An Algorithm to Find Ribbon Disks for Alternating Knots
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The Borromean Rings: a Video About the New IMU Logo
The Borromean Rings: A Video about the New IMU Logo Charles Gunn and John M. Sullivan∗ Technische Universitat¨ Berlin Institut fur¨ Mathematik, MA 3–2 Str. des 17. Juni 136 10623 Berlin, Germany Email: {gunn,sullivan}@math.tu-berlin.de Abstract This paper describes our video The Borromean Rings: A new logo for the IMU, which was premiered at the opening ceremony of the last International Congress. The video explains some of the mathematics behind the logo of the In- ternational Mathematical Union, which is based on the tight configuration of the Borromean rings. This configuration has pyritohedral symmetry, so the video includes an exploration of this interesting symmetry group. Figure 1: The IMU logo depicts the tight config- Figure 2: A typical diagram for the Borromean uration of the Borromean rings. Its symmetry is rings uses three round circles, with alternating pyritohedral, as defined in Section 3. crossings. In the upper corners are diagrams for two other three-component Brunnian links. 1 The IMU Logo and the Borromean Rings In 2004, the International Mathematical Union (IMU), which had never had a logo, announced a competition to design one. The winning entry, shown in Figure 1, was designed by one of us (Sullivan) with help from Nancy Wrinkle. It depicts the Borromean rings, not in the usual diagram (Figure 2) but instead in their tight configuration, the shape they have when tied tight in thick rope. This IMU logo was unveiled at the opening ceremony of the International Congress of Mathematicians (ICM 2006) in Madrid. We were invited to produce a short video [10] about some of the mathematics behind the logo; it was shown at the opening and closing ceremonies, and can be viewed at www.isama.org/jms/Videos/imu/. -
Conservation of Complex Knotting and Slipknotting Patterns in Proteins
Conservation of complex knotting and PNAS PLUS slipknotting patterns in proteins Joanna I. Sułkowskaa,1,2, Eric J. Rawdonb,1, Kenneth C. Millettc, Jose N. Onuchicd,2, and Andrzej Stasiake aCenter for Theoretical Biological Physics, University of California at San Diego, La Jolla, CA 92037; bDepartment of Mathematics, University of St. Thomas, Saint Paul, MN 55105; cDepartment of Mathematics, University of California, Santa Barbara, CA 93106; dCenter for Theoretical Biological Physics , Rice University, Houston, TX 77005; and eCenter for Integrative Genomics, Faculty of Biology and Medicine, University of Lausanne, 1015 Lausanne, Switzerland Edited by* Michael S. Waterman, University of Southern California, Los Angeles, CA, and approved May 4, 2012 (received for review April 17, 2012) While analyzing all available protein structures for the presence of ers fixed configurations, in this case proteins in their native folded knots and slipknots, we detected a strict conservation of complex structures. Then they may be treated as frozen and thus unable to knotting patterns within and between several protein families undergo any deformation. despite their large sequence divergence. Because protein folding Several papers have described various interesting closure pathways leading to knotted native protein structures are slower procedures to capture the knot type of the native structure of and less efficient than those leading to unknotted proteins with a protein or a subchain of a closed chain (1, 3, 29–33). In general, similar size and sequence, the strict conservation of the knotting the strategy is to ensure that the closure procedure does not affect patterns indicates an important physiological role of knots and slip- the inherent entanglement in the analyzed protein chain or sub- knots in these proteins. -
Complete Invariant Graphs of Alternating Knots
Complete invariant graphs of alternating knots Christian Soulié First submission: April 2004 (revision 1) Abstract : Chord diagrams and related enlacement graphs of alternating knots are enhanced to obtain complete invariant graphs including chirality detection. Moreover, the equivalence by common enlacement graph is specified and the neighborhood graph is defined for general purpose and for special application to the knots. I - Introduction : Chord diagrams are enhanced to integrate the state sum of all flype moves and then produce an invariant graph for alternating knots. By adding local writhe attribute to these graphs, chiral types of knots are distinguished. The resulting chord-weighted graph is a complete invariant of alternating knots. Condensed chord diagrams and condensed enlacement graphs are introduced and a new type of graph of general purpose is defined : the neighborhood graph. The enlacement graph is enriched by local writhe and chord orientation. Hence this enhanced graph distinguishes mutant alternating knots. As invariant by flype it is also invariant for all alternating knots. The equivalence class of knots with the same enlacement graph is fully specified and extended mutation with flype of tangles is defined. On this way, two enhanced graphs are proposed as complete invariants of alternating knots. I - Introduction II - Definitions and condensed graphs II-1 Knots II-2 Sign of crossing points II-3 Chord diagrams II-4 Enlacement graphs II-5 Condensed graphs III - Realizability and construction III - 1 Realizability -
