both Cta interaction and cellular contractility. -
The Physical Mechanisms of Drosophila Gastrulation: Mesoderm and Endoderm Invagination
| FLYBOOK DEVELOPMENT AND GROWTH The Physical Mechanisms of Drosophila Gastrulation: Mesoderm and Endoderm Invagination Adam C. Martin1 Department of Biology, Massachusetts Institute of Technology, Cambridge, Massachusetts 02142 ORCID ID: 0000-0001-8060-2607 (A.C.M.) ABSTRACT A critical juncture in early development is the partitioning of cells that will adopt different fates into three germ layers: the ectoderm, the mesoderm, and the endoderm. This step is achieved through the internalization of specified cells from the outermost surface layer, through a process called gastrulation. In Drosophila, gastrulation is achieved through cell shape changes (i.e., apical constriction) that change tissue curvature and lead to the folding of a surface epithelium. Folding of embryonic tissue results in mesoderm and endoderm invagination, not as individual cells, but as collective tissue units. The tractability of Drosophila as a model system is best exemplified by how much we know about Drosophila gastrulation, from the signals that pattern the embryo to the molecular components that generate force, and how these components are organized to promote cell and tissue shape changes. For mesoderm invagination, graded signaling by the morphogen, Spätzle, sets up a gradient in transcriptional activity that leads to the expression of a secreted ligand (Folded gastrulation) and a transmembrane protein (T48). Together with the GPCR Mist, which is expressed in the mesoderm, and the GPCR Smog, which is expressed uniformly, these signals activate heterotrimeric G-protein and small Rho-family G-protein signaling to promote apical contractility and changes in cell and tissue shape. A notable feature of this signaling pathway is its intricate organization in both space and time. -
Apical Sarcomere-Like Actomyosin Contracts Nonmuscle Drosophila Epithelial Cells
Apical Sarcomere-like Actomyosin Contracts Nonmuscle Drosophila Epithelial Cells The MIT Faculty has made this article openly available. Please share how this access benefits you. Your story matters. Citation Coravos, Jonathan S., and Adam C. Martin. “Apical Sarcomere- Like Actomyosin Contracts Nonmuscle Drosophila Epithelial Cells.” Developmental Cell 39, no. 3 (November 2016): 346–358. As Published http://dx.doi.org/10.1016/J.DEVCEL.2016.09.023 Publisher Elsevier BV Version Author's final manuscript Citable link http://hdl.handle.net/1721.1/116723 Terms of Use Creative Commons Attribution-NonCommercial-NoDerivs License Detailed Terms http://creativecommons.org/licenses/by-nc-nd/4.0/ HHS Public Access Author manuscript Author ManuscriptAuthor Manuscript Author Dev Cell Manuscript Author . Author manuscript; Manuscript Author available in PMC 2017 November 07. Published in final edited form as: Dev Cell. 2016 November 7; 39(3): 346–358. doi:10.1016/j.devcel.2016.09.023. Apical sarcomere-like actomyosin contracts nonmuscle Drosophila epithelial cells Jonathan S. Coravos1 and Adam C. Martin1 1 Department of Biology, Massachusetts Institute of Technology, Cambridge, MA 02142, USA Summary Actomyosin networks generate contractile force that changes cell and tissue shape. In muscle cells, actin filaments and myosin II appear in a polarized structure called a sarcomere, where myosin II is localized in the center. Nonmuscle cortical actomyosin networks are thought to contract when nonmuscle myosin II (myosin) is activated throughout a mixed-polarity actin network. Here, we identified a mutant version of the myosin-activating kinase, ROCK, that localizes diffusely, rather than centrally, in epithelial cell apices. Surprisingly, this mutant inhibits constriction, suggesting that centrally localized apical ROCK/myosin activity promotes contraction. -
Volume Conservation Principle Involved in Cell Lengthening and Nucleus Movement During Tissue Morphogenesis
Volume conservation principle involved in cell lengthening and nucleus movement during tissue morphogenesis Michael A. Gelbarta,b, Bing Hec, Adam C. Martinc,d, Stephan Y. Thibergea, Eric F. Wieschausc, and Matthias Kaschubea,e,1 aLewis-Sigler Institute for Integrative Genomics, Carl Icahn Laboratory, Princeton University, Princeton, NJ 08544; bGraduate Program in Biophysics, Harvard University, Boston, MA 02115; cDepartment of Molecular Biology, The Howard Hughes Medical Institute, Moffett Laboratory 435, Princeton University, Princeton, NJ 08544; dDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139; and eFrankfurt Institute for Advanced Studies, Faculty of Computer Science and Mathematics, Goethe University, D-60438 Frankfurt am Main, Germany Edited by Thomas D. Pollard, Yale University, New Haven, CT, and approved October 8, 2012 (received for review March 30, 2012) Tissue morphogenesis is the process in which coordinated move- the basal end, resulting in cells of stereotypical columnar shape ments and shape changes of large numbers of cells form tissues, (Fig. 1B, Left). When gastrulation starts, individual cells constrict organs, and the internal body structure. Understanding morphoge- at their apical end and undergo elongation. Cells then shorten and netic movements requires precise measurements of whole-cell shape widen their basal ends, transforming shapes from columnar to changes over time. Tissue folding and invagination are thought to be wedge-like (6, 10–12) (Fig. 1B, Right). Cell nuclei are initially close facilitated by apical constriction, but the mechanism by which to the apical surface but move basally during the early phase of changes near the apical cell surface affect changes along the entire furrow formation (6, 13). -
