Comments on the Taxonomy of the Three-Spined Stickleback, Gasterosteus Aculeatus Linnaeus1
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Fresh- and Brackish-Water Cold-Tolerant Species of Southern Europe: Migrants from the Paratethys That Colonized the Arctic
water Review Fresh- and Brackish-Water Cold-Tolerant Species of Southern Europe: Migrants from the Paratethys That Colonized the Arctic Valentina S. Artamonova 1, Ivan N. Bolotov 2,3,4, Maxim V. Vinarski 4 and Alexander A. Makhrov 1,4,* 1 A. N. Severtzov Institute of Ecology and Evolution, Russian Academy of Sciences, 119071 Moscow, Russia; [email protected] 2 Laboratory of Molecular Ecology and Phylogenetics, Northern Arctic Federal University, 163002 Arkhangelsk, Russia; [email protected] 3 Federal Center for Integrated Arctic Research, Russian Academy of Sciences, 163000 Arkhangelsk, Russia 4 Laboratory of Macroecology & Biogeography of Invertebrates, Saint Petersburg State University, 199034 Saint Petersburg, Russia; [email protected] * Correspondence: [email protected] Abstract: Analysis of zoogeographic, paleogeographic, and molecular data has shown that the ancestors of many fresh- and brackish-water cold-tolerant hydrobionts of the Mediterranean region and the Danube River basin likely originated in East Asia or Central Asia. The fish genera Gasterosteus, Hucho, Oxynoemacheilus, Salmo, and Schizothorax are examples of these groups among vertebrates, and the genera Magnibursatus (Trematoda), Margaritifera, Potomida, Microcondylaea, Leguminaia, Unio (Mollusca), and Phagocata (Planaria), among invertebrates. There is reason to believe that their ancestors spread to Europe through the Paratethys (or the proto-Paratethys basin that preceded it), where intense speciation took place and new genera of aquatic organisms arose. Some of the forms that originated in the Paratethys colonized the Mediterranean, and overwhelming data indicate that Citation: Artamonova, V.S.; Bolotov, representatives of the genera Salmo, Caspiomyzon, and Ecrobia migrated during the Miocene from I.N.; Vinarski, M.V.; Makhrov, A.A. -
Indiana Aquatic Nuisance Species (ANS) Management Plan
Indiana Aquatic Nuisance Species (ANS) Management Plan Aruana caught by angler in Lake George, Lake County, Indiana Photo credit: Brian Breidert, IDNR Indiana Department of Natural Resources Funded by: Division of Fish and Wildlife Edited by: Phil Seng and Gwen White, D.J. Case & Associates, Mishawaka, Indiana October 1, 2003 Indiana Aquatic Nuisance Species (ANS) Management Plan Table of Contents Page Executive summary 3 Introduction 6 Why should we be concerned? 6 Why are we hearing about more nuisance exotics? 6 Are all exotic species causing problems? 7 Why do some of these species become nuisances? 7 What principles should guide invasive species management in Indiana? 8 Which species are top priorities for management in Indiana? 8 Table 1. Aquatic nuisance species on the watch list and detected 9 Nuisance fish 10 Nuisance insects and crustaceans 13 Nuisance mussels and snails 14 Diseases, pathogens and parasites 15 Aquarium pets caught from Indiana waters 17 Nuisance plants 20 Which programs are engaged in management of invasive species? 23 What regulatory authorities control management of exotic species? 29 Federal role 30 Regional role 32 State role 33 Designing an integrated comprehensive regulatory approach 33 What can Hoosiers do to prevent and control the impacts of ANS? 40 Index to the strategic management plan 41 Description of strategic management plan 44 How will we know if we succeed? 58 Literature cited 60 Glossary of terms 63 List of agency and organization acronyms 64 Appendix A. List of introduced fish and crayfish 65 Appendix B. List of invasive aquatic plants 67 Appendix C. Priority list of ANS in the Great Lakes basin 69 Appendix D. -