THE JONES SLOPES of a KNOT Contents 1. Introduction 1 1.1. The
THE JONES SLOPES OF A KNOT STAVROS GAROUFALIDIS Abstract. The paper introduces the Slope Conjecture which relates the degree of the Jones polynomial of a knot and its parallels with the slopes of incompressible surfaces in the knot complement. More precisely, we introduce two knot invariants, the Jones slopes (a finite set of rational numbers) and the Jones period (a natural number) of a knot in 3-space. We formulate a number of conjectures for these invariants and verify them by explicit computations for the class of alternating knots, the knots with at most 9 crossings, the torus knots and the (−2, 3,n) pretzel knots. Contents 1. Introduction 1 1.1. The degree of the Jones polynomial and incompressible surfaces 1 1.2. The degree of the colored Jones function is a quadratic quasi-polynomial 3 1.3. q-holonomic functions and quadratic quasi-polynomials 3 1.4. The Jones slopes and the Jones period of a knot 4 1.5. The symmetrized Jones slopes and the signature of a knot 5 1.6. Plan of the proof 7 2. Future directions 7 3. The Jones slopes and the Jones period of an alternating knot 8 4. Computing the Jones slopes and the Jones period of a knot 10 4.1. Some lemmas on quasi-polynomials 10 4.2. Computing the colored Jones function of a knot 11 4.3. Guessing the colored Jones function of a knot 11 4.4. A summary of non-alternating knots 12 4.5. The 8-crossing non-alternating knots 13 4.6. -
A Knot-Vice's Guide to Untangling Knot Theory, Undergraduate
A Knot-vice’s Guide to Untangling Knot Theory Rebecca Hardenbrook Department of Mathematics University of Utah Rebecca Hardenbrook A Knot-vice’s Guide to Untangling Knot Theory 1 / 26 What is Not a Knot? Rebecca Hardenbrook A Knot-vice’s Guide to Untangling Knot Theory 2 / 26 What is a Knot? 2 A knot is an embedding of the circle in the Euclidean plane (R ). 3 Also defined as a closed, non-self-intersecting curve in R . 2 Represented by knot projections in R . Rebecca Hardenbrook A Knot-vice’s Guide to Untangling Knot Theory 3 / 26 Why Knots? Late nineteenth century chemists and physicists believed that a substance known as aether existed throughout all of space. Could knots represent the elements? Rebecca Hardenbrook A Knot-vice’s Guide to Untangling Knot Theory 4 / 26 Why Knots? Rebecca Hardenbrook A Knot-vice’s Guide to Untangling Knot Theory 5 / 26 Why Knots? Unfortunately, no. Nevertheless, mathematicians continued to study knots! Rebecca Hardenbrook A Knot-vice’s Guide to Untangling Knot Theory 6 / 26 Current Applications Natural knotting in DNA molecules (1980s). Credit: K. Kimura et al. (1999) Rebecca Hardenbrook A Knot-vice’s Guide to Untangling Knot Theory 7 / 26 Current Applications Chemical synthesis of knotted molecules – Dietrich-Buchecker and Sauvage (1988). Credit: J. Guo et al. (2010) Rebecca Hardenbrook A Knot-vice’s Guide to Untangling Knot Theory 8 / 26 Current Applications Use of lattice models, e.g. the Ising model (1925), and planar projection of knots to find a knot invariant via statistical mechanics. Credit: D. Chicherin, V.P. -
CROSSING CHANGES and MINIMAL DIAGRAMS the Unknotting
CROSSING CHANGES AND MINIMAL DIAGRAMS ISABEL K. DARCY The unknotting number of a knot is the minimal number of crossing changes needed to convert the knot into the unknot where the minimum is taken over all possible diagrams of the knot. For example, the minimal diagram of the knot 108 requires 3 crossing changes in order to change it to the unknot. Thus, by looking only at the minimal diagram of 108, it is clear that u(108) ≤ 3 (figure 1). Nakanishi [5] and Bleiler [2] proved that u(108) = 2. They found a non-minimal diagram of the knot 108 in which two crossing changes suffice to obtain the unknot (figure 2). Lower bounds on unknotting number can be found by looking at how knot invariants are affected by crossing changes. Nakanishi [5] and Bleiler [2] used signature to prove that u(108)=2. Figure 1. Minimal dia- Figure 2. A non-minimal dia- gram of knot 108 gram of knot 108 Bernhard [1] noticed that one can determine that u(108) = 2 by using a sequence of crossing changes within minimal diagrams and ambient isotopies as shown in figure. A crossing change within the minimal diagram of 108 results in the knot 62. We then use an ambient isotopy to change this non-minimal diagram of 62 to a minimal diagram. The unknot can then be obtained by changing one crossing within the minimal diagram of 62. Bernhard hypothesized that the unknotting number of a knot could be determined by only looking at minimal diagrams by using ambient isotopies between crossing changes. -