Web Resources for C. Elegans Studies* §
Web resources for C. elegans studies* § Raymond Lee , Division of Biology, California Institute of Technology, Pasadena, CA 91125, USA Table of Contents 1. Introduction ............................................................................................................................1 2. Portal and knowledge environment .............................................................................................. 2 2.1. WormBase ...................................................................................................................2 2.2. Caenorhabditis elegans WWW Server ..............................................................................3 3. Literature search ...................................................................................................................... 4 3.1. Textpresso ................................................................................................................... 4 3.2. NCBI PubMed ..............................................................................................................5 3.3. Caenorhabditis elegans WWW Server Worm Literature Index ............................................... 5 4. Gene function .........................................................................................................................6 4.1. WormBase Gene Summary ............................................................................................. 6 4.2. NCBI AceView ........................................................................................................... -
GEF-H1 Functions in Apical Constriction and Cell Intercalations
ß 2014. Published by The Company of Biologists Ltd | Journal of Cell Science (2014) 127, 2542–2553 doi:10.1242/jcs.146811 RESEARCH ARTICLE GEF-H1 functions in apical constriction and cell intercalations and is essential for vertebrate neural tube closure Keiji Itoh*, Olga Ossipova* and Sergei Y. Sokol` ABSTRACT 2013). Taken together, these cell behaviors are the main contributors to morphogenetic movements underlying vertebrate Rho family GTPases regulate many morphogenetic processes neurulation. during vertebrate development including neural tube closure. Here One of the crucial regulators of neural tube closure is non- we report a function for GEF-H1/Lfc/ArhGEF2, a RhoA-specific muscle myosin II (Rolo et al., 2009; Tullio et al., 2001). guanine nucleotide exchange factor that functions in neurulation Both intercalatory and constricting cell behaviors require in Xenopus embryos. Morpholino-mediated depletion of GEF-H1 reorganization of many cytoskeletal components and involve resulted in severe neural tube defects, which were rescued by dynamic changes in myosin II localization and activity (Lecuit GEF-H1 RNA. Lineage tracing of GEF-H1 morphants at different et al., 2011; Rauzi et al., 2010; Vicente-Manzanares et al., 2009). developmental stages revealed abnormal cell intercalation and Myosin II controls the contractile force by binding to, and sliding apical constriction, suggesting that GEF-H1 regulates these cell along, actin filaments. Myosin II has also been implicated in behaviors. Molecular marker analysis documented defects in a variety of cellular processes – such as cell junction stability, myosin II light chain (MLC) phosphorylation, Rab11 and F-actin nuclear movement, apical–basal protein targeting – yet there is accumulation in GEF-H1-depleted cells. -
TGF-Β Signaling in C. Elegans * Tina L
TGF-β signaling in C. elegans * Tina L. Gumienny1 and Cathy Savage-Dunn2§ 1Department of Molecular and Cellular Medicine, Texas A&M Health Science Center College of Medicine, College Station, TX 77843 USA 2Department of Biology, Queens College, and the Graduate School and University Center, City University of New York, Flushing, NY 11367 USA Table of Contents 1. Overview ...............................................................................................................................2 2. DBL-1 pathway .......................................................................................................................4 2.1. Body size regulation ...................................................................................................... 5 2.2. Male tail development .................................................................................................... 6 2.3. Innate immunity ............................................................................................................ 6 2.4. Aging and longevity ...................................................................................................... 7 2.5. Mesodermal patterning ................................................................................................... 8 2.6. Chemosensation and neuronal function .............................................................................. 8 2.7. Ligand, receptors, and their modulators ............................................................................. 8 2.8. Intracellular -