Parallel Genetic Origins of Pelvic Reduction in Vertebrates
Parallel genetic origins of pelvic reduction in vertebrates Michael D. Shapiro*†‡, Michael A. Bell§, and David M. Kingsley*‡¶ *Department of Developmental Biology and ‡Howard Hughes Medical Institute, Stanford University School of Medicine, Stanford, CA 94305; and §Department of Ecology and Evolution, Stony Brook University, Stony Brook, NY 11794 Edited by David B. Wake, University of California, Berkeley, CA, and approved July 23, 2006 (received for review June 6, 2006) Despite longstanding interest in parallel evolution, little is known of the pelvic girdle occurs in several derived freshwater popu- about the genes that control similar traits in different lineages of lations throughout the circumpolar distribution of threespine vertebrates. Pelvic reduction in stickleback fish (family Gasterostei- and ninespine sticklebacks, likely as an adaptive response to dae) provides a striking example of parallel evolution in a genet- reduced piscine predator loads and͞or water chemistry (Fig. 1b) ically tractable system. Previous studies suggest that cis-acting (9, 19–25). Pelvic reduction evolved in parallel among freshwater regulatory changes at the Pitx1 locus control pelvic reduction in a populations within each genus no longer than 10,000–20,000 population of threespine sticklebacks (Gasterosteus aculeatus). In years ago, at the end of the last glacial period when marine this study, progeny from intergeneric crosses between pelvic- sticklebacks began to colonize new freshwater habitats (26). In reduced threespine and ninespine (Pungitius pungitius) stickle- contrast, the most recent common ancestor of threespine and backs also showed severe pelvic reduction, implicating a similar ninespine sticklebacks lived at least 10 million years ago, based genetic origin for this trait in both genera. -
The Adaptive Significance of Dorsal Spine Variation in the Fourspine Stickleback, Apeltes Quadracus
Heredity (1984),53(2), 383—396 1984. The Genetical Society of Great Britain THEADAPTIVE SIGNIFICANCE OF DORSAL SPINE VARIATION IN THE FOURSPINE STICKLEBACK, APELTES QUADRACUS. IV. PHENOTYPIC COVARIATION WITH CLOSELY RELATED SPECIES 0. M. BLOUW* AND 0. W. HAGEN Department of Biology, University of New Brunswick, Fredericton, New Brunswick, Canada E3B6EI Received2.xii.83 SUMMARY The fourspine stickleback (Apeltes quadracus) and ninespine stickleback (Pungitiuspungitius)have similar ecologies, they often coexist, and they share parallel polymorphisms for the number of dorsal spines. Spine number is posi- tively correlated between them for 86 sites in eastern Canada. Dorsal spine length is positively correlated with spine number within each species, and spine length is positively correlated between them. Spine length for both species is also positively correlated with the presence of predatory fishes and negatively corre- lated with vegetation cover. Finally, spine number for both Apeltes and Pungirius is lower where they coexist with a new species of stickleback (Gasterosteus sp.) which is found only in environments where predation risk is low. These patterns of covariation within and between species are evidence for natural selection, and they suggest that predators are a selective agent favouring the higher-spined morphs. We discuss these results with respect to the idea that geographic variation in Pun gidus reflects historical processes of isolation and differentiation during the Pleistocene era. 1. INTRODUCTION A powerful method for detecting the action of natural selection is to search for covariation among homologous polymorphic traits in closely related and ecologically similar species where they coexist (Clarke, 1975; Koehn and Mitton, 1972; Turner 1977). -