Knots: a Handout for Mathcircles
Knots: a handout for mathcircles Mladen Bestvina February 2003 1 Knots Informally, a knot is a knotted loop of string. You can create one easily enough in one of the following ways: • Take an extension cord, tie a knot in it, and then plug one end into the other. • Let your cat play with a ball of yarn for a while. Then find the two ends (good luck!) and tie them together. This is usually a very complicated knot. • Draw a diagram such as those pictured below. Such a diagram is a called a knot diagram or a knot projection. Trefoil and the figure 8 knot 1 The above two knots are the world's simplest knots. At the end of the handout you can see many more pictures of knots (from Robert Scharein's web site). The same picture contains many links as well. A link consists of several loops of string. Some links are so famous that they have names. For 2 2 3 example, 21 is the Hopf link, 51 is the Whitehead link, and 62 are the Bor- romean rings. They have the feature that individual strings (or components in mathematical parlance) are untangled (or unknotted) but you can't pull the strings apart without cutting. A bit of terminology: A crossing is a place where the knot crosses itself. The first number in knot's \name" is the number of crossings. Can you figure out the meaning of the other number(s)? 2 Reidemeister moves There are many knot diagrams representing the same knot. For example, both diagrams below represent the unknot. -
A Remarkable 20-Crossing Tangle Shalom Eliahou, Jean Fromentin
A remarkable 20-crossing tangle Shalom Eliahou, Jean Fromentin To cite this version: Shalom Eliahou, Jean Fromentin. A remarkable 20-crossing tangle. 2016. hal-01382778v2 HAL Id: hal-01382778 https://hal.archives-ouvertes.fr/hal-01382778v2 Preprint submitted on 16 Jan 2017 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. A REMARKABLE 20-CROSSING TANGLE SHALOM ELIAHOU AND JEAN FROMENTIN Abstract. For any positive integer r, we exhibit a nontrivial knot Kr with r− r (20·2 1 +1) crossings whose Jones polynomial V (Kr) is equal to 1 modulo 2 . Our construction rests on a certain 20-crossing tangle T20 which is undetectable by the Kauffman bracket polynomial pair mod 2. 1. Introduction In [6], M. B. Thistlethwaite gave two 2–component links and one 3–component link which are nontrivial and yet have the same Jones polynomial as the corre- sponding unlink U 2 and U 3, respectively. These were the first known examples of nontrivial links undetectable by the Jones polynomial. Shortly thereafter, it was shown in [2] that, for any integer k ≥ 2, there exist infinitely many nontrivial k–component links whose Jones polynomial is equal to that of the k–component unlink U k. -
Introduction to Vassiliev Knot Invariants First Draft. Comments
Introduction to Vassiliev Knot Invariants First draft. Comments welcome. July 20, 2010 S. Chmutov S. Duzhin J. Mostovoy The Ohio State University, Mansfield Campus, 1680 Univer- sity Drive, Mansfield, OH 44906, USA E-mail address: [email protected] Steklov Institute of Mathematics, St. Petersburg Division, Fontanka 27, St. Petersburg, 191011, Russia E-mail address: [email protected] Departamento de Matematicas,´ CINVESTAV, Apartado Postal 14-740, C.P. 07000 Mexico,´ D.F. Mexico E-mail address: [email protected] Contents Preface 8 Part 1. Fundamentals Chapter 1. Knots and their relatives 15 1.1. Definitions and examples 15 § 1.2. Isotopy 16 § 1.3. Plane knot diagrams 19 § 1.4. Inverses and mirror images 21 § 1.5. Knot tables 23 § 1.6. Algebra of knots 25 § 1.7. Tangles, string links and braids 25 § 1.8. Variations 30 § Exercises 34 Chapter 2. Knot invariants 39 2.1. Definition and first examples 39 § 2.2. Linking number 40 § 2.3. Conway polynomial 43 § 2.4. Jones polynomial 45 § 2.5. Algebra of knot invariants 47 § 2.6. Quantum invariants 47 § 2.7. Two-variable link polynomials 55 § Exercises 62 3 4 Contents Chapter 3. Finite type invariants 69 3.1. Definition of Vassiliev invariants 69 § 3.2. Algebra of Vassiliev invariants 72 § 3.3. Vassiliev invariants of degrees 0, 1 and 2 76 § 3.4. Chord diagrams 78 § 3.5. Invariants of framed knots 80 § 3.6. Classical knot polynomials as Vassiliev invariants 82 § 3.7. Actuality tables 88 § 3.8. Vassiliev invariants of tangles 91 § Exercises 93 Chapter 4. -
CALIFORNIA STATE UNIVERSITY, NORTHRIDGE P-Coloring Of