Molecular Evolution Inferences from the C. Elegans Genome* Asher D
Molecular evolution inferences from the C. elegans genome* Asher D. Cutter§, Department of Ecology & Evolutionary Biology, University of Toronto, 25 Willcocks St., Toronto, ON, M5S 3B2, Canada Table of Contents 1. Introduction ............................................................................................................................1 2. Mutation ................................................................................................................................2 3. Recombination ........................................................................................................................ 3 4. Natural Selection ..................................................................................................................... 4 5. Genetic Drift ...........................................................................................................................6 6. Population dynamics ................................................................................................................ 7 7. Summary ...............................................................................................................................7 8. Acknowledgements .................................................................................................................. 8 9. References ..............................................................................................................................8 Abstract An understanding of evolution at the molecular level requires the simultaneous -
The Biology of Strongyloides Spp.* Mark E
The biology of Strongyloides spp.* Mark E. Viney1§ and James B. Lok2 1School of Biological Sciences, University of Bristol, Bristol, BS8 1TQ, UK 2Department of Pathobiology, School of Veterinary Medicine, University of Pennsylvania, Philadelphia, PA 19104-6008, USA Table of Contents 1. Strongyloides is a genus of parasitic nematodes ............................................................................. 1 2. Strongyloides infection of humans ............................................................................................... 2 3. Strongyloides in the wild ...........................................................................................................2 4. Phylogeny, morphology and taxonomy ........................................................................................ 4 5. The life-cycle ..........................................................................................................................6 6. Sex determination and genetics of the life-cycle ............................................................................. 8 7. Controlling the life-cycle ........................................................................................................... 9 8. Maintaining the life-cycle ........................................................................................................ 10 9. The parasitic phase of the life-cycle ........................................................................................... 10 10. Life-cycle plasticity ............................................................................................................. -
Cell Non-Autonomy Amplifies Disruption of Neurulation by Mosaic
ARTICLE https://doi.org/10.1038/s41467-021-21372-4 OPEN Cell non-autonomy amplifies disruption of neurulation by mosaic Vangl2 deletion in mice ✉ Gabriel L. Galea 1,2 , Eirini Maniou 1, Timothy J. Edwards1, Abigail R. Marshall1, Ioakeim Ampartzidis 1, Nicholas D. E. Greene 1 & Andrew J. Copp 1 Post-zygotic mutations that generate tissue mosaicism are increasingly associated with severe congenital defects, including those arising from failed neural tube closure. Here we 1234567890():,; report that neural fold elevation during mouse spinal neurulation is vulnerable to deletion of the VANGL planar cell polarity protein 2 (Vangl2) gene in as few as 16% of neuroepithelial cells. Vangl2-deleted cells are typically dispersed throughout the neuroepithelium, and each non-autonomously prevents apical constriction by an average of five Vangl2-replete neigh- bours. This inhibition of apical constriction involves diminished myosin-II localisation on neighbour cell borders and shortening of basally-extending microtubule tails, which are known to facilitate apical constriction. Vangl2-deleted neuroepithelial cells themselves con- tinue to apically constrict and preferentially recruit myosin-II to their apical cell cortex rather than to apical cap localisations. Such non-autonomous effects can explain how post-zygotic mutations affecting a minority of cells can cause catastrophic failure of morphogenesis leading to clinically important birth defects. 1 Developmental Biology and Cancer, UCL GOS Institute of Child Health, London, UK. 2 Comparative Bioveterinary Sciences, Royal Veterinary College, ✉ London, UK. email: [email protected] NATURE COMMUNICATIONS | (2021) 12:1159 | https://doi.org/10.1038/s41467-021-21372-4 | www.nature.com/naturecommunications 1 ARTICLE NATURE COMMUNICATIONS | https://doi.org/10.1038/s41467-021-21372-4 eural tube (NT) defects such as spina bifida continue to as Xenopus neuroepithelium23–26.