Complete Mitochondrial Genome of the Greek Nine-Spined Stickleback Pungitius Hellenicus (Gasterosteiformes, Gasterosteidae)
Mitochondrial DNA Part B Resources ISSN: (Print) 2380-2359 (Online) Journal homepage: http://www.tandfonline.com/loi/tmdn20 Complete mitochondrial genome of the Greek nine-spined stickleback Pungitius hellenicus (Gasterosteiformes, Gasterosteidae) Takahito Shikano, Baocheng Guo, Jasna Vukić, Radek Šanda & Juha Merilä To cite this article: Takahito Shikano, Baocheng Guo, Jasna Vukić, Radek Šanda & Juha Merilä (2016) Complete mitochondrial genome of the Greek nine-spined stickleback Pungitius hellenicus (Gasterosteiformes, Gasterosteidae), Mitochondrial DNA Part B, 1:1, 66-67, DOI: 10.1080/23802359.2015.1137826 To link to this article: http://dx.doi.org/10.1080/23802359.2015.1137826 © 2016 The Author(s). Published by Taylor & Published online: 01 Feb 2016. Francis. Submit your article to this journal Article views: 563 View related articles View Crossmark data Citing articles: 1 View citing articles Full Terms & Conditions of access and use can be found at http://www.tandfonline.com/action/journalInformation?journalCode=tmdn20 Download by: [University of Helsinki] Date: 01 February 2017, At: 01:59 MITOCHONDRIAL DNA PART B: RESOURCES, 2016 VOL. 1, NO. 1, 66–67 http://dx.doi.org/10.1080/23802359.2015.1137826 MITOGENOME ANNOUNCEMENTS Complete mitochondrial genome of the Greek nine-spined stickleback Pungitius hellenicus (Gasterosteiformes, Gasterosteidae) Takahito Shikanoa, Baocheng Guoa, Jasna Vukic´b, Radek Sandac and Juha Meril€aa aEcological Genetics Research Unit, Department of Biosciences, University of Helsinki, Helsinki, Finland; bDepartment of Ecology, Faculty of Science, Charles University of Prague, Prague, Czech Republic; cDepartment of Zoology, National Museum, Prague, Czech Republic ABSTRACT ARTICLE HISTORY The complete mitochondrial genome of the Greek nine-spined stickleback Pungitius hellenicus was Received 8 December 2015 obtained using Illumina high-throughput sequencing of genomic DNA. -
The World's Forgotten Fishes
THE WORLD’S FORGOTTEN FISHES CONTENTS FOREWORD 4 1. INTRODUCTION 6 2. DAZZLING DIVERSITY 10 3. HEALTHY FRESHWATER FISHERIES = 16 HEALTHY RIVERS, LAKES & WETLANDS 4. WILD FRESHWATER FISHERIES ARE PRICELESS 18 5. FISHING FOR FUN… IS BIG BUSINESS 26 6. THE WORLD’S MOST POPULAR PETS 30 7. HUMANITY’S FRESHWATER HERITAGE 34 8. FRESHWATER FISH IN FREEFALL 36 9. 80 SPECIES EXTINCT 40 Lead Author: Kathy Hughes 10. A BRIGHTER FUTURE FOR FRESHWATER FISHES 42 WWF wish to thank collaborators Ian Harrison, Will Darwall, Richard Lee, Dean Muruven, Carmen Revenga, Julie Claussen, Abby Lynch, Adrian Pinder, Robin Abell, Paula Martinelli, Mike Baltzer, Michele Thieme, Sonja Jähnig, Jeff Opperman, Herman Wanningen, Jeremy Monroe and Harmony Patricio for their support in writing this report. Furthermore, we wish to thank experts Richard van der Laan, Tim Lyons, Paul Van Damme, Mark Owen, Hannah Rudd, Joao Campos-Silva, Leandro Castello, Vidyadhar Atkore, Thadoe Wai, Simon Funge-Smith, John Jorgensen, Naren Sreenivisan, Mark Lloyd, Arlin Rickard and Matt Gollock for their support with individual case studies. About this report and its collaborators Promoting thriving populations of freshwater fishes and the ecosystems within which they thrive is a priority for WWF Publishing office: WWF International and the 15 organisations and alliances that Cover photography © Karine Aigner / WWF-US produced this report. Design by Lou Clements © 1986 Panda symbol WWF – World Wide Fund For Nature (Formerly World Wildlife Fund) ® “WWF” is a WWF Registered Trademark. WWF -
Complete Mitochondrial Genome of the Nine-Spined Stickleback Pungitius Pungitius (Gasterosteiformes, Gasterosteidae)