CALIFORNIA STATE UNIVERSITY, NORTHRIDGE P-Coloring of Pretzel Knots A thesis submitted in partial fulfillment of the requirements for the degree of Master of Science in Mathematics By Robert Ostrander December 2013 The thesis of Robert Ostrander is approved: |||||||||||||||||| |||||||| Dr. Alberto Candel Date |||||||||||||||||| |||||||| Dr. Terry Fuller Date |||||||||||||||||| |||||||| Dr. Magnhild Lien, Chair Date California State University, Northridge ii Dedications I dedicate this thesis to my family and friends for all the help and support they have given me. iii Acknowledgments iv Table of Contents Signature Page ii Dedications iii Acknowledgements iv Abstract vi Introduction 1 1 Definitions and Background 2 1.1 Knots . .2 1.1.1 Composition of knots . .4 1.1.2 Links . .5 1.1.3 Torus Knots . .6 1.1.4 Reidemeister Moves . .7 2 Properties of Knots 9 2.0.5 Knot Invariants . .9 3 p-Coloring of Pretzel Knots 19 3.0.6 Pretzel Knots . 19 3.0.7 (p1, p2, p3) Pretzel Knots . 23 3.0.8 Applications of Theorem 6 . 30 3.0.9 (p1, p2, p3, p4) Pretzel Knots . 31 Appendix 49 v Abstract P coloring of Pretzel Knots by Robert Ostrander Master of Science in Mathematics In this thesis we give a brief introduction to knot theory. We define knot invariants and give examples of different types of knot invariants which can be used to distinguish knots. We look at colorability of knots and generalize this to p-colorability. We focus on 3-strand pretzel knots and apply techniques of linear algebra to prove theorems about p-colorability of these knots. -
Alexander Polynomial, Finite Type Invariants and Volume of Hyperbolic
ISSN 1472-2739 (on-line) 1472-2747 (printed) 1111 Algebraic & Geometric Topology Volume 4 (2004) 1111–1123 ATG Published: 25 November 2004 Alexander polynomial, finite type invariants and volume of hyperbolic knots Efstratia Kalfagianni Abstract We show that given n > 0, there exists a hyperbolic knot K with trivial Alexander polynomial, trivial finite type invariants of order ≤ n, and such that the volume of the complement of K is larger than n. This contrasts with the known statement that the volume of the comple- ment of a hyperbolic alternating knot is bounded above by a linear function of the coefficients of the Alexander polynomial of the knot. As a corollary to our main result we obtain that, for every m> 0, there exists a sequence of hyperbolic knots with trivial finite type invariants of order ≤ m but ar- bitrarily large volume. We discuss how our results fit within the framework of relations between the finite type invariants and the volume of hyperbolic knots, predicted by Kashaev’s hyperbolic volume conjecture. AMS Classification 57M25; 57M27, 57N16 Keywords Alexander polynomial, finite type invariants, hyperbolic knot, hyperbolic Dehn filling, volume. 1 Introduction k i Let c(K) denote the crossing number and let ∆K(t) := Pi=0 cit denote the Alexander polynomial of a knot K . If K is hyperbolic, let vol(S3 \ K) denote the volume of its complement. The determinant of K is the quantity det(K) := |∆K(−1)|. Thus, in general, we have k det(K) ≤ ||∆K (t)|| := X |ci|. (1) i=0 It is well know that the degree of the Alexander polynomial of an alternating knot equals twice the genus of the knot. -
Splitting Numbers of Links
Splitting numbers of links Jae Choon Cha, Stefan Friedl, and Mark Powell Department of Mathematics, POSTECH, Pohang 790{784, Republic of Korea, and School of Mathematics, Korea Institute for Advanced Study, Seoul 130{722, Republic of Korea E-mail address: [email protected] Mathematisches Institut, Universit¨atzu K¨oln,50931 K¨oln,Germany E-mail address: [email protected] D´epartement de Math´ematiques,Universit´edu Qu´ebec `aMontr´eal,Montr´eal,QC, Canada E-mail address: [email protected] Abstract. The splitting number of a link is the minimal number of crossing changes between different components required, on any diagram, to convert it to a split link. We introduce new techniques to compute the splitting number, involving covering links and Alexander invariants. As an application, we completely determine the splitting numbers of links with 9 or fewer crossings. Also, with these techniques, we either reprove or improve upon the lower bounds for splitting numbers of links computed by J. Batson and C. Seed using Khovanov homology. 1. Introduction Any link in S3 can be converted to the split union of its component knots by a sequence of crossing changes between different components. Following J. Batson and C. Seed [BS13], we define the splitting number of a link L, denoted by sp(L), as the minimal number of crossing changes in such a sequence. We present two new techniques for obtaining lower bounds for the splitting number. The first approach uses covering links, and the second method arises from the multivariable Alexander polynomial of a link. Our general covering link theorem is stated as Theorem 3.2.