Mitochondrial DNA Part B Resources ISSN: (Print) 2380-2359 (Online) Journal homepage: https://www.tandfonline.com/loi/tmdn20 Complete mitochondrial genome of the nine-spined stickleback Pungitius pungitius (Gasterosteiformes, Gasterosteidae) Baocheng Guo, Elisavet-Aspasia Toli & Juha Merilä To cite this article: Baocheng Guo, Elisavet-Aspasia Toli & Juha Merilä (2016) Complete mitochondrial genome of the nine-spined stickleback Pungitiuspungitius (Gasterosteiformes, Gasterosteidae), Mitochondrial DNA Part B, 1:1, 72-73, DOI: 10.1080/23802359.2015.1137829 To link to this article: https://doi.org/10.1080/23802359.2015.1137829 © 2016 The Author(s). Published by Taylor & Francis. Published online: 01 Feb 2016. Submit your article to this journal Article views: 491 View related articles View Crossmark data Citing articles: 1 View citing articles Full Terms & Conditions of access and use can be found at https://www.tandfonline.com/action/journalInformation?journalCode=tmdn20 MITOCHONDRIAL DNA PART B: RESOURCES, 2016 VOL. 1, NO. 1, 72–73 http://dx.doi.org/10.1080/23802359.2015.1137829 MITOGENOME ANNOUNCEMENT Complete mitochondrial genome of the nine-spined stickleback Pungitius pungitius (Gasterosteiformes, Gasterosteidae) Baocheng Guoa, Elisavet-Aspasia Tolia,b and Juha Meril€aa aDepartment of Biosciences, Ecological Genetics Research Unit, University of Helsinki, Helsinki, Finland; bDepartment of Biological Application & Technology, University of Ioannina, Greece ABSTRACT ARTICLE HISTORY The complete mitochondrial genome of the nine-spined stickleback Pungitius pungitius was obtained Received 8 December 2015 with Illumina sequencing of genomic DNA. The assembled mitogenome sequence was 16 582 bp long, Accepted 22 December 2015 and the gene number, order and contents were identical to those of other sequenced Pungitius mitoge- nomes. -
A High-Quality Assembly of the Nine-Spined Stickleback (Pungitius Pungitius) Genome
Zurich Open Repository and Archive University of Zurich Main Library Strickhofstrasse 39 CH-8057 Zurich www.zora.uzh.ch Year: 2019 A high-quality assembly of the nine-spined stickleback (Pungitius pungitius) genome Varadharajan, Srinidhi ; Rastas, Pasi ; Löytynoja, Ari ; Matschiner, Michael ; Calboli, Federico C F ; Guo, Baocheng ; Nederbragt, Alexander J ; Jakobsen, Kjetill S ; Merilä, Juha Abstract: The Gasterosteidae fish family hosts several species that are important models for eco- evolutionary, genetic and genomic research. In particular, a wealth of genetic and genomic data has been generated for the three-spined stickleback (Gasterosteus aculeatus), the ‘ecology’s supermodel’, while the genomic resources for the nine-spined stickleback (Pungitius pungitius) have remained relatively scarce. Here, we report a high-quality chromosome-level genome assembly of P. pungitius consisting of 5,303 con- tigs (N50 = 1.2 Mbp) with a total size of 521 Mbp. These contigs were mapped to 21 linkage groups using a high-density linkage map, yielding a final assembly with 98.5% BUSCO completeness. A total of 25,062 protein-coding genes were annotated, and ca. 23% of the assembly was found to consist of repetitive el- ements. A comprehensive analysis of repetitive elements uncovered centromeric-specific tandem repeats and provided insights into the evolution of retrotransposons. A multigene phylogenetic analysis inferred a divergence time of about 26 million years (MYA) between nine- and three-spined sticklebacks, which is far older than the commonly assumed estimate of 13 MYA. Compared to the three-spined stickleback, we identified an additional duplication of several genes in the hemoglobin cluster. Sequencing datafrom populations adapted to different environments indicated potential copy number variations in hemoglobin genes. -
Gasterosteidae
FAMILY Gasterosteidae Bonaparte, 1831 – sticklebacks GENUS Apeltes DeKay, 1842 - sticklebacks Species Apeltes quadracus (Mitchill, 1815) - fourspine stickleback [=apeltes, millepunctatus] GENUS Culaea Whitley, 1950 - sticklebacks [=Eucalia] Species Culaea inconstans (Kirtland, 1840) - brook stickleback [=cayuga, gymnetes, micropus, pygmaeus] GENUS Gasterosteus Linnaeus, 1758 - sticklebacks [=Gasteracanthus, Gladiunculus, Leiurus, Obolarius] Species Gasterosteus aculeatus Linnaeus, 1758 - threespined stickleback [=algeriensis, argentatissimus, argyropomus, atkinsii, bailloni, biaculeatus, biarmatus, bispinosus, brachycentrus, cataphractus, cuvieri, dekayi, dimidiatus, elegans, gymnurus, hologymnus, inopinatus, insculptus, intermedius, japonicus, leiurus, loricatus, messinicus, microcephalus, nemausensis, neoboracensis, neustrianus, niger, noveboracensis, obolarius, plebeius, ponticus, pugetti, quadrispinosa, santaennae, semiarmatus, semiloricatus, serratus, spinulosus, suppositus, teraculeatus, tetracanthus, texanus, trachurus, williamsoni] Species Gasterosteus crenobiontus Bacescu & Mayer, 1956 - Techirghiol stickleback Species Gasterosteus islandicus Sauvage, 1874 - Iceland stickleback Species Gasterosteus nipponicus Higuchi et al., 2014 - Higuchi's stickleback Species Gasterosteus wheatlandi Putnam, 1867 - blackspotted stickleback [=gladiunculus] GENUS Pungitius Coste, 1848 - sticklebacks [=Gasterostea, Pygosteus] Species Pungitius bussei (Warpachowski, in Warpachowski & Herzenstein, 1888) – Busse's stickleback Species Pungitius hellenicus -
Morphological Characteristics of Three Rare Freshwater Populations of the Stickleback, Gasterosteus Aculeatus Aculeatus (Teleostei, Gasterosteidae)
Bull. Natl. Mus. Nat. Sci., Ser. A, 45(4), pp. 135–143, November 22, 2019 Morphological Characteristics of Three Rare Freshwater Populations of the Stickleback, Gasterosteus aculeatus aculeatus (Teleostei, Gasterosteidae) Harumi Sakai1, Yasuhide Kodera2 and Taka-aki Sameshima2 1Department of Applied Aquabiology, National Fisheries University, 2–7–1 Nagata-honmachi, Shimonoseki, Yamaguchi 759–6595, Japan E-mail: sakaih@fish-u.ac.jp 2Alumnus, National Fisheries University, 2–7–1 Nagata-honmachi, Shimonoseki, Yamaguchi 759–6595, Japan (Received 9 August 2019; accepted 25 September 2019) Abstract Morphological characteristics of three rare freshwater populations of Gasterosteus aculeatus aculeatus (Paramushir population from the Kuril Islands, Ohtsuchi population from Iwate Prefecture and Okanjichi population from Tochigi Prefecture) are demonstrated for the first time, from museum specimens. The Paramushir population, with partially armored lateral plates, is thought to represent an ancient freshwater resident lineage, whereas the Ohtsuchi population, with fully armored lateral plates, numerous vertebrae and a relatively larger body, has possibly become a freshwater population comparatively recently. The Okanjichi population, also with fully armored lateral plates, differed from the closest Chikazono population in the same river system, the latter exhibiting a considerable lateral plate variation, from partially to fully armored. These populations, representing very important morphological diversity, should be accorded high conservation status in the future. Key words : Threespine stickleback, Freshwater resident, Morphology, Lateral plate, Conserva- tion, Natural monument. base, and two soft rays (vs. one cusp and one soft Introduction ray in the latter) (Scott and Crossman, 1973). The threespine stickleback genus Gasteros- Gasterosteus nipponicus differs from G. aculea- teus, including G. aculeatus Linnaeus, 1758 tus in having the lateral plates abruptly reducing (type species), G. -
Three Cheers for the Three-Spined Stickleback Kathleen Heng, Abbey Thompson, David Chu & David M
MODEL OF THE MONTH Three cheers for the three-spined stickleback Kathleen Heng, Abbey Thompson, David Chu & David M. Kingsley Research résumé SCIENTIFIC NAME Scientists have selected three-spined stickleback as a model for Gasterosteus aculeatus ecological and genetics research in part because the species has TAXONOMY undergone one of the most recent and dramatic evolutionary radia- PHYLUM: Chordata tions on earth. Different forms show striking changes in size, body CLASS: Actinopterygii armor, teeth, craniofacial structures, dorsal spines, pelvic develop- ment, pigmentation, salt handling, parasite resistance, social and ORDER: Gasterosteiformes reproductive behavior, and many life history traits1. Despite these FAMILY: Gasterosteidae major morphological and physiological differences, many recently evolved populations can still be crossed, making it possible to map particular chromosome regions that control interesting pheno- General description typic differences2. The three-spined stickleback genome has been Three-spined sticklebacks are small bony fish that have prominent sequenced, facilitating the study of chromosome regions and genes spines for protection against predators. The fish occupies widespread that contribute to phenotypic differences3. Researchers have also habitats and can be found in both marine and freshwater parts of the developed methods for adding and removing genes in sticklebacks, Northern hemisphere1. Since the end of the last Ice Age, marine stick- making it possible to transfer traits and confirm the effects of par- lebacks have colonized many new freshwater lakes and streams ticular genes and mutations2. in formerly glaciated regions. This recent adap- The diversity of fossil and living stickleback popu- tation in response to dramatic ecological lations adds to the value of these fish as an change has recurred in many locations evolutionary, ecological, and environ- within 10-20,000,000 years. -
Our Home and Native Land: Canadian Species of Global Conservation Concern
Our Home and Native Land Canadian Species of Global Conservation Concern NatureServe Canada contributes to the conservation of Canada’s biodiversity by providing scientific data and expertise about species and ecosystems of conservation concern to support decision-making, research, and education. Citation: Cannings, S., M. Anions, R. Rainer, and B. Stein. 2005. Our Home and Native Land: Canadian Species of Global Conservation Concern. NatureServe Canada: Ottawa, Ontario. © NatureServe Canada 2005 ISBN 0-9711053-4-0 Primary funding for the publication of this report was provided by the Suncor Energy Foundation. This report is also available in French. To request a copy, please contact NatureServe Canada. NatureServe Canada 960 Carling Avenue Ottawa, Ontario K1A 0C6 613-759-1861 www.natureserve-canada.ca Our Home and Native Land Canadian Species of Global Conservation Concern by Sydney Cannings Marilyn F. E. Anions Rob Rainer Bruce A. Stein Sydney Cannings NatureServe Yukon Fish and Wildlife Branch Yukon Department of the Environment P.O. Box 2703 Whitehorse, Yukon Y1A 2C6 867-667-3684 Marilyn F. E. Anions NatureServe Canada 960 Carling Avenue Ottawa, Ontario K1A 0C6 Note on Captions: For each species, captions state the range in Canada only, as well as the NatureServe global conservation status. 613-759-1942 Rob Rainer Front Cover Chelsea, Québec Left to right: Steller sea lions (Eumetopias jubatus). Vulnerable (G3). 819-827-9082 British Columbia. / Photo by Jared Hobbs. Golden paintbrush (Castilleja levisecta). Critically imperiled (G1). British Bruce A. Stein, Ph.D. Columbia. / Photo by Leah Ramsay, British Columbia Conservation Data NatureServe Centre. 1101 Wilson Blvd., 15th Floor Spotted owl (Strix occidentalis).